Query gi|254780495|ref|YP_003064908.1| superoxide dismutase [Candidatus Liberibacter asiaticus str. psy62] Match_columns 205 No_of_seqs 109 out of 2087 Neff 6.6 Searched_HMMs 23785 Date Tue May 31 21:00:34 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780495.hhm -d /home/congqian_1/database/pdb/pdb70.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 1gv3_A Manganese superoxide di 100.0 0 0 514.8 20.0 200 2-203 37-242 (248) 2 1unf_X Iron superoxide dismuta 100.0 0 0 503.7 20.4 201 1-202 17-237 (238) 3 2rcv_A Superoxide dismutase [M 100.0 0 0 500.5 19.7 197 1-199 1-202 (202) 4 1my6_A Iron (III) superoxide d 100.0 0 0 495.9 20.1 196 2-198 1-199 (199) 5 1xre_A SODA-2, superoxide dism 100.0 0 0 494.2 20.2 200 2-203 12-216 (217) 6 2cw2_A Superoxide dismutase 1; 100.0 0 0 493.7 19.8 192 2-198 32-224 (226) 7 3js4_A Superoxide dismutase; n 100.0 0 0 489.9 20.2 196 1-199 21-225 (227) 8 3h1s_A Superoxide dismutase; S 100.0 0 0 489.3 19.6 191 1-197 4-195 (195) 9 2cw3_A Pmsod2, iron superoxide 100.0 0 0 491.4 17.8 196 3-200 79-280 (280) 10 1ids_A Iron superoxide dismuta 100.0 0 0 491.8 17.3 199 1-203 1-202 (207) 11 1bsm_A Superoxide dismutase; o 100.0 0 0 491.3 17.1 197 2-201 2-201 (201) 12 1mng_A Manganese superoxide di 100.0 0 0 487.4 19.6 196 1-198 2-203 (203) 13 1ix9_A Mnsod, superoxide dismu 100.0 0 0 487.6 19.4 194 2-199 1-205 (205) 14 3cei_A Superoxide dismutase; o 100.0 0 0 485.8 20.8 195 3-203 2-198 (213) 15 1b06_A Protein (superoxide dis 100.0 0 0 489.7 17.1 198 2-200 8-209 (210) 16 1dt0_A Superoxide dismutase; p 100.0 0 0 488.2 17.9 193 2-199 1-194 (197) 17 1p7g_A Superoxide dismutase; a 100.0 0 0 486.4 18.5 200 1-203 16-218 (222) 18 1ma1_A Superoxide dismutase; m 100.0 0 0 485.4 17.2 195 2-199 8-205 (205) 19 1uer_A SOD, superoxide dismuta 100.0 0 0 482.4 19.0 190 1-195 1-191 (191) 20 2nyb_A Superoxide dismutase [F 100.0 0 0 480.8 20.0 191 2-197 1-192 (192) 21 3bfr_A Superoxide dismutase [M 100.0 0 0 483.2 16.8 196 3-200 10-215 (215) 22 2awp_A Iron super-oxide dismut 100.0 0 0 479.4 19.1 196 1-201 1-198 (198) 23 1pl4_A Superoxide dismutase [M 100.0 0 0 480.2 18.1 195 2-200 1-198 (198) 24 1kkc_A Mnsod, manganese supero 100.0 0 0 479.7 17.4 200 1-203 14-216 (221) 25 3kky_A Mnsod, superoxide dismu 100.0 0 0 477.0 19.5 198 1-199 1-211 (211) 26 3lio_A Iron superoxide dismuta 100.0 0 0 472.7 19.3 189 2-195 1-191 (192) 27 3dc5_A Superoxide dismutase [M 100.0 0 0 468.6 18.5 193 1-200 1-195 (195) 28 2gpc_A Iron superoxide dismuta 100.0 0 0 455.9 18.7 189 2-195 1-194 (194) 29 1coj_A Protein (superoxide dis 100.0 0 0 424.3 16.7 194 2-203 2-205 (212) 30 1fr2_B Colicin E9; protein-pro 68.3 2.2 9.3E-05 21.1 2.1 27 90-116 31-58 (134) 31 2jb0_B Colicin E7; hydrolase/i 61.8 4 0.00017 19.6 2.4 26 91-116 29-55 (131) 32 7cei_B Protein (colicin E7 imm 56.3 5.8 0.00024 18.7 2.5 27 91-117 104-131 (206) 33 2fyq_A Chymotrypsin-like cyste 46.2 7 0.00029 18.2 1.6 21 121-143 23-43 (194) 34 3oru_A DUF1989 family protein; 34.6 20 0.00083 15.5 2.4 20 124-143 42-61 (234) No 1 >1gv3_A Manganese superoxide dismutase; anabaena PCC 7120,; 2.0A {Anabaena SP} SCOP: a.2.11.1 d.44.1.1 Probab=100.00 E-value=0 Score=514.78 Aligned_cols=200 Identities=36% Similarity=0.734 Sum_probs=184.7 Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHH----CCCHHHHHHHHHHHH Q ss_conf 877999999865558646999999987328878998899985000-233200457897641----011145543322256 Q gi|254780495|r 2 DFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDA-EMLHLSLEEIIIKSH----GSNAGLFNNASQYYN 76 (205) Q Consensus 2 ~~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~-~~~~~~l~~~~~~~~----~~~~~~~nnagg~~n 76 (205) +|+||||||+|+||||+||++||++||+|||+|||++||+++++. +....++++++.... ..+..++||+|||+| T Consensus 37 ~~~LP~LPY~y~aLeP~IS~~tm~~Hh~kHh~gYV~~LN~~l~~~~~~~~~~l~~i~~~~~~~~~~~~~~v~nnagg~~N 116 (248) T 1gv3_A 37 PAELPPLPYGYDALEKAIDAETMKLHHDKHHAAYVNNLNNALKKHPELQNSSVEALLRDLNSVPEDIRTTVRNNGGGHLN 116 (248) T ss_dssp TCCCCCCSSCTTTTTTTSCHHHHHHHHHTHHHHHHHHHHHHHHTCGGGGGSCHHHHHHTGGGSCTTTHHHHHHHHHHHHH T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 87799998983524441699999999999999999999999971288764989999861343146778999988888877 Q ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC-CCEEEEEECCCCCCCCCCCCCC Q ss_conf 899985078888876406899999974308999999999998620143431001034-1012344314767540014785 Q gi|254780495|r 77 HNLFWACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK-NGKLEISKTQNAENPLINGAIP 155 (205) Q Consensus 77 H~lff~~l~p~~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~-~~~L~i~~~~n~~~p~~~~~~P 155 (205) |+|||+||+|+ +++.|++.|+++|+++|||+|+||++|+++|.++|||||||||++ +|+|.|++++||++|++.+.