HHsearch alignment for GI: 254780488 and conserved domain: TIGR01885
>TIGR01885 Orn_aminotrans ornithine--oxo-acid transaminase; InterPro: IPR010164 Ornithine aminotransferase catalyses the conversion of L-ornithine and a 2-oxo acid to L-glutamate 5-semialdehyde and an L-amino acid. This enzyme is found in low-GC bacteria, where it is responsible for the fourth step in arginine biosynthesis, and in the mitochondrial matrix of eukaryotes, where it controls L-ornithine levels in tissues. In human hereditary ornithine aminotransferase deficiency, the elevated levels of intraocular concentrations of ornithine are responsible for gyrate atrophy, which affects the CNS and peripheral nervous system ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding.
Probab=100.00 E-value=0 Score=786.65 Aligned_cols=396 Identities=29% Similarity=0.533 Sum_probs=359.4
Q ss_pred HHHCCCCCCCCEEEEEEEEEEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHH
Q ss_conf 12276787786468862132899689876464102377536787899999999999985220102456897899999999
Q gi|254780488|r 13 PFVQHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAEQLARLL 92 (423)
Q Consensus 13 ~~~~~~~~~~p~~i~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~q~~~~~~~~~~~~~~~~~~~la~~l 92 (423)
T Consensus 15 ~YgAhnYhPLPV~~~~g~G~~v~D~eG~~Y~D~LSaYSavNqGHchP~i~~Al~~Q~~KlT-L~Sraf~nd~lg~~~~~~ 93 (426)
T TIGR01885 15 KYGAHNYHPLPVVLQRGKGAYVWDPEGREYLDFLSAYSAVNQGHCHPKIVNALKNQADKLT-LTSRAFHNDVLGEFAKYL 93 (426)
T ss_pred CCCCCCCCCHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCC-CHHHHHHCCHHHHHHHHH
T ss_conf 3467788824788750683089814888864100255440137677168999999985137-102766060357899999
Q ss_pred HHHCCCCCCCEEECCCCCCHHHHHHHHHHHC-CCCCCCCC--CEEEEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCC--
Q ss_conf 9720378641110265420256777764300-13344332--113432025665321123432233-33332223445--
Q gi|254780488|r 93 IKIAPLGLQYVFFSDSGSTSIEVALKMALGF-FNNNNMPR--NKIVVMEHGYHGDTIGSMSVSMRG-AFNNSYEPLLF-- 166 (423)
Q Consensus 93 ~~~~p~~~~~v~f~~SGsEA~e~Alklar~~-~~~~~~~r--~~ii~~~~~yHG~t~~a~s~s~~~-~~~~~~~p~~~-- 166 (423)
T Consensus 94 t~LfgGk~~~vL~mNTGaEAvEtA~KLAR~WgY~~K~ip~~kA~ii~~~GNFhGRTlgA~S~Std~e~~k~~FGPflPnv 173 (426)
T TIGR01885 94 TKLFGGKYEKVLPMNTGAEAVETALKLARKWGYEVKGIPRNKAKIIAASGNFHGRTLGAVSASTDSETSKKGFGPFLPNV 173 (426)
T ss_pred HHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCC
T ss_conf 97549951056045687347999999999744135785576238998538873303544320267212006787967743
Q ss_pred ----CCCCEECCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCCCCC
Q ss_conf ----4210001222222211110122127751134311655432112222333211001101112342000122124444
Q gi|254780488|r 167 ----DVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWG 242 (423)
Q Consensus 167 ----~~~~i~~~~~~~~~~~l~~l~~~~~~~~iaavi~EP~i~~~gG~~~~~~~~l~~lr~lc~~~g~llI~DEV~tG~G 242 (423)
T Consensus 174 asGhgf~~iPYgd~EAl~~aL~~P~~~--GDnVAA~i~EP-IQGEAGvvvPp~gYl~~V~~LC~~~nVLfI~DEiQTGlG 250 (426)
T TIGR01885 174 ASGHGFRKIPYGDLEALRKALQDPKKT--GDNVAAFILEP-IQGEAGVVVPPPGYLPGVRALCKEHNVLFIADEIQTGLG 250 (426)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCC--CCCEEEEEECC-CCCCCCEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCC
T ss_conf 357852115588878999997275778--88689999504-035443684896357899998655187289820003840
Q ss_pred CCCCCCCCCCCC--CCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCC
Q ss_conf 555431122334--444202013443322234443322401321000122222222333332222100110000000001
Q gi|254780488|r 243 RTGKIFACNHAD--ITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEK 320 (423)
Q Consensus 243 RtG~~~a~~~~g--i~PDi~~~gK~l~gG~~pisav~~~~~i~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~ 320 (423)
T Consensus 251 RTGk~la~dh~~aev~PDi~lLGKALsGGv~PiSa~la~~dim~vl~P----GPF~HGSTfGGNPLAcavaiAaLeVL~~ 326 (426)
T TIGR01885 251 RTGKLLACDHENAEVKPDIVLLGKALSGGVYPISAVLADDDIMSVLKP----GPFEHGSTFGGNPLACAVAIAALEVLEE 326 (426)
T ss_pred HHHHHHHHHCCCCEECCCCEEEEHHHCCCCCCEEEEEECCCEEECCCC----CCCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 254533101058820450335112345894622436664640121176----4865677688757899999999998740
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCC--EEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEC-C-CEEEE
Q ss_conf 12332221002678989999751897--77774553399999706876664106899999999788599951-9-98995
Q gi|254780488|r 321 EPVIERIKNLERMHADRLSLLKSNKK--FVNIRQMGTIVALDFNVQNKGYFFDKNAKLKNFFREKKILIRPL-G-HIMYL 396 (423)
Q Consensus 321 ~~l~~~~~~~g~~l~~~l~~L~~~~~--v~~vrG~Gl~~~iel~~~~~~~~~~~~~~l~~~l~~~Gil~~~~-g-n~i~l 396 (423)
T Consensus 327 ekL~~~A~~lG~~f~~~L~~l~~~S~dvv~EVRGkGLL~AIe~~~~ka~--~~~~w~~Cl~~k~~GLlak~~nhd~~IR~ 404 (426)
T TIGR01885 327 EKLAERADQLGDMFLDELKQLARESPDVVKEVRGKGLLIAIEFKENKAD--EIGAWDVCLRLKENGLLAKPTNHDKIIRL 404 (426)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCEEEEEEECCCCC--CCCHHHHHHHHHCCCCEECCCCCCCEEEE
T ss_conf 4506889883289999999887507640001156721688885065333--26466887885207421013358706871
Q ss_pred CCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 6898787999999999999999
Q gi|254780488|r 397 MPPYCITATDLDHIYNTINEAV 418 (423)
Q Consensus 397 ~Ppl~it~~eId~~l~~l~~aL 418 (423)
T Consensus 405 aPPL~i~~E~L~~~ie~i~K~~ 426 (426)
T TIGR01885 405 APPLVITKEQLDEVIEIIRKTL 426 (426)
T ss_pred CCCCCCCHHHHHHHHHHHHHCC
T ss_conf 7885263899999999986049