RPSBLAST alignment of GI: 254780493 and protein with PDBid: 3kre
>3kre_A Phosphoribosylaminoimidazole-succinocarboxamide synthase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ATP-binding, ligase; 1.80A {Ehrlichia chaffeensis str} Length = 263
Score = 148 bits (375), Expect = 1e-36
Identities = 61/267 (22%), Positives = 109/267 (40%), Gaps = 44/267 (16%)
Query: 16 YSGKVRENYFLSD-GTRITIATDRLSAFD-QNIACIPYKGEVLNQITQYWFHHTSDI-CS 72
Y GK + + + I D ++AF+ + A I KG + N I+ + D
Sbjct: 29 YEGKAKIIFATLNPLEVIQHFKDEITAFNNKKAAIIHEKGILNNYISSFLMKKLIDKGIK 88
Query: 73 NHTLDYPDPNVLVGQQLQMFPIELIVRGYLAGNTKTSLLTFYKNGKRKIYEYLLPDNMSD 132
H + + + +++ + PIE+++R AGN ++ ++ + +
Sbjct: 89 THFISLLNQREQLVKKITIIPIEVVIRNLAAGNF----SKRFQIADGTPFKSPIIEFYYK 144
Query: 133 NQKLPYPVITPTTKSSESASGCDQPISPNEIIHRGILTRNQWETISSYALSLFERGCKLA 192
N +L D +S I+ LT + E I +L + +L
Sbjct: 145 NDELS-----------------DPMVSEGHILSFQWLTNQELEKIKILSLKINNILSELF 187
Query: 193 LENGLILVDSKYEFGI---DKKQNIILADEIHTPDSSRYWEVETYEKSFREGITPIGLDK 249
G+ LVD K EFG D++ ++ LADEI +PD+ R W++ T ++ LDK
Sbjct: 188 FNVGIKLVDFKLEFGKLHNDEQSDLFLADEI-SPDTCRLWDISTNKR----------LDK 236
Query: 250 DFIRNWILTRCNPYRD------NIPDI 270
D R + YR+ IP++
Sbjct: 237 DRYRLNLGNVIEGYREVAHKLNAIPNL 263