RPSBLAST alignment for GI: 254780489 and conserved domain: TIGR00748

>gnl|CDD|129831 TIGR00748, HMG_CoA_syn_Arc, hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. Length = 345

 Score = 41.8 bits (98), Expect = 2e-04
 Identities = 67/323 (20%), Positives = 115/323 (35%), Gaps = 50/323 (15%)

Query: 8   ILGFGHAVPNQCIHNSIIERHLNLKLGVIEQKTGIKYRYWAEKHETLTDIAIQAGDIALR 67
           I+G+G  +P   I    I R        I     ++ +      E    I ++A   AL+
Sbjct: 4   IVGYGAYIPMYRIKVEEIARVWGKDPESISNGLPVEEKAVPGLDEDTATIGVEAARNALK 63

Query: 68  NANIKKDSISLTLLATSTPDHLLPPSSPLITHRLGLMQS-GAIDLTGACAGFLYALVMAD 126
            A I    I    + + +  + + P++ ++   +G      A DL  AC      +    
Sbjct: 64  RAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLEFACKAGTAGIQACM 123

Query: 127 SYINSHQ-KPVLIIAANLLSRRINLEDKDTAIIFGDAAGAVVLAPSPLKDKSGILGIELT 185
             + S   K  L I A+             A+ +   AG    A   + +K+ +   E T
Sbjct: 124 GLVASGMIKYGLAIGADTAQGA-----PGDALEYTAGAGG---AAYIIGEKNTVAYFEGT 175

Query: 186 SDGSKYDLIKIPTGGSTSPAGTNTHDFYMR-----------ITNGADIFYNAVKIMAQSA 234
                Y               T+T DF+ R            T     F++ V     +A
Sbjct: 176 -----YSYT------------TDTPDFWRREGEPYPRHGGRFTGEPAYFHHVV----TAA 214

Query: 235 KQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKRIMVNSLKD--FGNSSSASIPL 292
           K  + K  L P+D +  + HQ N +        +G  K  +   L     GN+ S + P+
Sbjct: 215 KGLMEKLGLTPEDFDYAVFHQPNGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPV 274

Query: 293 SLS--LENQRKPFQKGEKILTIS 313
            LS  L+      + G++IL +S
Sbjct: 275 GLSAVLDIA----EPGDRILAVS 293