HHsearch alignment for GI: 254780488 and conserved domain: pfam01276
>pfam01276 OKR_DC_1 Orn/Lys/Arg decarboxylase, major domain.
Probab=97.46 E-value=0.00076 Score=46.14 Aligned_cols=232 Identities=14% Similarity=0.150 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHCCCCCCCEEECCCCCC-HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC-CCCCCCCCC
Q ss_conf 999999999720378641110265420-256777764300133443321134320256653211234322-333333222
Q gi|254780488|r 85 AEQLARLLIKIAPLGLQYVFFSDSGST-SIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDTIGSMSVSM-RGAFNNSYE 162 (423)
Q Consensus 85 ~~~la~~l~~~~p~~~~~v~f~~SGsE-A~e~Alklar~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~s~-~~~~~~~~~ 162 (423)
T Consensus 67 ~I~eAq~~aA~~f-ga~~t~flvnGsT~g~~a~i~a~~-------~~Gd~Vl-v~RN~HkSv~~al~l~g~~Pvyl---~ 134 (417)
T pfam01276 67 PIKEAQKYAARVF-GADKSYFVVNGTSGANKTVGMAVC-------TPGDTVL-IDRNCHKSIHHALMMSGATPVYL---E 134 (417)
T ss_pred HHHHHHHHHHHHH-CCCCEEEEECCCCHHHHHHHHHHC-------CCCCEEE-EECCCHHHHHHHHHHCCCEEEEE---C
T ss_conf 9999999999983-999369984683099999999743-------8999899-71641899999999869858995---3
Q ss_pred CCCCCCCCEECCCC--CCCCCCCCH-HHHHCCCCCE-EEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCC
Q ss_conf 34454210001222--222211110-1221277511-3431165543211222233321100110111234200012212
Q gi|254780488|r 163 PLLFDVETIPFPHH--NEEQKTLDD-LEKHCSTQKI-AAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVM 238 (423)
Q Consensus 163 p~~~~~~~i~~~~~--~~~~~~l~~-l~~~~~~~~i-aavi~EP~i~~~gG~~~~~~~~l~~lr~lc~~~g~llI~DEV~ 238 (423)
T Consensus 135 p~-~~~~gi~~~i~~~~~~~e~~~~~l~~~p~~k~~~~v~lt~Pt--Y~G-~-~~--d-i~~i~~~~h~~~~~llvDEAh 206 (417)
T pfam01276 135 PT-RNAYGIIGGIPLHEFQEETIKEALAEVPPAKGPRLAVITNGT--YDG-T-IY--N-AKEIVDTLGHLSDYILFDSAW 206 (417)
T ss_pred CC-CCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCEEEEEECCC--CCE-E-EE--C-HHHHHHHHHHCCCEEEEECCC
T ss_conf 64-243466158882545999999999858765685089998999--870-6-52--8-999999986339879997887
Q ss_pred CCCCCCCCCCCCCCCCCCCC-------EEE--CCCCCCCCCCCCCCCC-CCHH-HHH--HHCCCCCCCCCCCCCCCCCCC
Q ss_conf 44445554311223344442-------020--1344332223444332-2401-321--000122222222333332222
Q gi|254780488|r 239 TGWGRTGKIFACNHADITPD-------ILC--LSKGITGGALPLAATL-CSEE-IFD--SHLSSDKKKTFFHSSSYTANP 305 (423)
Q Consensus 239 tG~GRtG~~~a~~~~gi~PD-------i~~--~gK~l~gG~~pisav~-~~~~-i~~--~~~~~~~~~~~~h~~T~~gnp 305 (423)
T Consensus 207 Gah~~F~pl-p~~a~~~gad~~~~~~~~vvqS~HKtL~-a-ltQ~s~Lh~~~~~~~~~~~~~----~~l~~~qTTSPsY~ 279 (417)
T pfam01276 207 VGYEQFIPI-YADASPMGGDNVNDPGIIVTQSVHKLLA-A-FSQASQIHKKDSHIVNHKRFN----EAFMMHTSTSPFYP 279 (417)
T ss_pred CCCCCCCCC-CHHHHHCCCCCCCCCCEEEEEEHHHCCC-C-CCHHHHHHHCCCCCCCHHHHH----HHHHHHCCCCHHHH
T ss_conf 520246878-3346656788666772279861111354-3-043432121678778999999----99997738874899
Q ss_pred C--CHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 1--0011000000000112332221002678989999751
Q gi|254780488|r 306 I--ACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKS 343 (423)
Q Consensus 306 l--~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~L~~ 343 (423)
T Consensus 280 lmASLD~ar~~m~~~~G~~l~~~~i~~a~~~R~~i~~l~~ 319 (417)
T pfam01276 280 IVASLDVAAAMMEGNSGRRLWQESLERAIEFRKEIKTLND 319 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999999999975355499999999999999999986457