HHsearch alignment for GI: 254780489 and conserved domain: cd00830
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=0 Score=545.95 Aligned_cols=319 Identities=40% Similarity=0.633 Sum_probs=306.9
Q ss_pred CEEEEEEEEECCCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
Q ss_conf 20999999735886138889998809997683111475088994898879999999999986430132223442588431
Q gi|254780489|r 5 SSCILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALRNANIKKDSISLTLLATS 84 (325)
Q Consensus 5 ~~~I~g~g~~lP~~~i~n~~l~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~ 84 (325)
T Consensus 1 ~~~I~~~g~y~P~~~v~n~~~~~~~g~~~~~i~~~~Gi~~R~~a~~~e~~~~ma~~Aa~~aL~~ag~~~~dIdlli~~s~ 80 (320)
T cd00830 1 NARILGIGSYLPERVVTNDELEKRLDTSDEWIRTRTGIRERRIADPGETTSDLAVEAAKKALEDAGIDADDIDLIIVATS 80 (320)
T ss_pred CCEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
T ss_conf 97899999977993784999998869898999870297489988999999999999999999866989567888999415
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCEEEEEEECCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 002368874322112100238633342101231012567657887438-8505886201224444622244343254420
Q gi|254780489|r 85 TPDHLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSYINSH-QKPVLIIAANLLSRRINLEDKDTAIIFGDAA 163 (325)
Q Consensus 85 t~d~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~i~~g-~~~vLVv~~e~~S~~~d~~d~~~~~lfGDgA 163 (325)
T Consensus 81 ~~~~~~P~~a~~v~~~LGl~~~~~fdi~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~e~~s~~~~~~~~~~~~lfGDga 160 (320)
T cd00830 81 TPDYLFPATACLVQARLGAKNAAAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRILDWTDRSTAVLFGDGA 160 (320)
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHCCCCCCCCCCHHHCCCCCC
T ss_conf 68986883999999996889972251045511589999999999855987616998413422554546621111037863
Q ss_pred EEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCC
Q ss_conf 01122057654445311355321367765278306986676544556552322451454343201003678988997401
Q gi|254780489|r 164 GAVVLAPSPLKDKSGILGIELTSDGSKYDLIKIPTGGSTSPAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDL 243 (325)
Q Consensus 164 ~A~il~~~~~~~~~~il~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl 243 (325)
T Consensus 161 aA~ll~~~~~--~~~i~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~ 238 (320)
T cd00830 161 GAVVLEATEE--DPGILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGL 238 (320)
T ss_pred EEEEEEECCC--CCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 4899962488--88424689997068865268458976677643335676179732899998876569999999998599
Q ss_pred CCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC
Q ss_conf 20012246305654138999999719786570021854093300059999999998067899989999986155102010
Q gi|254780489|r 244 QPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNSLKDFGNSSSASIPLSLSLENQRKPFQKGEKILTISCRRGNDRGIY 323 (325)
Q Consensus 244 ~~~did~~i~Hq~~~~~~~~~~~~lgi~~~~~~~~l~~~GN~~sAsi~~~L~~~~~~g~i~~Gd~vll~~~G~G~s~ga~ 323 (325)
T Consensus 239 ~~~did~~v~Hq~~~~~~~~~~~~lgi~~~k~~~~~~~~GN~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~g~~ 318 (320)
T cd00830 239 TPDDIDWFVPHQANLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAA 318 (320)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHH
T ss_conf 91016579970687899999999809698996756851075587689999999997499998599999998045325320
Q ss_pred CC
Q ss_conf 19
Q gi|254780489|r 324 CL 325 (325)
Q Consensus 324 lL 325 (325)
T Consensus 319 ~l 320 (320)
T cd00830 319 LL 320 (320)
T ss_pred HC
T ss_conf 29