+| T Consensus 117 H~lFw~~l~P~-g~~~P~g~L~~aI~~~FGS~d~fk~~F~~aa~~~fGSGWvwLv~~~~g~L~i~~t~n~~~p~~~~~~P 195 (248) T 1gv3_A 117 HTIFWQIMSPD-GGGQPTGDIAQEINQTFGSFEEFKKQFNQAGGDRFGSGWVWLVRNPQGQLQVVSTPNQDNPIMEGSYP 195 (248) T ss_dssp HHHHHHTBCTT-CCSSCCHHHHHHHHHHHSSHHHHHHHHHHHHHHCCSSEEEEEEECTTSCEEEEEEETTCCGGGGTCEE T ss_pred HHHHHCCCCCC-CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCEE T ss_conf 99986144889-99999999999999874899999999999987275770799999899988999842777765679974 Q ss_pred EEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC Q ss_conf 356437687769875177499999998613598999999999997347 Q gi|254780495|r 156 ILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAMLAQK 203 (205) Q Consensus 156 lL~iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a~~~~~ 203 (205) ||||||||||||+||||+|++||++| |++|||++|++||+.|.++++ T Consensus 196 lL~lDvWEHAYyldY~n~r~~Yi~~~-~~~inW~~v~~r~~~A~~~~~ 242 (248) T 1gv3_A 196 IMGNDVWEHAYYLRYQNRRPEYLNNW-WNVVNWSEINRRTQASRQSNS 242 (248) T ss_dssp EEEEECSGGGTHHHHTTCHHHHHHHG-GGGBCHHHHHHHHHHC----- T ss_pred EEEEEEHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHHHHHHHHCC T ss_conf 79886355552887564789999999-974199999999999986465 No 2 >1unf_X Iron superoxide dismutase; oxidoreductase, eukaryotic, metalloprotein; 1.97A {Vigna unguiculata} SCOP: a.2.11.1 d.44.1.1 Probab=100.00 E-value=0 Score=503.68 Aligned_cols=201 Identities=48% Similarity=0.847 Sum_probs=184.0 Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHH Q ss_conf 9877999999865558646999999987328878998899985000233200457897641--01114554332225689 Q gi|254780495|r 1 MDFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSH--GSNAGLFNNASQYYNHN 78 (205) Q Consensus 1 m~~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~~~~~l~~~~~~~~--~~~~~~~nnagg~~nH~ 78 (205) |.|+||||||+|+||||+||++||++||+|||||||++||+++++++..+.++.+++.... ..+..+|||+||++||+ T Consensus 17 ~~~~Lp~Lpy~~~aLeP~is~~t~~~H~~kHhqgYV~~LN~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fN~ag~~~NH~ 96 (238) T 1unf_X 17 AKFELKPPPYPLNGLEPVMSQQTLEFHWGKHHRTYVENLKKQVVGTELDGKSLEEIIVTAYNKGDILPAFNNAAQVWNHD 96 (238) T ss_dssp SSCCCCCCSSCTTTTTTTSCHHHHHHHTTTHHHHHHHHHHHHC--CTTTTCCHHHHHHHHHGGGSCCTHHHHHHHHHHHH T ss_pred CEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH T ss_conf 11568999888453544169999999999999999999999875034556405665555420300599885017889999 Q ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC-----------------CCEEEEEE Q ss_conf 9985078888876406899999974308999999999998620143431001034-----------------10123443 Q gi|254780495|r 79 LFWACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK-----------------NGKLEISK 141 (205) Q Consensus 79 lff~~l~p~~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~-----------------~~~L~i~~ 141 (205) |||++|+|+ +++.|++.|+++|+++|||+|+||++|+++|.++|||||||||++ +++|.|++ T Consensus 97 ~Fw~~L~P~-~~~~P~~~L~~aI~~~FGS~d~fk~~F~~~A~s~fGSGW~wLv~~~~~~~~~~~~~~~~~~~~~~l~i~~ 175 (238) T 1unf_X 97 FFWECMKPG-GGGKPSGELLELIERDFGSFEKFLDEFKAAAATQFGSGWAWLAYKASKLDGENAANPPSADEDNKLVVIK 175 (238) T ss_dssp HHHHTBCTT-CCSCCCHHHHHHHHHHHSSHHHHHHHHHHHHHHCCSSEEEEEEEECGGGC---------CCCCSEEEEEE T ss_pred HHHHCCCCC-CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEE T ss_conf 998223889-9999998999999998389999999999864067765499999957755432345664434344225785 Q ss_pred CCCCCCCCCCC-CCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHC Q ss_conf 14767540014-78535643768776987517749999999861359899999999999734 Q gi|254780495|r 142 TQNAENPLING-AIPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAMLAQ 202 (205) Q Consensus 142 ~~n~~~p~~~~-~~PlL~iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a~~~~ 202 (205) +.||++|++.+ .+|||||||||||||+||||+|++||++||.++|||++|++||++|...+ T Consensus 176 t~n~~~p~~~~~~~PlL~iDvWEHAYyldY~n~R~~Yv~~fw~~~INW~~V~~r~~~A~~~~ 237 (238) T 1unf_X 176 SPNAVNPLVWGGYYPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWDAVSSRLEQAKALS 237 (238) T ss_dssp EETTCCGGGSCSEEEEEEEECSGGGTHHHHTTCHHHHHHHHHHHTBCHHHHHHHHHHHHHHH T ss_pred ECCCCCCCCCCCCEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHC T ss_conf 04777866689805789884456672987466789999999996649999999999976024 No 3 >2rcv_A Superoxide dismutase [MN]; bacillus subtilis,superoxide dismutase, manganese, metal- binding, oxidoreductase, phosphorylation; 1.60A {Bacillus subtilis} PDB: 1xuq_A 1jr9_A Probab=100.00 E-value=0 Score=500.48 Aligned_cols=197 Identities=45% Similarity=0.853 Sum_probs=184.8 Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHH----CCCHHHHHHHHHHH Q ss_conf 987799999986555864699999998732887899889998500-0233200457897641----01114554332225 Q gi|254780495|r 1 MDFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASD-AEMLHLSLEEIIIKSH----GSNAGLFNNASQYY 75 (205) Q Consensus 1 m~~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~-~~~~~~~l~~~~~~~~----~~~~~~~nnagg~~ 75 (205) |+|+||||||+|++|||+||++||++||++||+|||++||+++++ ++..+.++++++.... ..+..