HHsearch alignment for GI: 254780490 and conserved domain: PRK00283
>PRK00283 xerD site-specific tyrosine recombinase XerD; Reviewed.
Probab=99.88 E-value=3.8e-23 Score=139.96 Aligned_cols=59 Identities=54% Similarity=0.882 Sum_probs=57.5
Q ss_pred CCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCHHH
Q ss_conf 21603638999999998089999999984888889999998639999999999958211
Q gi|254780490|r 2 STTAHTLRHSFATHLLSNGGDLRSIQSILGHSRLSTTQIYTNVNSKRMMEIYDQTHPSI 60 (67)
Q Consensus 2 ~~tpH~lRHt~at~l~~~G~~~~~vq~lLGH~~i~tT~~Y~~~~~~~~~~~~~~~~p~~ 60 (67)
T Consensus 238 ~~tpH~lRHt~at~ll~~G~~l~~i~~~LGHssi~TT~~Y~h~~~~~l~~~~~~~~p~~ 296 (296)
T PRK00283 238 KLSPHVLRHAFATHLLNHGADLRVVQELLGHSDISTTQIYTHVATERLKELHAQHHPRA 296 (296)
T ss_pred CCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCC
T ss_conf 88998787999999998798999999882899889999988689999999999868499