RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddB 21,608 sequences; 5,994,473 total letters Searching..................................................done Query= gi|254780488|ref|YP_003064901.1| adenosylmethionine--8-amino-7-oxononanoate transaminase [Candidatus Liberibacter asiaticus str. psy62] (423 letters) >gnl|CDD|180329 PRK05964, PRK05964, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional. Length = 423 Score = 681 bits (1760), Expect = 0.0 Identities = 203/424 (47%), Positives = 270/424 (63%), Gaps = 6/424 (1%) Query: 1 MNHLHSNYPIWHPFVQHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPI 60 +WHP+ Q +P I++ EG+YL + ++IDAISSWWV THGH HP Sbjct: 3 QLMALDLSHVWHPYTQMKLHPPPIPIVRAEGAYLYLADGRELIDAISSWWVATHGHNHPY 62 Query: 61 IMNAIRSASENYDQIIFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMA 120 I AIR + D +IF+ +THEPAE+LA+ L+ + P GL +VFFSDSGS ++EVALKMA Sbjct: 63 IDQAIREQLDRLDHVIFAGFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEVALKMA 122 Query: 121 LGFFNNNNM-PRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEE 179 L ++ N R++ + + GYHGDTIG+MSV RG + Y PLLF+ T PFP E Sbjct: 123 LQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYE 182 Query: 180 QKTLDDLEKHCS--TQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEV 237 Q TLD LE +IAAF+VEPL+ GAGGM Y P L E RI ++ LLI DE+ Sbjct: 183 QATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEI 242 Query: 238 MTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFH 297 TG+GRTG +FAC A ++PDI+CLSKG+TGG LPLAATLC+ EIF++ S D+ K F H Sbjct: 243 ATGFGRTGTLFACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMH 302 Query: 298 SSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFVNIRQMGTIV 357 S SYTANP+ACAAA A+L ++E EPV+ER+ L A+ L + ++R +G I Sbjct: 303 SPSYTANPLACAAANASLDLFEDEPVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIG 362 Query: 358 ALDFNVQNKGYFFDKNAKLKNFFREKKILIRPLGHIMYLMPPYCITATDLDHIYNTINEA 417 A++ + L+ F E+ +L+RPLG+ +YLMPPY ITA +LD I + I E Sbjct: 363 AVELDRPVL---ERDGPALRAFALERGVLLRPLGNTIYLMPPYIITAEELDRITDAIVEV 419 Query: 418 VDFL 421 D L Sbjct: 420 ADEL 423 >gnl|CDD|180800 PRK07030, PRK07030, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional. Length = 466 Score = 343 bits (882), Expect = 4e-95 Identities = 167/435 (38%), Positives = 244/435 (56%), Gaps = 29/435 (6%) Query: 10 IWHPFVQ---HFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIR 66 +WHP Q H P I + EG +L D + +DA+SSWWV GH +P I I+ Sbjct: 15 LWHPCTQMKDHEQLPLIP-IRRGEGVWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIK 73 Query: 67 SASENYDQIIFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNN 126 + + +I + ++HEP +L+ L+KI P GL F++D+GS++IEVALKM+ ++ N Sbjct: 74 DQVDQLEHVILAGFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIEVALKMSFHYWRN 133 Query: 127 NNMPRNK-IVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFP--HHNEEQKTL 183 PR K V + + YHG+T+ +MSV F +Y+PLL D +P P + E + Sbjct: 134 RGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSW 193 Query: 184 DD------------LEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTL 231 ++ L +H +IAA +VEPLI GAGGM+ Y P LK +Y Sbjct: 194 EEHSRRMFAHMEQTLAEH--HDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVH 251 Query: 232 LIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSS-D 290 LI DE+ G+GRTG +FAC A I PD LCLSK +TGG LPLAA L ++ ++ + Sbjct: 252 LIHDEIAVGFGRTGTMFACEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDYP 311 Query: 291 KKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFVNI 350 + F HS SYT NP+ACAAALA L I+E++ VIE + L R A+ + L + + Sbjct: 312 TLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIENNRALARRMAEATAHLADHPHVAEV 371 Query: 351 RQMGTIVALDFNVQNKG----YFFDKNAKLKNFFR--EKKILIRPLGHIMYLMPPYCITA 404 RQ G I+A++ VQ+K Y + + LK + E+ L+RPLG ++Y +PPY IT Sbjct: 372 RQTGMILAIEM-VQDKASKTPYPWQERRGLKVYQHALERGALLRPLGSVVYFLPPYVITP 430 Query: 405 TDLDHIYNTINEAVD 419 +D + +E +D Sbjct: 431 EQIDFLAEVASEGID 445 >gnl|CDD|180746 PRK06916, PRK06916, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional. Length = 460 Score = 329 bits (845), Expect = 9e-91 Identities = 166/442 (37%), Positives = 255/442 (57%), Gaps = 45/442 (10%) Query: 10 IWHPFVQ----HFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAI 65 +WHPF Q +P I + EG L D N ++ D +SS W+ HGH+ P + AI Sbjct: 24 VWHPFTQMKDYLEEDPLI--IERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAI 81 Query: 66 RSASENYDQIIFSEY---THEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALG 122 R E ++I S + P+ LA LI++ P GL+ VF+SDSG+T++E+A+KMA Sbjct: 82 R---EQLNKIAHSTLLGLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQ 138 Query: 123 FFNNNNMP-RNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPH------ 175 ++ N P + + V +++ YHGDTIG++SV F+ Y LLF+ +P+P+ Sbjct: 139 YWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPY 198 Query: 176 -HNEE---QKTLDDLEKHCST--QKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYD 229 +++ +K L++LE+ ++IAA +VEPL+ GAGGM T LK + KY+ Sbjct: 199 GNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYN 258 Query: 230 TLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSS 289 L I DEV TG+GRTGK+FAC H ++TPDI+ KG+TGG LP+A T+ ++EI+++ Sbjct: 259 VLFITDEVATGFGRTGKMFACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGD 318 Query: 290 -DKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFV 348 +++KTFFH SYT NP+ CA ALANL+++EK +IE++ A +L L + K Sbjct: 319 YEEQKTFFHGHSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLFALKHVG 378 Query: 349 NIRQMGTIVALDFNVQNK------------GYFFDKNAKLKNFFREKKILIRPLGHIMYL 396 +IRQ+G +V ++ V+NK G K + RE +L RPLG+ + Sbjct: 379 DIRQLGLMVGIEL-VKNKETKEPFEWTERVGVQVCKRS------RELGMLTRPLGNTIVF 431 Query: 397 MPPYCITATDLDHIYNTINEAV 418 MPP T +LD + + +A+ Sbjct: 432 MPPLASTIDELDEMLRILYKAI 453 >gnl|CDD|181189 PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated. Length = 428 Score = 314 bits (806), Expect = 3e-86 Identities = 151/425 (35%), Positives = 228/425 (53%), Gaps = 30/425 (7%) Query: 10 IWHPFVQHF----CNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAI 65 IWHP+ P ++ EG LI + +++D +SSWW HG+ HP + A+ Sbjct: 13 IWHPYTSMTSPLPVYP----VVSAEGCELILADGRRLVDGMSSWWAAIHGYNHPQLNAAM 68 Query: 66 RSASENYDQIIFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFN 125 +S + ++F TH PA +L R L+ + P L+ VF +DSGS ++EVA+KMAL ++ Sbjct: 69 KSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQ 128 Query: 126 NNNMPRNKIVVMEHGYHGDTIGSMSV-----SMRGAFNNSYEPLLF-DVETIPFPHHNEE 179 PR + + + HGYHGDT G+MSV SM + LF F +E Sbjct: 129 AKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDE 188 Query: 180 QKTLD---DLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADE 236 + + H +IAA ++EP++ GAGGM+ Y P LK ++ + LLIADE Sbjct: 189 RDIAPFARLMAAH--RHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADE 246 Query: 237 VMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFF 296 + TG+GRTGK+FAC HA I PDILCL K +TGG + L+ATL + E+ ++ +S+ + F Sbjct: 247 IATGFGRTGKLFACEHAGIAPDILCLGKALTGGTMTLSATLTTREVAET-ISNGEAGCFM 305 Query: 297 HSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFVNIRQMGTI 356 H ++ NP+ACA A A+L + E +++ +E + L+ L+ ++R +G I Sbjct: 306 HGPTFMGNPLACAVANASLSLLESGDWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAI 365 Query: 357 --VALDFNVQNKGYFFDKNAKLKNFFREKKILIRPLGHIMYLMPPYCITATDLDHIYNTI 414 V V A L+ FF E+ + IRP G ++YLMPPY I L + + Sbjct: 366 GVVETTRPVN--------MAALQRFFVEQGVWIRPFGKLIYLMPPYIILPEQLQRLTAAV 417 Query: 415 NEAVD 419 N AV Sbjct: 418 NRAVQ 422 >gnl|CDD|161905 TIGR00508, bioA, adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae. Length = 427 Score = 313 bits (804), Expect = 5e-86 Identities = 150/421 (35%), Positives = 229/421 (54%), Gaps = 23/421 (5%) Query: 10 IWHPFVQHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSAS 69 IWHP+ + +G L ++ ++ID +SSWW HG+ HP + A + Sbjct: 15 IWHPYTSMSSPLPVYPVESADGVELTLDDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQI 74 Query: 70 ENYDQIIFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNM 129 + ++F +TH+PA +L + L+K+ P L VF +DSGS ++EVALKMAL ++ Sbjct: 75 DKMSHVMFGGFTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQAKGE 134 Query: 130 P-RNKIVVMEHGYHGDTIGSMSV-----SMRGAFNNSYEPLLF-DVETIPFPHH-NEEQK 181 R K + + GYHGDT G+MSV SM + +F F NEE Sbjct: 135 KNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAI 194 Query: 182 T--LDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMT 239 T +E H + +IAA ++EP++ GAGGM+ Y P LK + K+YD LLIADE+ T Sbjct: 195 TPLAKLMELH--SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIAT 252 Query: 240 GWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSS 299 G+GRTGK+FAC HA + PDILC+ K +TGG + L+AT+ ++++ +SS + F H Sbjct: 253 GFGRTGKLFACEHAGVVPDILCVGKALTGGYMTLSATVTTDKV-AQTISSGEAGCFMHGP 311 Query: 300 SYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFVNIRQMGTI--V 357 ++ NP+ACA A A+L I + +++ +E LS L+ N ++R +G I V Sbjct: 312 TFMGNPLACAVAEASLAILLEGEWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVV 371 Query: 358 ALDFNVQNKGYFFDKNAKLKNFFREKKILIRPLGHIMYLMPPYCITATDLDHIYNTINEA 417 + V +L+ F E+ + IRP G ++Y+MPPY IT L + + EA Sbjct: 372 EMYKPVN--------VEELQKKFVEQGVWIRPFGKLIYVMPPYIITTEQLQKLTAALIEA 423 Query: 418 V 418 + Sbjct: 424 L 424 >gnl|CDD|181545 PRK08742, PRK08742, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional. Length = 472 Score = 309 bits (792), Expect = 9e-85 Identities = 158/441 (35%), Positives = 246/441 (55%), Gaps = 36/441 (8%) Query: 10 IWHPFVQHFCNP---TFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIR 66 +WHP Q +P I + EG++L+ + + +DA+SSWW GH P I AI Sbjct: 31 LWHPCTQMREHPHTLPLVPIARGEGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIA 90 Query: 67 SASENYDQIIFSEYTHEPAEQLARLLIKIAPLG-----LQYVFFSDSGSTSIEVALKMAL 121 + + +Q++ + +THEPA QLA L+ IAP L VF++D+GS +EVALKMA Sbjct: 91 AQAGELEQVMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAF 150 Query: 122 GFFNNNNMP-RNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFP------ 174 +F+N R + + +E+GYHG+TIG+++V + Y PLL + P P Sbjct: 151 HYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAE 210 Query: 175 -------HHNEEQKTLDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKK 227 + + L L + S +I A ++EP + AGGM+ + P L+ + Sbjct: 211 PGQSAEDYALQAADALQALFEQ-SPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDA 269 Query: 228 YDTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHL 287 + LIADE+ TG+GRTG +FAC A + PD+LCLSKG+TGG LPL+A L +++++D+ L Sbjct: 270 HGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFL 329 Query: 288 SSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKS---- 343 +++ F HS SYT NP+ACAAALA L I+ + VI R + A R++ L + Sbjct: 330 DDSRERAFLHSHSYTGNPLACAAALATLDIFADDDVIAR----NQPTAARMTQLAAQIGE 385 Query: 344 NKKFVNIRQMGTIVALDFNVQ-NKGYFFDKNAKLK-NFFR---EKKILIRPLGHIMYLMP 398 + ++RQ G +VA + NK F A++ + +R + +++RPLG ++Y MP Sbjct: 386 HPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPLGDVLYWMP 445 Query: 399 PYCITATDLDHIYNTINEAVD 419 PYC+ L + +T A+D Sbjct: 446 PYCVDEAQLALLADTTRHAID 466 >gnl|CDD|180767 PRK06943, PRK06943, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional. Length = 453 Score = 293 bits (753), Expect = 4e-80 Identities = 143/420 (34%), Positives = 225/420 (53%), Gaps = 28/420 (6%) Query: 10 IWHPFVQ--HFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRS 67 +WHP Q H + + EG++L D + + +DAISSWWV GH +P I A++ Sbjct: 22 VWHPCTQMKHHERLPLLPVARGEGAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKD 81 Query: 68 ASENYDQIIFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNN 127 + + + + THEPA +LA L + L + FF+ G++++E+ALKM+ + N Sbjct: 82 QLDTLEHAMLAGCTHEPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNR 141 Query: 128 NMP-RNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQ------ 180 + + V + +GYHG+TIG++ V+ F ++Y+PL+ + P + Sbjct: 142 GRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAA 201 Query: 181 ----KTLDDLEKHCS--TQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIA 234 + L D+ + + KIAA +VEPL+ A GM + P L+ + +Y LIA Sbjct: 202 DVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIA 261 Query: 235 DEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKT 294 DE+ G GRTG FAC A + PD LCLSKGI+GG LPL+ L + IF + D + Sbjct: 262 DEIAVGCGRTGTFFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRG 321 Query: 295 FFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMH--ADRLSLLKSNKKFVNIRQ 352 F HS SYT NP+AC AALA L ++ ++ V+ R N + L+ L ++ + ++RQ Sbjct: 322 FLHSHSYTGNPLACRAALATLDLFAEDDVLAR--NARKSARLRAALAPLAAHPQVRHLRQ 379 Query: 353 MGTIVALDFNV-QNKGYFFDKNAKLKNFF---REKKILIRPLGHIMYLMPPYCITATDLD 408 GTI A D + + F + FF E+++L+RP+G +YLMPPY + ++ Sbjct: 380 RGTIFAFDVALDGDAARTFS-----RRFFEAALERELLLRPIGTTVYLMPPYVLDDDEIA 434 >gnl|CDD|180174 PRK05630, PRK05630, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional. Length = 422 Score = 285 bits (731), Expect = 1e-77 Identities = 138/419 (32%), Positives = 223/419 (53%), Gaps = 22/419 (5%) Query: 10 IWHPFVQHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSAS 69 IWHP+ + T+G +L E+ +IDA+SSWW HGH HP + A Sbjct: 12 IWHPYAAPGVRNRL--VTSTDGVFLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQI 69 Query: 70 ENYDQIIFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNM 129 + ++F THEPA +L R L+ + GL +VF+SDSGS S+EVA+KMAL + Sbjct: 70 DTMSHVMFGGLTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEVAIKMALQYSKGQGH 129 Query: 130 P-RNKIVVMEHGYHGDTIGSMSV-SMRGAFNNSYEPLLFDVETIPFP-----HHNEEQKT 182 P R +++ GYHGDT +MSV G ++ ++ L + P P E + Sbjct: 130 PERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEY 189 Query: 183 LDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWG 242 L LE + +AA ++EP++ GAGGM+ + +++ + K+D LLIADE+ TG+G Sbjct: 190 LRSLELLID-ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFG 248 Query: 243 RTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYT 302 RTG++FA A +TPDI+C+ K +TGG + AATLC++++ + + H ++ Sbjct: 249 RTGELFATLAAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFM 308 Query: 303 ANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFVNIRQMGTIVALDFN 362 ANP+ACA A A+L+I E +++K +E LS L ++R +G I ++ Sbjct: 309 ANPLACAVAHASLEIIETGMWRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGVVE-- 366 Query: 363 VQNKGYFFDKNAKLKNFFR---EKKILIRPLGHIMYLMPPYCITATDLDHIYNTINEAV 418 ++ ++ + + + +RP G ++Y+MPPY T+ + I + AV Sbjct: 367 -------MEQPVDMEEATQAAVDHGVWLRPFGRLVYVMPPYITTSEQIAQICAALAAAV 418 >gnl|CDD|180441 PRK06173, PRK06173, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional. Length = 429 Score = 280 bits (717), Expect = 7e-76 Identities = 143/412 (34%), Positives = 223/412 (54%), Gaps = 27/412 (6%) Query: 10 IWHPFVQHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSAS 69 IWHP+ + + +G + ++ ++ID +SSWW HG+ HP + A + Sbjct: 14 IWHPYSSVTDPIPVYPVERADGVMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQL 73 Query: 70 ENYDQIIFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNM 129 I+F +THEPA +LA+ L++I P L +FF+DSGS ++EVA+KMAL + Sbjct: 74 AKMSHIMFGGFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVEVAMKMALQYQQAKGE 133 Query: 130 P-RNKIVVMEHGYHGDTIGSMSV-----SMRGAFNNSYEPLLFDVE-TIPF--PHHNEEQ 180 R K + GYHGDT +MSV M G FN+S F + +I F ++E Sbjct: 134 VQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAI 193 Query: 181 KTLDDL-EKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMT 239 + L DL E+ +IAA ++EP++ GAGGM Y P L + + +Y LLI DE+ T Sbjct: 194 EPLQDLLEQKGD--EIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIAT 251 Query: 240 GWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSS 299 G+GRTGK+FA HA + PDI+C+ K +TGG L L+AT+ +E I + + S + K F H Sbjct: 252 GFGRTGKLFALEHAGVVPDIMCIGKALTGGYLTLSATITTEAIAQT-ICSGEAKCFMHGP 310 Query: 300 SYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFVNIRQMGTIVAL 359 ++ ANP+ACA A ++++ + P + I+ +E L+ +R +G I + Sbjct: 311 TFMANPLACAIAAESIRLLLESPWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVV 370 Query: 360 DF----NVQNKGYFFDKNAKLKNFFREKKILIRPLGHIMYLMPPYCITATDL 407 + N+ A L+ F E I +RP G ++Y+MPP+ I+ +L Sbjct: 371 EMKEPVNM----------ATLQPRFVEHGIWVRPFGKLVYIMPPFIISPDEL 412 >gnl|CDD|168967 PRK07481, PRK07481, hypothetical protein; Provisional. Length = 449 Score = 233 bits (595), Expect = 9e-62 Identities = 144/444 (32%), Positives = 216/444 (48%), Gaps = 49/444 (11%) Query: 11 WHPFVQ----HFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIR 66 WHP P I++ +G Y+ D + K++D + W + GH + AI Sbjct: 11 WHPMAHPAEMKARPP--IIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIV 68 Query: 67 SASEN--YDQIIFSEYTHEPAEQLARLLIK-IAPLGLQYVFFSDSGSTSIEVALKMALGF 123 + Y F TH A +L+ LI AP G++ VFFS GS S+E ALK+A + Sbjct: 69 RQLDELEYYST-FDGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQY 127 Query: 124 FNNNNMP-RNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLL---FDVETI-----PFP 174 + P R K + ++ GYHG G SV+ F +YEPLL F VET PF Sbjct: 128 WKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFT 187 Query: 175 HHNEEQ------KTLDDLEKHCSTQKIAAFLVEPLILGAGGM----QTYRPYILKEFMRI 224 + E+ + L+ IAAF+ EP + GAGG+ + P +++E + Sbjct: 188 EQDPEELARICARLLEREIAFQGPDTIAAFIAEP-VQGAGGVIVPPANFWP-LVRE---V 242 Query: 225 TKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFD 284 ++ LLIADEV+TG+GRTG F + PDI+CL+KGIT G +PL AT+ + I D Sbjct: 243 CDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIAD 302 Query: 285 SHLSS-DKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHA---DRLSL 340 + ++ D H +Y+ +P+ACAAALA L I +E + N + A + L Sbjct: 303 AFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVREDLPA---NAAKRGAYLLEGLQP 359 Query: 341 LKSNKKFV-NIRQMGTIVALDFNVQNK------GYFFDKNAKLKNFFREKKILIRPLGHI 393 LK + V ++R G ++ALD V +K + + RE +L+RP G Sbjct: 360 LKERFELVGDVRGKGLMLALDL-VADKATREPIDPSKGYANAVADVARENGVLVRPSGTK 418 Query: 394 MYLMPPYCITATDLDHIYNTINEA 417 + L PP I D+D I + ++ Sbjct: 419 IILSPPLVIQREDVDRIVDALDAG 442 >gnl|CDD|181707 PRK09221, PRK09221, beta alanine--pyruvate transaminase; Provisional. Length = 445 Score = 232 bits (594), Expect = 1e-61 Identities = 140/448 (31%), Positives = 214/448 (47%), Gaps = 63/448 (14%) Query: 11 WHPFVQHFCNPTFKK----IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIR 66 W PF N FK ++ EG Y D + KI+D + W GH P I+ A+ Sbjct: 19 WMPFT---ANRQFKAAPRLLVSAEGMYYTDADGRKILDGTAGLWCCNAGHGRPEIVEAVA 75 Query: 67 SASENYDQIIFS---EYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGF 123 + D ++ + H A +LA L ++AP GL +VFF++SGS S++ ALK+AL + Sbjct: 76 RQAATLD---YAPAFQMGHPLAFELAERLAELAPGGLDHVFFTNSGSESVDTALKIALAY 132 Query: 124 FNNNNMP-RNKIVVMEHGYHGDTIGSMSVSMRGAFNN--SYEPLLFDVETIPFPHHNEEQ 180 R +++ E GYHG G +SV G NN + LL V+ +P E Sbjct: 133 HRARGQGTRTRLIGRERGYHGVGFGGISVG--GIVNNRKMFGGLLPGVDHLPHTLDLPEN 190 Query: 181 K-----------TLDDLEKHC-----STQKIAAFLVEPLILGAGGMQTYRPYILKEFMRI 224 DDLE+ ST IAA +VEP+ AG + + Y L+ I Sbjct: 191 AFSKGQPEHGAELADDLERLVALHDAST--IAAVIVEPMAGSAGVLVPPKGY-LQRLREI 247 Query: 225 TKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFD 284 K+ LLI DEV+TG+GR G FA +TPDI+ +KG+T GA+P+ A + S+EI+D Sbjct: 248 CDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDIITFAKGLTNGAIPMGAVIASDEIYD 307 Query: 285 SHLSS-DKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKS 343 + + + FFH +Y+A+P+ACAA LA L I+ +E + ER L D + LK Sbjct: 308 AFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREEDLFERAAELAPYFEDAVHSLKG 367 Query: 344 NKKFVNIRQMGTIVALD------------FNVQNKGYFFDKNAKLKNFFREKKILIRPLG 391 ++IR +G + ++ + K + EK +L+R G Sbjct: 368 LPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKCF-------------EKGLLVRYTG 414 Query: 392 HIMYLMPPYCITATDLDHIYNTINEAVD 419 + L PP I +D + + + +A+ Sbjct: 415 DTIALSPPLIIEKAQIDELVDALGDALR 442 >gnl|CDD|183999 PRK13360, PRK13360, omega amino acid--pyruvate transaminase; Provisional. Length = 442 Score = 228 bits (584), Expect = 1e-60 Identities = 138/437 (31%), Positives = 217/437 (49%), Gaps = 41/437 (9%) Query: 11 WHPFVQHFCNPTFKK----IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIR 66 W PF N FKK ++ +G Y + +++D + W + GH P I+ A+R Sbjct: 16 WMPFT---ANRQFKKAPRLLVAAKGMYYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEAVR 72 Query: 67 SASENYDQIIFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFN- 125 + + D + H A +LA + +IAP GL +VFF++SGS S++ ALK+AL + Sbjct: 73 AQAGELDYAPAFQMGHPKAFELANRIAEIAPGGLNHVFFTNSGSESVDTALKIALAYHRA 132 Query: 126 NNNMPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPF------------ 173 R +++ E GYHG G +SV ++ LL V+ +P Sbjct: 133 RGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKG 192 Query: 174 -PHHNEEQKTLDDLEK----HCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKY 228 P H E D+LE+ H IAA +VEP+ G + + Y L+ I K+ Sbjct: 193 QPEHGAELA--DELERLVTLH-DASTIAAVIVEPVAGSTGVLIPPKGY-LQRLREICDKH 248 Query: 229 DTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLS 288 LLI DEV+TG+GR G FA + +TPD+L +KG+T GA+P+ A S EI D+ + Sbjct: 249 GILLIFDEVITGFGRLGAPFAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQ 308 Query: 289 SDKKKT-FFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKF 347 + FFH +Y+ +P+ACAAALA L ++E+E ++ R L D L L+ Sbjct: 309 GPEAGIEFFHGYTYSGHPLACAAALATLDLYEREGLLTRAARLAPYWEDALHSLRDAPHV 368 Query: 348 VNIRQMGTIVALDFN-----VQNKGYFFDKNAKLKNFFREKKILIRPLGHIMYLMPPYCI 402 ++IR +G + A++ + Y LK F EK ++IR G I+ L PP I Sbjct: 369 IDIRNLGLVGAVELAPRDGKPGKRAY----EVFLKCF--EKGLMIRYTGDILALSPPLII 422 Query: 403 TATDLDHIYNTINEAVD 419 +D +++ + +A+ Sbjct: 423 EEAQIDELFDILAQALK 439 >gnl|CDD|179453 PRK02627, PRK02627, acetylornithine aminotransferase; Provisional. Length = 396 Score = 227 bits (581), Expect = 5e-60 Identities = 116/406 (28%), Positives = 203/406 (50%), Gaps = 49/406 (12%) Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASE------NYDQIIFSE 79 ++ EG+ L D++ + +D ++ V GH HP ++ AI+ + N Sbjct: 25 FVRGEGARLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNL------- 77 Query: 80 YTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEH 139 Y EP E+LA L++++ G+ VFF +SG+ + E A+K+A + + + + +I+ E+ Sbjct: 78 YYIEPQEELAEKLVELS--GMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAEN 135 Query: 140 GYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFL 199 +HG T+ ++S + + + +EPL+ +PF ++ L+ T K AA + Sbjct: 136 SFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPF-------NDIEALKAAI-TDKTAAVM 187 Query: 200 VEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDI 259 +EP I G GG+ L+ + + LLI DEV TG GRTGK+FA H I PDI Sbjct: 188 LEP-IQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPDI 246 Query: 260 LCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFF----HSSSYTANPIACAAALANL 315 + L+KG+ GG +P+ A L E++ D F H S++ NP+ACAAALA + Sbjct: 247 MTLAKGL-GGGVPIGAVLAKEKVADV----------FTPGDHGSTFGGNPLACAAALAVI 295 Query: 316 QIWEKEPVIERIKNLERMHADRLSLLKSNKKFVN-IRQMGTIVALDFNVQNKGYFFDKNA 374 +I E+E ++E + +L L + +R +G ++ ++ + K A Sbjct: 296 EIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIELDRPAAEIV--KKA 353 Query: 375 KLKNFFREKKILIRPLG-HIMYLMPPYCITATDLDHIYNTINEAVD 419 EK +LI G +++ L+PP I+ ++D + + E + Sbjct: 354 ------LEKGLLINVTGDNVLRLLPPLIISKEEIDEAVDRLEEVLK 393 >gnl|CDD|181234 PRK08117, PRK08117, 4-aminobutyrate aminotransferase; Provisional. Length = 433 Score = 212 bits (541), Expect = 2e-55 Identities = 124/413 (30%), Positives = 212/413 (51%), Gaps = 34/413 (8%) Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPA 85 ++K EG Y + + +D S V GHRHP ++ AI+ ++ +E Sbjct: 29 VVKGEGCYYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVIYYESI 88 Query: 86 EQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDT 145 +LA L +I P GL FFS+SG+ +IE ALK+A R I+ +HG T Sbjct: 89 LKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHV-----TKRPYIISFTGCFHGRT 143 Query: 146 IGSMSVSMRGA-FNNSYEPLLFDVETIPFP-------HHNEEQ------KTLDDLEKHCS 191 +G++SV+ + + Y+PLL V P+P + E + L+ L KH Sbjct: 144 LGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQV 203 Query: 192 T-QKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFAC 250 T +++AA ++EP +LG GG LK+ I ++ LLI DEV TG+GRTG+ FA Sbjct: 204 TPEEVAAVIIEP-VLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAA 262 Query: 251 NHADITPDILCLSKGITGGALPLAATLCSEEIFDS-HLSSDKKKTFFHSSSYTANPIACA 309 + PDI+ ++KGI G LPL+A + S+E+ + L S H +++ NP+ACA Sbjct: 263 QTFGVVPDIMTIAKGIASG-LPLSAVVASKELMEQWPLGS-------HGTTFGGNPVACA 314 Query: 310 AALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFV-NIRQMGTIVALDFNVQNKGY 368 AALA L++ ++E +++ + +RL +LK + ++R +G ++ ++ + Sbjct: 315 AALATLEVIKEEKLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGEP 374 Query: 369 FFDKNAKLKNFFREKKILIR---PLGHIMYLMPPYCITATDLDHIYNTINEAV 418 D K+ + EK +L G+++ ++PP +T ++D + ++EA+ Sbjct: 375 DGDAVEKILDKCLEKGLLFYLCGNAGNVLRMIPPLTVTKEEIDEGLDILDEAL 427 >gnl|CDD|180401 PRK06105, PRK06105, aminotransferase; Provisional. Length = 460 Score = 209 bits (535), Expect = 9e-55 Identities = 126/428 (29%), Positives = 203/428 (47%), Gaps = 47/428 (10%) Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQI----IFSEYT 81 I + EG Y+ D+ + I+ ++ W + G ++ A A+ ++ FS + Sbjct: 34 IERGEGIYVYDDAGKRYIEGMAGLWSVALGFSEQRLVEA---AARQMKKLPFYHTFSHKS 90 Query: 82 HEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMP-RNKIVVMEHG 140 H P LA L+ +AP+ + VFF++SGS + + +K+ + N P + KI+ + G Sbjct: 91 HGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRG 150 Query: 141 YHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPF-----PHH--------NEEQ---KTLD 184 YHG TI S S+ G NN FD+ PH+ +EE + + Sbjct: 151 YHGVTIAS--ASLTGLPNNHRS---FDLPLDRILHTGCPHYYRFGLPGESEEAFATRLAN 205 Query: 185 DLEKHCSTQ---KIAAFLVEPLILGAGGM----QTYRPYILKEFMRITKKYDTLLIADEV 237 +LE + IAAF+ EP ++GAGG+ +TY I + +KYD LL+ADEV Sbjct: 206 ELEALILAEGPDTIAAFIGEP-VMGAGGVIVPPKTYWEKI----QAVLRKYDILLVADEV 260 Query: 238 MTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLS-SDKKKTFF 296 + G+GRTG +F C I PDIL +SK ++ PL+A L +E+++D S K TF Sbjct: 261 ICGFGRTGNMFGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFG 320 Query: 297 HSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFVNIRQMGTI 356 H + + +P+A A AL NL I E+ ++ RL L + +R +G I Sbjct: 321 HGFTASGHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRALADHPLVGEVRGVGLI 380 Query: 357 VALDF--NVQNKGYF---FDKNAKLKNFFREKKILIRPLGHIMYLMPPYCITATDLDHIY 411 A++ + K F A+ E ++ R +G + PP ITA +D + Sbjct: 381 AAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAMGDTLAFCPPLIITAAQVDEMV 440 Query: 412 NTINEAVD 419 + A+D Sbjct: 441 DRFGRALD 448 >gnl|CDD|180747 PRK06917, PRK06917, hypothetical protein; Provisional. Length = 447 Score = 208 bits (531), Expect = 2e-54 Identities = 135/450 (30%), Positives = 215/450 (47%), Gaps = 59/450 (13%) Query: 4 LHSNYPIWHPFVQHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWV---ITHGHRHPI 60 L YP+ I +G YL D+N +K D SS V I HG + Sbjct: 10 LGQPYPV---------------ISHGKGVYLYDQNGNKYFDG-SSGAVTAGIGHGVKE-- 51 Query: 61 IMNAIRSASENYDQIIF---SEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVAL 117 I +AI+ E +++ F S++T EPAE+LA+ L ++P L + FF +SGS + E A+ Sbjct: 52 IADAIK---EQAEEVSFVYRSQFTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAM 108 Query: 118 KMALGFFNNNNMP-RNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETI--PFP 174 K+A+ F + ++KI+ YHG T+G++S+S + LL D TI P+ Sbjct: 109 KIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYC 168 Query: 175 HHNEEQKTLDDLEKHCST-----------QKIAAFLVEPLILGAGGMQTYRPYILKEFMR 223 + QK + C+T + IAAF+ EP+I AG K Sbjct: 169 YRCPVQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKE 228 Query: 224 ITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIF 283 I YD L IADEVMTG GRTG +FA H + PDI+ L KG+ G P+AAT+ S+ + Sbjct: 229 ICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVM 288 Query: 284 DSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKS 343 + L + H + +ANP++ A ALA L+ EK + E+ L ++ Sbjct: 289 EPILRGSRSIMSGH--TLSANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKVQQ 346 Query: 344 NKKFV-NIRQMGTIVALDFNVQNKGYF--FDKN----AKLKNFFREKKILIRPL------ 390 + ++R G ++ ++F V +K F K+ ++L + + +L+ P Sbjct: 347 QSTIIGDVRGKGLLIGVEF-VADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDG 405 Query: 391 --GHIMYLMPPYCITATDLDHIYNTINEAV 418 G + + PP IT ++LD + + ++V Sbjct: 406 KEGDAVIIAPPMTITYSELDELLSIFAKSV 435 >gnl|CDD|180996 PRK07483, PRK07483, hypothetical protein; Provisional. Length = 443 Score = 207 bits (529), Expect = 5e-54 Identities = 130/451 (28%), Positives = 211/451 (46%), Gaps = 60/451 (13%) Query: 12 HPFVQHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASEN 71 H F + T + EG YLID + +DA V GH HP ++ AI Sbjct: 3 HVFHRS-PRATLPVAVAGEGIYLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIH---AQ 58 Query: 72 YDQIIF---SEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNN 128 D++ + S +T EPAE LA L+ AP GL++V+F GS ++E ALK+A +F Sbjct: 59 IDRLAYAHTSFFTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEAALKLARQYFVEIG 118 Query: 129 MP-RNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETI-P-FPHHNEE------ 179 P R + YHG+T+G++++ + PLL + + P + + + Sbjct: 119 QPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDE 178 Query: 180 ---QKTLDDLEKHCSTQKI--------AAFLVEPLILGAGGMQTYRPYILKEFMRITKKY 228 Q+ D+LE KI AAF+ E ++ G P K + +Y Sbjct: 179 AYGQRLADELE-----AKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRY 233 Query: 229 DTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLS 288 LLI DEVM G GRTG +FAC + PD++ ++KG+ G P+ A L S+ I+D+ Sbjct: 234 GVLLILDEVMCGMGRTGTLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDA--I 291 Query: 289 SDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKN----LERMHADRLSLLKSN 344 +D F H +Y + ACAAALA ++ ++ ++ ++ L +RL Sbjct: 292 ADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERL----GQ 347 Query: 345 KKFV-NIRQMGTIVALDFNVQNKGYF--FDK----NAKLKNFFREKKILIRPLG------ 391 V +IR G V ++ V ++ FD +A++K + +++ P+G Sbjct: 348 HPHVGDIRGRGLFVGVEL-VADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGV 406 Query: 392 ---HIMYLMPPYCITATDLDHIYNTINEAVD 419 H++ L PP+ ITA +D I + +A+D Sbjct: 407 RGDHVL-LAPPFIITAAQIDEIVERLGDAID 436 >gnl|CDD|162005 TIGR00707, argD, acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097). Length = 379 Score = 206 bits (526), Expect = 1e-53 Identities = 132/401 (32%), Positives = 206/401 (51%), Gaps = 39/401 (9%) Query: 25 KIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSE--YTH 82 KI++ +G+Y+ D N + +D ++ V + GH HP ++ A++ E ++++ Y Sbjct: 12 KIVRGKGAYVYDVNGKEYLDFVAGIAVNSLGHAHPKLVEALK---EQLEKLVHVSNLYYT 68 Query: 83 EPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYH 142 EP E+LA L++ + G VFF +SG+ + E ALK+A + + + KI+ E+ +H Sbjct: 69 EPQEELAEKLVEHS--GADRVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFH 126 Query: 143 GDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLVEP 202 G T+G++S + + + +EPL+ P+ +K +DD + AA +VEP Sbjct: 127 GRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDD--------ETAAVIVEP 178 Query: 203 LILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCL 262 I G GG+ LK I K D LLI DEV TG GRTGK FA H I PDI+ L Sbjct: 179 -IQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDIITL 237 Query: 263 SKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEP 322 +KG+ GG +P+ ATL EE+ ++ D H S++ NP+ACAAALA L++ EKE Sbjct: 238 AKGL-GGGVPIGATLAKEEVAEAFTPGD------HGSTFGGNPLACAAALAVLEVIEKER 290 Query: 323 VIERIKNLERMHADRLSLLKSNKKFVNIRQMGTIVALDFNVQNKGYFFDKNAKLKNFFRE 382 ++E +K +RL L N +R G ++ ++ K K E Sbjct: 291 LLENVKEKGDYFKERLEELGKNYPNKEVRGKGLMLGIELEAPCKDIV----KKA----LE 342 Query: 383 