++||+|||+ T Consensus 1 m~~~lp~LpY~~~~Lep~iS~~~l~~H~~kh~~gYV~~lN~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nn~gg~~ 80 (202) T 2rcv_A 1 MAYELPELPYAYDALEPHIDKETMTIHHTKHHNTYVTNLNKAVEGNTALANKSVEELVADLDSVPENIRTAVRNNGGGHA 80 (202) T ss_dssp -CCCCCCCSSCTTTTTTTSCHHHHHHHHHTHHHHHHHHHHHHSTTCHHHHTSCHHHHHHTGGGSCTTTHHHHHHHHHHHH T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH T ss_conf 98868999888564756379999999999999999999999988638775089999987654120256799998788999 Q ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCC Q ss_conf 68999850788888764068999999743089999999999986201434310010341012344314767540014785 Q gi|254780495|r 76 NHNLFWACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVKNGKLEISKTQNAENPLINGAIP 155 (205) Q Consensus 76 nH~lff~~l~p~~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~~~~L~i~~~~n~~~p~~~~~~P 155 (205) ||+|||+||+|+ +++.|++.|+++|+++|||+|+|+++|+++|+++||||||||+.++++|.|++++||++|++.+.+| T Consensus 81 nH~~f~~~l~p~-~~~~p~~~l~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wL~~~~~~l~i~~~~n~~~~~~~~~~P 159 (202) T 2rcv_A 81 NHKLFWTLLSPN-GGGEPTGALAEEINSVFGSFDKFKEQFAAAAAGRFGSGWAWLVVNNGKLEITSTPNQDSPLSEGKTP 159 (202) T ss_dssp HHHHHHHTBCTT-CCSCCCHHHHHHHHHHHSSHHHHHHHHHHHHHHCCSSEEEEEEEETTEEEEEEEETTCCGGGGTCEE T ss_pred HHHHHHHCCCCC-CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCEE T ss_conf 999998014889-9999998999999998699999999987652124675599998269846888622887876579854 Q ss_pred EEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH Q ss_conf 35643768776987517749999999861359899999999999 Q gi|254780495|r 156 ILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAM 199 (205) Q Consensus 156 lL~iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a~ 199 (205) ||||||||||||+||||+|++||++| |++|||++||+||++|. T Consensus 160 ll~~D~wEHAYylDY~n~r~~Yi~~f-~~~inW~~v~~ry~~ak 202 (202) T 2rcv_A 160 ILGLDVWEHAYYLNYQNRRPDYISAF-WNVVNWDEVARLYSERK 202 (202) T ss_dssp EEEEECSGGGTHHHHTTCHHHHHHHH-TTTBCHHHHHHHHHHC- T ss_pred EEEEEHHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHHHHCC T ss_conf 79851146677987435689999999-97519999999998569 No 4 >1my6_A Iron (III) superoxide dismutase; iron speroxide dismutase, thermophIle, reactive oxygen species, cyanobacteria, SOD, fesod; 1.60A {Thermosynechococcus elongatus} SCOP: a.2.11.1 d.44.1.1 Probab=100.00 E-value=0 Score=495.92 Aligned_cols=196 Identities=45% Similarity=0.898 Sum_probs=184.8 Q ss_pred CCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHH Q ss_conf 87799999986555864-6999999987328878998899985000233200457897641--01114554332225689 Q gi|254780495|r 2 DFKLPNLPYSYDDLSPY-MSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSH--GSNAGLFNNASQYYNHN 78 (205) Q Consensus 2 ~~~Lp~Lpy~~~aLeP~-IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~~~~~l~~~~~~~~--~~~~~~~nnagg~~nH~ 78 (205) +|+||||||+|++|||+ ||++||++||+|||||||++||+++++++..+.+..+++.... ..+..++||+||++||+ T Consensus 1 ~f~l~~Lpy~y~aLeP~~iS~~t~~~H~~khh~gYV~~lN~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~~~nh~ 80 (199) T 1my6_A 1 AFVQEPLPFDPGALEPYGMSAKTLEFHYGKHHKGYVDNLNKLTQDTELADKSLEDVIRTTYGDAAKVGIFNNAAQVWNHT 80 (199) T ss_dssp CCCCCCCSSCTTTTGGGTCCHHHHHHHHHTHHHHHHHHHHHHHTTSGGGGSCHHHHHHHHTTCTTCHHHHHHHHHHHHHH T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99799999883437856719999999999999999999999886678764046778887514445567786116899999 Q ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCEEE Q ss_conf 99850788888764068999999743089999999999986201434310010341012344314767540014785356 Q gi|254780495|r 79 LFWACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVKNGKLEISKTQNAENPLINGAIPILG 158 (205) Q Consensus 79 lff~~l~p~~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~~~~L~i~~~~n~~~p~~~~~~PlL~ 158 (205) |||++|+|++ ++.|++.|.++|+++|||+|+||++|+++|+++|||||||||+++++|+|+++.||++|++.+.+|||| T Consensus 81 ~F~~~l~p~~-~~~p~~~l~~~I~~~FGS~d~fk~~F~~~a~~~~GsGW~wL~~~~~~l~i~~~~~~~~p~~~~~~Pil~ 159 (199) T 1my6_A 81 FFWNSLKPGG-GGVPTGDVAARINSAFGSYDEFKAQFKNAAATQFGSGWAWLVLEAGTLKVTKTANAENPLVHGQVPLLT 159 (199) T ss_dssp HHHHTBCTTC-CSCCCHHHHHHHHHHHSSHHHHHHHHHHHHHHCCSSEEEEEEEETTEEEEEEEETTCCGGGGTCEEEEE T ss_pred HHHHCCCCCC-CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEE T ss_conf 9997049999-999898999999987489999999999988607776699999738953377420788985578733477 Q ss_pred EEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHH Q ss_conf 4376877698751774999999986135989999999999 Q gi|254780495|r 159 IDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETA 198 (205) Q Consensus 159 iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a 198 (205) |||||||||+||||+|++||++||+++|||++||+||++| T Consensus 160 lDvWEHAYyldY~n~r~~Yi~~f~~~~inW~~v~~r~~~A 199 (199) T 1my6_A 160 IDVWEHAYYLDYQNRRPDFIDNFLNQLVNWDFVAKNLAAA 199 (199) T ss_dssp EECSGGGTHHHHTTCHHHHHHHHHHHTBCHHHHHHHHHC- T ss_pred EEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHC T ss_conf 6332678698864368999999999664999999999719 No 5 >1xre_A SODA-2, superoxide dismutase; spine, oxidoreductase; 1.80A {Bacillus anthracis} Probab=100.00 E-value=0 Score=494.24 Aligned_cols=200 Identities=39% Similarity=0.753 Sum_probs=184.6 Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHH----HCCCHHHHHHHHHHHH Q ss_conf 877999999865558646999999987328878998899985000-23320045789764----1011145543322256 Q gi|254780495|r 2 DFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDA-EMLHLSLEEIIIKS----HGSNAGLFNNASQYYN 76 (205) Q Consensus 2 ~~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~-~~~~~~l~~~~~~~----~~~~~~~~nnagg~~n 76 (205) .