HHsearch alignment for GI: 254780490 and conserved domain: cd01192
>cd01192 INT_P22_C P22-like integrases, site-specific recombinases, DNA breaking-rejoining enzymes, C-terminal catalytic domain. This CD includes various bacterial and phage integrases, including those similar to phage P22-like integrases, DLP12 and APSE-1.
Probab=99.75 E-value=2e-18 Score=115.60 Aligned_cols=58 Identities=26% Similarity=0.418 Sum_probs=55.0
Q ss_pred CCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCHH
Q ss_conf 2160363899999999808999999998488888999999863999999999995821
Q gi|254780490|r 2 STTAHTLRHSFATHLLSNGGDLRSIQSILGHSRLSTTQIYTNVNSKRMMEIYDQTHPS 59 (67)
Q Consensus 2 ~~tpH~lRHt~at~l~~~G~~~~~vq~lLGH~~i~tT~~Y~~~~~~~~~~~~~~~~p~ 59 (67)
T Consensus 119 ~~~~H~lRHt~at~l~~~G~~~~~i~~~lGH~~~~~T~~Y~h~~~~~~r~a~~~l~~~ 176 (177)
T cd01192 119 DFRWHDLRHTWASWLVQSGVPLYVLQELLGHSSLQMVRRYAHLSPEHLRAAARALDAF 176 (177)
T ss_pred CCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 9986889688999999969899999999589989999998866999999999998734