HHsearch alignment for GI: 254780490 and conserved domain: COG4973

>COG4973 XerC Site-specific recombinase XerC [DNA replication, recombination, and repair].
Probab=99.87  E-value=1.1e-22  Score=137.56  Aligned_cols=62  Identities=50%  Similarity=0.888  Sum_probs=60.1

Q ss_pred             CCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCHHHHHH
Q ss_conf             21603638999999998089999999984888889999998639999999999958211333
Q gi|254780490|r    2 STTAHTLRHSFATHLLSNGGDLRSIQSILGHSRLSTTQIYTNVNSKRMMEIYDQTHPSITQK   63 (67)
Q Consensus         2 ~~tpH~lRHt~at~l~~~G~~~~~vq~lLGH~~i~tT~~Y~~~~~~~~~~~~~~~~p~~~~k   63 (67)
T Consensus       238 HvhPH~LRHSFAtHmLesSgDLRaVQELLGHanlsTTQIYThLDFQHLA~vYD~AHPRAkrk  299 (299)
T COG4973         238 HVHPHKLRHSFATHMLESSGDLRAVQELLGHANLSTTQIYTHLDFQHLASVYDAAHPRAKRK  299 (299)
T ss_pred             CCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCC
T ss_conf             38768777788999987035489999985646512444323236899999986317411269