|+||||||+|++|||+||++||++||++||||||+++|++++++ +....++++++... ...+..++||+|||+| T Consensus 12 ~~~Lp~Lpy~~~~Lep~iS~~t~~~H~~kh~~gYV~~lN~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nnagg~~n 91 (217) T 1xre_A 12 SFQLPKLSYDYDELEPYIDSNTLSIHHGKHHATYVNNLNAALENYSELHNKSLEELLCNLETLPKEIVTAVRNNGGGHYC 91 (217) T ss_dssp CCCCCCCSSCTTTTTTTSCHHHHHHHHHTHHHHHHHHHHHHHTTCGGGTTCCHHHHHHCGGGSCTTTHHHHHHHHHHHHH T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH T ss_conf 44279998985635562699999999999999999999999986588873788888764653516777898875678878 Q ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCE Q ss_conf 89998507888887640689999997430899999999999862014343100103410123443147675400147853 Q gi|254780495|r 77 HNLFWACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVKNGKLEISKTQNAENPLINGAIPI 156 (205) Q Consensus 77 H~lff~~l~p~~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~~~~L~i~~~~n~~~p~~~~~~Pl 156 (205) |+|||++|+|+ +++.|++.|+++|+++|||+|+|+++|+++|+++|||||||||.++++|.|++++||++|++.+.+|| T Consensus 92 H~~fw~~l~p~-g~~~P~g~l~~~I~~~FGS~d~fk~~F~~~A~~~~GsGW~wlv~~~~~L~i~~~~n~~~p~~~~~~Pl 170 (217) T 1xre_A 92 HSLFWEVMSPR-GGGEPNGDVAKVIDYYFNTFDNLKDQLSKAAISRFGSGYGWLVLDGEELSVMSTPNQDTPLQEGKIPL 170 (217) T ss_dssp HHHHHHTBCTT-CCSCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCCSSEEEEEEEETTEEEEEEEETTCCGGGGTCEEE T ss_pred HHHHHHHCCCC-CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCEEE T ss_conf 99999762877-99999899999999881999999999999886175645999981387245687238778777798348 Q ss_pred EEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC Q ss_conf 56437687769875177499999998613598999999999997347 Q gi|254780495|r 157 LGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAMLAQK 203 (205) Q Consensus 157 L~iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a~~~~~ 203 (205) |||||||||||+||||+|++||++| |++|||++|++||++|++++| T Consensus 171 L~lDvWEHAYyldy~n~r~~Yi~~~-~~~inW~~v~~R~~~Ai~~~~ 216 (217) T 1xre_A 171 LVIDVWEHAYYLKYQNRRPEFVTNW-WHTVNWDRVNEKYLQAIQSQK 216 (217) T ss_dssp EEEECSGGGTHHHHTTCHHHHHHHH-GGGBCHHHHHHHHHHHC---- T ss_pred EEEEHHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHHHHHHHHCC T ss_conf 9872555675998555789999999-985199999999999997466 No 6 >2cw2_A Superoxide dismutase 1; SOD, oxidoreductase; 1.86A {Perkinsus marinus} Probab=100.00 E-value=0 Score=493.73 Aligned_cols=192 Identities=43% Similarity=0.838 Sum_probs=177.3 Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH Q ss_conf 87799999986555864699999998732887899889998500-02332004578976410111455433222568999 Q gi|254780495|r 2 DFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASD-AEMLHLSLEEIIIKSHGSNAGLFNNASQYYNHNLF 80 (205) Q Consensus 2 ~~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~-~~~~~~~l~~~~~~~~~~~~~~~nnagg~~nH~lf 80 (205) .|+||||||+|+||||+||++||++||+||||+||++||+++++ .+....++++++.. .+...+||+||++||+|| T Consensus 32 ~~~Lp~LpY~~~aLeP~IS~~t~~~Hh~kHh~gYV~~LN~~~~~~~~~~~~~~~~~~~~---~~~~~~n~ag~~~NH~~f 108 (226) T 2cw2_A 32 PFQCPPLPYVKNALEPHMSAETLTYHHDKHHQTYVDTLNSIAAENSTIASKTLEQIIKT---ETGKPFNQAAQVYNHTFF 108 (226) T ss_dssp SSCCCCCSSCTTTTTTTSCHHHHHHHHHTHHHHHHHHHHHHHTTCHHHHHSCHHHHHHH---CCHHHHHHHHHHHHHHHH T ss_pred CEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH---HCCCHHHHCCCHHHHHHH T ss_conf 30489998985646430699999999999999999999999887389885786766666---423134420103546687 Q ss_pred HHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEE Q ss_conf 85078888876406899999974308999999999998620143431001034101234431476754001478535643 Q gi|254780495|r 81 WACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVKNGKLEISKTQNAENPLINGAIPILGID 160 (205) Q Consensus 81 f~~l~p~~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~~~~L~i~~~~n~~~p~~~~~~PlL~iD 160 (205) |++|+|+ +++.|++.|.++|+++|||+|+||++|+++|+++||||||||++++++|+|++|+||++|++.+.+|||||| T Consensus 109 w~~l~P~-~~~~P~g~L~~aI~~~FGS~d~fk~~F~~~a~~~fGSGW~wLv~~~~~l~i~~t~n~~~p~~~~~~PlL~lD 187 (226) T 2cw2_A 109 FNNLAPN-GGGEPTGKIAELITRDFGSFEKFKEDFSAAAVGHFGSGWVWLIADDGKLKIVQGHDAGNPIRESKTPLMNID 187 (226) T ss_dssp HHTBCTT-CCSSCCHHHHHHHHHHHSSHHHHHHHHHHHHHHCCSSEEEEEEESSSCEEEEEEETTCCGGGTTCEEEEEEE T ss_pred HHHCCCC-CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEE T ss_conf 6500789-999999899999999866699999999999851787669999973882478872488998422685759875 Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHH Q ss_conf 76877698751774999999986135989999999999 Q gi|254780495|r 161 VWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETA 198 (205) Q Consensus 161 vWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a 198 (205) |||||||+||||+|++||++| |++|||++||+||++| T Consensus 188 vWEHAYyldY~n~R~~Yi~~f-~~~InW~~V~~r~~~A 224 (226) T 2cw2_A 188 VWEHAYYIDYRNARAQYVKNY-WNLVNWDFVNDNVAKA 224 (226) T ss_dssp CSGGGTHHHHTTCHHHHHHHH-TTTBCHHHHHHHHHHT T ss_pred HHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHHHHC T ss_conf 577651887555699999999-9864999999999973 No 7 >3js4_A Superoxide dismutase; niaid, ssgcid, seattle structural genomics center for infectious disease, GRAM-negative bacteria; 1.95A {Anaplasma phagocytophilum HZ} Probab=100.00 E-value=0 Score=489.90 Aligned_cols=196 Identities=42% Similarity=0.816 Sum_probs=176.4 Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH---HHHHHHHHHH---HCCCHHHHHHHHHH Q ss_conf 98779999998655586469999999873288789988999850002332---0045789764---10111455433222 Q gi|254780495|r 1 MDFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLH---LSLEEIIIKS---HGSNAGLFNNASQY 74 (205) Q Consensus 1 m~~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~~~---~~l~~~~~~~---~~~~~~~~nnagg~ 74 (205) |.