HHSEARCH alignment of GI: 254780494 and SCOP domain: d3bypa1

Alignment

Probab=99.19  E-value=1.8e-10  Score=80.43  Aligned_cols=78  Identities=15%  Similarity=0.146  Sum_probs=68.1

Q ss_pred             CCCHHHHHHHHHHHHHCCCCC--CCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             099789999999997157611--510001678704676999999998889986109999999999999986548921999
Q gi|254780494|r  226 MTSPDLDSQVREALYPIVIRH--GFLDFYTYVTKVGRSRIIEIYLIVPAHYPIKRIASLDAIRHEIGNAIGGLGEERWLT  303 (314)
Q Consensus       226 ~~~~~~~~~I~~~i~~~~~v~--~v~~~~i~~~~~G~~~~vev~i~v~~~~~~~~~~e~~~i~~~i~~~l~~~~~~~~~~  303 (314)
                      +.|||..++|++++++.+++.  ++|+  +|++++|+++++|+|+.||+++   ++.++|++.+++++++++.+|..+++
T Consensus         1 glp~e~~~~I~~~i~~~~~~~vv~vh~--lr~r~~G~~~~vd~hi~v~~~~---sv~~aH~i~~~ve~~i~~~~~~~~v~   75 (82)
T d3bypa1           1 GLPPEEVERIRAFLQERIRGRALEVHD--LKTRRAGPRSFLEFHLVVRGDT---PVEEAHRLCDELERALAQAFPGLQAT   75 (82)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTTCSEEEE--EEEEEETTEEEEEEEEEECTTC---BHHHHHHHHHHHHHHHHHHSTTEEEE
T ss_pred             CCCHHHHHHHHHHHHHCCCCCCEEEEE--EEEEEECCEEEEEEEEEECCCC---CHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf             929899999999999589978030168--8756988989999999989899---89999999999999999658997799


Q ss_pred             EEEEC
Q ss_conf             99854
Q gi|254780494|r  304 ISFTT  308 (314)
Q Consensus       304 i~F~~  308 (314)
                      +|.++
T Consensus        76 vHveP   80 (82)
T d3bypa1          76 IHVEP   80 (82)
T ss_dssp             EEEEE
T ss_pred             EEECC
T ss_conf             99588

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Cation efflux protein cytoplasmic domain-like
family: Cation efflux protein cytoplasmic domain-like
domain: Putative Zinc transporter CzrB
species: Thermus thermophilus [TaxId: 274]