HHsearch alignment for GI: 254780489 and conserved domain: cd00826
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.54 E-value=2.1e-13 Score=107.50 Aligned_cols=96 Identities=17% Similarity=0.128 Sum_probs=78.1
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 8879999999999986430132223442588431002368874322112-100238633342101231012567657887
Q gi|254780489|r 51 HETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITH-RLGLMQSGAIDLTGACAGFLYALVMADSYI 129 (325)
Q Consensus 51 ~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~-~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i 129 (325)
T Consensus 20 ~~~a~eL~~~ai~~al~~agi~~~~Id~vi~G~~~~~g~g~n~ar~~~l~ag~~~~vp~~tV~~~CaSG~~Ai~~A~~~I 99 (393)
T cd00826 20 NDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQEAPAIGMNNLCGSGLRALALAMQLI 99 (393)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 89999999999999999829698998989999258755554199999997599989976887684789999999999999
Q ss_pred HCC-CCEEEEEEECCCCC
Q ss_conf 438-85058862012244
Q gi|254780489|r 130 NSH-QKPVLIIAANLLSR 146 (325)
Q Consensus 130 ~~g-~~~vLVv~~e~~S~ 146 (325)
T Consensus 100 ~sG~~dvvlagGvEsms~ 117 (393)
T cd00826 100 AGGDANCILAGGFEKMET 117 (393)
T ss_pred HCCCCCEEEEEEEEECCC
T ss_conf 769999899950550676