|+|||||| +||||+||++||++||+|||||||++||+++++++.++ .++.+++.+. ....+.+|||+||+ T Consensus 21 ~~f~Lp~LpY--daLeP~IS~~tl~~Hh~kHhkgYV~~LN~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ifnnag~~ 98 (227) T 3js4_A 21 SMFELSDLPY--EGLEPYISSHLLDRHYNGHHKTYVDVLNKLVVGTEFEGLGNESLGDIVVKAHNSGSAGRAIFNNAAQI 98 (227) T ss_dssp CCCCCCCCSS--SCBTTTBCHHHHHHHHHTHHHHHHHHHHHHTTTSTTTTCCGGGHHHHHHHHHHTGGGGHHHHHHHHHH T ss_pred CCCCCCCCCC--CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHH T ss_conf 8476999591--20300059999999999899999999999997425454312316666666502512569998647899 Q ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC--CCEEEEEECCCCCCCCC-C Q ss_conf 56899985078888876406899999974308999999999998620143431001034--10123443147675400-1 Q gi|254780495|r 75 YNHNLFWACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK--NGKLEISKTQNAENPLI-N 151 (205) Q Consensus 75 ~nH~lff~~l~p~~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~--~~~L~i~~~~n~~~p~~-~ 151 (205) +||+|||++|+|+ +++.|++.|+++|+++|||+|+|+++|+++|+++|||||||||++ +++|.|+++.||++|++ . T Consensus 99 ~NH~~fw~~l~P~-~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~~~fGsGW~wLv~~~~~~~l~i~~~~n~~~p~~~~ 177 (227) T 3js4_A 99 WNHDFYWQSMKPN-GGGNPPEKLREMIEHSFGSVEGFNNAFTTSGLGQFGSGWVWLVYDEDAKALKVVSTANADSPLLTQ 177 (227) T ss_dssp HHHHHHHHTBCTT-CCSSCCHHHHHHHHHHHSSHHHHHHHHHHHHHHSCSSEEEEEEEETTTTEEEEEEEETTCCGGGST T ss_pred HHHHHHHCCCCCC-CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCC T ss_conf 9999997165889-999888999999998737699999999999973777852788881788723666420688976565 Q ss_pred CCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH Q ss_conf 478535643768776987517749999999861359899999999999 Q gi|254780495|r 152 GAIPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAM 199 (205) Q Consensus 152 ~~~PlL~iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a~ 199 (205) +.+|||||||||||||+||+|+|++||++||+|+|||++||+||++|- T Consensus 178 ~~~PlL~lDvWEHAYyldY~n~r~~Yi~~f~~n~InW~~V~~r~~~Ag 225 (227) T 3js4_A 178 GQLPLATMDVWEHAYYLDYLNLRKKYIDVFLEHLLNWDFVLGRLEDAG 225 (227) T ss_dssp TEEEEEEEECSGGGTHHHHTTCHHHHHHHHHHHTBCHHHHHHHHHHTT T ss_pred CCEEEEEEEEHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCC T ss_conf 998689872078653654266879999999986749999999999722 No 8 >3h1s_A Superoxide dismutase; SOBD, csgid, oxidoreductase, structural genomics, national institute of allergy and infectious diseases; 1.90A {Francisella tularensis subsp} Probab=100.00 E-value=0 Score=489.33 Aligned_cols=191 Identities=45% Similarity=0.861 Sum_probs=179.4 Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH Q ss_conf 98779999998655586469999999873288789988999850002332004578976410111455433222568999 Q gi|254780495|r 1 MDFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSHGSNAGLFNNASQYYNHNLF 80 (205) Q Consensus 1 m~~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~~~~~l~~~~~~~~~~~~~~~nnagg~~nH~lf 80 (205) |+|+||||||+|++|||+||++||++||+|||||||++||+++++++.++.++.+++.. .+..+|||+|||+||+|| T Consensus 4 m~~~Lp~Lpy~~~~Lep~is~~tl~~H~~khh~gYV~~lN~~~~~~~~~~~~~~~~~~~---~~~~~~n~ag~~~NH~~f 80 (195) T 3h1s_A 4 MKFELPKLPYAVDALESTISKETIEYHYGKHHQTYVTNLNNLVEGTEHDGRNLEEIVKT---SNGGIFNNAAQVFNHTFY 80 (195) T ss_dssp -CCCCCCCSSCTTTTTTTSCHHHHHHHTTTHHHHHHHHHHHHHTTSTTTTCCHHHHHHH---CCHHHHHHHHHHHHHHHH T ss_pred CCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH---CCHHHHHHHHHHHHHHHH T ss_conf 70428999888463655279999999999999999999999986106530620344420---016766305688998999 Q ss_pred HHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC-CCEEEEEECCCCCCCCCCCCCCEEEE Q ss_conf 85078888876406899999974308999999999998620143431001034-10123443147675400147853564 Q gi|254780495|r 81 WACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK-NGKLEISKTQNAENPLINGAIPILGI 159 (205) Q Consensus 81 f~~l~p~~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~-~~~L~i~~~~n~~~p~~~~~~PlL~i 159 (205) |++|+|+ ++.|++.|+++|+++|||+|+||++|+++|+++||||||||+.+ +++|.|++|+||++|++.