KKILIRPLG-HIMYLMPPYCITATDLDHIYNTINEAVDFLE 422 K +L+ G ++ +PP IT I+EAV LE Sbjct: 343 KGLLVNCAGPKVLRFLPPLIITK-------EEIDEAVSALE 376 >gnl|CDD|168777 PRK07036, PRK07036, hypothetical protein; Provisional. Length = 466 Score = 204 bits (521), Expect = 3e-53 Identities = 122/422 (28%), Positives = 201/422 (47%), Gaps = 37/422 (8%) Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQII-------FS 78 I++ EG Y+ D + + +D I W + G+ + +AI DQ F Sbjct: 37 IVEAEGIYVTDADGRRYLDGIGGMWCVNVGYGREEMADAIA------DQARRLPYYTPFG 90 Query: 79 EYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNK-IVVM 137 + T+ PA +LA L ++AP L +VF + GST+++ AL+ +FN P K I+ Sbjct: 91 DMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITR 150 Query: 138 EHGYHGDTIGSMSVSMRGAFNNSYEPL--LFDVETIPFPHHNEEQKTLDDLEK------- 188 YHG T + S++ + A ++ L + P P+ + Sbjct: 151 GDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFE 210 Query: 189 ----HCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRT 244 IAAF+ EP ILG+GG+ P I ++YD L I+DEV+TG+GR Sbjct: 211 DKILSLGADNIAAFIAEP-ILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRL 269 Query: 245 GKIFAC-NHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLS--SDKKKTFFHSSSY 301 G FA I PDI+ +KG+T G PL A + SE + D +S + K F H +Y Sbjct: 270 GHFFASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDV-ISGPNAKGNVFTHGFTY 328 Query: 302 TANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFVNIRQMGTIVALDF 361 + +P+ACAAAL N++I E+E + E ++ + +RL+ L+ ++R + ++ Sbjct: 329 SGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVEC 388 Query: 362 --NVQNKGYFFDKNA---KLKNFFREKKILIRPLGHIMYLMPPYCITATDLDHIYNTINE 416 + +K + A ++ +E+ +L+RPL H+ L PP IT +D I + Sbjct: 389 VADKGSKALLPEDIAIGQRIDRHCQERGLLVRPLEHLCVLSPPLIITRAQIDEIVAILRA 448 Query: 417 AV 418 A+ Sbjct: 449 AI 450 >gnl|CDD|183175 PRK11522, PRK11522, putrescine--2-oxoglutarate aminotransferase; Provisional. Length = 459 Score = 202 bits (516), Expect = 1e-52 Identities = 112/393 (28%), Positives = 196/393 (49%), Gaps = 25/393 (6%) Query: 32 SYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAE-QLAR 90 + L+D + ID + + + GHR+P++++A+++ Q + S+ +P LA+ Sbjct: 74 NTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAK--QPLHSQELLDPLRAMLAK 131 Query: 91 LLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKI--VVMEHGYHGDTIGS 148 L + P L+Y FF +SG+ S+E ALK+A + PR K + +HG ++G+ Sbjct: 132 TLAALTPGKLKYSFFCNSGTESVEAALKLAKAY----QSPRGKFTFIATSGAFHGKSLGA 187 Query: 149 MSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLVEPLILGAG 208 +S + + F + PLL +PF + + L + +K + +AA ++EP I G G Sbjct: 188 LSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKK--TGDDVAAVILEP-IQGEG 244 Query: 209 GMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITG 268 G+ L ++ ++ LLI DEV TG GRTGK+FAC H ++ PDILCL+K + G Sbjct: 245 GVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGG 304 Query: 269 GALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIK 328 G +P+ AT+ +EE+F S F H++++ NP+ACAAALA + + ++ + + + Sbjct: 305 GVMPIGATIATEEVF----SVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAE 360 Query: 329 NLERMHADRLSLLKSN--KKFVNIRQMGTIVALDFNVQNKGYFFDKNAKLKNFFREKKIL 386 D L R G ++A++F GY F FR++ ++ Sbjct: 361 QKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNEIGYNFA-----SEMFRQRVLV 415 Query: 387 IRPL--GHIMYLMPPYCITATDLDHIYNTINEA 417 L + + PP +T + + +A Sbjct: 416 AGTLNNAKTIRIEPPLTLTIEQCEQVLKAARKA 448 >gnl|CDD|180248 PRK05769, PRK05769, 4-aminobutyrate aminotransferase; Provisional. Length = 441 Score = 198 bits (507), Expect = 2e-51 Identities = 121/398 (30%), Positives = 197/398 (49%), Gaps = 70/398 (17%) Query: 11 WHPFVQHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASE 70 W+P V I + EG ++ D + + +D + V GH HP ++ A++ +E Sbjct: 35 WYPLV----------IERGEGVWVEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAE 84 Query: 71 NYDQIIFSEYTHEPAEQLARLLIKIAPLGLQY-VFFSDSGSTSIEVALKMALGFFNNNNM 129 + +++ +EPA +LA L++IAP G + VFF++SG+ S E A+K+A + Sbjct: 85 KFLHYSLTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIA-----RYHT 139 Query: 130 PRNKIVVMEHGYHGDTIGSMS------VSMRGAFNNSYEPLLFDVETIPFPH------HN 177 R I+ +HG T GS+S V +G F PL+ V +P+P+ Sbjct: 140 GRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFF-----PLMPGVIHVPYPNPYRNPWGI 194 Query: 178 EE-----QKTLDDLE-----KHCSTQKIAAFLVEPLILGAGGMQTYRPYI------LKEF 221 E LD +E K +++AA +VEP I G GG Y+ KE Sbjct: 195 ENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEP-IQGEGG------YVVPPKNFFKEL 247 Query: 222 MRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEE 281 ++ KY LLI DEV TG GRTGK+FA H + PDI+ L+K I GG LPL A + E Sbjct: 248 RKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIITLAKAIAGG-LPLGAVIGRAE 306 Query: 282 IFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLL 341 + H++++ NP+A AAALA L+ E+ ++E + L L L Sbjct: 307 L-------MFLPPGSHANTFGGNPVAAAAALATLEELEEG-LLENAQKLGEYLRKELKEL 358 Query: 342 KSNKKFV-NIRQMGTIVALDFNVQNKGYFFDKNAKLKN 378 K +F+ ++R +G ++ ++ V+++ + + KL++ Sbjct: 359 KEKYEFIGDVRGLGLMIGVEL-VKDRK---EPDPKLRD 392 >gnl|CDD|180994 PRK07480, PRK07480, putative aminotransferase; Validated. Length = 456 Score = 198 bits (506), Expect = 2e-51 Identities = 126/429 (29%), Positives = 213/429 (49%), Gaps = 52/429 (12%) Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGH-RHPIIMNAIRSASE----NYDQIIFSEY 80 I + EG YL D +KI+D ++ W + G+ R + A R E N F + Sbjct: 36 ITRAEGVYLWDSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYN----TFFKT 91 Query: 81 THEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVV-MEH 139 TH PA +LA L ++AP G +VFF++SGS + + L+M ++ P+ K+++ ++ Sbjct: 92 THPPAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKN 151 Query: 140 GYHGDTIGSMSVS-MRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDD----------LEK 188 GYHG T+ S+ M+ P+ + I P+ E + LE Sbjct: 152 GYHGSTVAGASLGGMKYMHEQGDLPIP-GIVHIDQPYWFGEGGDMTPEEFGLAAARQLEA 210 Query: 189 ---HCSTQKIAAFLVEPLILGAGGM----QTYRPYILKEFMRITKKYDTLLIADEVMTGW 241 +AAF+ EP I GAGG+ TY P E RI +KYD LL+ADEV+ G+ Sbjct: 211 KILELGADNVAAFIGEP-IQGAGGVIIPPATYWP----EIQRICRKYDILLVADEVICGF 265 Query: 242 GRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSY 301 GRTG+ F H I PD++ ++KG+T G +P+ A + + + + + F H +Y Sbjct: 266 GRTGEWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIE--EGGEFNHGFTY 323 Query: 302 TANPIACAAALANLQIWEKEPVIERIKN-----LERMHADRLSLLKSNKKFVNIRQMGTI 356 + +P+A A ALANL+I E ++ER+++ L++ RL L + +R +G + Sbjct: 324 SGHPVAAAVALANLRILRDEGIVERVRDDTGPYLQK----RLRELADHPLVGEVRGVGLV 379 Query: 357 VALDFNVQNKG--YFFDKNAKL----KNFFREKKILIRPLGHIMYLMPPYCITATDLDHI 410 A++ V++K F+ + ++ +++R +G M + PP IT ++D + Sbjct: 380 GAIEL-VKDKATRERFEAGGGVGTICRDHCFANGLIMRAVGDRMIISPPLVITHAEIDEL 438 Query: 411 YNTINEAVD 419 +A+D Sbjct: 439 VEKARKALD 447 >gnl|CDD|181078 PRK07678, PRK07678, aminotransferase; Validated. Length = 451 Score = 196 bits (501), Expect = 7e-51 Identities = 132/446 (29%), Positives = 218/446 (48%), Gaps = 51/446 (11%) Query: 10 IWHPFVQHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSAS 69 +WH + N T + K EG+++ D ++ +D +S W + G+ + A Sbjct: 18 VWHGMKPYNPNATMV-VAKAEGAWVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAA---- 72 Query: 70 ENYDQIIFSEY-----THEPAEQLARLLIKIAP-LGLQYV-FFSDSGSTSIEVALKMALG 122 Y+Q+ Y +HEPA +LA K+ LG +YV FFS+SGS + E A K+A Sbjct: 73 --YEQLKTLSYFPLTQSHEPAIKLAE---KLNEWLGGEYVIFFSNSGSEANETAFKIARQ 127 Query: 123 FFNNNNMP-RNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLL--FDVETIPFPHHNEE 179 + P R K + YHG+++G+++ + + YEPL F P + Sbjct: 128 YHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPG 187 Query: 180 QKTLDDLEKHCS-----------TQKIAAFLVEPLILGAGGM---QTYRPYILKEFMRIT 225 ++ D + C ++ IAA ++EP+I G G + Q Y +K I Sbjct: 188 IESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDY----MKAVKEIC 243 Query: 226 KKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDS 285 +K+ LLI+DEV+ G+GRTGK F + + PDI+ ++KGIT LPL+AT +EI+++ Sbjct: 244 QKHGALLISDEVICGFGRTGKAFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEA 303 Query: 286 HLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNL-ERMHADRLSLLKSN 344 + + F H +++ NP ACA AL NL+I E E +IER L E + L + Sbjct: 304 FKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEH 363 Query: 345 KKFVNIRQMGTIVALDFNVQNKG----YFFDKNAKLKNFFREKKILIRPLG-------HI 393 +IR G +V ++ V +K DK A + +EK ++I G ++ Sbjct: 364 PLVGDIRGKGLLVGIEL-VNDKETKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNV 422 Query: 394 MYLMPPYCITATDLDHIYNTINEAVD 419 + L PP I++ ++ I T+ A++ Sbjct: 423 LTLSPPLVISSEEIAFIVGTLKTALE 448 >gnl|CDD|185461 PTZ00125, PTZ00125, ornithine aminotransferase-like protein; Provisional. Length = 400 Score = 191 bits (487), Expect = 3e-49 Identities = 112/403 (27%), Positives = 190/403 (47%), Gaps = 32/403 (7%) Query: 28 KTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENY---DQIIFSEYTHEP 84 + +G ++ D K D +S++ + GH HP I+ A+ + ++ + +++ Sbjct: 19 RGKGVFVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRAFYNDVLGLA 78 Query: 85 AEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGF-FNNNNMPRN--KIVVMEHGY 141 + + L G V +SG+ + E ALK A + + +P N KI+ + Sbjct: 79 EKYITDLF------GYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNF 132 Query: 142 HGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLVE 201 G TIG+ S S N++ P + E + + ++ LEK +AAF+VE Sbjct: 133 SGRTIGACSASTDPKCYNNFGPFVPGFELVDY-------NDVEALEKLLQDPNVAAFIVE 185 Query: 202 PLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILC 261 P I G G+ LK+ + KKY+ LLI DE+ TG GRTGK+ A +H + PDI+ Sbjct: 186 P-IQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIVL 244 Query: 262 LSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKE 321 L K ++GG P++A L ++++ + H S+Y NP+ACA A+ L++ ++E Sbjct: 245 LGKALSGGLYPISAVLANDDVMLVIKPGE------HGSTYGGNPLACAVAVEALEVLKEE 298 Query: 322 PVIERIKNLERMHADRLSLLKSNKKFVN-IRQMGTIVALDFNVQNKGYFFDKNAKLKNFF 380 + E + L + D L L +V IR G + A+ F+ + +D KLK Sbjct: 299 KLAENAQRLGEVFRDGLKELLKKSPWVKEIRGKGLLNAIVFDHSDGVNAWDLCLKLK--- 355 Query: 381 REKKILIRPLG-HIMYLMPPYCITATDLDHIYNTINEAVDFLE 422 E +L +P +I+ PP IT LD I + + + Sbjct: 356 -ENGLLAKPTHDNIIRFAPPLVITKEQLDQALEIIKKVLKSFD 397 >gnl|CDD|178557 PLN02974, PLN02974, adenosylmethionine-8-amino-7-oxononanoate transaminase. Length = 817 Score = 191 bits (486), Expect = 4e-49 Identities = 140/490 (28%), Positives = 206/490 (42%), Gaps = 113/490 (23%) Query: 10 IWHPFVQHFCNPTFKKIIKTEGSYLID-----------ENHDKII------DAISSWWVI 52 +W PF QH ++ + +ID + DA +SWW Sbjct: 325 LWWPFTQH-------ALVPRDSVTVIDSRCGEDFSVYKPKTNSTCSIVQQFDACASWW-- 375 Query: 53 THG---HRHPIIMNAIRSASENYDQIIFSEYTHEPAEQLARLLIKIAPLG-LQYVFFSDS 108 T G P + A+ A+ Y ++F E HEPA + A LL+ G VFFSD+ Sbjct: 376 TQGPDPTLQPELARAVAYAAGRYGHVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDN 435 Query: 109 GSTSIEVALKMAL-------GFFNNNNMPRN-------KIVVMEHGYHGDTIGSMSVSMR 154 GST+IEVALKMA GF N+ + K++ ++ YHGDT+G+M Sbjct: 436 GSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAP 495 Query: 155 GAFNNS-----YEP--LLFDVET---------IPFPHHNEEQ------------------ 180 F Y L D T I P Sbjct: 496 SVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKT 555 Query: 181 ---------------KTLDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRIT 225 + LD+ E IAA ++EP++ GAGGM P + +++ Sbjct: 556 RDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVC 615 Query: 226 KKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDS 285 + +I DEV TG R G A PDI C +K +TGG +PLAATL +EE+F++ Sbjct: 616 RSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEA 675 Query: 286 HLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEP-----VIERIKNLERM-----HA 335 K H SYTA+P+ CAAA LQ W K+P +I L R Sbjct: 676 FRGPSKLDALLHGHSYTAHPMGCAAAAKALQ-WYKDPSTNPNLIPPGSRL-RELWDEELV 733 Query: 336 DRLSLLKSNKKFVNIRQMGTIVALDFNVQ--NKGY--FFDKNAKLKNFFREKKILIRPLG 391 +S L + ++ V++ GT++AL+ + + GY + ++ ++ RE I RPLG Sbjct: 734 RAISSLPNVERVVSL---GTVLALELDAEGSGSGYSSLYARSV-VRRLRREDGIYARPLG 789 Query: 392 HIMYLMPPYC 401 +++YLM Sbjct: 790 NVVYLMCGPT 799 >gnl|CDD|132415 TIGR03372, putres_am_tran, putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine. Length = 442 Score = 187 bits (476), Expect = 4e-48 Identities = 118/412 (28%), Positives = 196/412 (47%), Gaps = 40/412 (9%) Query: 14 FVQHFCNPTF---KKIIKTEGSY------------LIDENHDKIIDAISSWWVITHGHRH 58 + NP F +K + G Y LID ++ ID + + + GHR+ Sbjct: 34 CFKEHVNPGFLEYRKSVTAGGDYGAVEWQAGGLNTLIDTQGNEFIDCLGGFGIFNVGHRN 93 Query: 59 PIIMNAIRSASENYDQIIFSEYTHEPAE-QLARLLIKIAPLGLQYVFFSDSGSTSIEVAL 117 P ++ A+ + Q + S+ +P LA+ L + P L+Y FF +SG+ S+E AL Sbjct: 94 PNVIAAVENQLAK--QPLHSQELLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAAL 151 Query: 118 KMALGFFNNNNMPRNK--IVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPH 175 K+A + PR K + +HG ++G++S + + AF + PLL + F Sbjct: 152 KLAKAY----QSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGD 207 Query: 176 HNEEQKTLDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIAD 235 K L++ +K + +AA ++EP I G GG+ L + ++ LLI D Sbjct: 208 IEAMLKALNECKK--TGDDVAAIILEP-IQGEGGVILPPEGYLPAVRALCDEFGALLILD 264 Query: 236 EVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTF 295 EV TG GRTGK+FAC H + PDILCL+K + GG +P+ AT+ +E +F + F Sbjct: 265 EVQTGMGRTGKMFACEHEGVQPDILCLAKALGGGVMPIGATIATEAVFSVLFDN----PF 320 Query: 296 FHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSN--KKFVNIRQM 353 H++++ NP+ACAAALA + ++ + + D L + + R Sbjct: 321 LHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGK 380 Query: 354 GTIVALDFNVQNKGYFFDKNAKLKNFFREKKILIRPLGH--IMYLMPPYCIT 403 G ++A++F GY F K F++ ++ L + + + PP IT Sbjct: 381 GLLMAIEFRDNEIGYAF-----AKELFQQNILVAGTLNNAKSIRIEPPLTIT 427 >gnl|CDD|180611 PRK06541, PRK06541, hypothetical protein; Provisional. Length = 460 Score = 178 bits (454), Expect = 2e-45 Identities = 95/327 (29%), Positives = 164/327 (50%), Gaps = 30/327 (9%) Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFS---EYTH 82 I++ EG Y+ D+ + +D ++ +V+ GH + A A++ + F Y H Sbjct: 38 IVRGEGCYIWDDRGKRYLDGLAGLFVVQVGHGRAELAEA---AAKQAGTLAFFPLWSYAH 94 Query: 83 EPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMP-RNKIVVMEHGY 141 PA +LA L +AP L VFF+ GS ++E A K+A +F P ++K++ Y Sbjct: 95 PPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAY 154 Query: 142 HGDTIGSMSVSMRGAFNNSYEPLLFDVETIP------FPHHNEEQKTLDDLEKHCSTQ-- 193 HG T G+++++ AF +EPL+ +P P ++ + + + + Sbjct: 155 HGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAF---GRWAADRIE 211 Query: 194 ---------KIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRT 244 +AA +EP+ AGG P + I +YD LL++DEV+ +GR Sbjct: 212 EAIEFEGPDTVAAVFLEPV-QNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRL 270 Query: 245 GKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTAN 304 G++F C PDI+ +KGIT G PL A + S+ +F+ L D F H ++ + Sbjct: 271 GEMFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFL--DGPTMFLHGYTFGGH 328 Query: 305 PIACAAALANLQIWEKEPVIERIKNLE 331 P++ A ALANL I+E+E +++ +++ E Sbjct: 329 PVSAAVALANLDIFEREGLLDHVRDNE 355 >gnl|CDD|178360 PLN02760, PLN02760, 4-aminobutyrate:pyruvate transaminase. Length = 504 Score = 173 bits (440), Expect = 7e-44 Identities = 125/432 (28%), Positives = 213/432 (49%), Gaps = 56/432 (12%) Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSE----YT 81 I K+EGSY+ D N K +DA++ W G P ++ A A+E +++ F T Sbjct: 75 IEKSEGSYVYDINGKKYLDALAGLWCTALGGSEPRLVAA---ATEQLNKLPFYHSFWNRT 131 Query: 82 HEPAEQLARLLIKI-APLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPR---NKIVVM 137 +P+ LA+ L+++ + VFF++SGS + + +K+ ++ NN + R K + Sbjct: 132 TKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLV--WYYNNALGRPNKKKFIAR 189 Query: 138 EHGYHGDTIGSMSVSMRGAFNNSYE-PLLFDVET-------IPFPHHNEEQ---KTLDDL 186 YHG T+ S S+S A + ++ P F + T P EE+ + D+L Sbjct: 190 SKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNL 249 Query: 187 EKHCSTQ---KIAAFLVEPLILGAGGM----QTYRPYILKEFMRITKKYDTLLIADEVMT 239 E + IAAF+ EP++ GAGG+ TY ++ + KKYD L IADEV+ Sbjct: 250 ENLILKEGPETIAAFIAEPVM-GAGGVIPPPATY----FEKIQAVLKKYDILFIADEVIC 304 Query: 240 GWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDS-HLSSDKKKTFFHS 298 +GR G +F C+ +I PD++ L+K ++ +P+ A L S EI D H S+K +F H Sbjct: 305 AFGRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFAHG 364 Query: 299 SSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFVNIRQMGTIVA 358 +Y+ +P++CA AL L+I+++ + E + + D + + IR G I+ Sbjct: 365 FTYSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILG 424 Query: 359 LDFNVQNK------------GYFFDKNAKLKNFFREKKILIRPLGHIMYLMPPYCITATD 406 +F V NK G +F K ++ +L+R G + + PP IT + Sbjct: 425 TEF-VDNKSPNDPFPAEWGVGAYFGAECK------KRGMLVRVAGDNIMMSPPLIITPEE 477 Query: 407 LDHIYNTINEAV 418 +D + + +A+ Sbjct: 478 VDELISIYGKAL 489 >gnl|CDD|180390 PRK06082, PRK06082, 4-aminobutyrate aminotransferase; Provisional. Length = 459 Score = 171 bits (435), Expect = 3e-43 Identities = 118/440 (26%), Positives = 195/440 (44%), Gaps = 75/440 (17%) Query: 16 QHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHG-------HRHPIIMNAIRSA 68 Q P + EG Y+ D + K +D HG + HP ++ ++ Sbjct: 48 QAMSTPCLDVLASAEGIYIEDVDGKKYMD--------FHGNNVHQLGYGHPHVIEKVK-- 97 Query: 69 SENYDQIIFS--EYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNN 126 E ++ FS +T+E A + A L +IA L V F+ G+++I +ALK+A N Sbjct: 98 -EQMAKLPFSPRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHITGN 156 Query: 127 NNMPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIP--------FPHHNE 178 K+V + +HG ++ ++SV F PL+ VE IP FP + Sbjct: 157 F-----KVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADG 211 Query: 179 EQKTLDD-----LEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLI 233 D +EK I AF+ E + +Q K I K++ LLI Sbjct: 212 SDVHYADYLEYVIEKEGG---IGAFIAEAV--RNTDVQVPSKAYWKRVREICDKHNVLLI 266 Query: 234 ADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKK 293 DE+ G GRTG+ F I PDILC+ KG+ GG +P+AA ++ DK Sbjct: 267 IDEIPNGMGRTGEWFTHQAYGIEPDILCIGKGLGGGLVPIAAM----------ITKDKYN 316 Query: 294 TFFHSS--SYT--ANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFV- 348 T S YT +P+ CAAALA +++ E+E ++E++K + +RL +K+ + Sbjct: 317 TAAQISLGHYTHEKSPLGCAAALATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLIG 376 Query: 349 NIRQMGTIVALDFNVQNKGYFFDKNAKLKNFFREKKILIRPL----------GHIMYLMP 398 ++R +G + ++ D++ K + + + +L R L G+++ L P Sbjct: 377 DVRGIGLLWGVELVT-------DRHTKERAYDEAEAVLYRCLNNGLSFKVSQGNVIQLSP 429 Query: 399 PYCITATDLDHIYNTINEAV 418 P IT +L + EA+ Sbjct: 430 PLIITREELTQALAILEEAI 449 >gnl|CDD|179270 PRK01278, argD, acetylornithine transaminase protein; Provisional. Length = 389 Score = 171 bits (435), Expect = 4e-43 Identities = 116/408 (28%), Positives = 187/408 (45%), Gaps = 60/408 (14%) Query: 30 EGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASE------NYDQIIFSEYTHE 83 EG +LIDE+ ++ +D S V + GH HP ++ A++ +E N Y Sbjct: 21 EGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNL-------YRIP 73 Query: 84 PAEQLARLLIKI--APLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMP-RNKIVVMEHG 140 E+LA L++ A VFF++SG+ ++E A+K A + P R +I+ E Sbjct: 74 EQERLAERLVENSFA----DKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGA 129 Query: 141 YHGDTIGSMSVSMRGAFNNSYEPLL--FDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAF 198 +HG T+ +++ + + + PL+ FD +PF + + AA Sbjct: 130 FHGRTLATIAAGGQEKYLEGFGPLVPGFDQ--VPFGDIEALKAAITP--------NTAAI 179 Query: 199 LVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPD 258 L+EP I G GG++ LK ++ + LLI DEV G GRTGK+FA A +TPD Sbjct: 180 LIEP-IQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPD 238 Query: 259 ILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTF-FHSSSYTANPIACAAALANLQI 317 I+ ++KGI GG PL A L +EE + T H S+Y NP+A A A L + Sbjct: 239 IMAVAKGI-GGGFPLGACLATEEA-AKGM------TPGTHGSTYGGNPLAMAVGNAVLDV 290 Query: 318 WEKEPVIERIKNLERMHADRLSLLKSN--KKFVNIRQMGTIVALDFNVQNKGYFFDKNAK 375 ++ ++ + +L L +R G ++ L V N Sbjct: 291 ILAPGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVVP--------NRD 342 Query: 376 LKNFFREKKILIRPLG-HIMYLMPPYCITATDLDHIYNTINEAVDFLE 422 L R++ +L G +++ L+PP IT + I+EA++ LE Sbjct: 343 LVQALRDEGLLTVGAGDNVVRLLPPLIITEEE-------IDEALERLE 383 >gnl|CDD|130940 TIGR01885, Orn_aminotrans, ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis. Length = 401 Score = 170 bits (433), Expect = 7e-43 Identities = 114/398 (28%), Positives = 201/398 (50%), Gaps = 27/398 (6%) Query: 28 KTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTH-EPAE 86 K EG ++ D + +D +S++ + GH HP I+ A+ ++ + S + + Sbjct: 25 KAEGVHVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKL--TLSSRAFYNDVFG 82 Query: 87 QLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGF-FNNNNMPRNK--IVVMEHGYHG 143 + A + K+ G V ++G+ ++E A+K+A + + +P N+ IV + +HG Sbjct: 83 EFAEYVTKL--FGYDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHG 140 Query: 144 DTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLVEPL 203 T+G++S+S ++ P + + IP+ + ++ L+D + + AF+VEP Sbjct: 141 RTLGAISMSTDPDSRTNFGPYVPGFKKIPYNNLEALEEALEDHGPN-----VCAFIVEP- 194 Query: 204 ILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLS 263 I G G+ LK+ + K++ LLIADE+ TG GRTGK+ +H ++ PDI+ L Sbjct: 195 IQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIVLLG 254 Query: 264 KGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPV 323 K ++GG P++A L +++ + K H S+Y NP+ACA A+A L++ E+E + Sbjct: 255 KALSGGVYPVSAVLADDDVMLT------IKPGEHGSTYGGNPLACAVAVAALEVLEEEKL 308 Query: 324 IERIKNLERMHADRLSLLKSNKKFVNIRQMGTIVALDFNVQNKGY-FFDKNAKLKNFFRE 382 E + L + D+L L +R G + A+ + G +D KLK E Sbjct: 309 AENAEKLGEIFRDQLKKLPKP-IITEVRGRGLLNAIVIDESKTGRTAWDLCLKLK----E 363 Query: 383 KKILIRPL-GHIMYLMPPYCITATDLDHIYNTINEAVD 419 K +L +P G+I+ L PP IT LD I + +D Sbjct: 364 KGLLAKPTHGNIIRLAPPLVITEEQLDEGLEIIKKVID 401 >gnl|CDD|179555 PRK03244, argD, acetylornithine aminotransferase; Provisional. Length = 398 Score = 166 bits (423), Expect = 9e-42 Identities = 108/393 (27%), Positives = 169/393 (43%), Gaps = 57/393 (14%) Query: 30 EGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSA------SENYDQIIFSEYTHE 83 EG+ + D + + +D + V GH HP ++ A+ N + E Sbjct: 33 EGAVVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNL-------FATE 85 Query: 84 PAEQLARLLIKIAPLGLQ-YVFFSDSGSTSIEVALKMA--LGFFNNNNMPRNKIVVMEHG 140 P LA L+++ VFF +SG+ + E A K+A G R KIV E G Sbjct: 86 PQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLTG--------RTKIVAAEGG 137 Query: 141 YHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLV 200 +HG T+G+++++ + A +EPL VE +P+ +D L AA + Sbjct: 138 FHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYG-------DVDALAAAVDDD-TAAVFL 189 Query: 201 EPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDIL 260 EP I G G+ L IT ++ LL+ DEV TG GRTG FA H +TPD++ Sbjct: 190 EP-IQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDVV 248 Query: 261 CLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFF----HSSSYTANPIACAAALANLQ 316 L+KG+ GG LP+ A L+ H S++ NP+ACAAALA L Sbjct: 249 TLAKGL-GGGLPIGAC----------LAFGPAADLLTPGLHGSTFGGNPVACAAALAVLD 297 Query: 317 IWEKEPVIERIKNLERMHADRLSLLKSNKKFVNIRQMGTIVALDFNVQNKGYFFDKNAKL 376 E ++E + L + L + ++R G ++ + + Sbjct: 298 TIASEGLLENAERLGEQLRAGIEAL-GHPLVDHVRGRGLLLGIVLTA-------PVAKAV 349 Query: 377 KNFFREKKILIRPLG-HIMYLMPPYCITATDLD 408 + RE L+ + ++ L PP IT +D Sbjct: 350 EAAAREAGFLVNAVAPDVIRLAPPLIITDAQVD 382 >gnl|CDD|180995 PRK07482, PRK07482, hypothetical protein; Provisional. Length = 461 Score = 165 bits (420), Expect = 2e-41 Identities = 130/456 (28%), Positives = 210/456 (46%), Gaps = 68/456 (14%) Query: 12 HPFV---QHFCNPTFKKIIKT-EGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRS 67 HP H +I++ EG + D + IDA + + + G+ + AI Sbjct: 18 HPSTHLGDHARGELPGRIVEGGEGIRITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAI-- 75 Query: 68 ASENYDQIIFSEYTH-------EPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMA 120 +Q Y H E + L++ +I AP G+ V++ SGS + E +K Sbjct: 76 ----AEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIK-- 129 Query: 121 LGFFNNNNMPR---NKIVVMEHGYHGDTIGSMSVSMRG--AFNNSYEPLLFDVETIPFPH 175 L ++ NN + R KI+ GYHG + ++ S+ G F+ ++ + V PH Sbjct: 130 LVWYYNNVLGRPEKKKIISRWRGYHGSGV--VTGSLTGLSLFHQHFDLPIARVLHTEAPH 187 Query: 176 H--------NEEQ---KTLDDLEKHCSTQ---KIAAFLVEPLILGAGGM----QTYRPYI 217 + +EEQ D+LE+ + IAAF+ EP +LG GG+ Y P I Sbjct: 188 YYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEP-VLGTGGIVPPPAGYWPAI 246 Query: 218 LKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATL 277 + KKYD LLIADEV+TG+GR G +F +H I PD++ ++KG+T PL+ ++ Sbjct: 247 QA----VLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLITVAKGLTSAYAPLSGSI 302 Query: 278 CSEEIFDSHLS-SDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKN-----LE 331 E+++D SD+ H +Y+ +PI AAALANL I E+E ++ Sbjct: 303 VGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERENLVGNAAEVGAYFRA 362 Query: 332 RMHADRLSLLKSNKKFVNIRQMGTIVALDFNVQNKG--YFFDKNAKL----KNFFREKKI 385 R+ A + +R +G + A++F V ++ FD K+ E+ + Sbjct: 363 RLRAA----FGDHPLVGEVRGVGMLAAVEF-VADRDDRTPFDPALKIGPQVSAAALERGV 417 Query: 386 LIR--PLGHIMYLMPPYCITATDLDHIYNTINEAVD 419 + R P G I+ PP +T + D I +AVD Sbjct: 418 IARAMPHGDILGFAPPLVLTRAEADEIVAIAKDAVD 453 >gnl|CDD|129783 TIGR00700, GABAtrnsam, 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase. Length = 420 Score = 164 bits (417), Expect = 3e-41 Identities = 104/359 (28%), Positives = 176/359 (49%), Gaps = 31/359 (8%) Query: 20 NPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSE 79 P F + EG+ L D + +++ID S V+ GH HP +++A+R+ + F Sbjct: 15 LPVF--AARAEGAILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMV 72 Query: 80 YTHEPAEQLARLLIKIAPL-GLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVME 138 +E LA L +IAP G + F +SG+ ++E A+K+A + R +V + Sbjct: 73 TPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSY-----TGRPGVVAFD 127 Query: 139 HGYHGDTIGSMSVSMRGA-FNNSYEPLLFDVETIPFPHH-----NEEQKTLDDLEK---- 188 HG+HG T +M+++ + + + + P +V P P+ ++Q + D Sbjct: 128 HGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARA 187 Query: 189 ----HCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRT 244 +AA ++EP + G GG + + +++ + IADEV TG+ RT Sbjct: 188 IFVIDVGANNVAALVIEP-VQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFART 246 Query: 245 GKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTAN 304 G +FAC H PD++ +K + G LPL+ EI D+ T Y N Sbjct: 247 GAMFACEHEGPEPDLITTAKSLADG-LPLSGVTGRAEIMDAPAPGGLGGT------YAGN 299 Query: 305 PIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFV-NIRQMGTIVALDFN 362 P+ACAAALA L I E E +IER + + R+ DRL+ LK+ + ++R +G ++A++ Sbjct: 300 PLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPRIGDVRGLGAMIAVELV 358 >gnl|CDD|181401 PRK08360, PRK08360, 4-aminobutyrate aminotransferase; Provisional. Length = 443 Score = 163 bits (413), Expect = 1e-40 Identities = 115/427 (26%), Positives = 192/427 (44%), Gaps = 55/427 (12%) Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPA 85 +K E + + D ++ ID +S V GH +P ++ AI+ ++ Sbjct: 27 PVKAENAKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPIYGFPVEP 86 Query: 86 EQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDT 145 LA LI+IAP V F SGS + + A+K A + R KI+ Y+G T Sbjct: 87 LLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAY-----TKRRKILSYLRSYYGST 141 Query: 146 IGSMSVS-----MRGAFNNSYEPLLFDVETIPFPH-------HNEEQKTLDDLEK----- 188 G+MS++ +R L DV IP+P ++ +E Sbjct: 142 YGAMSLTGLDFPVRALVGE-----LSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKF 196 Query: 189 --HCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGK 246 + +AA EP I G GM K+ +I ++ LL+ DEV +G GRTGK Sbjct: 197 EGEVYAEGVAALFAEP-IQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGK 255 Query: 247 IFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPI 306 FA H + PDI+ L K + GG LP++AT+ EI DS H+ + + NP+ Sbjct: 256 WFAIEHFGVEPDIITLGKPLGGG-LPISATIGRAEIMDSL------PPLAHAFTLSGNPV 308 Query: 307 ACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFV-NIRQMGTIVALDFNVQN 365 A AAALA ++ E++ +++R + L RL +K + + ++R +G ++ +D V+ Sbjct: 309 ASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDL-VK- 366 Query: 366 KGYFFDKNAKLKNFFREKKILIRPL----------GHIMYLMPPYCITATDLDHIYNTIN 415 D+ K + + K++ R G+++ + PP I LD + + Sbjct: 367 -----DRETKERAYEEAAKVVWRAWELGLIVTFFSGNVLRIQPPLTIEKEVLDEGLDILE 421 Query: 416 EAVDFLE 422 EA++ +E Sbjct: 422 EAIEDVE 428 >gnl|CDD|171472 PRK12403, PRK12403, putative aminotransferase; Provisional. Length = 460 Score = 161 bits (410), Expect = 2e-40 Identities = 111/426 (26%), Positives = 204/426 (47%), Gaps = 46/426 (10%) Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQI----IFSEYT 81 +++ EG +L D + + +D +S W G+ + A A+ +Q+ +F T Sbjct: 40 MVRGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAA---AARQMEQLPYYNMFFHTT 96 Query: 82 HEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVME-HG 140 H +L+ LL + P + +++SGS + EV ++ ++ P+ KI++ +G Sbjct: 97 HPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNG 156 Query: 141 YHGDTIGSMSVSMRGAFNNSYEPLLFDVETI--PFPHHNEEQKTLDDLEKHCSTQ----- 193 YHG T+ + ++ F + L+ DV I P+ + N + T + + + Q Sbjct: 157 YHGSTLAATALGGM-KFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKI 215 Query: 194 ------KIAAFLVEPLILGAGGM----QTYRPYILKEFMRITKKYDTLLIADEVMTGWGR 243 +A F+ EP GAGGM ++Y P E RI ++YD LL ADEV+ G+GR Sbjct: 216 LELGAENVAGFVAEPF-QGAGGMIFPPESYWP----EIQRICRQYDVLLCADEVIGGFGR 270 Query: 244 TGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTA 303 TG+ FA H PD L ++KG+T G +P+ + S+ I ++ + ++ F H +Y+ Sbjct: 271 TGEWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALV--EQGGVFAHGLTYSG 328 Query: 304 NPIACAAALANLQIWEKEPVIERIKN-----LERMHADRLSLLKSNKKFVNIRQMGTIVA 358 +P+A A A+ANL+ E V+ R+K+ L+R + + + ++ G + A Sbjct: 329 HPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLRE---VFGDHPLVGEVQGAGLVAA 385 Query: 359 LDF--NVQNKGYFFDKNA---KLKNFFREKKILIRPLGHIMYLMPPYCITATDLDHIYNT 413 L F + + F ++N + + E+ ++IR M + P ++D + + Sbjct: 386 LQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRSTLGRMIMAPALVAGRAEIDELVDK 445 Query: 414 INEAVD 419 AVD Sbjct: 446 TRIAVD 451 >gnl|CDD|178231 PLN02624, PLN02624, ornithine-delta-aminotransferase. Length = 474 Score = 161 bits (410), Expect = 3e-40 Identities = 111/406 (27%), Positives = 192/406 (47%), Gaps = 37/406 (9%) Query: 28 KTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENY---DQIIFSEYTHEP 84 + +GS + D K +D +S++ + GH HP I+ A+ +E + +++ E Sbjct: 63 RAKGSRIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEF 122 Query: 85 AEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGF-FNNNNMPRN--KIVVMEHGY 141 AE L + G V ++G+ +E A+K+A + + +P+N IV + Sbjct: 123 AEYLTSMF------GYDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCF 176 Query: 142 HGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLVE 201 HG T+ ++S+S + PLL + F + E+ +IAAFL E Sbjct: 177 HGRTLAAISMSCDNEATRGFGPLLPGHLKVDF---GDLDALEKIFEED--GDRIAAFLFE 231 Query: 202 PLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILC 261 P I G G+ LK + K++ L+IADE+ TG RTGK+ AC+ ++ PD++ Sbjct: 232 P-IQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDVVI 290 Query: 262 LSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKE 321 L K + GG +P++A L +++ L + H S++ NP+A A A+A LQ+ + E Sbjct: 291 LGKALGGGVIPVSAVLADKDVM---LCIKPGE---HGSTFGGNPLASAVAMAALQVVQDE 344 Query: 322 PVIERIKNLERMHADRLSLLKSNKKFVNI----RQMGTIVALDFNVQNKGYF--FDKNAK 375 + ER L + D+ L K K+F + R G + A+ N G +D K Sbjct: 345 KLAERSAKLGQELRDQ--LQKIQKQFPKLIKEVRGRGLLNAVVLNSPKLGPVSAYDVCLK 402 Query: 376 LKNFFREKKILIRPL-GHIMYLMPPYCITATDLDHIYNTINEAVDF 420 LK E+ +L +P I+ L PP I+ +L +++ ++ Sbjct: 403 LK----ERGLLAKPTHDTIIRLAPPLSISEDELQECSKALSDVLEH 444 >gnl|CDD|180376 PRK06062, PRK06062, hypothetical protein; Provisional. Length = 451 Score = 155 bits (395), Expect = 1e-38 Identities = 102/364 (28%), Positives = 166/364 (45%), Gaps = 60/364 (16%) Query: 30 EGSYLIDENHDKIIDAISSWWVITH-GHRHPIIMNAIRSASENYDQI--IFSEYTHEPAE 86 EGSY+ D + +D SS V T+ GH+HP ++ AI+ E ++ + + ++ Sbjct: 43 EGSYVWDYEGRRYLD-FSSQLVNTNIGHQHPKVVAAIQ---EQAARLCTVAPAHANDARS 98 Query: 87 QLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMA---LGFFNNNNMPRNKIVVMEHGYHG 143 + ARL+ + AP L VFF++ G+ + E A++MA G R K++ YHG Sbjct: 99 EAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLHTG--------RPKVLSAYRSYHG 150 Query: 144 DTIGSMSVSMRGAFNNSYEPLLFDVETI---------PFPHH------NEEQKT---LDD 185 T ++ N + +P + +T PF + EE++ L Sbjct: 151 GTGSAI--------NLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAH 202 Query: 186 LEK---HCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWG 242 LE+ IAA L+E + G G+ P L + ++ +LIADEVM G+G Sbjct: 203 LERVIELEGPSTIAAILLES-VPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFG 261 Query: 243 RTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEI---FDSHLSSDKKKTFFHSS 299 RTGK FA H + PD++ +KG+ G +PL SE I F + Sbjct: 262 RTGKWFAIEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAATFADRP-------YPGGL 314 Query: 300 SYTANPIACAAALANLQIWEKEPVIERIKNL-ERMHADRLSLLKSNKKFV-NIRQMGTIV 357 +Y+ +P+ACAAA+A + E+E ++E + + L L V +R +G Sbjct: 315 TYSGHPLACAAAVATINAMEEEGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFW 374 Query: 358 ALDF 361 AL+ Sbjct: 375 ALEL 378 >gnl|CDD|179636 PRK03715, argD, acetylornithine transaminase protein; Provisional. Length = 395 Score = 153 bits (389), Expect = 7e-38 Identities = 98/338 (28%), Positives = 164/338 (48%), Gaps = 34/338 (10%) Query: 30 EGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSE--YTHEPAEQ 87 +GS+L D N + +D I W V GH +P ++ A+ + +++I + +EP + Sbjct: 26 KGSWLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEAL---AAQAEKLINPSPAFYNEPMAK 82 Query: 88 LARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDTIG 147 LA LL VFF++SG+ + E A+K+A + + +I+ +H +HG T+ Sbjct: 83 LAGLLT--QHSCFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLA 140 Query: 148 SMSVSMRGAFNNSYEPLLFDVETIP-FPHHNEEQKTLDDLE--KHCSTQKIAAFLVEPLI 204 +MS S + ++ + P +P FP + L+D+ + T K A ++EP + Sbjct: 141 TMSASGKPGWDTIFAP------QVPGFP-----KAELNDIASVEKLITDKTVAVMLEP-V 188 Query: 205 LGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLSK 264 G GG+ +++ +TK++ LLI DEV TG GRTG +FA + I PDI+ L K Sbjct: 189 QGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTLGK 248 Query: 265 GITGGALPLAATLCSEEI--FDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEP 322 GI GG +PLAA L E+ F+ + D+ T Y NP+ A +A + Sbjct: 249 GI-GGGVPLAALLAKAEVAVFE---AGDQGGT------YNGNPLMTAVGVAVISQLLAPG 298 Query: 323 VIERIKNLERMHADRLSLLKSNKKFVNIRQMGTIVALD 360 +E ++ ++L L + R G + AL Sbjct: 299 FLEGVRARGEYLKEKLLELSEERGLEGERGEGLLRALL 336 >gnl|CDD|181493 PRK08593, PRK08593, 4-aminobutyrate aminotransferase; Provisional. Length = 445 Score = 153 bits (389), Expect = 8e-38 Identities = 115/416 (27%), Positives = 193/416 (46%), Gaps = 41/416 (9%) Query: 31 GSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAEQLAR 90 G+ L D + ID ++S GH P ++ AI++ ++ + + HEP +LA+ Sbjct: 33 GATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAK 92 Query: 91 LLIKIAPLGLQ-YVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDTIGSM 149 L ++AP + V F SGS + + +K A + R I+ + YHG T GS+ Sbjct: 93 KLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTG-----RPYIISFTNAYHGSTYGSL 147 Query: 150 SVS-----MRGAFNNSYEPLLFDVETIPFPHHNE------EQKTLDDL--------EKHC 190 S+S MR Y PLL IPFP + +++ EK+ Sbjct: 148 SMSGISLNMR----RKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYL 203 Query: 191 STQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFAC 250 ++A ++E I G GG+ P + + +++ L D++ G GRTGK + Sbjct: 204 PADEVACIVIET-IQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSI 262 Query: 251 NHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAA 310 +H +ITPD++ K + GG +P++A + +EI +S L + H + ANP++CAA Sbjct: 263 SHFNITPDLMSFGKSLAGG-MPMSAIVGRKEIMES-LEAPA-----HLFTTGANPVSCAA 315 Query: 311 ALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFV-NIRQMGTIVALDF--NVQNKG 367 ALA + + E E +++R R S FV ++R G + +D + + K Sbjct: 316 ALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKT 375 Query: 368 YFFDKNAKLKNF-FREKKILIRPLGHIMYLMPPYCITATDLDHIYNTINEAVDFLE 422 + K+ N+ F ++I G+++ PP IT LD NTI +A LE Sbjct: 376 RDNEAALKICNYCFEHGVVIIAVAGNVLRFQPPLVITYEQLDTALNTIEQAFTALE 431 >gnl|CDD|179505 PRK02936, argD, acetylornithine aminotransferase; Provisional. Length = 377 Score = 153 bits (388), Expect = 1e-37 Identities = 122/436 (27%), Positives = 204/436 (46%), Gaps = 76/436 (17%) Query: 1 MNHLHSNYPIWHPFVQHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPI 60 M+HL Y + P I+K +G+ + D N +D S V GH HP Sbjct: 1 MSHLFPTYGRF-PI----------DIVKGKGTKVTDNNGKTYLDFTSGIAVCNLGHCHPT 49 Query: 61 IMNAIRSASENYDQI--IFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALK 118 + A++ E D I + + +T+ E++A LL + + VFF +SG+ + E ALK Sbjct: 50 VTKAVQ---EQLDDIWHVSNLFTNSLQEEVASLLAENSAG--DLVFFCNSGAEANEAALK 104 Query: 119 MALGFFNNNNMPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNE 178 +A + ++KIV E +HG T G+MS + + + PLL +PF N+ Sbjct: 105 LA-----RKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPF---ND 156 Query: 179 EQKTLDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVM 238 K L ++ +++AA ++E + G GG+ P L+E + KK+ LLI DEV Sbjct: 157 I-KALKEVM----NEEVAAVMLEV-VQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQ 210 Query: 239 TGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFF-- 296 TG GRTG +FA + PDI+ ++KG+ G +P+ A + +E+ + F Sbjct: 211 TGIGRTGTLFAYEQFGLDPDIVTVAKGL-GNGIPVGAMIGKKELGTA----------FGP 259 Query: 297 --HSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADR-LSLLK---SNKKFV-N 349 H S++ NP+A AAA LQ+ ++ +E ++ + L L+ + + V N Sbjct: 260 GSHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQE----KGEYFLQKLQEELEHLECVKN 315 Query: 350 IRQMGTIVA--LDFNVQNKGYFFDKNAKLKNFFREKKILIRPLGH-IMYLMPPYCITATD 406 IR G ++ V A + RE+ +L+ G ++ L+PP +T + Sbjct: 316 IRGKGLMIGIECTEEV----------APVIEQLREEGLLVLSAGPNVIRLLPPLVVTKEE 365 Query: 407 LDHIYNTINEAVDFLE 422 LD +AV L+ Sbjct: 366 LD-------QAVYLLK 374 >gnl|CDD|179736 PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional. Length = 396 Score = 152 bits (387), Expect = 1e-37 Identities = 114/392 (29%), Positives = 192/392 (48%), Gaps = 41/392 (10%) Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIF-SEYTHEP 84 I + EG ++ D ++ +D +S++ + GHRHP I+ A++ + D++ S H Sbjct: 26 ISEAEGVWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALK---DQADKVTLTSRAFHS- 81 Query: 85 AEQLARLLIKIAPL-GLQYVFFSDSGSTSIEVALKMALGF-FNNNNMPRNK--IVVMEHG 140 +QL K+A L G V ++G+ ++E A+K A + ++ + NK I+ E Sbjct: 82 -DQLGPWYEKVAKLTGKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGN 140 Query: 141 YHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLE--KHCSTQKIAAF 198 +HG T+ ++S+S + + P+L ++ IP+ DLE K T AAF Sbjct: 141 FHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY----------GDLEALKAAITPNTAAF 190 Query: 199 LVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPD 258 LVEP I G G+ LK + K+ + L IADE+ TG GRTGK+FAC+ ++TPD Sbjct: 191 LVEP-IQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPD 249 Query: 259 ILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIW 318 + L K + GG P++ + +I H S++ NP+ACA ++A L++ Sbjct: 250 MYILGKALGGGVFPISCVAANRDILGVFTPGS------HGSTFGGNPLACAVSIAALEVL 303 Query: 319 EKEPVIERIKNLERMHADRLSLLKSNKKFVNIRQMGTIVALDFNVQNKGYFFDKNAKLKN 378 E+E + ER L ++L + N +R G + ++ N + Y LK Sbjct: 304 EEEKLPERSLELGEYFKEQLKEID-NPMIKEVRGRGLFIGVELNEPARPYC----EALK- 357 Query: 379 FFREKKILIRPLGH--IMYLMPPYCITATDLD 408 E+ +L + H ++ PP IT +LD Sbjct: 358 ---EEGLLCKET-HETVIRFAPPLVITKEELD 385 >gnl|CDD|181002 PRK07495, PRK07495, 4-aminobutyrate aminotransferase; Provisional. Length = 425 Score = 149 bits (379), Expect = 9e-37 Identities = 115/413 (27%), Positives = 194/413 (46%), Gaps = 42/413 (10%) Query: 28 KTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAEQ 87 + E + + D+ + ID + V+ GHRHP ++ A+++ + + +E + Sbjct: 28 RAENAEIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQVVPYENYVR 87 Query: 88 LARLLIKIAPLGL-QYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDTI 146 LA L + P + F +G+ ++E A+K+A R+ ++ G+HG T Sbjct: 88 LAERLNALVPGDFAKKTIFVTTGAEAVENAVKIA-----RAATGRSAVIAFGGGFHGRTF 142 Query: 147 GSMSVSMRGA-FNNSYEPLLFDVETIPFP---HHNEEQKTLDDLEKHCST----QKIAAF 198 MS++ + + + ++ DV +PFP H +++L L+K Q++AA Sbjct: 143 MGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAI 202 Query: 199 LVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPD 258 ++EP + G GG +K + ++ LLIADEV TG+ RTGK+FA H ++ D Sbjct: 203 IIEP-VQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAAD 261 Query: 259 ILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIW 318 + ++KG+ GG PLAA EI D+ T Y NP+ AAA A L + Sbjct: 262 LTTMAKGLAGG-FPLAAVTGRAEIMDAPGPGGLGGT------YGGNPLGIAAAHAVLDVI 314 Query: 319 EKEPVIERIKNLERMHADRLSLLKSN-KKFVNIRQMGTIVALDFNVQNKGYFFDKNAKLK 377 E+E + ER L RL+ L+ + +IR G + A++FN + G +A+ Sbjct: 315 EEEDLCERANQLGNRLKQRLASLRETVPEIADIRGPGFMNAVEFNDADSG---LPSAEFA 371 Query: 378 NFFREKKILIRPL--------GHIMYLMPPYCITATDLDHIYNTINEAVDFLE 422 N R K L + L G+++ + P IT D + EA+D LE Sbjct: 372 NRVRLKA-LEKGLILLTCGVHGNVIRFLAP--ITIQD-----DVFAEALDILE 416 >gnl|CDD|132290 TIGR03246, arg_catab_astC, succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason. Length = 397 Score = 147 bits (372), Expect = 7e-36 Identities = 101/345 (29%), Positives = 169/345 (48%), Gaps = 25/345 (7%) Query: 27 IKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQI--IFSEYTHEP 84 ++ EGS + D+ + ID V GH HP ++ A+ E D++ I + YT+EP Sbjct: 22 VRGEGSRVWDQQGKEYIDFAGGIAVNALGHAHPELVKAL---IEQADKLWHIGNGYTNEP 78 Query: 85 AEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGF-FNNNNMPRNKIVVMEHGYHG 143 +LA+ L+ VFF +SG+ + E ALK+A + + + +++IV ++ +HG Sbjct: 79 VLRLAKKLVDAT--FADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHG 136 Query: 144 DTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLVEPL 203 T+ ++SV + ++ + PL ++ P+ + + D K A +VEP Sbjct: 137 RTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALISD--------KTCAVIVEP- 187 Query: 204 ILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLS 263 I G GG+ P LK + +++ LLI DEV TG GRTG+++A H +TPDIL + Sbjct: 188 IQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILTSA 247 Query: 264 KGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPV 323 K + GG P+ A L + EI +HL H ++Y NP+ACA A L + + Sbjct: 248 KAL-GGGFPIGAMLTTTEI-AAHLKVGT-----HGTTYGGNPLACAVAGKVLDLVNTPEL 300 Query: 324 IERIKNLERMHADRLSLLKSNKK-FVNIRQMGTIVALDFNVQNKG 367 + +K + D L + + F IR G ++ +G Sbjct: 301 LAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAYQG 345 >gnl|CDD|101376 PRK04013, argD, acetylornithine/acetyl-lysine aminotransferase; Provisional. Length = 364 Score = 146 bits (370), Expect = 9e-36 Identities = 104/396 (26%), Positives = 188/396 (47%), Gaps = 56/396 (14%) Query: 25 KIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFS--EYTH 82 ++++ EG Y+ D + +D I+ V GH HP + SE ++++ + + H Sbjct: 9 RLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGHNHP---EWVEEMSEQLEKLVVAGPMFEH 65 Query: 83 EPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYH 142 E E++ L K + +YV+ +SG+ ++E ALK A + R +I+ M + +H Sbjct: 66 EEKEEMLEELSKW--VNYEYVYMGNSGTEAVEAALKFARLYTG-----RKEIIAMTNAFH 118 Query: 143 GDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLE--KHCSTQKIAAFLV 200 G T+G++S + + + +EPL+ + IPF +D+E K T++ AA + Sbjct: 119 GRTMGALSATWKPKYREDFEPLVPGFKHIPF----------NDVEAAKEAITKETAAVIF 168 Query: 201 EPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDIL 260 EP I G GG+ + +K +T+ LLIADEV +G RTGK A H + PDI+ Sbjct: 169 EP-IQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPDIV 226 Query: 261 CLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEK 320 + KGI G +P++ TL + ++ ++ K H S++ NP+AC A L+I + Sbjct: 227 TMGKGI-GNGVPVSLTLTNFDV-------ERGK---HGSTFGGNPLACKAVAVTLRILRR 275 Query: 321 EPVIERIKN-LERMHADRLSLLKSNKKFVNIRQMGTIVALDFNVQNKGYFFDKNAKLKNF 379 E ++E+ + +R+ + + I + +QN+GY Sbjct: 276 ERLVEKAGEKFIEIKGERVVTTRGRGLMIGIVLKKPVGKYVEELQNRGY----------- 324 Query: 380 FREKKILIRPLGH-IMYLMPPYCITATDLDHIYNTI 414 L+ G ++ L+PP I+ ++ + I Sbjct: 325 ------LVHTAGQRVIRLLPPLIISKDTMEEAKSAI 354 >gnl|CDD|179933 PRK05093, argD, bifunctional N-succinyldiaminopimelate- aminotransferase/acetylornithine transaminase protein; Reviewed. Length = 403 Score = 145 bits (367), Expect = 3e-35 Identities = 112/348 (32%), Positives = 175/348 (50%), Gaps = 31/348 (8%) Query: 27 IKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSE-YTHEPA 85 ++ EGS + D+ + ID V GH HP ++ A++ E I S +T+EPA Sbjct: 27 VRGEGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHI--SNVFTNEPA 84 Query: 86 EQLARLLIK--IAPLGLQYVFFSDSGSTSIEVALKMALGF-FNNNNMPRNKIVVMEHGYH 142 +LA+ LI A + VFF++SG+ + E A K+A + + + + +I+ + +H Sbjct: 85 LRLAKKLIDATFA----ERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFH 140 Query: 143 GDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLVEP 202 G T+ ++SV + +++ + P D+ +PF N+ L ++ A +VEP Sbjct: 141 GRTLFTVSVGGQPKYSDGFGPKPADITHVPF---ND----LAAVKAVID-DHTCAVVVEP 192 Query: 203 LILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCL 262 I G GG+ P L+ + +++ LLI DEV TG GRTG +FA H +TPDIL Sbjct: 193 -IQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDILTS 251 Query: 263 SKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEP 322 +K + GG P+ A L + EI SH K H S+Y NP+ACA A A I Sbjct: 252 AKAL-GGGFPIGAMLTTAEI-ASHF-----KVGTHGSTYGGNPLACAVAEAVFDIINTPE 304 Query: 323 VIERIKNLERMHADRLSLLKSNKK---FVNIRQMGTIVALDFNVQNKG 367 V+E +K + D L + N+K F IR MG ++ + Q KG Sbjct: 305 VLEGVKARRQRFVDGLQKI--NQKYGVFSEIRGMGLLIGAELKPQYKG 350 >gnl|CDD|180748 PRK06918, PRK06918, 4-aminobutyrate aminotransferase; Reviewed. Length = 451 Score = 142 bits (360), Expect = 1e-34 Identities = 109/420 (25%), Positives = 196/420 (46%), Gaps = 37/420 (8%) Query: 20 NPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSE 79 PTF + G+ + D + ++ ID + I GH HP + A+ + Y F+ Sbjct: 36 IPTFAQ--SANGALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFNV 93 Query: 80 YTHEPAEQLARLLIKIAPLGL-QYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVME 138 +EP +LA L +AP + V F +SG+ ++E A+K+A + R I+ Sbjct: 94 MMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKY-----TKRQGIISFS 148 Query: 139 HGYHGDTIGSMSVSMR-GAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKH-------- 189 G+HG T+ +M+++ + + + P +V PFP+ + L + + Sbjct: 149 RGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFK 208 Query: 190 ------CSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGR 243 + + IAA ++EP + G GG ++E I ++ L +ADE+ TG+ R Sbjct: 209 NFFISEVAPETIAAVVMEP-VQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFAR 267 Query: 244 TGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTA 303 TGK FA H D+ PD++ +SK + G +P++ + +EI D + T Y Sbjct: 268 TGKYFAIEHFDVVPDLITVSKSLGAG-VPISGVIGRKEIMDESAPGELGGT------YAG 320 Query: 304 NPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFV-NIRQMGTIVALDFN 362 +P+ CAAALA L I EKE + +R L ++ +R +K+ + ++R +G + A + Sbjct: 321 SPLGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELV 380 Query: 363 VQNKGYFFDK--NAKLKNFFREKKILIRPL---GHIMYLMPPYCITATDLDHIYNTINEA 417 K DK A + ++ +L+ G+++ ++ P IT L+ I E+ Sbjct: 381 QDRKTKEPDKTLTANICKEANKRGLLLLSAGTYGNVIRVLMPLVITDEQLEEGLTIIEES 440 >gnl|CDD|180372 