HHsearch alignment for GI: 254780493 and conserved domain: KOG2835

Probab=98.96  E-value=6.4e-11  Score=89.53  Aligned_cols=142  Identities=23%  Similarity=0.261  Sum_probs=109.0

Q ss_pred             CEEEECCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHH
Q ss_conf             00000254650578852122443220012210247651344663212223568874022321033334577755554566
Q gi|254780493|r   84 LVGQQLQMFPIELIVRGYLAGNTKTSLLTFYKNGKRKIYEYLLPDNMSDNQKLPYPVITPTTKSSESASGCDQPISPNEI  163 (323)
Q Consensus        84 ~~v~k~~~iPiE~VvR~y~~GS~~~~~~~~~k~~~~~~~g~~lp~gl~~~~~l~~Pi~tpstK~~~~~~~~D~~i~~~~~  163 (323)
T Consensus        88 ~~~~p~~~~~~~~v~~~~~ts~f~k~~~--------~vp---------~~~~~~~~~~~S~~k~~---a~~~n~~g~e~~  147 (373)
T KOG2835          88 FEARPCPMTPIEWVTRRCATSSFEKKNP--------GVP---------EGYRFRGYKTESTFKDD---ANMDNVWGDEQI  147 (373)
T ss_pred             HHCCCCCCCCCEEEEEECCHHHHHHHCC--------CCC---------CCEEECCCCCCCCCCCH---HHCCCCCCHHHH
T ss_conf             4227887787304786222366887586--------676---------54153476565200221---223763330134


Q ss_pred             HHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECC-CCCEEEE-CCCCCCCCCHHHCCCHHHHHHH
Q ss_conf             653--04998999899999999999999998867978874232445508-8625762-0004810000000000012331
Q gi|254780493|r  164 IHR--GILTRNQWETISSYALSLFERGCKLALENGLILVDSKYEFGIDK-KQNIILA-DEIHTPDSSRYWEVETYEKSFR  239 (323)
Q Consensus       164 ~~~--~~~~~~~~~~i~~~sl~i~~~~~~~~~~~GliLvD~K~EFG~~~-~g~iiL~-DEv~TPDssR~W~~~~ye~~~~  239 (323)
T Consensus       148 ~~~~~~li~r~~~~~~~~~~~~ifes~k~~~~~h~~~I~d~~ie~gv~~~~~~~~~a~~v~-~~~~~r~~~~--------  218 (373)
T KOG2835         148 IDCAGLLIGRDEVKIMQKLPLYIFESLKAAWAGHNCAISDMKIEFGVDVTLGEIVLASDVI-DNDSWRMWPD--------  218 (373)
T ss_pred             HHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHCCC-CHHHEEEEEC--------
T ss_conf             4444333010114410004400010234542477653564234440334365555531035-3123477006--------


Q ss_pred             CCCCCCCCCHHHHHHH
Q ss_conf             2544443237888765
Q gi|254780493|r  240 EGITPIGLDKDFIRNW  255 (323)
Q Consensus       240 ~g~~~~s~DKq~~R~w  255 (323)
T Consensus       219 -~d~~im~D~~~~~d~  233 (373)
T KOG2835         219 -GDGRIMKDKKVYFDL  233 (373)
T ss_pred             -CCCCEEEEEEEEECC
T ss_conf             -776644300678456