+++||||| T Consensus 81 ~~~l~p~--~~~~~~~l~~~I~~~FGS~d~fk~~F~~~a~~~~GSGWvwLv~~~~~~l~i~~~~n~~~p~~~~~~PlL~l 158 (195) T 3h1s_A 81 WNCLTPN--KTEASSQLKAALIETFGSVENFKEQFSKAAIATFGSGWAWLVKNTEGKLEIVTTSNAGCPLTENKKPLLTF 158 (195) T ss_dssp HHTBCSS--CCCCCHHHHHHHHHHHSSHHHHHHHHHHHHHHCCSSEEEEEEECTTSCEEEEEEETTCCGGGGTCEEEEEE T ss_pred HHCCCCC--CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEE T ss_conf 8426887--78887499999999819999999999998850564549999997889778885037778654788433875 Q ss_pred EHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHH Q ss_conf 37687769875177499999998613598999999999 Q gi|254780495|r 160 DVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYET 197 (205) Q Consensus 160 DvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~ 197 (205) ||||||||+||||+|++||++| |++|||++||+||.. T Consensus 159 DvWEHAYyldY~n~r~~Yi~~~-~~~inW~~v~~r~~~ 195 (195) T 3h1s_A 159 DVWEHAYYIDYRNARPKYVEAL-WDIVNWQFVSEQFAD 195 (195) T ss_dssp ECSGGGTHHHHTTCHHHHHHHH-GGGBCHHHHHHHHC- T ss_pred EHHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHHCC T ss_conf 3557788988643699999999-974199999987549 No 9 >2cw3_A Pmsod2, iron superoxide dismutase; oxidoreductase; 2.50A {Perkinsus marinus} Probab=100.00 E-value=0 Score=491.43 Aligned_cols=196 Identities=33% Similarity=0.682 Sum_probs=175.3 Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHH Q ss_conf 779999998655586469999999873288789988999850002332004578976-4101114554332225689998 Q gi|254780495|r 3 FKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIK-SHGSNAGLFNNASQYYNHNLFW 81 (205) Q Consensus 3 ~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~~~~~l~~~~~~-~~~~~~~~~nnagg~~nH~lff 81 (205) +...+|||+|+||||+||++||++||+||||+||++||++++..+ ...++.+++.. ....++.+|||+|||+||+||| T Consensus 79 ~~~~~LPY~ydaLEP~IS~~tm~~Hh~KHhqgYV~~LN~~~~~~~-~~~~~~~~~~~~~~~~~~~ifNnaGg~~NH~lfw 157 (280) T 2cw3_A 79 GLRMTLPYGLEALEPVISAATVDFHYNKHHQGYIQKLLDATGLPE-SRINLKSLVTLGPDRAGENVFNAAGQIYNHNMYW 157 (280) T ss_dssp SSCCCCSSCTTTTTTTSCHHHHHHHHHTHHHHHHHHHHHHHCCCG-GGCCHHHHHHHCHHHHCHHHHHHHHHHHHHHHHH T ss_pred CCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH-HCCCHHHHHHHCHHHHHHHHHHHCHHHCCCEEEE T ss_conf 971519988563400128999999999889999999999867411-0137587997464442377765011110344576 Q ss_pred HHCCCCCC-CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC--CCEEEEEECCCCCCCCC--CCCCCE Q ss_conf 50788888-76406899999974308999999999998620143431001034--10123443147675400--147853 Q gi|254780495|r 82 ACMKKNDG-KGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK--NGKLEISKTQNAENPLI--NGAIPI 156 (205) Q Consensus 82 ~~l~p~~~-~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~--~~~L~i~~~~n~~~p~~--~~~~Pl 156 (205) ++|+|+++ ++.|++.|+++|+++|||+|+||++|+++|.++|||||||||++ +++|.|++++||++|++ .|.+|| T Consensus 158 ~~L~p~~~~g~~p~~~L~~aI~~~FGS~d~fk~~F~~aA~s~fGSGWvwLv~d~~~~kL~i~~t~n~~~Pl~~~~g~~PL 237 (280) T 2cw3_A 158 LSMVPTSGSGRHVPPRLLKLIRARWGNVDEMKENFMRKATALFGSGWIWLVWDTRERRLDLVGTKDAHSPLSEDAGKIPL 237 (280) T ss_dssp HTBCCTTCCCCSCCHHHHHHHHHHHSSHHHHHHHHHHHHHHCCSSEEEEEEEETTTTEEEEEEEETTCCHHHHTSSEEEE T ss_pred EEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEE T ss_conf 65437888888999999999999748999999999988645776735999986679917789613788976556798368 Q ss_pred EEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH Q ss_conf 56437687769875177499999998613598999999999997 Q gi|254780495|r 157 LGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAML 200 (205) Q Consensus 157 L~iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a~~ 200 (205) |||||||||||+||||+|++||++| |++|||++||+||++||+ T Consensus 238 L~iDvWEHAYYlDY~n~Ra~YI~~f-w~~INW~~Ve~Rl~~Ai~ 280 (280) T 2cw3_A 238 FTCDVWEHAYYLDYQHDRAAYLTRW-WSLINWEFADSNLPSDIE 280 (280) T ss_dssp EEEECSGGGTHHHHTTCHHHHHHHH-HTTBCHHHHHHTC----- T ss_pred EEEEHHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHHHHHHC T ss_conf 9962688660887665889999999-876099999999998609 No 10 >1ids_A Iron superoxide dismutase; 2.00A {Mycobacterium tuberculosis} SCOP: a.2.11.1 d.44.1.1 PDB: 1gn2_A 1gn3_A 1gn6_A 1gn4_A Probab=100.00 E-value=0 Score=491.80 Aligned_cols=199 Identities=33% Similarity=0.557 Sum_probs=178.2 Q ss_pred CC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH Q ss_conf 98-77999999865558646999999987328878998899985000233200457897641011145543322256899 Q gi|254780495|r 1 MD-FKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSHGSNAGLFNNASQYYNHNL 79 (205) Q Consensus 1 m~-~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~~~~~l~~~~~~~~~~~~~~~nnagg~~nH~l 79 (205) |+ |+||||||+|++|||+||++||++||+||||+||++||+++++++..... +.+......+..++||+|||+||+| T Consensus 1 ~~~f~Lp~Lpy~~~~LeP~is~~t~~~H~~kH~~~YV~~lN~~~~~~~~~~~~--~~~~~~~~~~~~~~~n~~g~~NH~~ 78 (207) T 1ids_A 1 MAEYTLPDLDWDYGALEPHISGQINELHHSKHHATYVKGANDAVAKLEEARAK--EDHSAILLNEKNLAFNLAGHVNHTI 78 (207) T ss_dssp -CCCCCCCCSSCTTTTTTTSCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHT--TCCTTHHHHHHHHHHHHHHHHHHHH T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99876799988845354516999999999999999999799998761887622--1167787641012123455656999 Q ss_pred HHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC--CCEEEEEECCCCCCCCCCCCCCEE Q ss_conf 985078888876406899999974308999999999998620143431001034--101234431476754001478535 Q gi|254780495|r 80 FWACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK--NGKLEISKTQNAENPLINGAIPIL 157 (205) Q Consensus 80 ff~~l~p~~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~--~~~L~i~~~~n~~~p~~~~~~PlL 157 (205) ||++|+|++ ++.