HHsearch alignment for GI: 254780494 and conserved domain: TIGR01297
>TIGR01297 CDF cation diffusion facilitator family transporter; InterPro: IPR002524 Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt. These proteins are considered to be efflux pumps that remove these ions from cells , , however others are implicated in ion uptake . The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.; GO: 0008324 cation transmembrane transporter activity, 0006812 cation transport, 0016020 membrane.
Probab=100.00 E-value=7.6e-35 Score=233.38 Aligned_cols=277 Identities=19% Similarity=0.260 Sum_probs=250.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHH
Q ss_conf 89999999999999999999999983799999999999999999999999999820000120378964375204568999
Q gi|254780494|r 12 ESLLKLSICMTIFMASVNLIIGTITNSSSIVFDGFYSYLEAGMTALSLLVAKLIARDVSKVDYRERERYFQFGFWHFEPM 91 (314)
Q Consensus 12 ~~~L~~sl~~~~~~a~~~~~~g~~sgS~allada~~sl~D~~~~~~~l~~~~~~~~~~~~~~~k~~~~~~p~G~~r~E~l 91 (314)
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~g~~~~s~~~~~d~~h~~~d~~~~~~~~~~~~~--------~~~~~~~~~~~G~~~~e~~ 73 (294)
T TIGR01297 2 KRALLISLLLNLLLLLVELVGGLLSGSLALLADALHSLSDVLALLIALLALRL--------SEKPPDERHPFGYGRAEVL 73 (294)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HCCCCCCCCCCCHHHHHHH
T ss_conf 31688899999999999999998730478888777889999999999999987--------4157755566532689999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH--HCCCC--CHHHHHHHHHH
Q ss_conf 99999999999999999999998514---7987651179999999999866889987641--03577--79999999875
Q gi|254780494|r 92 VLAFNSVILICVALYEFLISILNIIS---GGHDINFEKAVIYSCVASFICLMMGVYENRC--NREIK--SDFIALDAKSW 164 (314)
Q Consensus 92 ~~l~~~~~l~~~~~~i~~~si~~l~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~--~~~~~--s~~l~~~~~~~ 164 (314)
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 151 (294)
T TIGR01297 74 AALLNGLFLVVVALFILYEAIERLLNGHAPE-EIDG-LALIVAGLGLLVNLILALLLLRGHGGHKLGHGSLNLRAAALHV 151 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 9999999999999999999999875002441-1357-8999999999999999999986420221100147899999998
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH-HHH-HHHHHHHH
Q ss_conf 78874213579999999983--013444204679989999999999998899999999999530997-899-99999997
Q gi|254780494|r 165 IVAGYLLLAVVIAFLCAMLL--RDSAYDWIIPYVDSMVLMFICLFILPSAICTMKSATFEIFQMTSP-DLD-SQVREALY 240 (314)
Q Consensus 165 ~~D~~~s~~v~i~~~~~~~~--~~~~~~~~~~~~D~i~alii~l~ii~~~~~~~~~~~~~Ll~~~~~-~~~-~~I~~~i~ 240 (314)
T Consensus 152 ~~d~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 224 (294)
T TIGR01297 152 LGDLLGSLGVLIGALLIYFGPFGWT-------WADPIAALLISLLILYTAFRLLKESINVLLDGAPPELLDLIEVKKVLL 224 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 8888999999999999874025503-------777899999999999989999999999985103530356999999997
Q ss_pred -HCCCCCCCEEEEEEEEEECC-EEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC-C-EEEEEEEECCC
Q ss_conf -15761151000167870467-69999999988899861099999999999999865489-2-19999985476
Q gi|254780494|r 241 -PIVIRHGFLDFYTYVTKVGR-SRIIEIYLIVPAHYPIKRIASLDAIRHEIGNAIGGLGE-E-RWLTISFTTQK 310 (314)
Q Consensus 241 -~~~~v~~v~~~~i~~~~~G~-~~~vev~i~v~~~~~~~~~~e~~~i~~~i~~~l~~~~~-~-~~~~i~F~~~~ 310 (314)
T Consensus 225 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (294)
T TIGR01297 225 LSIPGVKGVHDLHIW--RIGPGKLVLDVHVEVDPDL---DLKEAHDIALEIEREILKRHPFGIEHVTIHVEPLG 293 (294)
T ss_pred HHCCCCCCHHHHEEE--EECCCCEEEEEEEEECCCC---CHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
T ss_conf 515641110221023--2146725789888754643---25678999999999886405665316888740368