HHsearch alignment for GI: 254780489 and conserved domain: PRK06365
>PRK06365 acetyl-CoA acetyltransferase; Provisional.
Probab=99.52 E-value=2.2e-12 Score=100.82 Aligned_cols=241 Identities=16% Similarity=0.128 Sum_probs=141.0
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 988799999999999864301322234425884310023688--743221121002386333421012310125676578
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLP--PSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADS 127 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P--~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~ 127 (325)
T Consensus 19 ~~~~~~~l~~eA~~~AL~DAGl~~~dIDg~v~~~~-~~~~~~~~~~g~~~~~~lGl~~~p~~~ve~~casg~~a~~~A~~ 97 (415)
T PRK06365 19 PNMDFRLRVKKAFDYAMNDAGLTLADIDGSVASYF-SDHFQRQLMAGIMVQDYLGLVPKPSKRIEGGGATGGLAFQAGYE 97 (415)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEC-CCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH
T ss_conf 99889999999999999975999899698889841-78664210055899997188886425773772899999999999
Q ss_pred HHHCC-CCEEEEEEECCCCCCC------------C--CCCC---------------------------------------
Q ss_conf 87438-8505886201224444------------6--2224---------------------------------------
Q gi|254780489|r 128 YINSH-QKPVLIIAANLLSRRI------------N--LEDK--------------------------------------- 153 (325)
Q Consensus 128 ~i~~g-~~~vLVv~~e~~S~~~------------d--~~d~--------------------------------------- 153 (325)
T Consensus 98 ~I~sG~~d~vlv~G~ek~s~~~~~~~~~~~~~~~d~~~e~p~g~~~~~~~Al~a~rym~~yG~t~e~lA~Vavk~r~~A~ 177 (415)
T PRK06365 98 EIASGRMDVVAVYGFETMSHVNTWKGNEFIALASDTNFDYPIGGFYTGYYAMMAVRHMYEFGTTVEQMAKVSVKNHGNAI 177 (415)
T ss_pred HHHCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
T ss_conf 99708787899974114567886665311102566553454555448899999999999869889999999999877552
Q ss_pred -------------------------CC---CCCCCCCEEEEEECCCCCCCCC-----CCEEEEEEECCCCCCEEEEECCC
Q ss_conf -------------------------43---4325442001122057654445-----31135532136776527830698
Q gi|254780489|r 154 -------------------------DT---AIIFGDAAGAVVLAPSPLKDKS-----GILGIELTSDGSKYDLIKIPTGG 200 (325)
Q Consensus 154 -------------------------~~---~~lfGDgA~A~il~~~~~~~~~-----~il~~~~~s~~~~~~~~~~~~~~ 200 (325)
T Consensus 178 ~NP~A~~~~~iTvedvl~s~~Ia~PL~lldcc~~sDGAaAvVl~see~Ar~~~~~pV~I~g~g~~~~-----~~~~~~r~ 252 (415)
T PRK06365 178 HNPYAQSPMKLTVEDVRKAPMVSYPLTRLDVCAMSDGAAVAILASEDKAFEITDHPVLIKAIGTGTD-----TMRLADRP 252 (415)
T ss_pred CCHHHHCCCCCCHHHHHCCCCCCCCCHHHCCCCCCCCEEEEEEECHHHHHHCCCCCEEEEEEEEECC-----CCCCCCCC
T ss_conf 5937648888998998318844367202126888886499999458988655799779999997125-----42003454
Q ss_pred C-CCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCC--CCCCEEEECCCCCHHHHHHHHHCCCCHH----
Q ss_conf 6-67654455655232245145434320100367898899740120--0122463056541389999997197865----
Q gi|254780489|r 201 S-TSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQP--QDINRFIPHQANSRIIQKVCEKIGLSKR---- 273 (325)
Q Consensus 201 ~-~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~--~did~~i~Hq~~~~~~~~~~~~lgi~~~---- 273 (325)
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Aa~~Ay~~AGi~~p~~DiDv~ev~D~Ft~~el~~lE~lGfc~~Geg~ 330 (415)
T PRK06365 253 FGEVPLLPNENPSDYKNLKYPGVH--SFRAGRMAAKEAYERANITDPLNDLDLIELHDAYTSSEIQTYEDLGLCKYGEGG 330 (415)
T ss_pred CCCCCCCCCCCCCHHHCCCCCCCC--CHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCHH
T ss_conf 444544445672011023455410--027999999999997499996145877998457629999999984998898389
Q ss_pred ------------HHHHH----HHHCCCCCCCHHHHHHHHHH
Q ss_conf ------------70021----85409330005999999999
Q gi|254780489|r 274 ------------IMVNS----LKDFGNSSSASIPLSLSLEN 298 (325)
Q Consensus 274 ------------~~~~~----l~~~GN~~sAsi~~~L~~~~ 298 (325)
T Consensus 331 ~~v~~G~~~~~G~lPvN~sGGlls~Ghp~GatG~~q~vE~~ 371 (415)
T PRK06365 331 QFIDEGKPELDGKIPVNPSGGLLAAGHPVGATGIMQAVFMF 371 (415)
T ss_pred HHHHCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHH
T ss_conf 99977996689971267885233078656513999999999