|++.|+++|+++|||+|+||++|+++|.++|||||||||++ +++|.|++++||++|++.+.+||| T Consensus 79 fw~~l~p~~-~~~p~g~L~~~I~~~FGS~d~fk~~F~~~a~~~fGsGWvwL~~~~~~~~l~i~~~~~~~~~~~~~~~PlL 157 (207) T 1ids_A 79 WWKNLSPNG-GDKPTGELAAAIADAFGSFDKFRAQFHAAATTVQGSGWAALGWDTLGNKLLIFQVYDHQTNFPLGIVPLL 157 (207) T ss_dssp HHHHBCTTC-CSCCCHHHHHHHHHHHSSHHHHHHHHHHHHHCCSSSEEEEEEEETTTTEEEEEEEETTTBSSCTTEEEEE T ss_pred HHHHCCCCC-CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEE T ss_conf 985228899-9999899999999985649999999998777157862789999668870556651488998767885636 Q ss_pred EEEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC Q ss_conf 6437687769875177499999998613598999999999997347 Q gi|254780495|r 158 GIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAMLAQK 203 (205) Q Consensus 158 ~iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a~~~~~ 203 (205) ||||||||||+||||+|++||++| |++|||++||+||++|+.+.+ T Consensus 158 ~iDvWEHAYylDY~n~R~~Yi~~~-~~~INW~~ve~R~~~A~~~~~ 202 (207) T 1ids_A 158 LLDMWEHAFYLQYKNVKVDFAKAF-WNVVNWADVQSRYAAATSQTK 202 (207) T ss_dssp EEECSGGGTHHHHTTCHHHHHHHG-GGSBCHHHHHHHHHHHHC--- T ss_pred EEHHHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHHHHHHHCCC T ss_conf 520666773876445799999999-975099999999999996476 No 11 >1bsm_A Superoxide dismutase; oxidoreductase; 1.35A {Propionibacterium freudenreichiisubsp} SCOP: a.2.11.1 d.44.1.1 PDB: 1ar4_A 1ar5_A 1bs3_A 1avm_A 1bt8_A Probab=100.00 E-value=0 Score=491.31 Aligned_cols=197 Identities=35% Similarity=0.614 Sum_probs=176.5 Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH Q ss_conf 87799999986555864699999998732887899889998500023320045789764101114554332225689998 Q gi|254780495|r 2 DFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSHGSNAGLFNNASQYYNHNLFW 81 (205) Q Consensus 2 ~~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~~~~~l~~~~~~~~~~~~~~~nnagg~~nH~lff 81 (205) .|+||||||+|++|||+||++||++||+||||+||++||+++++.......... ......+..++||+|||+||+||| T Consensus 2 ~f~lp~Lpy~~~~LeP~is~~t~~~H~~khh~~YV~~LN~~~~~~~~~~~~~~~--~~~~~~~~~~~~n~gg~~NH~~fw 79 (201) T 1bsm_A 2 VYTLPELPYDYSALEPYISGEIMELHHDKHHKAYVDGANTALDKLAEARDKADF--GAINKLEKDLAFNLAGHVNHSVFW 79 (201) T ss_dssp CSCCCCCSSCTTTTTTTSCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTCC--TTHHHHHHHHHHHHHHHHHHHHHH T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHCCCHHHHHHHHHHH T ss_conf 563899988856464617999999999999999999899987540887722118--889987654130046688899999 Q ss_pred HHCCCCCC-CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC--CCEEEEEECCCCCCCCCCCCCCEEE Q ss_conf 50788888-76406899999974308999999999998620143431001034--1012344314767540014785356 Q gi|254780495|r 82 ACMKKNDG-KGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK--NGKLEISKTQNAENPLINGAIPILG 158 (205) Q Consensus 82 ~~l~p~~~-~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~--~~~L~i~~~~n~~~p~~~~~~PlL~ 158 (205) +||+|+++ .+.|++.|.++|+++|||+|+|+++|+++|+++|||||||||++ +++|.+++++||++|++.+.+|||| T Consensus 80 ~~l~p~~~~~~~p~~~L~~~I~~~FGS~d~fk~~F~~~a~~~fGSGWvwLv~~~~~~~l~~~~~~~~~~~~~~~~~PlL~ 159 (201) T 1bsm_A 80 KNMAPKGSAPERPTDELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWASLVWDPLGKRINTLQFYDHQNNLPAGSIPLLQ 159 (201) T ss_dssp HTBCCTTSSCSSCCHHHHHHHHHHHSSHHHHHHHHHHHHHCCSSSEEEEEEEETTTTEEEEEEEETTTBSCCTTCEEEEE T ss_pred HHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEE T ss_conf 86078888999987999999998618789999999998861667746899996899905312123689866679854577 Q ss_pred EEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH Q ss_conf 4376877698751774999999986135989999999999973 Q gi|254780495|r 159 IDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAMLA 201 (205) Q Consensus 159 iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a~~~ 201 (205) |||||||||+||||+|++||++| |++|||++|++||++|.++ T Consensus 160 lDvWEHAYyldY~n~R~~Yi~~~-~~~inW~~V~~r~~~A~~a 201 (201) T 1bsm_A 160 LDMWEHAFYLQYKNVKGDYVKSW-WNVVNWDDVALRFSEARVA 201 (201) T ss_dssp EECSGGGTHHHHTTCHHHHHHHH-HTTBCHHHHHHHHHHTTCC T ss_pred EEHHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHHHHHHCC T ss_conf 30887763876355689999999-9862999999999986259 No 12 >1mng_A Manganese superoxide dismutase; oxidoreductase(superoxide acceptor); 1.80A {Thermus thermophilus} SCOP: a.2.11.1 d.44.1.1 PDB: 3mds_A Probab=100.00 E-value=0 Score=487.44 Aligned_cols=196 Identities=39% Similarity=0.724 Sum_probs=179.5 Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH-HHHH----CCCHHHHHHHHHHH Q ss_conf 987799999986555864699999998732887899889998500023320045789-7641----01114554332225 Q gi|254780495|r 1 MDFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEII-IKSH----GSNAGLFNNASQYY 75 (205) Q Consensus 1 m~~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~~~~~l~~~~-~~~~----~~~~~~~nnagg~~ 75 (205) |+|+||||||+|++|||+||++||++||++||++||++||+++++++..