HHsearch alignment for GI: 254780489 and conserved domain: pfam08392

>pfam08392 FAE1_CUT1_RppA FAE1/Type III polyketide synthase-like protein. The members of this family are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region featured in this family contains the active site residues, as well as motifs involved in substrate binding.
Probab=99.77  E-value=6.3e-18  Score=137.03  Aligned_cols=171  Identities=14%  Similarity=0.275  Sum_probs=131.6

Q ss_pred             CCCEEEEEEEEECCC--CCCCHHHHHHHHCC----CH------HHEEECCCCCEEEEECC-------CCCH-------HH
Q ss_conf             662099999973588--61388899988099----97------68311147508899489-------8879-------99
Q gi|254780489|r    3 KSSSCILGFGHAVPN--QCIHNSIIERHLNL----KL------GVIEQKTGIKYRYWAEK-------HETL-------TD   56 (325)
Q Consensus         3 ~~~~~I~g~g~~lP~--~~i~n~~l~~~~~~----~~------~~i~~~tGI~~R~~~~~-------~e~~-------~~   56 (325)
T Consensus         6 ~r~vYLvDfaC~kp~~~~kv~~~~~~e~~~~~~~f~~~s~~F~~kil~rSGlG~eTy~P~~~~~~p~~~s~~~ar~Eae~   85 (290)
T pfam08392         6 PRPVYLVDYACYKPPDDRKVSTETFMEHIRRNGKFDEESLDFQRKILERSGLGEETYVPRSVLEIPPNPTMAEAREEAEE   85 (290)
T ss_pred             CCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHH
T ss_conf             99889985532079720316999999999865899868999999999964899988578254258999879999999999


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCCCC-CCCCCCHHHHHHHHHHHHCCC-
Q ss_conf             999999998643013222344258843100236887432211210023-86333421-012310125676578874388-
Q gi|254780489|r   57 IAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLM-QSGAIDLT-GACAGFLYALVMADSYINSHQ-  133 (325)
Q Consensus        57 la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~~a~~v~~~Lg~~-~~~~~di~-~~C~g~l~aL~~A~~~i~~g~-  133 (325)
T Consensus        86 v~f~avd~Lf~ktgv~P~dIdiLVvNcS-lf~PtPSLsamivNrykmR~di~s~nLsGMGCSAglIsIdLAk~lL~~~~n  164 (290)
T pfam08392        86 VMFGAVDELFAKTGVRPRDIGILVVNCS-LFNPTPSLSAMIVNRYKMRGDIKSYNLSGMGCSAGLISIDLAKDLLQVHPN  164 (290)
T ss_pred             HHHHHHHHHHHHCCCCHHHCCEEEEECC-CCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf             9999999999973998768999999677-888885289999886068643006336676511347579999999984899


Q ss_pred             CEEEEEEECCCCCCC-CCCCCC---CCCCCCCCEEEEEECCCCCC
Q ss_conf             505886201224444-622244---34325442001122057654
Q gi|254780489|r  134 KPVLIIAANLLSRRI-NLEDKD---TAIIFGDAAGAVVLAPSPLK  174 (325)
Q Consensus       134 ~~vLVv~~e~~S~~~-d~~d~~---~~~lfGDgA~A~il~~~~~~  174 (325)
T Consensus       165 s~ALVvSTE~it~n~Y~G~~rsmLl~NcLFR~GgAAiLLSN~~~~  209 (290)
T pfam08392       165 TYALVVSTENITPNWYAGNDRSMLLPNCLFRMGGAAILLSNKPAD  209 (290)
T ss_pred             CEEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCC
T ss_conf             659999853045445358736650140113577147983058443