>TIGR00700 GABAtrnsam 4-aminobutyrate transaminase; InterPro: IPR004632 Eukaryotic 4-aminobutyrate aminotransferase (2.6.1.19 from EC) is a class III pyridoxal-phosphate-dependent aminotransferase. The enzyme catalyses the conversion of 4-aminobutanoate and 2-oxoglutarate into succinate semialdehyde and L-glutamate. The degree of sequence difference between this set and known bacterial examples is greater than the distance between, in either set, the most similar enzyme with a distinct function, and so the prokaryotic and eukaryotic sets have been placed into separate families. This family describes known bacterial examples of the enzyme. The best archaeal matches are presumed but not trusted to have the equivalent function. Escherichia coli has two isozymes. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.; GO: 0003867 4-aminobutyrate transaminase activity, 0009448 gamma-aminobutyric acid metabolic process.

Probab=100.00 E-value=0 Score=681.92 Aligned_cols=388 Identities=29% Similarity=0.467 Sum_probs=348.4 Q ss_pred CCCCEEEEEEEEEEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHCCCC Q ss_conf 77864688621328996898764641023775367878999999999999852201024568978999999999720378 Q gi|254780488|r 20 NPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAEQLARLLIKIAPLG 99 (423) Q Consensus 20 ~~~p~~i~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~ 99 (423) T Consensus 13 v~~~~fa~~aega~l~DvdGnr~IDfa~gIavln~GhshP~vV~AV~~Q~~ef~Ht~f~v~pYe~Yv~lAEkln~iaPgS 92 (427) T TIGR00700 13 VTLRVFAAKAEGAILKDVDGNRYIDFAAGIAVLNVGHSHPKVVEAVKRQVEEFTHTAFQVVPYESYVELAEKLNAIAPGS 92 (427) T ss_pred CCCCEEEEECCCCEEEECCCCEEEHHCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCCCCC T ss_conf 14512257558847874377521000110232036898735899999999974388534521625899999971578897 Q ss_pred -CCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCEECCCCC Q ss_conf -64111026542025677776430013344332113432025665321123432233-3333222344542100012222 Q gi|254780488|r 100 -LQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDTIGSMSVSMRG-AFNNSYEPLLFDVETIPFPHHN 177 (423) Q Consensus 100 -~~~v~f~~SGsEA~e~Alklar~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~s~~~-~~~~~~~p~~~~~~~i~~~~~~ 177 (423) T Consensus 93 g~kk~~ffnsGAEAVENAVKIAR~y-----TgrpgVvaF~~gfHGRTnmTMalT~Kv~PYK~GFGPFapevY~aP~py~y 167 (427) T TIGR00700 93 GEKKAVFFNSGAEAVENAVKIARKY-----TGRPGVVAFDRGFHGRTNMTMALTAKVKPYKIGFGPFAPEVYRAPYPYDY 167 (427) T ss_pred CCHHEEEECCCHHHHHHHHHHHHHH-----CCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCC T ss_conf 3100021115437888899999874-----58961686368746612678876522787345788867452116887200 Q ss_pred CC-----CCCCCH-----H------HHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCCCC Q ss_conf 22-----211110-----1------2212775113431165543211222233321100110111234200012212444 Q gi|254780488|r 178 EE-----QKTLDD-----L------EKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGW 241 (423) Q Consensus 178 ~~-----~~~l~~-----l------~~~~~~~~iaavi~EP~i~~~gG~~~~~~~~l~~lr~lc~~~g~llI~DEV~tG~ 241 (423) T Consensus 168 ~~~~~~~q~s~d~m~~~A~~~~f~~dkqv~a~~vAa~v~EP-vQGEGGFivp~k~fv~a~~~~C~ehgiVfiADEvQtGF 246 (427) T TIGR00700 168 RDIALDKQESLDDMVLAAIEALFVADKQVEAENVAAVVIEP-VQGEGGFIVPAKEFVAAVLDLCKEHGIVFIADEVQTGF 246 (427) T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC-CCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCC T ss_conf 24334422220038999999831210332501043789732-24788733385889999999754387589972545680 Q ss_pred CCCCCCCCCCCCCC---CCCEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHC Q ss_conf 45554311223344---442020134433222344433224013210001222222223333322221001100000000 Q gi|254780488|r 242 GRTGKIFACNHADI---TPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIW 318 (423) Q Consensus 242 GRtG~~~a~~~~gi---~PDi~~~gK~l~gG~~pisav~~~~~i~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i 318 (423) T Consensus 247 ARTG~~FA~eH~~~dGl~PDLit~aKslA~G-lPLSgV~GrAeimdAp------apGgLGGTyaGnPlacAAAlAvl~iI 319 (427) T TIGR00700 247 ARTGKLFAIEHYDDDGLKPDLITVAKSLADG-LPLSGVVGRAEIMDAP------APGGLGGTYAGNPLACAAALAVLDII 319 (427) T ss_pred CHHCCCEEEEECCCCCCCCCHHHHHHHHHCC-CCCCHHHCCHHHCCCC------CCCCCCCCCCCCHHHHHHHHHHHHHH T ss_conf 0002112541006788875188786677356-8621110441211688------88888775568879999999999863 Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHC-CCEEEECCCCCEEEEEEC-CCCC-CCCCHHHHHHHHHHHHCCEEEEEC---CC Q ss_conf 01123322210026789899997518-977777455339999970-6876-664106899999999788599951---99 Q gi|254780488|r 319 EKEPVIERIKNLERMHADRLSLLKSN-KKFVNIRQMGTIVALDFN-VQNK-GYFFDKNAKLKNFFREKKILIRPL---GH 392 (423) Q Consensus 319 ~~~~l~~~~~~~g~~l~~~l~~L~~~-~~v~~vrG~Gl~~~iel~-~~~~-~~~~~~~~~l~~~l~~~Gil~~~~---gn 392 (423) T Consensus 320 e~egL~ERa~qig~~~~d~l~~~k~~~p~IgdvRglGaMiAvE~vkdp~T~EPda~~a~~ia~~A~a~GlllLTcG~~GN 399 (427) T TIGR00700 320 EEEGLIERAEQIGKLVKDKLIELKEEVPAIGDVRGLGAMIAVELVKDPDTTEPDAALAEKIAAAALAAGLLLLTCGIYGN 399 (427) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCHHCC T ss_conf 11312478999878898888888760672111202633578886548878883179999999999756822123030115 Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHH Q ss_conf 8995689878799999999999999987 Q gi|254780488|r 393 IMYLMPPYCITATDLDHIYNTINEAVDF 420 (423) Q Consensus 393 ~i~l~Ppl~it~~eId~~l~~l~~aL~~ 420 (423) T Consensus 400 iIRfL~PLtI~D~ll~egl~Il~a~L~d 427 (427) T TIGR00700 400 IIRFLTPLTISDELLDEGLDILEAALAD 427 (427) T ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHHCC T ss_conf 5543488654678898899999998529

HHsearch alignment for GI: 254780488 and conserved domain: TIGR00700