HHsearch alignment for GI: 254780490 and conserved domain: cd01194

>cd01194 INT_Tn554A_C Tn544A and related transposases, DNA breaking-rejoining enzymes, integrase/recombinases, C-terminal catalytic domain. This CD includes various bacterial transposases similar to TnpA from transposon Tn554.

Probab=99.81  E-value=3.2e-20  Score=124.89  Aligned_cols=55  Identities=25%  Similarity=0.518  Sum_probs=52.1

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHH-HHHHHCCHHHHHHHHHH
Q ss_conf             92160363899999999808999999998488888999-99986399999999999
Q gi|254780490|r    1 MSTTAHTLRHSFATHLLSNGGDLRSIQSILGHSRLSTT-QIYTNVNSKRMMEIYDQ   55 (67)
Q Consensus         1 ~~~tpH~lRHt~at~l~~~G~~~~~vq~lLGH~~i~tT-~~Y~~~~~~~~~~~~~~   55 (67)
T Consensus       131 ~~~~~H~lRHT~at~l~~~G~~~~~v~~~lGH~~~~tT~~~Y~h~~~e~~~~~~~k  186 (186)
T cd01194         131 IDFTPHMFRHTHATELIRAGWSIEVVADRLGHAHVQTTLNTYGHLSEEDIRREFNK  186 (186)
T ss_pred             CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCC
T ss_conf             98774575999999999879999999998289987999998456899999998658