PRK06058, PRK06058, 4-aminobutyrate aminotransferase; Provisional. Length = 443 Score = 142 bits (361), Expect = 1e-34 Identities = 101/353 (28%), Positives = 171/353 (48%), Gaps = 42/353 (11%) Query: 31 GSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEP----AE 86 G + D + +++ID S V + G+ P ++ A+R + F +E AE Sbjct: 47 GGIVEDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTCFMVTPYEGYVAVAE 106 Query: 87 QLARLLIKIAPLG---LQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHG 143 QL RL P G + F+ SG+ ++E A+K+A + R +VV +H YHG Sbjct: 107 QLNRL----TP-GDHEKRSALFN-SGAEAVENAVKIA-----RSYTGRQAVVVFDHAYHG 155 Query: 144 DTIGSMSVSMRGA-FNNSYEPLLFDVETIP--FPHHNEE----------QKTLDDLEKHC 190 T +M+++ + + + + P +V P +P+ + + + + +EK Sbjct: 156 RTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQV 215 Query: 191 STQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFAC 250 +AA ++EP I G GG L + ++ + IADEV TG+ RTG FAC Sbjct: 216 GADNLAAVIIEP-IQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFAC 274 Query: 251 NHADITPDILCLSKGITGGALPLAATLCSEEIFDS-HLSSDKKKTFFHSSSYTANPIACA 309 H I PD++ +KGI GG LPL+A EI D+ H +Y NP+ACA Sbjct: 275 EHEGIVPDLITTAKGIAGG-LPLSAVTGRAEIMDAPHPGG-------LGGTYGGNPVACA 326 Query: 310 AALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFV-NIRQMGTIVALDF 361 AALA ++ E++ ++ R + +E + DRL L + + ++R G ++A++ Sbjct: 327 AALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIEL 379 >gnl|CDD|180330 PRK05965, PRK05965, hypothetical protein; Provisional. Length = 459 Score = 137 bits (346), Expect = 6e-33 Identities = 103/407 (25%), Positives = 190/407 (46%), Gaps = 31/407 (7%) Query: 31 GSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSE-YTH---EPAE 86 G+ L D + +++DA + W + G+ I + +A+E ++ ++ Y H EPA Sbjct: 37 GATLTDASGHQLLDAFAGLWCVNVGYGQESI---VEAAAEQMRELPYATGYFHFGSEPAI 93 Query: 87 QLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMP-RNKIVVMEHGYHGDT 145 +LA L + AP L +V+F+ GS +++ A++ ++N P + + + +E GYHG + Sbjct: 94 RLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSS 153 Query: 146 IGSMSVSMRGAFNNSYEPLLFDVETIP--FPHHNEEQKT-----------LDDLEKHCST 192 ++ AF+ ++ L IP +P+ N L Sbjct: 154 SVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGA 213 Query: 193 QKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNH 252 +AAF EP I G+GG+ LK ++ L +ADEV+TG+GRTG +FAC Sbjct: 214 DNVAAFFCEP-IQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEA 272 Query: 253 ADITPDILCLSKGITGGALPLAATLCSEEIFDSHL-SSDKKKTFFHSSSYTANPIACAAA 311 + PD++ ++KG+T G +P+ A L S+ ++ + H +Y+A+P++ A Sbjct: 273 EGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVG 332 Query: 312 LANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFVNIRQMGTIVALDFNVQNKG--YF 369 L L+++ + ++ + A L L+++ ++R G + AL+ V +K Sbjct: 333 LEVLRLYHEGGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALEL-VADKATKTP 391 Query: 370 FDKNAKL--KNFFR--EKKILIRPLG-HIMYLMPPYCITATDLDHIY 411 FD + F R ++ R G ++ P C T + D I+ Sbjct: 392 FDAALDPADRIFDRAYANGLVFRAFGDGVLGFAPALCCTEGEFDLIF 438 >gnl|CDD|180690 PRK06777, PRK06777, 4-aminobutyrate aminotransferase; Provisional. Length = 421 Score = 134 bits (340), Expect = 3e-32 Identities = 95/346 (27%), Positives = 170/346 (49%), Gaps = 25/346 (7%) Query: 28 KTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAEQ 87 + E + L D + ID + V+ GHRHP ++ A+R + + + + Sbjct: 28 RAENATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVPYASYVT 87 Query: 88 LARLLIKIAPLG--LQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDT 145 LA + +AP+ + FF+ +G+ ++E A+K+A + R ++ +HG T Sbjct: 88 LAERINALAPIDGPAKTAFFT-TGAEAVENAVKIARAY-----TGRPGVIAFGGAFHGRT 141 Query: 146 IGSMSVSMRGA-FNNSYEPLLFDVETIPFP---HHNEEQKTLDDLEK--HC--STQKIAA 197 + +M+++ + A + + P + +P H ++ L +E+ + ++AA Sbjct: 142 LLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAA 201 Query: 198 FLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITP 257 L+EP I G GG P + + ++ LLIADEV TG+ RTGK+FA + D+ P Sbjct: 202 ILLEP-IQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKP 260 Query: 258 DILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQI 317 D++ ++K + GG +P++A + E+ D+ T Y NP+A AAALA L + Sbjct: 261 DLITMAKSLGGG-MPISAVVGRAEVMDAPAPGGLGGT------YAGNPLAVAAALAVLDV 313 Query: 318 WEKEPVIERIKNLERMHADRLSLLK-SNKKFVNIRQMGTIVALDFN 362 +E + +R L + L K S V+IR G++VA++FN Sbjct: 314 IAEEKLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFN 359 >gnl|CDD|129792 TIGR00709, dat, 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase. Length = 442 Score = 132 bits (334), Expect = 1e-31 Identities = 93/389 (23%), Positives = 167/389 (42%), Gaps = 50/389 (12%) Query: 2 NHLHSN---YPIWHPFVQHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRH 58 N + SN YP P K +G ++ D + +D ++ + GH H Sbjct: 8 NEMESNVRSYPRKLPTAFA----------KAQGCWVTDVEGKEYLDFLAGAGTLALGHNH 57 Query: 59 PIIMNAIRSASENYDQIIFSEYTHEPAEQLARLLIKIAPLG-LQYV--FFSDSGSTSIEV 115 P + I ++ + + T + L+ I P + Y F SG+ ++E Sbjct: 58 PNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEA 117 Query: 116 ALKMALGFFNNNNMPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPH 175 A+K+A + R ++ G+HG TIG+++V+ N+ L+ V+ +P+PH Sbjct: 118 AIKLAKTYTG-----RTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPH 172 Query: 176 HNEE-----------------QKTLDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYIL 218 + ++D+E K AA ++E I G GG+ L Sbjct: 173 EYRCPFGIGGEAGSNASIEYFENFIEDVES--GVDKPAAVILEA-IQGEGGVVAAPSEWL 229 Query: 219 KEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLC 278 ++ +T+K+D LI DEV G+GR+G +FA HA I PD + +SK + GG LPLA L Sbjct: 230 QKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVVMSKAV-GGGLPLAVLLI 288 Query: 279 SEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNL-ERMHADR 337 + E D + H+ ++ N +A L W+ + + + + ER+ + Sbjct: 289 APEF-------DAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDNLAQNAQERGERITSFL 341 Query: 338 LSLLKSNKKFVNIRQMGTIVALDFNVQNK 366 ++K + N+R G + + + + Sbjct: 342 DDMIKEHPCIGNVRGRGLMQGIMIVDERQ 370 >gnl|CDD|183486 PRK12381, PRK12381, bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional. Length = 406 Score = 132 bits (333), Expect = 2e-31 Identities = 93/335 (27%), Positives = 160/335 (47%), Gaps = 31/335 (9%) Query: 27 IKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAE 86 ++ EGS L D+ + ID V GH HP + A+ + + + YT+EP Sbjct: 26 VRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHT-GNGYTNEPVL 84 Query: 87 QLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMA----LGFFNNNNMPRNKIVVMEHGYH 142 +LA+ LI A VFF +SG+ + E ALK+A + ++ ++ IV ++ +H Sbjct: 85 RLAKKLID-ATFA-DRVFFCNSGAEANEAALKLARKYAHDRYGSH---KSGIVAFKNAFH 139 Query: 143 GDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLE--KHCSTQKIAAFLV 200 G T+ ++S + ++ + PL D+ + +DL + A +V Sbjct: 140 GRTLFTVSAGGQPKYSQDFAPLPPDIRHAAY----------NDLNSASALIDDQTCAVIV 189 Query: 201 EPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDIL 260 EP I G GG+ L+ + +++ LLI DEV TG GRTG+++A H +TPD+L Sbjct: 190 EP-IQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVL 248 Query: 261 CLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEK 320 +K + GG P+ A L +E+ S ++ H ++Y NP+A A A L++ Sbjct: 249 TTAKAL-GGGFPIGAMLTTEK-CASVMTVGT-----HGTTYGGNPLASAVAGKVLELINT 301 Query: 321 EPVIERIKNLERMHADRLSLLKSNKK-FVNIRQMG 354 ++ +K +RL+ + + F IR +G Sbjct: 302 PEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLG 336 >gnl|CDD|182078 PRK09792, PRK09792, 4-aminobutyrate transaminase; Provisional. Length = 421 Score = 132 bits (333), Expect = 2e-31 Identities = 93/344 (27%), Positives = 171/344 (49%), Gaps = 25/344 (7%) Query: 30 EGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAEQLA 89 E + L D ++ ID + V+ GHRHP ++ A+ + + + +E LA Sbjct: 30 ENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLA 89 Query: 90 RLLIKIAPLG--LQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDTIG 147 + +AP+ + FF+ +G+ ++E A+K+A + R ++ G+HG T Sbjct: 90 EKINALAPVSGQAKTAFFT-TGAEAVENAVKIA-----RAHTGRPGVIAFSGGFHGRTYM 143 Query: 148 SMSVSMRGA-FNNSYEPLLFDVETIPFP---HHNEEQKTLDDLEK----HCSTQKIAAFL 199 +M+++ + A + + P V +P+P H Q +LD +E+ +++AA + Sbjct: 144 TMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAII 203 Query: 200 VEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDI 259 EP + G GG ++ R+ ++ ++IADEV +G+ RTGK+FA +H PD+ Sbjct: 204 FEP-VQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDL 262 Query: 260 LCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWE 319 + ++K + GG +PL+ + + I D+ T Y NP+A AAA A L I + Sbjct: 263 MTMAKSLAGG-MPLSGVVGNANIMDAPAPGGLGGT------YAGNPLAVAAAHAVLNIID 315 Query: 320 KEPVIERIKNL-ERMHADRLSLLKSNKKFVNIRQMGTIVALDFN 362 KE + ER L +R+ + +S +R +G+++A +FN Sbjct: 316 KESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFN 359 >gnl|CDD|162844 TIGR02407, ectoine_ectB, diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance. Length = 412 Score = 129 bits (326), Expect = 1e-30 Identities = 108/408 (26%), Positives = 179/408 (43%), Gaps = 37/408 (9%) Query: 28 KTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFS--EYTHEPA 85 K +GS L DE+ + ID + + +GH +P + A+ + D II S T Sbjct: 23 KAKGSTLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLAD-DGIIHSLDMATEAKR 81 Query: 86 EQLARLLIKI-APLGLQY--VFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYH 142 E L I P GL Y F +G+ ++E ALK+A R+ +V + +H Sbjct: 82 EFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLA-----RKVTGRSNVVSFTNAFH 136 Query: 143 GDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHH-NEEQKTLDDLEKHCSTQ-----KIA 196 G T+GS+SV+ L +V +P+ + + T+ EK A Sbjct: 137 GMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPA 196 Query: 197 AFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADIT 256 A ++E + G GG+ L+ ++ +++D LLI D++ G GRTG F+ A I Sbjct: 197 AVILET-VQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIE 255 Query: 257 PDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQ 316 PDI+CLSK I+G LPLA TL E+ D K H+ ++ N +A A A L+ Sbjct: 256 PDIVCLSKSISGYGLPLALTLIKPEL-------DVWKPGEHNGTFRGNNLAFVTATAALE 308 Query: 317 I-WEKEPVIERIKNLERMHADRLSLL--KSNKKFVNIRQMGTIVALDFNVQNKGYFFDKN 373 W + + ++ + +RL + + + +R G + ++ + K Sbjct: 309 YYWSDDAFEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECGDGDLAGKIAKA 368 Query: 374 AKLKNFFREKKILIRPLGH---IMYLMPPYCITATDLDHIYNTINEAV 418 A F E ++I G ++ L+PP I L + + +AV Sbjct: 369 A----F--ENGLIIETSGPNDEVIKLLPPLTIDEETLQQGLDILEQAV 410 >gnl|CDD|162007 TIGR00713, hemL, glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases. Length = 423 Score = 126 bits (319), Expect = 1e-29 Identities = 96/349 (27%), Positives = 171/349 (48%), Gaps = 34/349 (9%) Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEY--THE 83 + + +G+YL D + ++ ID + SW + GH HP ++ A++ A E + Y E Sbjct: 34 VARGKGAYLYDVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERG-----TSYGAPTE 88 Query: 84 PAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHG 143 LA+ +I P ++ V F +SG+ + A+++A G+ R+KI+ E YHG Sbjct: 89 AEILLAKEIISRVPS-VEMVRFVNSGTEATMSAVRLARGYTG-----RDKIIKFEGCYHG 142 Query: 144 --DT----IGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEE--QKTLDDLEKHCSTQKI 195 D GS + G + P F T+ P+++ E ++ ++ ++I Sbjct: 143 HHDALLVKAGS-GAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYG-----EEI 196 Query: 196 AAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADI 255 A +VEP + G G+ +P L +T++Y +LLI DEVMTG+ R A + + Sbjct: 197 AGVIVEP-VAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGF-RVALGGAQEYFGV 254 Query: 256 TPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANL 315 PD+ L K I GG LP+ A EI + L+ + + + + + NP+A AA LA L Sbjct: 255 EPDLTTLGK-IIGGGLPVGAFGGRREIME-RLAPEGP--VYQAGTLSGNPLAMAAGLATL 310 Query: 316 QIWEKEPVIERIKNLERMHADRLSLLKSNKKF-VNIRQMGTIVALDFNV 363 ++ ++E V + L + A+ LS + + + ++G++ +L F Sbjct: 311 KLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTE 359 >gnl|CDD|180764 PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate aminotransferase; Provisional. Length = 464 Score = 122 bits (307), Expect = 2e-28 Identities = 88/330 (26%), Positives = 147/330 (44%), Gaps = 57/330 (17%) Query: 28 KTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEY------- 80 + G Y+ D + ID ++ + GH HP+++ AI+ Q++ E Sbjct: 51 RARGIYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQ-------QVLADELPLHTLDL 103 Query: 81 THEPAEQLARLLIKIAPLGL----QYVFFSDSGSTSIEVALKM---ALGFFNNNNMPRNK 133 T +Q + L P + F +G+ ++E ALK+ A G R+ Sbjct: 104 TTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATG--------RST 155 Query: 134 IVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHH---------NEEQKT-- 182 ++ + GYHG + G++S+ LL V+ +P+P+ + Sbjct: 156 VLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANL 215 Query: 183 ------LDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADE 236 LDD E AA ++E ++ G GG+ L+ RIT++ LI DE Sbjct: 216 HYLENLLDDPES--GVVLPAAVILE-VVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDE 272 Query: 237 VMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFF 296 + +G+GRTGK+FA HA I PD++ LSK I GG+LPLA + E + D + Sbjct: 273 IQSGFGRTGKMFAFEHAGIIPDVVVLSKAI-GGSLPLAVVVYREWL-------DTWQPGA 324 Query: 297 HSSSYTANPIACAAALANLQIWEKEPVIER 326 H+ ++ N +A AA A L+ ++ + E Sbjct: 325 HAGTFRGNQMAMAAGSATLRYIKEHRLAEH 354 >gnl|CDD|181737 PRK09264, PRK09264, diaminobutyrate--2-oxoglutarate aminotransferase; Validated. Length = 425 Score = 121 bits (305), Expect = 5e-28 Identities = 114/419 (27%), Positives = 183/419 (43%), Gaps = 57/419 (13%) Query: 28 KTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPA-- 85 K +GS+L DE+ + ID + + +GH +P++ A+ + D I H A Sbjct: 27 KAKGSWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQR-DGITHGLDMHTTAKR 85 Query: 86 ---EQLARLLIKIAPLGLQYV--FFSDSGSTSIEVALKMA---LGFFNNNNMPRNKIVVM 137 E ++K P GL Y F +G+ ++E ALK+A G R IV Sbjct: 86 EFLETFEETILK--PRGLDYKVQFTGPTGTNAVEAALKLARKVTG--------RTNIVAF 135 Query: 138 EHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFP-HHNEEQKTLDDLEK-----HCS 191 +G+HG T+GS++V+ L +V +P+ + + TL LEK Sbjct: 136 TNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSG 195 Query: 192 TQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACN 251 AA +VE + G GG+ L+ ++ +K+D LLI D++ G GRTG F+ Sbjct: 196 VDLPAAVIVET-VQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFE 254 Query: 252 HADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAA 311 A ITPDI+ LSK I+G LP+A L E+ D K H+ ++ N +A A Sbjct: 255 RAGITPDIVTLSKSISGYGLPMALVLIKPEL-------DVWKPGEHNGTFRGNNLAFVTA 307 Query: 312 LANLQ-IWEKEPVIERIKNLERMHADRLS--LLKSNKKFVNIRQMGTIVALDFNVQNKGY 368 A L+ W + + +K + +RL K +R G + +DF Sbjct: 308 TAALEEYWSDDAFEKEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDF------- 360 Query: 369 FFDKNAKL-----KNFFREKKILIR---PLGHIMYLMPPYCITATDLDHIYNTINEAVD 419 + +L F E ++I P ++ L+PP I +L+ + + EAV Sbjct: 361 ---GDGELAGKIAAEAF-ENGLIIETSGPEDEVVKLLPPLTIDEEELEEGLDILEEAVA 415 >gnl|CDD|179868 PRK04612, argD, acetylornithine transaminase protein; Provisional. Length = 408 Score = 120 bits (302), Expect = 7e-28 Identities = 81/318 (25%), Positives = 148/318 (46%), Gaps = 35/318 (11%) Query: 15 VQHFCNPTFKK----IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASE 70 + H+ P ++ + + +GS + D+ + +D + V GH P ++ A+ + Sbjct: 11 LAHYYLPVYRPRQVVLERGQGSRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAG 70 Query: 71 ---NYDQIIFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNN 127 + + +S P +LA L+ + + VF +SG+ + E A+K+ + ++ Sbjct: 71 KLWHTSNVFYSA----PPLKLAEELVTASRFA-EKVFLCNSGTEANEAAIKLVRKWASSQ 125 Query: 128 NMPRNK--IVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDD 185 P +K IV +HG T+ +++ + + + YEPL + F E Sbjct: 126 GRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFND--VEA----- 178 Query: 