HHsearch alignment for GI: 254780489 and conserved domain: COG3425
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism].
Probab=100.00 E-value=2.1e-42 Score=297.04 Aligned_cols=300 Identities=21% Similarity=0.254 Sum_probs=242.8
Q ss_pred CCEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
Q ss_conf 62099999973588613888999880999768311147508899489887999999999998643013222344258843
Q gi|254780489|r 4 SSSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLAT 83 (325)
Q Consensus 4 ~~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s 83 (325)
T Consensus 1 ~~iGI~~~g~y~p~~~i~~~ela~~~g~d~~k~~~gl~~~e~sv~~~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgT 80 (377)
T COG3425 1 MMIGIVGIGAYIPRYRIKLEELARAWGVDPEKIKKGLGVEEKSVPPWDEDAVTMAVEAARNALKRADIDPSKIGAVIVGS 80 (377)
T ss_pred CCCCCCEEEEECCCEEEEHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEC
T ss_conf 95551238885662386099997632888377653004234467997420899999999998751388988966699953
Q ss_pred EEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHCCC-CEEEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 100236887432211210023-86333421012310125676578874388-5058862012244446222443432544
Q gi|254780489|r 84 STPDHLLPPSSPLITHRLGLM-QSGAIDLTGACAGFLYALVMADSYINSHQ-KPVLIIAANLLSRRINLEDKDTAIIFGD 161 (325)
Q Consensus 84 ~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~~~C~g~l~aL~~A~~~i~~g~-~~vLVv~~e~~S~~~d~~d~~~~~lfGD 161 (325)
T Consensus 81 ES~~d~~K~~at~v~~~lg~~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~--~~~~~-~E~t~GA 157 (377)
T COG3425 81 ESGPDAVKPTATIVAEALGLNPSARAADVEFACYAGTAALQAAIGWVESGMISYGLVIGADTAQY--APGDA-LEYTAGA 157 (377)
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCC--CCCCC-CCCCCCC
T ss_conf 77765444058999998389975120567878998899999999999728755417996311035--88865-6766778
Q ss_pred CEEEEEECCCCCCCCCCCEEEEEEECCC-CCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 2001122057654445311355321367-765278306986676544556552322451454343201003678988997
Q gi|254780489|r 162 AAGAVVLAPSPLKDKSGILGIELTSDGS-KYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRK 240 (325)
Q Consensus 162 gA~A~il~~~~~~~~~~il~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~ 240 (325)
T Consensus 158 GavA~lIg~n~~~---~a~~~~~~syt~d~~DF--------wRp~~~~yp-----~~dg~~s~~~Y~~~~~~a~~~~~~k 221 (377)
T COG3425 158 GAVAFLIGKNPPI---VAEFEGTGSYTTDTPDF--------WRPDGQPYP-----YVDGRFSEPAYFKHVENAAKGYMEK 221 (377)
T ss_pred CEEEEEEECCCCE---EEEECCCEEEECCCCCC--------CCCCCCCCC-----CCCCEECHHHHHHHHHHHHHHHHHH
T ss_conf 6089998069872---78724756774577761--------466898466-----4076355899999999999999998
Q ss_pred HCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH---HHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCC
Q ss_conf 40120012246305654138999999719786570021---854093300059999999998067899989999986155
Q gi|254780489|r 241 SDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNS---LKDFGNSSSASIPLSLSLENQRKPFQKGEKILTISCRRG 317 (325)
Q Consensus 241 ~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~---l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G 317 (325)
T Consensus 222 ~gls~~dfdy~vfH~P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~Ld~a~-~~G~rIl~~SYGSG 300 (377)
T COG3425 222 TGLSPDDFDYIVFHQPNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSG 300 (377)
T ss_pred HCCCHHHHCEEEECCCCCCHHHHHHHHHCCCHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCC-CCCCEEEEEEECCC
T ss_conf 38984550759831798724899999857347662843011665275111069999999985267-88887999960788
Q ss_pred CCCCCC
Q ss_conf 102010
Q gi|254780489|r 318 NDRGIY 323 (325)
Q Consensus 318 ~s~ga~ 323 (325)
T Consensus 301 a~s~~f 306 (377)
T COG3425 301 AGSEAF 306 (377)
T ss_pred CCEEEE
T ss_conf 525678