HHsearch results for GI: 254780490 and protein with PDBid: 3nkh_A
>3nkh_A Integrase; alpha-fold, MRSA protein, structural genomics, PSI-2, protei structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=99.53 E-value=6.3e-15 Score=96.52 Aligned_cols=57 Identities=30% Similarity=0.470 Sum_probs=52.8
Q ss_pred CCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHH-HHHHHCCHHHHHHHHHHHCH
Q ss_conf 2160363899999999808999999998488888999-99986399999999999582
Q gi|254780490|r 2 STTAHTLRHSFATHLLSNGGDLRSIQSILGHSRLSTT-QIYTNVNSKRMMEIYDQTHP 58 (67)
Q Consensus 2 ~~tpH~lRHt~at~l~~~G~~~~~vq~lLGH~~i~tT-~~Y~~~~~~~~~~~~~~~~p 58 (67)
+++||+|||||||.++++|+|+..||.+|||+|+++| .+|++++++..+++++++..
T Consensus 183 ~~~~H~lRht~at~l~~~g~~~~~i~~~lGH~s~~~t~~~Y~~~~~~~~~~~~~ki~~ 240 (244)
T 3nkh_A 183 EVSSHILRHSHISLLSQQGVSLKAIMDRVGHSDHRTTLSIYSHVTEQMDKDMMNKLEQ 240 (244)
T ss_dssp CCSHHHHHHHHHHHHHHTTCCHHHHHHHHCSTTHHHHHHHHHHHHHHHHHTHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 4676334899999999869999999998389988999998446799999999999887