HHsearch results for GI: 254780495 and protein with PDBid: 1coj_A

Probab=100.00  E-value=0  Score=424.30  Aligned_cols=194  Identities=28%  Similarity=0.470  Sum_probs=163.3

Q ss_pred             CCCCCCCCCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHCCHHH---HHHHHHHHHHH-HHCCCHHHHHHHHH
Q ss_conf             87799999986555864----699999998732887899889998500023---32004578976-41011145543322
Q gi|254780495|r    2 DFKLPNLPYSYDDLSPY----MSKETLEYHHDVHHKNYADNALKLASDAEM---LHLSLEEIIIK-SHGSNAGLFNNASQ   73 (205)
Q Consensus         2 ~~~Lp~Lpy~~~aLeP~----IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~---~~~~l~~~~~~-~~~~~~~~~nnagg   73 (205)
                      .|+|||++    +|+|.    ||++||++||+|||||||++||++++++..   .+.+....+.. ....+..+.+|+||
T Consensus         2 ~~~l~p~d----~l~p~~l~~IS~~tm~~H~~kHh~~YV~~lN~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fN~~g   77 (212)
T 1coj_A            2 VHKLEPKD----HLKPQNLEGISNEQIEPHFEAHYKGYVAKYNEIQEKLADQNFADRSKANQNYSEYRELKVEETFNYMG   77 (212)
T ss_dssp             CCCCCCCG----GGCCCSCSSSCHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTTTCGGGCCSSSCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCC----CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCC
T ss_conf             87879887----57878753550999999999889999999999997063433110456744367665665788763354


Q ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC--CCEEEEEECCCCCCCCCC
Q ss_conf             256899985078888876406899999974308999999999998620143431001034--101234431476754001
Q gi|254780495|r   74 YYNHNLFWACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK--NGKLEISKTQNAENPLIN  151 (205)
Q Consensus        74 ~~nH~lff~~l~p~~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~--~~~L~i~~~~n~~~p~~~  151 (205)
                      ++||+|||++|+|+ +++.|++.|+++|+++|||+|+|+++|+++|++  |||||||+++  ++++.|.+++++++|...
T Consensus        78 ~~nH~~fw~~l~p~-g~~~P~~~L~~~I~~~FGS~d~fk~~f~~~a~~--~sGW~wL~~~~~~~~~~i~~~~~~~~~~~~  154 (212)
T 1coj_A           78 VVLHELYFGMLTPG-GKGEPSEALKKKIEEDIGGLDACTNELKAAAMA--FRGWAILGLDIFSGRLVVNGLDAHNVYNLT  154 (212)
T ss_dssp             HHHHHHHHTTBCTT-CBSCCCHHHHHHHHHHTSCHHHHHHHHHHHHHH--CSSEEEEEEETTTTEEEEEEESBTTBSCCT
T ss_pred             CCEEHEEEEEECCC-CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCC--CCCCEEEEEECCCCEEEECCCCCCCCCCCC
T ss_conf             01001035521699-998875999999998828999999999986035--677659999558872332146789986667


Q ss_pred             CCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
Q ss_conf             4785356437687769875177499999998613598999999999997347
Q gi|254780495|r  152 GAIPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAMLAQK  203 (205)
Q Consensus       152 ~~~PlL~iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a~~~~~  203 (205)
                      +.+|||||||||||||+||||+|++||++| |++|||++|++||++|+++.+
T Consensus       155 ~~~PlL~iDvWEHAYyldY~n~R~~Yi~~~-~~~INW~~V~~r~~~A~~~~~  205 (212)
T 1coj_A          155 GLIPLIVIDTYEHAYYVDYKNKRPPYIDAF-FKNINWDVVNERFEKAMKAYE  205 (212)
T ss_dssp             TCEEEEEEECSGGGTHHHHTTCHHHHHHHH-HHTBBHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEEHHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHHHHHHHHHH
T ss_conf             883489874446672887455789999999-974199999999999999999