HHsearch alignment for GI: 254780489 and conserved domain: PRK08963
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed.
Probab=93.87 E-value=0.072 Score=32.07 Aligned_cols=69 Identities=16% Similarity=0.126 Sum_probs=40.9
Q ss_pred HHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHH----------HCC-------CCHHHHHHHH--HHCCCCCCCH---
Q ss_conf 67898899740120012246305654138999999----------719-------7865700218--5409330005---
Q gi|254780489|r 232 QSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCE----------KIG-------LSKRIMVNSL--KDFGNSSSAS--- 289 (325)
Q Consensus 232 ~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~----------~lg-------i~~~~~~~~l--~~~GN~~sAs--- 289 (325)
T Consensus 321 ~Ai~k~L~ragl~~~Did~~EinEAFAaq~la~~~~l~~~~f~~~~lg~~~~~g~id~~kvN~~GGaIAlGHP~GaTGar 400 (436)
T PRK08963 321 YATPLALERAGLTLADLTLIDMHEAFAAQTLANLQMFASDRFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGAR 400 (436)
T ss_pred HHHHHHHHHCCCCHHHCCEEEEHHHCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHCCCCCCCHHH
T ss_conf 99999999849998999877751235788999999852025667751443333559787758885388757881225899
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999980
Q gi|254780489|r 290 IPLSLSLENQR 300 (325)
Q Consensus 290 i~~~L~~~~~~ 300 (325)
T Consensus 401 l~~tl~~~L~~ 411 (436)
T PRK08963 401 MITQTLHELRR 411 (436)
T ss_pred HHHHHHHHHHH
T ss_conf 99999999998