HHsearch alignment for GI: 254780489 and conserved domain: TIGR02845
>TIGR02845 spore_V_AD stage V sporulation protein AD; InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation ..
Probab=99.58 E-value=1.4e-14 Score=115.09 Aligned_cols=259 Identities=21% Similarity=0.301 Sum_probs=167.1
Q ss_pred CCCEEEEEEEEECCCC----CCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHH-----HHHHHHHHHHCCCCC
Q ss_conf 6620999999735886----1388899988099976831114750889948988799999-----999999864301322
Q gi|254780489|r 3 KSSSCILGFGHAVPNQ----CIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIA-----IQAGDIALRNANIKK 73 (325)
Q Consensus 3 ~~~~~I~g~g~~lP~~----~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la-----~~Aa~~aL~~a~~~~ 73 (325)
T Consensus 7 ~~pp~I~s~gt~vGP~Eg~GPL~~-----~FD~----~~~d-----l-~--~ge~SwEkAEr~lm~~Av~~aL~Ka~l~~ 69 (331)
T TIGR02845 7 ENPPVIVSAGTAVGPKEGEGPLGD-----YFDK----IYDD-----L-Y--CGEDSWEKAERKLMEDAVNLALKKANLKK 69 (331)
T ss_pred CCCCEEEEEEEEEECCCCCCCCCC-----CCCC----EECC-----C-C--CCCCCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 488789986578506347896862-----1252----2014-----4-3--57201899999999999999875358712
Q ss_pred C--CCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCC---CC
Q ss_conf 2--3442588431002368874322112100238633342101231012567657887438-8505886201224---44
Q gi|254780489|r 74 D--SISLTLLATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSH-QKPVLIIAANLLS---RR 147 (325)
Q Consensus 74 ~--dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S---~~ 147 (325)
T Consensus 70 ~PP~vD~~L-AGDLLNQ~~--~anFvAR~L~iPf---lGLygACsTs~E~L~~gA~lv~GGfAd~vLaAtSSHy~taERQ 143 (331)
T TIGR02845 70 DPPDVDFFL-AGDLLNQII--TANFVARELGIPF---LGLYGACSTSMETLALGAMLVDGGFADRVLAATSSHYATAERQ 143 (331)
T ss_pred CCCCEEEEE-HHHHHHHHH--HHHHHHHHCCCCC---EECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHH
T ss_conf 787211120-103666789--9989887458882---3402135789999999999983200221111211113532210
Q ss_pred CC-CCC-----CCC--C-CCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 46-222-----443--4-32544200112205765444531135532136776527830698667654455655232245
Q gi|254780489|r 148 IN-LED-----KDT--A-IIFGDAAGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITN 218 (325)
Q Consensus 148 ~d-~~d-----~~~--~-~lfGDgA~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (325)
T Consensus 144 FRYPTEyG~Qkp~tAq~TVT---GAGA~~l~~~~~--~~~it~a---T~G------kV~D~G~~dP~~mG~A-------- 201 (331)
T TIGR02845 144 FRYPTEYGVQKPPTAQWTVT---GAGAVLLASTGG--GPRITSA---TIG------KVVDLGLTDPLDMGAA-------- 201 (331)
T ss_pred CCCCCCCCCCCCCCCCCCEE---HHHEEEECCCCC--CCEEEEE---EEE------EEEECCCCCCCCHHHH--------
T ss_conf 25651256115998861250---346486544789--4364145---301------4771233686411354--------
Q ss_pred CHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECC---CCCHHHHHHHHHC-CCCHHHHHHHHHHC------------
Q ss_conf 1454343201003678988997401200122463056---5413899999971-97865700218540------------
Q gi|254780489|r 219 GADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQ---ANSRIIQKVCEKI-GLSKRIMVNSLKDF------------ 282 (325)
Q Consensus 219 g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq---~~~~~~~~~~~~l-gi~~~~~~~~l~~~------------ 282 (325)
T Consensus 202 -------MAPAAaDTI~~Hf~dtg~~~~DYDLIvTGDL~rvG~~I~~~LL~e~yg~~~~~---~Y~DCG~~IY~~dqqdV 271 (331)
T TIGR02845 202 -------MAPAAADTIEAHFKDTGRSVDDYDLIVTGDLARVGSEILRKLLKEEYGYDVTE---KYDDCGVMIYRPDQQDV 271 (331)
T ss_pred -------HHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCC---EECCCCEEEECCCCCCC
T ss_conf -------12689999999998707880401367873300214899999988860875000---10456467533887810
Q ss_pred -----CCCCCCHHHHH-HHHHHHHCCCCCCCEEEEEEECCCCC
Q ss_conf -----93300059999-99999806789998999998615510
Q gi|254780489|r 283 -----GNSSSASIPLS-LSLENQRKPFQKGEKILTISCRRGND 319 (325)
Q Consensus 283 -----GN~~sAsi~~~-L~~~~~~g~i~~Gd~vll~~~G~G~s 319 (325)
T Consensus 272 ~AGGSG~ACSAvV~yGyll~~l~~G~l~---k~LvvaTGALLS 311 (331)
T TIGR02845 272 FAGGSGCACSAVVTYGYLLKELKRGKLK---KVLVVATGALLS 311 (331)
T ss_pred CCCCCCCCHHHEEHHHHHHHHHHCCCCE---EEEEEECCHHHH
T ss_conf 5778566503321137899998369712---788885103322