HHsearch alignment for GI: 254780490 and conserved domain: cd01195
>cd01195 INT_Tn544B_C Tn544B and related transposases, DNA breaking-rejoining enzymes, integrase/recombinases, catalytic domain. This CD includes various bacterial transposases similar to TnpB from transposon Tn554.
Probab=99.81 E-value=2e-20 Score=125.96 Aligned_cols=52 Identities=29% Similarity=0.502 Sum_probs=50.2
Q ss_pred CCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHH
Q ss_conf 2160363899999999808999999998488888999999863999999999
Q gi|254780490|r 2 STTAHTLRHSFATHLLSNGGDLRSIQSILGHSRLSTTQIYTNVNSKRMMEIY 53 (67)
Q Consensus 2 ~~tpH~lRHt~at~l~~~G~~~~~vq~lLGH~~i~tT~~Y~~~~~~~~~~~~ 53 (67)
T Consensus 144 ~~~~H~lRHT~aT~L~~~Gv~i~~Iq~~LGH~s~~tT~~Yahv~~e~l~~~~ 195 (195)
T cd01195 144 HFHAHAFRHTVATRMINNGMPIHIIQKFLGHESPEMTSRYAHIFDETLKNEF 195 (195)
T ss_pred CCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHC
T ss_conf 6688877489999999869999999999489998999998857989998629