HHsearch alignment for GI: 254780489 and conserved domain: PRK06065
>PRK06065 acetyl-CoA acetyltransferase; Provisional.
Probab=99.54 E-value=7.2e-13 Score=103.99 Aligned_cols=227 Identities=19% Similarity=0.147 Sum_probs=141.0
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 988799999999999864301322234425884310023688--743221121002386333421012310125676578
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLP--PSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADS 127 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P--~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~ 127 (325)
T Consensus 26 ~~~s~~eL~~eA~~~Al~DAGl~~~dID~~~~g~~-~~~~~g~~~~~~~~~~~~g~~~~p~~~v~~~~asg~~a~~~A~~ 104 (393)
T PRK06065 26 MLETPQELAWEAARQALDEAGLELKDIDCVVIGSA-PDAFDGVHMKGEYLAHGSGGIRKPVSRVFVGGATGVMVPIAGWY 104 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECC-CCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH
T ss_conf 99999999999999999984999899899999556-76545432036899975477788447874452788999999999
Q ss_pred HHHCC-CCEEEEEEECCCCCC-----------CCC--C------------------------------------------
Q ss_conf 87438-850588620122444-----------462--2------------------------------------------
Q gi|254780489|r 128 YINSH-QKPVLIIAANLLSRR-----------INL--E------------------------------------------ 151 (325)
Q Consensus 128 ~i~~g-~~~vLVv~~e~~S~~-----------~d~--~------------------------------------------ 151 (325)
T Consensus 105 ~I~sG~~d~vlvvg~ek~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~Al~a~rym~~yG~t~E~lA~Vav~~r~~A~~ 184 (393)
T PRK06065 105 HVASGLCKKVLAVAEEKMSPARPHPQSVFRYIWDPILEKPLNPNLIWIFAMEMHRYMHVCGVKKEDIALVSVKNKRNALN 184 (393)
T ss_pred HHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 98678776899987404688876631466630350113667886799999999999998499999999999999998744
Q ss_pred C-------CC-------C-----------CCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCC
Q ss_conf 2-------44-------3-----------432544200112205765444531135532136776527830698667654
Q gi|254780489|r 152 D-------KD-------T-----------AIIFGDAAGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAG 206 (325)
Q Consensus 152 d-------~~-------~-----------~~lfGDgA~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~ 206 (325)
T Consensus 185 NP~A~~r~~~t~edvl~S~~Ia~PL~l~Dc~~~sDGAaAvVl~s~e~A~~l~~~pv~I~g~g~~~~~--------~~--- 253 (393)
T PRK06065 185 NPYAQLAANITVEDVLNSEVLVWPVQLLDVSPVSDGAAAMVLASEDVARRYTDTPVWVEGVGWTLDN--------TE--- 253 (393)
T ss_pred CCHHHCCCCCCHHHHCCCCCCHHCCCHHHCCCCCCCEEEEEEECHHHHHHCCCCCEEEEEEEEECCC--------CC---
T ss_conf 9296647999968860474122132425318878821899994489997568997899999974367--------66---
Q ss_pred CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCC--CCCCEEEECCCCCHHHHHHHHHCCCCHH----H------
Q ss_conf 455655232245145434320100367898899740120--0122463056541389999997197865----7------
Q gi|254780489|r 207 TNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQP--QDINRFIPHQANSRIIQKVCEKIGLSKR----I------ 274 (325)
Q Consensus 207 ~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~--~did~~i~Hq~~~~~~~~~~~~lgi~~~----~------ 274 (325)
T Consensus 254 ~~~~d~~------------~~~~~~~aa~~Ay~~AGi~~p~~DiDv~evyD~Ft~~el~~lE~lGfc~~Ge~~~~v~~G~ 321 (393)
T PRK06065 254 WTNRDLA------------YPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDYKELHHIEGLMLAKRGEAPKLLKEGV 321 (393)
T ss_pred CCCCCCC------------CCHHHHHHHHHHHHHCCCCCCHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHCCC
T ss_conf 4545533------------2179999999999976999972007379850675088999999849998983799997799
Q ss_pred ------HHHH----HHHCCCCCCCHHHHHHHHHHHH
Q ss_conf ------0021----8540933000599999999980
Q gi|254780489|r 275 ------MVNS----LKDFGNSSSASIPLSLSLENQR 300 (325)
Q Consensus 275 ------~~~~----l~~~GN~~sAsi~~~L~~~~~~ 300 (325)
T Consensus 322 ~~~~G~lPvNtsGGlls~Ghp~gatG~~~~~Ea~~Q 357 (393)
T PRK06065 322 FDRDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYWQ 357 (393)
T ss_pred CCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHH
T ss_conf 567997135389710028885615699999999999