HHsearch alignment for GI: 254780489 and conserved domain: pfam08392
>pfam08392 FAE1_CUT1_RppA FAE1/Type III polyketide synthase-like protein. The members of this family are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region featured in this family contains the active site residues, as well as motifs involved in substrate binding.
Probab=99.77 E-value=6.3e-18 Score=137.03 Aligned_cols=171 Identities=14% Similarity=0.275 Sum_probs=131.6
Q ss_pred CCCEEEEEEEEECCC--CCCCHHHHHHHHCC----CH------HHEEECCCCCEEEEECC-------CCCH-------HH
Q ss_conf 662099999973588--61388899988099----97------68311147508899489-------8879-------99
Q gi|254780489|r 3 KSSSCILGFGHAVPN--QCIHNSIIERHLNL----KL------GVIEQKTGIKYRYWAEK-------HETL-------TD 56 (325)
Q Consensus 3 ~~~~~I~g~g~~lP~--~~i~n~~l~~~~~~----~~------~~i~~~tGI~~R~~~~~-------~e~~-------~~ 56 (325)
T Consensus 6 ~r~vYLvDfaC~kp~~~~kv~~~~~~e~~~~~~~f~~~s~~F~~kil~rSGlG~eTy~P~~~~~~p~~~s~~~ar~Eae~ 85 (290)
T pfam08392 6 PRPVYLVDYACYKPPDDRKVSTETFMEHIRRNGKFDEESLDFQRKILERSGLGEETYVPRSVLEIPPNPTMAEAREEAEE 85 (290)
T ss_pred CCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHH
T ss_conf 99889985532079720316999999999865899868999999999964899988578254258999879999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCC-CCCCCCHHHHHHHHHHHHCCC-
Q ss_conf 999999998643013222344258843100236887432211210023-86333421-012310125676578874388-
Q gi|254780489|r 57 IAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLT-GACAGFLYALVMADSYINSHQ- 133 (325)
Q Consensus 57 la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~-~~C~g~l~aL~~A~~~i~~g~- 133 (325)
T Consensus 86 v~f~avd~Lf~ktgv~P~dIdiLVvNcS-lf~PtPSLsamivNrykmR~di~s~nLsGMGCSAglIsIdLAk~lL~~~~n 164 (290)
T pfam08392 86 VMFGAVDELFAKTGVRPRDIGILVVNCS-LFNPTPSLSAMIVNRYKMRGDIKSYNLSGMGCSAGLISIDLAKDLLQVHPN 164 (290)
T ss_pred HHHHHHHHHHHHCCCCHHHCCEEEEECC-CCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 9999999999973998768999999677-888885289999886068643006336676511347579999999984899
Q ss_pred CEEEEEEECCCCCCC-CCCCCC---CCCCCCCCEEEEEECCCCCC
Q ss_conf 505886201224444-622244---34325442001122057654
Q gi|254780489|r 134 KPVLIIAANLLSRRI-NLEDKD---TAIIFGDAAGAVVLAPSPLK 174 (325)
Q Consensus 134 ~~vLVv~~e~~S~~~-d~~d~~---~~~lfGDgA~A~il~~~~~~ 174 (325)
T Consensus 165 s~ALVvSTE~it~n~Y~G~~rsmLl~NcLFR~GgAAiLLSN~~~~ 209 (290)
T pfam08392 165 TYALVVSTENITPNWYAGNDRSMLLPNCLFRMGGAAILLSNKPAD 209 (290)
T ss_pred CEEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCC
T ss_conf 659999853045445358736650140113577147983058443