>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

Probab=99.31 E-value=2.1e-10 Score=90.46 Aligned_cols=340 Identities=14% Similarity=0.117 Sum_probs=165.3 Q ss_pred CCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHCCH-HCCCCC-CHHHHHHHHHHHHHC---CCCCCCEEECCCCCCHH Q ss_conf 8764641023775367878999999999999852201-024568-978999999999720---37864111026542025 Q gi|254780488|r 39 HDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQI-IFSEYT-HEPAEQLARLLIKIA---PLGLQYVFFSDSGSTSI 113 (423) Q Consensus 39 G~~~lD~~~g~~~~~lGh~~~~i~~a~~~q~~~~~~~-~~~~~~-~~~~~~la~~l~~~~---p~~~~~v~f~~SGsEA~ 113 (423) T Consensus 32 ~~dvI~L~iGePdf---~~P~~i~~a~~~ai~~~~~~~~~~gY~~~~G~~~LReaia~~~~~~~~~~d~I~vt~Ga~~~l 108 (402) T TIGR03542 32 SASVIRLGIGDTTQ---PLPASVIEAFHEAVDELASEETYRGYGPEQGLPALREAIAENDYRGRISPEEIFISDGAKCDI 108 (402) T ss_pred CCCEEECCCCCCCC---CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHEEECCCCHHHH T ss_conf 99855898999899---989999999999997122467867779740649999999999756899889967777829999 Q ss_pred HHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHCCCC Q ss_conf 67777643001334433211343202566532112343223333332223445421000122222221111012212775 Q gi|254780488|r 114 EVALKMALGFFNNNNMPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQ 193 (423) Q Consensus 114 e~Alklar~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~ 193 (423) T Consensus 109 ~~-l-~a--~l----~pGD~Vii~~P~y~~Y~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~--e-~~~~~~~~~---~~ 172 (402) T TIGR03542 109 GR-L-QS--IF----GSDNTVAVQDPVYPAYVDTAVMTGRAGFADDT--GQYRGIVYLPCTK--E-NGFIPELPE---ER 172 (402) T ss_pred HH-H-HH--HH----CCCCEEEEECCCCCCHHHHHHHCCCCCCCCCC--CCCCCEEECCCCH--H-HCCCCCCCC---CC T ss_conf 99-9-99--83----99998998388881579999985995301356--6556725676762--4-385722234---55 Q ss_pred CEEEEEC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCC-------EEECCCC Q ss_conf 1134311-6554321122223332110011011123420001221244445554311223344442-------0201344 Q gi|254780488|r 194 KIAAFLV-EPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPD-------ILCLSKG 265 (423) Q Consensus 194 ~iaavi~-EP~i~~~gG~~~~~~~~l~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~gi~PD-------i~~~gK~ 265 (423) T Consensus 173 ktk~iiln~P--~NPTG~-v~s~eel~~i~~la~~~~i~iIsDEiY~~~~~~~~~~~s--~~~~~~~~~~~I~i~S~SK~ 247 (402) T TIGR03542 173 KIDIIYLCSP--NNPTGT-VLTKEQLKELVDYANAHGSLILFDAAYSAFISDPSIPHS--IYEIEGAKECAIEINSFSKS 247 (402) T ss_pred CCEEEEECCC--CCCCCC-CCCHHHHHHHHHHHHHCCEEEEECCCHHHHHCCCCCCCC--CEECCCCCCEEEECCCCCCC T ss_conf 7359998999--798875-689999999999987507079602228876168987620--11136652136731676240 Q ss_pred CCCCCCCCCCCCCCHHHHHHHCC--CCCCCCCCCCCCCCCCCC-CHHHHHCCHHHCCCCCC------CCCCCCHHHHHHH Q ss_conf 33222344433224013210001--222222223333322221-00110000000001123------3222100267898 Q gi|254780488|r 266 ITGGALPLAATLCSEEIFDSHLS--SDKKKTFFHSSSYTANPI-ACAAALANLQIWEKEPV------IERIKNLERMHAD 336 (423) Q Consensus 266 l~gG~~pisav~~~~~i~~~~~~--~~~~~~~~h~~T~~gnpl-~~aaa~a~L~~i~~~~l------~~~~~~~g~~l~~ 336 (423) T Consensus 248 ~~m~G~RiG~~i~p~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~q~a~~aal~---~~~~~~~~~~~~~~~~~~~~l~~ 323 (402) T TIGR03542 248 LGFTGVRLGWTVVPKELTYADGHSVIQDWE-RRLCTTFNGASYPVQRAAEAAYA---GEGLQPILEAISYYMENARILRE 323 (402) T ss_pred CCCCCCCHHHEECCHHHHHHHHHHHHHHHH-HHHHHCCCCCCHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHH T ss_conf 278340540211258775422799999999-99876257755999999999973---78859999999999999999999 Q ss_pred HHHHHHHCCCEEEECCCCCEEE-EEECCCCCCCCCHHHHHHHH-HHHHCCEEEEEC---C----CEEEECCCCCCCHHHH Q ss_conf 9999751897777745533999-99706876664106899999-999788599951---9----9899568987879999 Q gi|254780488|r 337 RLSLLKSNKKFVNIRQMGTIVA-LDFNVQNKGYFFDKNAKLKN-FFREKKILIRPL---G----HIMYLMPPYCITATDL 407 (423) Q Consensus 337 ~l~~L~~~~~v~~vrG~Gl~~~-iel~~~~~~~~~~~~~~l~~-~l~~~Gil~~~~---g----n~i~l~Ppl~it~~eI 407 (423) T Consensus 324 ~l~---~-~g~~~~~~~ga~yl~~~~--~~---~-~~~~~~~~~ll~e~~V~vvPG~~FG~~g~g~vRls--~a~~~e~l 391 (402) T TIGR03542 324 ALE---A-AGFKVYGGENAPYLWVKT--PE---G-ISSWDFFDFLLYQYHIVGTPGSGFGSSGEGFVRFS--AFGKRENI 391 (402) T ss_pred HHH---H-CCCEEECCCCCEEEEEEC--CC---C-CCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEE--EECCHHHH T ss_conf 887---5-695760799734897878--99---9-89899999999859999976447689998969999--72999999 Q ss_pred HHHHHHHHHHH Q ss_conf 99999999999 Q gi|254780488|r 408 DHIYNTINEAV 418 (423) Q Consensus 408 d~~l~~l~~aL 418 (423) T Consensus 392 ~ea~~Rl~~~L 402 (402) T TIGR03542 392 VAACERIKHAL 402 (402) T ss_pred HHHHHHHHHHC T ss_conf 99999999759

HHsearch alignment for GI: 254780488 and conserved domain: TIGR03542