186 LEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTG 245 LE + +AA ++EP I G GG+ P L + ++D LL+ DE+ G GRTG Sbjct: 179 LEAAMAGGDVAAVMLEP-IQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTG 237 Query: 246 KIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANP 305 +FA +TPDI+ L+K + GG P+ A L ++ ++ + H +++ NP Sbjct: 238 TLFAHWQEQVTPDIVTLAKAL-GGGFPIGAMLAGPKV------AETMQFGAHGTTFGGNP 290 Query: 306 IACAAA------LANLQI 317 +A A A LA+ QI Sbjct: 291 LAAAVARVALRKLASPQI 308 >gnl|CDD|167080 PRK00854, rocD, ornithine--oxo-acid transaminase; Reviewed. Length = 401 Score = 118 bits (297), Expect = 3e-27 Identities = 99/390 (25%), Positives = 170/390 (43%), Gaps = 34/390 (8%) Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPA 85 + + EG ++ D + ++ +D +S++ + GH HP I+ A+ + + S Sbjct: 27 LTRGEGVWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRL--TLTSRAFRN-- 82 Query: 86 EQLARLLIKIAPL-GLQYVFFSDSGSTSIEVALKMALGF-FNNNNMPRNK--IVVMEHGY 141 +QLA L ++A L G V +SG+ ++E A+K + + +P + I+V + Sbjct: 83 DQLAPLYEELAALTGSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNF 142 Query: 142 HGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLVE 201 HG T+ + S + P +PF + + T AFLVE Sbjct: 143 HGRTLSIVGFSTDPDARGGFGPFTPGFRVVPFGDAEALEAAI--------TPNTVAFLVE 194 Query: 202 PLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILC 261 P I G G+ + + LI DE+ TG GRTGK+ A H I D+ Sbjct: 195 P-IQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTL 253 Query: 262 LSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKE 321 + K ++GG P++A L + E+ H S++ NP+ACA A A L++ +E Sbjct: 254 IGKALSGGFYPVSAVLSNSEVLGVLKPGQ------HGSTFGGNPLACAVARAALKVLTEE 307 Query: 322 PVIERIKNLERMHADRLSLLKS--NKKFVNIRQMGTIVALDFNVQNKGYFFDKNAKLKNF 379 +IE N M A L L+S + +R G ++A++ + G + Sbjct: 308 GMIE---NAAEMGAYFLEGLRSIRSNIVREVRGRGLMLAVELEPEAGG-----ARQYCEA 359 Query: 380 FREKKILIRPL-GHIMYLMPPYCITATDLD 408 +E+ +L + H + L PP IT +D Sbjct: 360 LKERGLLAKDTHDHTIRLAPPLVITREQVD 389 >gnl|CDD|181227 PRK08088, PRK08088, 4-aminobutyrate aminotransferase; Validated. Length = 425 Score = 116 bits (292), Expect = 1e-26 Identities = 85/329 (25%), Positives = 153/329 (46%), Gaps = 41/329 (12%) Query: 51 VITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAEQLARLLIKIAP--LGLQYVFFSDS 108 V+ GH HP ++ A+ + + F +EP +L + + P + + + + Sbjct: 52 VLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEKMNQKVPGDFAKKTLLVT-T 110 Query: 109 GSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDTIGSMSVSMRGAFN---------- 158 GS ++E A+K+A R+ ++ YHG T ++++ G N Sbjct: 111 GSEAVENAVKIARAA-----TKRSGVIAFTGAYHGRTH--YTLALTGKVNPYSAGMGLMP 163 Query: 159 -NSYEPLLFDVETIPFPHHN-EEQKTLDDLEK----HCSTQKIAAFLVEPLILGAGGMQT 212 + Y L P P H E + +E+ + + IAA ++EP + G GG Sbjct: 164 GHVYRALY------PCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEP-VQGEGGFYA 216 Query: 213 YRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALP 272 P ++ + ++ +LIADEV TG GRTG +FA + D+ +K I GG P Sbjct: 217 ASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAADLTTFAKSIAGG-FP 275 Query: 273 LAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNL-E 331 LA E+ D+ T Y NPIACAAALA L+++E+E ++++ L E Sbjct: 276 LAGVTGRAEVMDAIAPGGLGGT------YAGNPIACAAALAVLKVFEQENLLQKANALGE 329 Query: 332 RMHADRLSLLKSNKKFVNIRQMGTIVALD 360 ++ L++ + + + ++R +G ++A++ Sbjct: 330 KLKDGLLAIAEKHPEIGDVRGLGAMIAIE 358 >gnl|CDD|179803 PRK04260, PRK04260, acetylornithine aminotransferase; Provisional. Length = 375 Score = 115 bits (289), Expect = 3e-26 Identities = 99/389 (25%), Positives = 174/389 (44%), Gaps = 46/389 (11%) Query: 27 IKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSE--YTHEP 84 +K EG+YLID + K +D S V G HP + A++ + I S Y + Sbjct: 16 VKAEGNYLIDTDGKKYLDFSSGIGVTNLGF-HPQVQQALQKQAG---LIWHSPNLYLNSL 71 Query: 85 AEQLARLLIKIAPLGLQYV-FFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHG 143 E++A+ LI Y+ FF +SG+ + E A+K+A + +I+ ++ +HG Sbjct: 72 QEEVAQKLIG----DKDYLAFFCNSGAEANEAAIKIA-----RKATGKQEIITFQNSFHG 122 Query: 144 DTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLE--KHCSTQKIAAFLVE 201 T GSMS + + + + + PH + +DL K + AA ++E Sbjct: 123 RTFGSMSATGQDKIKDGFGDGV--------PHFS--YAIFNDLNSVKALVNKNTAAVMLE 172 Query: 202 PLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILC 261 L+ G G+ +K ++ LLI DEV TG GRTGK++A H I PDI Sbjct: 173 -LVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIFT 231 Query: 262 LSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKE 321 L+KG+ G +P+ A L H S++ N ++ AAA A L I Sbjct: 232 LAKGLANG-VPVGAMLAKSS-LGGAFGYGS-----HGSTFGGNKLSMAAASATLDIMLTA 284 Query: 322 PVIERI-KNLERMHADRLSLLKSNKKFVNIRQMGTIVALDFNVQNKGYFFDKNAKLKNFF 380 +E+ +N + L+ + +R +G ++ ++ ++L Sbjct: 285 GFLEQALENGNYLQEQLQKALQDKETVTTVRGLGYMIGIETT--------ADLSQLVEAA 336 Query: 381 REKKILIRPLG-HIMYLMPPYCITATDLD 408 R+K +++ G +++ L+PP +T +++ Sbjct: 337 RDKGLIVLTAGTNVIRLLPPLTLTKEEIE 365 >gnl|CDD|177748 PLN00144, PLN00144, acetylornithine transaminase. Length = 382 Score = 114 bits (287), Expect = 4e-26 Identities = 86/353 (24%), Positives = 155/353 (43%), Gaps = 36/353 (10%) Query: 80 YTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGF--FNNNNMPRN----- 132 Y P +LA+ L+ + VFF +SG+ + E A+K A + + Sbjct: 54 YHTIPQVELAKRLVASS--FADRVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSA 111 Query: 133 -KIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCS 191 + V + +HG T+G+++++ + + +EPL+ V + + + ++K Sbjct: 112 TEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEY---GNLEAARKLIQK--- 165 Query: 192 TQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACN 251 K AA VEP + G GG+ L+ + + LL+ DEV G GRTG ++A Sbjct: 166 -GKTAAVFVEP-VQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHE 223 Query: 252 HADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAA 311 + PDI+ L+K + GG LP+ A L +E++ + D H S++ P+ C AA Sbjct: 224 AYGVEPDIMTLAKPLAGG-LPIGAVLVTEKVASAINPGD------HGSTFAGGPLVCNAA 276 Query: 312 LANLQIWEKEPVIERI-KNLERMHADRLSLLKSNKKFVNIRQMGTIVALDFNVQNKGYFF 370 LA L K + + K E + L N +R +G +V + +V Sbjct: 277 LAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKEVRGVGLLVGIQLDVP------ 330 Query: 371 DKNAKLKNFFREKKILIRPL--GHIMYLMPPYCITATDLDHIYNTINEAVDFL 421 L + R+ +L+ G ++ L+PP I+ +L+ + + + L Sbjct: 331 --AGPLVDACRDSGLLVLTAGKGDVVRLVPPLVISEAELEQAVEILADCLPAL 381 >gnl|CDD|168145 PRK05639, PRK05639, 4-aminobutyrate aminotransferase; Provisional. Length = 457 Score = 114 bits (286), Expect = 5e-26 Identities = 109/405 (26%), Positives = 196/405 (48%), Gaps = 54/405 (13%) Query: 31 GSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTH-EPAEQLA 89 G+ + D + + ID ++ + G+ HP ++ A++ + YTH E A ++A Sbjct: 44 GALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIG-YTHSERAIRVA 102 Query: 90 RLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDTIGSM 149 L +I+P+ V F SGS ++++A+K++ + R I+ YHG T+G+ Sbjct: 103 EKLAEISPIENPKVLFGLSGSDAVDMAIKVS-----KFSTRRPWILAFIGAYHGQTLGAT 157 Query: 150 SVSMRGAFNNS----YEPLLFDVETIPFPH----------HNEEQ----KTLDDLEKHCS 191 SV+ AF +S + PL+ +V IP+P+ + E + LD LE + Sbjct: 158 SVA---AFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVF 214 Query: 192 TQ-----KIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGK 246 + ++AA EP I G G+ KE ++ ++ LL+ DEV TG GRTGK Sbjct: 215 SHVVPPDEVAALFAEP-IQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGK 273 Query: 247 IFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYT--AN 304 FA ++ PD++ KG+ G + L+ + +E+ D L+S S+ T AN Sbjct: 274 WFASEWFEVKPDLIIFGKGVASG-MGLSGVIGRKELMD--LTSG-------SALLTPAAN 323 Query: 305 PIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFV-NIRQMGTIVALDFNV 363 P+ AAA A L+I E+E +++ + RL +K + + + ++R G ++ ++ Sbjct: 324 PVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVK 383 Query: 364 QNKGYFFDKNAKLKNFFREKKI-LIRP----LGHIMYLMPPYCIT 403 +N + K+ +R ++ LI P G+++ + PP IT Sbjct: 384 ENGKPDPELTGKI--CWRAFELGLILPSYGMFGNVIRITPPLVIT 426 >gnl|CDD|180758 PRK06931, PRK06931, diaminobutyrate--2-oxoglutarate aminotransferase; Provisional. Length = 459 Score = 112 bits (282), Expect = 2e-25 Identities = 113/444 (25%), Positives = 198/444 (44%), Gaps = 82/444 (18%) Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASEN-------------Y 72 I K +G ++ D ++ +D ++ + GH HP ++ +I+ + Sbjct: 44 IAKAQGVWVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTLDLTTPLK 103 Query: 73 DQIIFSEYTHEPAEQLARLLIKIAPLGLQYV--FFSDSGSTSIEVALKMALGFFNNNNMP 130 D FSEY LL + G +Y F SG+ ++E A+K+A + Sbjct: 104 DA--FSEY----------LLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTG----- 146 Query: 131 RNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPH--------------- 175 R+ ++ GYHG T G+++V+ + N+ L+ V+ +P+PH Sbjct: 147 RSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVK 206 Query: 176 ---HNEEQKTLDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLL 232 + E ++D+E +K AA ++E I G GG+ L++ +T+K+ LL Sbjct: 207 ALTYYFEN-FIEDVES--GVRKPAAVILEA-IQGEGGVNPAPVEWLQKIREVTQKHGILL 262 Query: 233 IADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKK 292 I DEV G+ RTGK+FA HA I PDI+ +SK + GG LPLA +E FD+ Sbjct: 263 IVDEVQAGFARTGKMFAFEHAGIEPDIIVMSKAV-GGGLPLAVLGIKKE-FDAWQPGG-- 318 Query: 293 KTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFV---N 349 H+ ++ N +A A L L+I ++E + + ER + L + K++ N Sbjct: 319 ----HTGTFRGNQLAMATGLTTLKILKEENLAQNAA--ERGEWLKAQLAELQKRYPCIGN 372 Query: 350 IRQMGTIVALDF----NVQNKGYFFDKNAKL-----KNFFREKKILIR--PLGHIMYLMP 398 +R G ++ ++ + + + +L K F +L R G+++ L+P Sbjct: 373 VRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGGRNGNVVRLLP 432 Query: 399 PYCITATD----LDHIYNTINEAV 418 P IT + +D + AV Sbjct: 433 PLLITQAECEEFIDRFEQALLAAV 456 >gnl|CDD|178834 PRK00062, PRK00062, glutamate-1-semialdehyde aminotransferase; Provisional. Length = 426 Score = 103 bits (261), Expect = 6e-23 Identities = 100/341 (29%), Positives = 160/341 (46%), Gaps = 63/341 (18%) Query: 20 NPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSE 79 P F I + +G+YL D + ++ ID + SW + GH HP ++ A+ A+E + F Sbjct: 32 TPRF--IERAKGAYLYDVDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEK--GLSFGA 87 Query: 80 YTHEPAE-QLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVME 138 T E +LA L+I++ P ++ V +SG+ + A+++A G+ R+KI+ E Sbjct: 88 PT--ELEVELAELVIELVP-SIEMVRMVNSGTEATMSAIRLARGYTG-----RDKIIKFE 139 Query: 139 HGYHG--D-----------TIG---SMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQ-K 181 YHG D T+G S V P F T+ P+++ E + Sbjct: 140 GCYHGHADSLLVKAGSGAATLGLPDSPGV-----------PEDFAKHTLTAPYNDLEAVE 188 Query: 182 TLDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFM----RITKKYDTLLIADEV 237 L E++ +IAA +VEP+ AG M P F+ + ++ LLI DEV Sbjct: 189 EL--FEEY--GDEIAAVIVEPV---AGNMGVVPP--KPGFLEGLRELCDEHGALLIFDEV 239 Query: 238 MTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFH 297 MTG+ R A + +TPD+ L K I GG LP+ A EI + L+ + Sbjct: 240 MTGF-RVALGGAQGYYGVTPDLTTLGK-IIGGGLPVGAFGGRREIME-QLAPLGP--VYQ 294 Query: 298 SSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRL 338 + + + NP+A AA LA L++ ++ E LE + RL Sbjct: 295 AGTLSGNPLAMAAGLATLKLLKEPGFYEE---LEAL-TKRL 331 >gnl|CDD|180426 PRK06148, PRK06148, hypothetical protein; Provisional. Length = 1013 Score = 99.3 bits (248), Expect = 2e-21 Identities = 102/416 (24%), Positives = 173/416 (41%), Gaps = 54/416 (12%) Query: 25 KIIKTEGSYLIDENHDKIIDAISSWWVITH-GHRHPIIMNAI--RSASENYDQIIFSEYT 81 K ++ G +LID +D ++ + H GH HP ++ A ++A N + + Y Sbjct: 609 KFVRGWGVWLIDNRGRAYLDCFNN---VCHVGHAHPRVVAAAARQAARLNTN----TRYL 661 Query: 82 H----EPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVM 137 H AE+L L P GL FF +SGS + +AL++A + +V+ Sbjct: 662 HDAIVAYAERLTATL----PDGLTVAFFVNSGSEANSLALRLARAHTGQRDA-----IVL 712 Query: 138 EHGYHGDTIGSMSVS---MRGAFNNSYEPLLFDVETIPFPHHNEE--------QKTLDDL 186 +H YHG T + +S + E +P + E ++ + + Sbjct: 713 DHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAE-VPDSYRGPERWPDAEHGRRFAESV 771 Query: 187 EKHCST-----QKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGW 241 + + + A F+ E I G L+E + + + IADEV G+ Sbjct: 772 AEQIAAMAAKGRGPAFFIAES-IPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGF 830 Query: 242 GRTGK-IFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSS 300 GR G +A + PDI+ + K I G P+ A + + EI DS D +F ++ Sbjct: 831 GRVGSHWWAFETQGVVPDIVTMGKPI-GNGHPMGAVVTTREIADSF---DNGMEYF--NT 884 Query: 301 YTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFV-NIRQMGTI--V 357 + NP++CA LA L I E E + + L L+ + ++R MG + Sbjct: 885 FGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGI 944 Query: 358 ALDFNVQNKGYFFDKNAKLKNFFREKKILIR---PLGHIMYLMPPYCITATDLDHI 410 L + + K +KN RE+ ILI P +++ + PP + D DH+ Sbjct: 945 ELVTDRKTKAPATAIARYVKNGARERGILIGTEGPHDNVLKIRPPLIFSRADADHL 1000 >gnl|CDD|129782 TIGR00699, GABAtrns_euk, 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase. Length = 464 Score = 93.4 bits (232), Expect = 1e-19 Identities = 79/304 (25%), Positives = 131/304 (43%), Gaps = 62/304 (20%) Query: 15 VQHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRS---ASEN 71 V + K+ G+YL+D + ++++D S I G+ +P ++ A +S A+ Sbjct: 38 VHFLADYE-----KSRGNYLVDVDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTL 92 Query: 72 YDQIIFSEYTHEPAEQLARLL----IKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNN 127 ++ + P++ A++L +K+AP G V+ SGS + E+A K A ++ + Sbjct: 93 INRPALGNF---PSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSK 149 Query: 128 N----------------------MPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLL 165 P I+ + +HG GS+S + + P Sbjct: 150 QRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPA- 208 Query: 166 FDVETIPFP------------HHNEEQKTLDDLEK-----HCSTQKIAAFLVEPLILGAG 208 FD PFP + EEQ+ L+++E H +AA +VEP I G Sbjct: 209 FDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHK---PVAAIIVEP-IQSEG 264 Query: 209 GMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADIT--PDILCLSKGI 266 G P ++ ITKK++ I DEV TG G TGK +A H ++ PD++ SK Sbjct: 265 GDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFSKKF 324 Query: 267 -TGG 269 T G Sbjct: 325 QTAG 328 >gnl|CDD|132295 TIGR03251, LAT_fam, L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites. Length = 431 Score = 91.8 bits (228), Expect = 3e-19 Identities = 64/269 (23%), Positives = 113/269 (42%), Gaps = 38/269 (14%) Query: 28 KTEGSYLIDENH-DKIIDAISSWWVITHGHRHPIIMNAIRSASE----------NYDQII 76 ++ GS L+D + +D S + + G HP +++ + + N D + Sbjct: 25 RSRGSVLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSD--V 82 Query: 77 FSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPR----- 131 ++ + AR+L L ++FF + G+ ++E ALK A + + +N R Sbjct: 83 YTVAMARFVDTFARVLG---DPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAA 139 Query: 132 --NKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLL----FDVETIPFPHHNEEQKTLDD 185 +++ + +HG + ++S++ + P D + FP + Sbjct: 140 LGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIA 199 Query: 186 LEKHCSTQ----------KIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIAD 235 LE+ Q IA F+ EP I G GG +RP L+ + ++D LLI D Sbjct: 200 LEEEALRQARAAFAERPHDIACFIAEP-IQGEGGDNHFRPEFLRAMRALCDEHDALLIFD 258 Query: 236 EVMTGWGRTGKIFACNHADITPDILCLSK 264 EV TG G TG +A + PDI+ K Sbjct: 259 EVQTGVGLTGTAWAYQQLGVQPDIVAFGK 287 >gnl|CDD|180427 PRK06149, PRK06149, hypothetical protein; Provisional. Length = 972 Score = 89.7 bits (223), Expect = 1e-18 Identities = 79/304 (25%), Positives = 126/304 (41%), Gaps = 73/304 (24%) Query: 55 GHRHPIIMNAI-RSASE-------NYDQII-FSEYTHEPAEQLARLLIKIAPLGLQYVFF 105 GH HP + A R S +Y + FSE RL +AP GL VF Sbjct: 598 GHGHPRLAAAAARQWSLLNTNSRFHYAAVAEFSE----------RLA-ALAPDGLDTVFL 646 Query: 106 SDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDTIGSMSVS------------- 152 +SGS + ++A+++A ++ V + YHG T+ + +VS Sbjct: 647 