HHsearch results for GI: 254780495 and protein with PDBid: 3dc5_A
>3dc5_A Superoxide dismutase [MN] 2; alpha hairpin N domain, alpha/beta C domain, oxidoreductase, manganese, metal-binding, mitochondrion; 1.70A {Caenorhabditis elegans} PDB: 3dc6_A
Probab=100.00 E-value=0 Score=468.58 Aligned_cols=193 Identities=34% Similarity=0.708 Sum_probs=168.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 98779999998655586469999999873288789988999850002332004578976410111455433222568999
Q gi|254780495|r 1 MDFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSHGSNAGLFNNASQYYNHNLF 80 (205)
Q Consensus 1 m~~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~~~~~l~~~~~~~~~~~~~~~nnagg~~nH~lf 80 (205)
|.|+||||||+|++|||+||++||++||++|||+||+++|+++++... .... ..+......+..++||+||++||++|
T Consensus 1 m~~~Lp~Lpy~~~~L~p~iS~~t~~~H~~kh~~~YV~~lN~~~~~~~~-~~~~-~~~~~~~~~~~~~~~n~~g~~nH~~y 78 (195)
T 3dc5_A 1 MKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHE-AVSK-GNLKEAIALQPALKFNGGGHINHSIF 78 (195)
T ss_dssp -CCCCCCCSSCTTTTTTTSCHHHHHHHHHTHHHHHHHHHHHHHHHHHH-HHHH-TCHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH-HHHC-CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 987689999984526552799999999999999999887665313177-7736-75888887606753103638889999
Q ss_pred HHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC--CCEEEEEECCCCCCCCCCCCCCEEE
Q ss_conf 85078888876406899999974308999999999998620143431001034--1012344314767540014785356
Q gi|254780495|r 81 WACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK--NGKLEISKTQNAENPLINGAIPILG 158 (205)
Q Consensus 81 f~~l~p~~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~--~~~L~i~~~~n~~~p~~~~~~PlL~ 158 (205)
|++|+|+ ++.|++.|+++|+++|||+|+||++|+++|+++|||||||||++ +++|.|+++.|++ |+ .+.+||||
T Consensus 79 ~~~l~~~--~~~p~~~l~~~I~~~FGS~d~fk~~f~~~a~~~fGsGW~wLv~~~~~~~l~~~~~~~~~-~~-~~~~PlL~ 154 (195)
T 3dc5_A 79 WTNLAKD--GGEPSKELMDTIKRDFGSLDNLQKRLSDITIAVQGSGWGWLGYCKKDKILKIATCANQD-PL-EGMVPLFG 154 (195)
T ss_dssp HHTBCSS--CCCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCCSSEEEEEEEETTTTEEEEEEEETTC-CC-CSSEEEEE
T ss_pred HCCCCCC--CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCC-CC-CCCCCEEE
T ss_conf 6722579--99998699999999818999999999998731356637999997899979984179999-76-79867455
Q ss_pred EEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 437687769875177499999998613598999999999997
Q gi|254780495|r 159 IDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAML 200 (205)
Q Consensus 159 iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a~~ 200 (205)
|||||||||+||||+|++||++| ||+|||++|++||++|.+
T Consensus 155 iDvWEHAYylDY~n~R~~Yi~~f-~~~iNW~~V~~r~~~A~~ 195 (195)
T 3dc5_A 155 IDVWEHAYYLQYKNVRPDYVHAI-WKIANWKNISERFANARQ 195 (195)
T ss_dssp EECSGGGTHHHHTTCHHHHHHHH-GGGBCHHHHHHHHHHHHC
T ss_pred EHHHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHHHHHCC
T ss_conf 31666776998644699999999-961199999999998529