HHsearch alignment for GI: 254780494 and conserved domain: pfam01545
>pfam01545 Cation_efflux Cation efflux family. Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt. These proteins are thought to be efflux pumps that remove these ions from cells.
Probab=100.00 E-value=0 Score=327.20 Aligned_cols=267 Identities=23% Similarity=0.287 Sum_probs=241.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999837999999999999999999999999998200001203789643752045689999999999999999
Q gi|254780494|r 25 MASVNLIIGTITNSSSIVFDGFYSYLEAGMTALSLLVAKLIARDVSKVDYRERERYFQFGFWHFEPMVLAFNSVILICVA 104 (314)
Q Consensus 25 ~a~~~~~~g~~sgS~allada~~sl~D~~~~~~~l~~~~~~~~~~~~~~~k~~~~~~p~G~~r~E~l~~l~~~~~l~~~~ 104 (314)
T Consensus 2 l~~~~~~~~~~t~S~allada~~sl~D~~~~~~~l~~~~~~--------~k~~~~~~pfG~~r~E~l~~l~~~i~l~~~~ 73 (273)
T pfam01545 2 LALAKLAAGLLTGSLALLADALHSLIDLLSSLLALLALRLS--------SRPPDKRHPFGHGRLEVLAALIVSLLLLGVG 73 (273)
T ss_pred EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 24178899998523999999999999999999999999996--------5999777997088898999999999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999998514798765117999999999986688998764103577--79999999875788742135799999999
Q gi|254780494|r 105 LYEFLISILNIISGGHDINFEKAVIYSCVASFICLMMGVYENRCNREIK--SDFIALDAKSWIVAGYLLLAVVIAFLCAM 182 (314)
Q Consensus 105 ~~i~~~si~~l~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~--s~~l~~~~~~~~~D~~~s~~v~i~~~~~~ 182 (314)
T Consensus 74 ~~~~~~si~~l~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~l~a~~~~~~~D~~~s~~~~~~~~~~~ 152 (273)
T pfam01545 74 VFILYESIERLISPEEIEPPG-ILLLALISLVVNLLLALYLRRAGRKIGSKSPALRADALHALVDVLGSLAVLIGLLLIL 152 (273)
T ss_pred HHHHHHHHHHHHHCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999998266776137-8999999999999999999987551478998999999999999999989999999999
Q ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHCCCCCCCEEEEEEEEEECCE
Q ss_conf 83013444204679989999999999998899999999999530997-89999999997157611510001678704676
Q gi|254780494|r 183 LLRDSAYDWIIPYVDSMVLMFICLFILPSAICTMKSATFEIFQMTSP-DLDSQVREALYPIVIRHGFLDFYTYVTKVGRS 261 (314)
Q Consensus 183 ~~~~~~~~~~~~~~D~i~alii~l~ii~~~~~~~~~~~~~Ll~~~~~-~~~~~I~~~i~~~~~v~~v~~~~i~~~~~G~~ 261 (314)
T Consensus 153 ~~~~-------~~~D~i~~iii~~~ii~~~~~~~~~s~~~Ll~~~~~~~~~~~i~~~i~~~~~v~~v~~~~~~--~~G~~ 223 (273)
T pfam01545 153 LTGL-------YIADPLASLLIALLILYTGLRLLKESLSELLGASPDPELVDKIRKALEALPGVLGVHDLRVW--KSGPT 223 (273)
T ss_pred HCCC-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEE--EECCC
T ss_conf 7196-------77778999999999999999999999999967799867899999999638995034357999--96895
Q ss_pred EEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCE-EEEEEEECCCCC
Q ss_conf 999999998889986109999999999999986548921-999998547655
Q gi|254780494|r 262 RIIEIYLIVPAHYPIKRIASLDAIRHEIGNAIGGLGEER-WLTISFTTQKKW 312 (314)
Q Consensus 262 ~~vev~i~v~~~~~~~~~~e~~~i~~~i~~~l~~~~~~~-~~~i~F~~~~~~ 312 (314)
T Consensus 224 ~~v~v~i~v~~~~---~~~~~~~i~~~i~~~l~~~~~~i~~~~i~~~~~~~~ 272 (273)
T pfam01545 224 LLVEIHIEVDPDL---TVEEAHEIADEIEKALKEKFPGIVHVTIHVEPAPEV 272 (273)
T ss_pred EEEEEEEEECCCC---CHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
T ss_conf 9999999989999---899999999999999998689988699981599988