VNSGSEANDLAIRLAWAASGRRDV-----VSVLEAYHGWTVATDAVSTSIADNPQALETR 701 Query: 153 ------------MRGAFN--NSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAF 198 RG F +S + DV L++L+ S + +A F Sbjct: 702 PDWVHPVESPNTYRGRFRGADSAADYVRDVVA-----------QLEELDA--SGRGLAGF 748 Query: 199 LVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIF-ACNHADITP 257 + EP+ AGG+ Y L++ + + IADEV G+GR G F + P Sbjct: 749 ICEPVYGNAGGIALPPGY-LQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVP 807 Query: 258 DILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQI 317 DI+ ++KG G PL A + EI ++ + + FF SS +P++C +A L + Sbjct: 808 DIITMAKG-MGNGHPLGAVITRREIAEAL---EAEGYFF--SSTGGSPVSCRIGMAVLDV 861 Query: 318 WEKE 321 +E Sbjct: 862 LREE 865 >gnl|CDD|183493 PRK12389, PRK12389, glutamate-1-semialdehyde aminotransferase; Provisional. Length = 428 Score = 86.2 bits (214), Expect = 1e-17 Identities = 87/328 (26%), Positives = 150/328 (45%), Gaps = 51/328 (15%) Query: 28 KTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAE- 86 + +G+Y D + +K ID ++++ I GH HP I AI A+EN +++ T E Sbjct: 41 RGKGAYFYDVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAEN--GVLYG--TPTELEI 96 Query: 87 QLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHG--- 143 + A++L + P L+ V F +SG+ ++ +++A + R KI+ YHG Sbjct: 97 EFAKMLKEAIP-SLEKVRFVNSGTEAVMTTIRVARAYTG-----RTKIIKFAGCYHGHSD 150 Query: 144 ----------DTIG---SMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHC 190 T+G S V A +V T+PF ++ LD Sbjct: 151 LVLVAAGSGPSTLGTPDSAGVPKSIA---------QEVITVPFNDIEALKEALD----KW 197 Query: 191 STQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFAC 250 + +AA LVEP I+G G+ +P L+ + + L+I DEV+T + R A Sbjct: 198 GDE-VAAVLVEP-IVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYGGAQ 254 Query: 251 NHADITPDILCLSKGITGGALPLAATLCSEEIFD--SHLSSDKKKTFFHSSSYTANPIAC 308 + + PD+ L K I GG LP+ A ++I + + L + + + NP + Sbjct: 255 DLLGVEPDLTALGK-IIGGGLPIGAYGGRKDIMEQVAPLGPA-----YQAGTMAGNPASM 308 Query: 309 AAALANLQIWEKEPVIERIKNLERMHAD 336 AA +A L++ ++E V E++ L M + Sbjct: 309 AAGIACLEVLQQEGVYEKLDRLGAMLEE 336 >gnl|CDD|134334 PRK00615, PRK00615, glutamate-1-semialdehyde aminotransferase; Provisional. Length = 433 Score = 85.2 bits (211), Expect = 3e-17 Identities = 82/313 (26%), Positives = 134/313 (42%), Gaps = 36/313 (11%) Query: 31 GSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEY--THEPAEQL 88 G ID ID SW + HGH HP I +AI+ +E + Y T E Sbjct: 44 GDIFIDSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERG-----TSYGLTSEQEILF 98 Query: 89 ARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHG--DT- 145 A L L + F SG+ + A+++A G R+ I+ YHG DT Sbjct: 99 AEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITG-----RSIIIKFLGCYHGHADTL 153 Query: 146 IGSMSVSMRGAFN-------NSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAF 198 + +S S + PL ++P+ N+ Q + ++A Sbjct: 154 LQGISFSETSLDTLTHLVDTDLAHPLTL---SLPY---NDFQIFQTVMNS--LGHRVAGV 205 Query: 199 LVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPD 258 + EP I G+ +P ++ ++ ++ +L I DEV+TG+ R + A + PD Sbjct: 206 IFEP-ICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGGAAAIYHVKPD 263 Query: 259 ILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIW 318 I K I GG LP AA + + I D HL+ + T F + + + NP+A AA A++ + Sbjct: 264 ITVYGK-ILGGGLPAAAVVAHKSIMD-HLAPE--GTIFQAGTLSGNPLAMAAGKASINLC 319 Query: 319 EKEPVIERIKNLE 331 ++ ++ LE Sbjct: 320 REQGFYTQLSTLE 332 >gnl|CDD|181363 PRK08297, PRK08297, L-lysine aminotransferase; Provisional. Length = 443 Score = 81.9 bits (203), Expect = 3e-16 Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 47/281 (16%) Query: 28 KTEGSYLIDENH-DKIIDAISSWWVITHGHRHPIIMN-----------AIRSASENYDQI 75 +++GSYL+D + +D + + G HP + + A+ S N D Sbjct: 32 RSQGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPS-NSD-- 88 Query: 76 IFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPR---- 131 +++ + AR+L L ++FF D G+ ++E ALK+A + + N R Sbjct: 89 VYTVEMARFVDTFARVLG---DPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDP 145 Query: 132 ---NKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFD-----VETIPFPHHNEEQKTL 183 K++ + +HG + ++S++ + P FD + FP E+ + + Sbjct: 146 ALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPK-FDWPRIDNPKLRFPLPGEDLEEV 204 Query: 184 DDLEKHCSTQ----------KIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLI 233 + LE Q IA F+ EP I G GG +RP + ++D LLI Sbjct: 205 EALEAEALAQARAAFERHPHDIACFIAEP-IQGEGGDNHFRPEFFAAMRELCDEHDALLI 263 Query: 234 ADEVMTGWGRTGKIFACNHADITPDILCLSK-----GITGG 269 DEV TG G TG +A + PDI+ K GI G Sbjct: 264 FDEVQTGVGLTGTAWAYQQLGVRPDIVAFGKKTQVCGIMAG 304 >gnl|CDD|180807 PRK07046, PRK07046, aminotransferase; Validated. Length = 453 Score = 64.2 bits (157), Expect = 6e-11 Identities = 53/201 (26%), Positives = 79/201 (39%), Gaps = 34/201 (16%) Query: 131 RNKIVVMEHGYHG-------DTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTL 183 R KI+V YHG D + V G ++ + F N+ L Sbjct: 156 RPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTR-VVEF---ND----L 207 Query: 184 DDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMT---- 239 LE + +AA L EP + GM P + +T++Y TLL+ DE T Sbjct: 208 AALEAALADGDVAAVLAEP-AMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSG 266 Query: 240 --GWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFH 297 G+ R + PD L + K I GG +P A S E+ + ++ H Sbjct: 267 PGGYTRA--------HGLEPDFLVVGKPIAGG-VPCAVYGFSAELAERAQAAKASAPPGH 317 Query: 298 S---SSYTANPIACAAALANL 315 S ++ +AN +A AA A L Sbjct: 318 SGIGTTLSANALAMAAMRATL 338 >gnl|CDD|178100 PLN02482, PLN02482, glutamate-1-semialdehyde 2,1-aminomutase. Length = 474 Score = 64.4 bits (157), Expect = 6e-11 Identities = 80/301 (26%), Positives = 134/301 (44%), Gaps = 35/301 (11%) Query: 28 KTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAE- 86 + +GSY D + ++ ID + SW GH ++ A+ + F P Sbjct: 87 RVKGSYAWDVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTS--FGA----PCLL 140 Query: 87 --QLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHG- 143 LA ++I P ++ V F +SG+ + L++A + R KI+ E YHG Sbjct: 141 ENVLAEMVIDAVP-SVEMVRFVNSGTEACMGVLRLARAYTG-----REKIIKFEGCYHGH 194 Query: 144 -DTI----GSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQK--IA 196 D+ GS V+ G ++ P T+ P+++ L+ ++K K IA Sbjct: 195 ADSFLVKAGS-GVATLGLPDSPGVPKAATSATLTAPYND-----LEAVKKLFEANKGEIA 248 Query: 197 AFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADIT 256 A ++EP++ G G + L+ ITK+ LL+ DEVMTG+ R A + IT Sbjct: 249 AVILEPVV-GNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGIT 306 Query: 257 PDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQ 316 PD+ L K + GG LP+ A EI + + + + + + NP+A A + L+ Sbjct: 307 PDLTTLGK-VIGGGLPVGAYGGRREIMEMVAPAGP---MYQAGTLSGNPLAMTAGIHTLK 362 Query: 317 I 317 Sbjct: 363 R 363 >gnl|CDD|180471 PRK06209, PRK06209, glutamate-1-semialdehyde 2,1-aminomutase; Provisional. Length = 431 Score = 55.8 bits (135), Expect = 2e-08 Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 13/142 (9%) Query: 193 QKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTG--WGRTGKIFAC 250 +IA ++EP + L E R+ + L I DE++TG W G A Sbjct: 186 GRIACVILEP-----ATADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRG---AQ 237 Query: 251 NHADITPDILCLSKGITGGALPLAATLCSEEI--FDSHLSSDKKKTFFHSSSYTANPIAC 308 I PD+ C K + G ++A E +D+++ F S+++ A A Sbjct: 238 KLYGIVPDLSCFGKAL-GNGFAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHAL 296 Query: 309 AAALANLQIWEKEPVIERIKNL 330 AAA+A + I+ E VIER+ Sbjct: 297 AAAIATMAIYRDEDVIERLHEQ 318 >gnl|CDD|180327 PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed. Length = 385 Score = 37.8 bits (89), Expect = 0.006 Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 21/124 (16%) Query: 218 LKEFMRITKKYDTLLIADEVM-TG-WGRTGK--IFACNHADITPDILC--LSK--GITGG 269 L E + + +++ L+ DE TG G G+ A IL L K G +G Sbjct: 187 LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSGA 246 Query: 270 ALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTA-NPIACAAALANLQIWEKEPVIERIK 328 A+ L SE + D +L ++ + F + TA P AAA A L+I +EP ER + Sbjct: 247 AV-----LGSETLID-YL-INRARPFIFT---TALPPAQAAAARAALRILRREP--ERRE 294 Query: 329 NLER 332 L Sbjct: 295 RLAA 298 >gnl|CDD|129937 TIGR00858, bioF, 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model. Length = 360 Score = 35.3 bits (82), Expect = 0.029 Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 16/127 (12%) Query: 218 LKEFMRITKKYDTLLIADE-----VMTGWGR-TGKIFACNHADITPDILCLSKGITGGAL 271 L + + + ++Y L+ D+ V+ GR T + F + + LSK + G Sbjct: 165 LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKAL-GSYG 223 Query: 272 PLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLE 331 A S+ + D +L ++ +T S++ P AAALA L++ ++EP R + L Sbjct: 224 --AYVAGSQALID-YLI-NRARTLIFSTALP--PAVAAAALAALELIQEEP--WRREKLL 275 Query: 332 RMHADRL 338 RL Sbjct: 276 A-LIARL 281 >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 Score = 33.6 bits (77), Expect = 0.11 Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 8/78 (10%) Query: 307 ACAAALANLQIWEKEPVIERIKNLERM------HADRLSLLKSNKKFVNIRQMGTIVALD 360 A AA + W + ER + L ++ HAD +++L+ +RQ V Sbjct: 43 AAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIAVLECLDCGQPLRQTRQQVIRA 102 Query: 361 FNVQNKGYFFDKNAKLKN 378 N +F DK + + Sbjct: 103 AE--NFRFFADKCEEAMD 118 >gnl|CDD|162663 TIGR02021, BchM-ChlM, magnesium protoporphyrin O-methyltransferase. This model represents the S-adenosylmethionine-dependent O-methyltransferase responsible for methylation of magnesium protoporphyrin IX. This step is essentiasl for the biosynthesis of both chlorophyll and bacteriochlorophyll. This model encompasses two closely related clades, from cyanobacteria (and plants) where it is called ChlM and other photosynthetic bacteria where it is known as BchM. Length = 219 Score = 30.2 bits (68), Expect = 1.0 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 63 NAIRSASENYDQII-FSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMAL 121 N + S +D ++ H PA +A+ L +A L + V F+ + T+ LKM Sbjct: 111 NDLLSLCGEFDIVVCMDVLIHYPASDMAKALGHLASLTKERVIFTFAPKTAWLAFLKMIG 170 Query: 122 GFF 124 F Sbjct: 171 ELF 173 >gnl|CDD|185520 PTZ00226, PTZ00226, fumarate hydratase; Provisional. Length = 570 Score = 30.0 bits (68), Expect = 1.1 Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 4/48 (8%) Query: 156 AFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLVEPL 203 ++ P+ V+ PH EE + L+DL + ++ E L Sbjct: 26 NPEFNFVPIFQPVD----PHDTEEYRRLEDLSDYVEVVEVGGGGKEIL 69 >gnl|CDD|180734 PRK06855, PRK06855, aminotransferase; Validated. Length = 433 Score = 29.5 bits (67), Expect = 1.5 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 11/60 (18%) Query: 183 LDDLEKHC-STQKIAAFLV----EPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEV 237 LDDLE IA L+ P G Y IL+E + I ++YD +I DE+ Sbjct: 159 LDDLENKVKYNPSIAGILLINPDNPT-----GA-VYPKEILREIVDIAREYDLFIICDEI 212 >gnl|CDD|183994 PRK13355, PRK13355, bifunctional HTH-domain containing protein/aminotransferase; Provisional. Length = 517 Score = 29.3 bits (66), Expect = 2.0 Identities = 13/56 (23%), Positives = 28/56 (50%), Gaps = 11/56 (19%) Query: 213 YRPYILKEFMRITKKYDTLLIADE-----VMTGWGRTGKIFACNHADITPDILCLS 263 Y +L++ + I +++ ++ +DE VM G T + A + PD+ C++ Sbjct: 298 YPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHT------SIASLAPDLFCVT 347 >gnl|CDD|182912 PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional. Length = 330 Score = 28.8 bits (65), Expect = 2.6 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 13/55 (23%) Query: 286 HLSSDKKKTFFHSSSYTAN-----PIACAAALANLQIWEKEPVIERIKNLERMHA 335 H+S+D + F S+SY AN P+ I+ I+ LE H+ Sbjct: 84 HISTDHQGRFLFSASYNANCVSVSPLDKDGIPVA--------PIQIIEGLEGCHS 130 >gnl|CDD|183321 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed. Length = 1318 Score = 28.8 bits (65), Expect = 2.7 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 18/68 (26%) Query: 307 ACAAALANLQIWEKEPVIERIKNLER----MHADRLSLL-----KSNKKFVN----IRQM 353 A +A+ IW P ER LER M A +L+ ++ K F N +R+ Sbjct: 687 ALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLMGLLVREAGKTFSNAIAEVRE- 745 Query: 354 GTIVALDF 361 A+DF Sbjct: 746 ----AVDF 749 >gnl|CDD|151695 pfam11253, DUF3052, Protein of unknown function (DUF3052). This family of proteins with unknown function appears to be restricted to Actinobacteria. Length = 127 Score = 28.8 bits (65), Expect = 3.0 Identities = 10/20 (50%), Positives = 16/20 (80%) Query: 31 GSYLIDENHDKIIDAISSWW 50 GS L+DE++D ++DA+ WW Sbjct: 34 GSELVDEDYDDVVDAVLLWW 53 >gnl|CDD|183372 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed. Length = 1208 Score = 28.3 bits (64), Expect = 3.4 Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 12/54 (22%) Query: 306 IACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFVNIRQMGTIVAL 359 A AAA A W P ER LER AD + M + AL Sbjct: 594 RALAAAQAAFPEWSATPAAERAAILERA-ADLME-----------AHMPELFAL 635 >gnl|CDD|180840 PRK07105, PRK07105, pyridoxamine kinase; Validated. Length = 284 Score = 27.6 bits (62), Expect = 6.2 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 17/57 (29%) Query: 217 ILKEFMRITKKYDTLLIADEVMTGWGRTGKIFA-------------CNHAD-ITPDI 259 I+ +F++ KK D L++ D VM G GK++ AD ITP++ Sbjct: 92 IVSDFIKYFKKKDLLVVVDPVM---GDNGKLYQGFDQEMVEEMRKLIQKADVITPNL 145 >gnl|CDD|163168 TIGR03167, tRNA_sel_U_synt, tRNA 2-selenouridine synthase. The Escherichia coli YbbB protein was shown to encode a selenophosphate-dependent tRNA 2-selenouridine synthase, essential for modification of some tRNAs to replace a sulfur atom with selenium. This enzyme works with SelD, the selenium donor protein, which also acts in selenocysteine incorporation. Although the members of this protein family show a fairly deep split, sequences from both sides of the split are supported by co-occurence with, and often proximity to, the selD gene. Length = 311 Score = 27.6 bits (62), Expect = 7.2 Identities = 9/37 (24%), Positives = 21/37 (56%), Gaps = 2/37 (5%) Query: 208 GGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRT 244 GG + YR +++ + + + + +++ MTG G+T Sbjct: 107 GGYKAYRRFVIDQLEELPQPFPLIVLGG--MTGSGKT 141 >gnl|CDD|148126 pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA). This family consists of several Ribosomal protein L11 methyltransferase (EC:2.1.1.-) sequences. Length = 294 Score = 27.2 bits (61), Expect = 8.3 Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 5/42 (11%) Query: 21 PTFKKIIKTEG----SYLIDENHDKIIDAISSWW-VITHGHR 57 P ++K G S +++E D + +A S + +IT R Sbjct: 242 PDIYALVKPGGYLILSGILEEQADDVAEAYSQGFELITVEER 283 >gnl|CDD|180923 PRK07309, PRK07309, aromatic amino acid aminotransferase; Validated. Length = 391 Score = 27.0 bits (60), Expect = 10.0 Identities = 20/71 (28%), Positives = 24/71 (33%), Gaps = 34/71 (47%) Query: 212 TYRPYILKEFMRITKKYDTLLIADEV---------------------------------M 238 TY +K + KKYD +I+DEV M Sbjct: 182 TYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAM 241 Query: 239 TGWGRTGKIFA 249 TGW R G IFA Sbjct: 242 TGW-RIGLIFA 251 Database: CddB Posted date: Feb 4, 2011 9:54 PM Number of letters in database: 5,994,473 Number of sequences in database: 21,608 Lambda K H 0.322 0.137 0.419 Gapped Lambda K H 0.267 0.0731 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21608 Number of Hits to DB: 7,110,810 Number of extensions: 464223 Number of successful extensions: 1285 Number of sequences better than 10.0: 1 Number of HSP's gapped: 990 Number of HSP's successfully gapped: 114 Length of query: 423 Length of database: 5,994,473 Length adjustment: 96 Effective length of query: 327 Effective length of database: 3,920,105 Effective search space: 1281874335 Effective search space used: 1281874335 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 58 (26.1 bits)