HHsearch alignment for GI: 254780489 and conserved domain: PRK05952
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed.
Probab=99.48 E-value=4.6e-12 Score=98.71 Aligned_cols=277 Identities=18% Similarity=0.253 Sum_probs=158.6
Q ss_pred CEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEE-E-----------ECCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 209999997358861388899988099976831114750889-9-----------4898879999999999986430132
Q gi|254780489|r 5 SSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRY-W-----------AEKHETLTDIAIQAGDIALRNANIK 72 (325)
Q Consensus 5 ~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~-~-----------~~~~e~~~~la~~Aa~~aL~~a~~~ 72 (325)
T Consensus 3 RVVITGiG~vSplG--~~~e~w~~------L~~G~sgI~~~~~f~~~~~~~~~~~~~~~~~~~~l~~~a~~~Al~dAgl~ 74 (379)
T PRK05952 3 KVVVTGIGLVSALG--SLEQSWQR------LLQGKSGIKLHQPFPELPPLPLGLIGSQPISLEDLTQTTVTAALKDAGLT 74 (379)
T ss_pred EEEEECCEEECCCC--CHHHHHHH------HHCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf 79994511068888--85999999------97689882567777777761420027785689999999999999977999
Q ss_pred CC--CCCEEEEEEEEEC--------------------------CCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 22--3442588431002--------------------------36887-4322112100238633342101231012567
Q gi|254780489|r 73 KD--SISLTLLATSTPD--------------------------HLLPP-SSPLITHRLGLMQSGAIDLTGACAGFLYALV 123 (325)
Q Consensus 73 ~~--dId~ii~~s~t~d--------------------------~~~P~-~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~ 123 (325)
T Consensus 75 ~~~~~~gv~-~Gt~~g~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~ia~~~g~~G-~~~~~~~aCaS~~~Ai~ 152 (379)
T PRK05952 75 PPLTDCGVV-IGSSRGFQGQWEKLARQIYVGDQSGDEAEENWLDTLPHQAAIATARQIGAQG-PVLAPMAACATGIWAIA 152 (379)
T ss_pred CCCCCEEEE-EEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC-CEECCCCHHHHHHHHHH
T ss_conf 975465899-9967526768999998752047888667216999853399999999839999-62040127478999999
Q ss_pred HHHHHHHCC-CCEEEEEEECC-CCCC---------------CCCCC-CCCCCCCCCCEEEEEECCCCCCCCC--CCEEEE
Q ss_conf 657887438-85058862012-2444---------------46222-4434325442001122057654445--311355
Q gi|254780489|r 124 MADSYINSH-QKPVLIIAANL-LSRR---------------INLED-KDTAIIFGDAAGAVVLAPSPLKDKS--GILGIE 183 (325)
Q Consensus 124 ~A~~~i~~g-~~~vLVv~~e~-~S~~---------------~d~~d-~~~~~lfGDgA~A~il~~~~~~~~~--~il~~~ 183 (325)
T Consensus 153 ~A~~~I~~G~~d~~i~gg~~~~~~~~~~~~f~~~~~ls~~~~rPFd~~r~G~v~gEGa~~lvLE~~~~A~~rga~iya~- 231 (379)
T PRK05952 153 QGAELIQTGQCQRVIAGAVESPITPLTLAGFQKMGALAKTGAYPFDRQREGLVLGEGGAILVLESEELAQKRGAKIYGQ- 231 (379)
T ss_pred HHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCHHHHHHCCCCEEEE-
T ss_conf 9999998399887986787652482768999865783446767454689960258750467645599998789956899-
Q ss_pred EEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHH--
Q ss_conf 321367765278306986676544556552322451454343201003678988997401200122463056541389--
Q gi|254780489|r 184 LTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQANSRII-- 261 (325)
Q Consensus 184 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~-- 261 (325)
T Consensus 232 i~g~~~~~d~~~~----------------~~~~~~g~--------~~~~am~~al~~agi~~~~Idyi~aHgtgT~~~D~ 287 (379)
T PRK05952 232 ILGFGLTCDAYHM----------------SAPEPSGK--------SAILAIQQCLARSGLTPEDIDYIHAHGTATRLNDQ 287 (379)
T ss_pred EECCEECCCCCCC----------------CCCCCCHH--------HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCH
T ss_conf 9352553689888----------------78898989--------99999999999849983335289946787877699
Q ss_pred ---HHHHHHCCCCHHHHH-H-HHHHCCCCCCCHHHHHHH---HHHHHCCCCC---------------------CCEEEEE
Q ss_conf ---999997197865700-2-185409330005999999---9998067899---------------------9899999
Q gi|254780489|r 262 ---QKVCEKIGLSKRIMV-N-SLKDFGNSSSASIPLSLS---LENQRKPFQK---------------------GEKILTI 312 (325)
Q Consensus 262 ---~~~~~~lgi~~~~~~-~-~l~~~GN~~sAsi~~~L~---~~~~~g~i~~---------------------Gd~vll~ 312 (325)
T Consensus 288 ~E~~ai~~vfg---~~~~v~s~Ks~~GH~~~aaG~~e~~~~~l~l~~~~ippt~n~~~p~~~l~~v~~~~~~~~~~aL~n 364 (379)
T PRK05952 288 REANLIQTLFP---HRVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEFDLNFVRQARQSPLKNVLCL 364 (379)
T ss_pred HHHHHHHHHHC---CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 99999999718---778877874332453277799999999999953971898899999989987787633788899996
Q ss_pred EECCCCC
Q ss_conf 8615510
Q gi|254780489|r 313 SCRRGND 319 (325)
Q Consensus 313 ~~G~G~s 319 (325)
T Consensus 365 sfgfGG~ 371 (379)
T PRK05952 365 SFGFGGQ 371 (379)
T ss_pred EECCCCE
T ss_conf 2258736