HHsearch alignment for GI: 254780489 and conserved domain: TIGR02845

>TIGR02845 spore_V_AD stage V sporulation protein AD; InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation ..
Probab=99.58  E-value=1.4e-14  Score=115.09  Aligned_cols=259  Identities=21%  Similarity=0.301  Sum_probs=167.1

Q ss_pred             CCCEEEEEEEEECCCC----CCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHH-----HHHHHHHHHHCCCCC
Q ss_conf             6620999999735886----1388899988099976831114750889948988799999-----999999864301322
Q gi|254780489|r    3 KSSSCILGFGHAVPNQ----CIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIA-----IQAGDIALRNANIKK   73 (325)
Q Consensus         3 ~~~~~I~g~g~~lP~~----~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la-----~~Aa~~aL~~a~~~~   73 (325)
T Consensus         7 ~~pp~I~s~gt~vGP~Eg~GPL~~-----~FD~----~~~d-----l-~--~ge~SwEkAEr~lm~~Av~~aL~Ka~l~~   69 (331)
T TIGR02845         7 ENPPVIVSAGTAVGPKEGEGPLGD-----YFDK----IYDD-----L-Y--CGEDSWEKAERKLMEDAVNLALKKANLKK   69 (331)
T ss_pred             CCCCEEEEEEEEEECCCCCCCCCC-----CCCC----EECC-----C-C--CCCCCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             488789986578506347896862-----1252----2014-----4-3--57201899999999999999875358712


Q ss_pred             C--CCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCC---CC
Q ss_conf             2--3442588431002368874322112100238633342101231012567657887438-8505886201224---44
Q gi|254780489|r   74 D--SISLTLLATSTPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSH-QKPVLIIAANLLS---RR  147 (325)
Q Consensus        74 ~--dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S---~~  147 (325)
T Consensus        70 ~PP~vD~~L-AGDLLNQ~~--~anFvAR~L~iPf---lGLygACsTs~E~L~~gA~lv~GGfAd~vLaAtSSHy~taERQ  143 (331)
T TIGR02845        70 DPPDVDFFL-AGDLLNQII--TANFVARELGIPF---LGLYGACSTSMETLALGAMLVDGGFADRVLAATSSHYATAERQ  143 (331)
T ss_pred             CCCCEEEEE-HHHHHHHHH--HHHHHHHHCCCCC---EECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHH
T ss_conf             787211120-103666789--9989887458882---3402135789999999999983200221111211113532210


Q ss_pred             CC-CCC-----CCC--C-CCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf             46-222-----443--4-32544200112205765444531135532136776527830698667654455655232245
Q gi|254780489|r  148 IN-LED-----KDT--A-IIFGDAAGAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITN  218 (325)
Q Consensus       148 ~d-~~d-----~~~--~-~lfGDgA~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (325)
T Consensus       144 FRYPTEyG~Qkp~tAq~TVT---GAGA~~l~~~~~--~~~it~a---T~G------kV~D~G~~dP~~mG~A--------  201 (331)
T TIGR02845       144 FRYPTEYGVQKPPTAQWTVT---GAGAVLLASTGG--GPRITSA---TIG------KVVDLGLTDPLDMGAA--------  201 (331)
T ss_pred             CCCCCCCCCCCCCCCCCCEE---HHHEEEECCCCC--CCEEEEE---EEE------EEEECCCCCCCCHHHH--------
T ss_conf             25651256115998861250---346486544789--4364145---301------4771233686411354--------


Q ss_pred             CHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECC---CCCHHHHHHHHHC-CCCHHHHHHHHHHC------------
Q ss_conf             1454343201003678988997401200122463056---5413899999971-97865700218540------------
Q gi|254780489|r  219 GADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQ---ANSRIIQKVCEKI-GLSKRIMVNSLKDF------------  282 (325)
Q Consensus       219 g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq---~~~~~~~~~~~~l-gi~~~~~~~~l~~~------------  282 (325)
T Consensus       202 -------MAPAAaDTI~~Hf~dtg~~~~DYDLIvTGDL~rvG~~I~~~LL~e~yg~~~~~---~Y~DCG~~IY~~dqqdV  271 (331)
T TIGR02845       202 -------MAPAAADTIEAHFKDTGRSVDDYDLIVTGDLARVGSEILRKLLKEEYGYDVTE---KYDDCGVMIYRPDQQDV  271 (331)
T ss_pred             -------HHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCC---EECCCCEEEECCCCCCC
T ss_conf             -------12689999999998707880401367873300214899999988860875000---10456467533887810


Q ss_pred             -----CCCCCCHHHHH-HHHHHHHCCCCCCCEEEEEEECCCCC
Q ss_conf             -----93300059999-99999806789998999998615510
Q gi|254780489|r  283 -----GNSSSASIPLS-LSLENQRKPFQKGEKILTISCRRGND  319 (325)
Q Consensus       283 -----GN~~sAsi~~~-L~~~~~~g~i~~Gd~vll~~~G~G~s  319 (325)
T Consensus       272 ~AGGSG~ACSAvV~yGyll~~l~~G~l~---k~LvvaTGALLS  311 (331)
T TIGR02845       272 FAGGSGCACSAVVTYGYLLKELKRGKLK---KVLVVATGALLS  311 (331)
T ss_pred             CCCCCCCCHHHEEHHHHHHHHHHCCCCE---EEEEEECCHHHH
T ss_conf             5778566503321137899998369712---788885103322