+.+..+.+ .... ..+..++||+|||+ T Consensus 2 ~~~~lp~Lpy~~~~L~p~iS~~~~~~H~~~h~~~YV~~lN~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ag~~~ 81 (203) T 1mng_A 2 YPFKLPDLGYPYEALEPHIDAKTMEIHHQKHHGAYVTNLNAALEKYPYLHGVEVEVLLRHLAALPQDIQTAVRNNGGGHL 81 (203) T ss_dssp CSCCCCCCCSCGGGGTTTSCHHHHHHHHHTHHHHHHHHHHHHHHTCGGGTTCCHHHHHHTGGGSCGGGHHHHHHHHHHHH T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99858999898564756279999999999999999999999997128662388899998887501567789888667889 Q ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC-CCEEEEEECCCCCCCCCCCCC Q ss_conf 6899985078888876406899999974308999999999998620143431001034-101234431476754001478 Q gi|254780495|r 76 NHNLFWACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK-NGKLEISKTQNAENPLINGAI 154 (205) Q Consensus 76 nH~lff~~l~p~~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~-~~~L~i~~~~n~~~p~~~~~~ 154 (205) ||+|||++|+|+ +++.|++.|+++|+++|||+|+||++|+++|+++|||||||||++ .++|.|++++||++|.+.+++ T Consensus 82 nh~~F~~~l~p~-~~~~P~~~L~~~I~~~FGS~d~fk~~f~~~A~~~~GsGWvwLv~~~~~~l~~~~~~~~~~~~~~~~~ 160 (203) T 1mng_A 82 NHSLFWRLLTPG-GAKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGSGWAWLVKDPFGKLHVLSTPNQDNPVMEGFT 160 (203) T ss_dssp HHHHHHHHTCTT-SCSSCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCCSSEEEEEEECTTSCEEEEEEETTCCGGGGTCE T ss_pred HHHHHHHCCCCC-CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCC T ss_conf 899998404889-9999988999999988399999999997600346677699999989998799973378887657976 Q ss_pred CEEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHH Q ss_conf 53564376877698751774999999986135989999999999 Q gi|254780495|r 155 PILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETA 198 (205) Q Consensus 155 PlL~iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a 198 (205) |||||||||||||+||||+|++||++| |++|||++||+||++| T Consensus 161 PlL~lDvWEHAYylDY~n~r~~Yi~~~-~~~inW~~v~~r~~~A 203 (203) T 1mng_A 161 PIVGIDVWEHAYYLKYQNRRADYLQAI-WNVLNWDVAEEFFKKA 203 (203) T ss_dssp EEEEEECSGGGTHHHHTTCHHHHHHHH-TTTCCHHHHHHHHHTC T ss_pred CEEEEEHHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHHHHC T ss_conf 637630566663876455689999999-9750999999999719 No 13 >1ix9_A Mnsod, superoxide dismutase; manganese superoxide dismutase, Y174F mutant, hydrogen bond, reactivity, ultra-high resolution, oxidoreductase; 0.90A {Escherichia coli} SCOP: a.2.11.1 d.44.1.1 PDB: 1i0h_A 1ixb_A 1zlz_A 1d5n_A 1mmm_A 1vew_A 3k9s_A 1en5_A 1en4_A 1i08_A 1en6_A Probab=100.00 E-value=0 Score=487.63 Aligned_cols=194 Identities=42% Similarity=0.816 Sum_probs=178.2 Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHH----CCCHHHHHHHHHHHH Q ss_conf 8779999998655586469999999873288789988999850002-33200457897641----011145543322256 Q gi|254780495|r 2 DFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAE-MLHLSLEEIIIKSH----GSNAGLFNNASQYYN 76 (205) Q Consensus 2 ~~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~-~~~~~l~~~~~~~~----~~~~~~~nnagg~~n 76 (205) .|+||||||+|+||||+||++||++||+|||||||++||++++++. ..+.++.+++.... ..+..++||+|||+| T Consensus 1 ~f~Lp~Lpy~~~aLeP~is~~t~~~H~~khh~gYV~~lN~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nn~gg~~n 80 (205) T 1ix9_A 1 SYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHAN 80 (205) T ss_dssp CCCCCCCSSCTTTTTTTSCHHHHHHHHHTHHHHHHHHHHHHHTTCHHHHTSCHHHHTTCGGGSCHHHHHHHHHHHHHHHH T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH T ss_conf 99899999985646562799999999999999999999999873299883777878887752436676899985388872 Q ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCC------ Q ss_conf 89998507888887640689999997430899999999999862014343100103410123443147675400------ Q gi|254780495|r 77 HNLFWACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVKNGKLEISKTQNAENPLI------ 150 (205) Q Consensus 77 H~lff~~l~p~~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~~~~L~i~~~~n~~~p~~------ 150 (205) |+|||++|+|+ ++|++.|+++|+++|||+|+|+++|+++|+++||||||||++++++|+|++|.||++|++ T Consensus 81 H~~fw~~l~p~---~~p~g~L~~~I~~~FGS~d~fk~~f~~~a~~~fGsGW~wL~~~~~~L~i~~~~n~~~p~~~~~~~~ 157 (205) T 1ix9_A 81 HSLFWKGLKKG---TTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAISG 157 (205) T ss_dssp HHHHHHTBCSS---CCCCHHHHHHHHHHHSSHHHHHHHHHHHHHHCCSSEEEEEEEETTEEEEEEEETTCCGGGCHHHHS T ss_pred HHHHHHHCCCC---CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEEECCCCCCCCCCCCCC T ss_conf 89998212468---999979999999981899999999999986367755999984087035774013477511664346 Q ss_pred CCCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH Q ss_conf 1478535643768776987517749999999861359899999999999 Q gi|254780495|r 151 NGAIPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAM 199 (205) Q Consensus 151 ~~~~PlL~iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a~ 199 (205) .+.+|||||||||||||+||||+|++||++| |++|||++|++||++|. T Consensus 158 ~~~~PlL~iD~WEHAYy~dY~n~r~~Yi~~~-~~~inW~~v~~r~~~ak 205 (205) T 1ix9_A 158 ASGFPIMGLDVWEHAYFLKFQNRRPDYIKEF-WNVVNWDEAAARFAAKK 205 (205) T ss_dssp CCSEEEEEEECSGGGTHHHHTTCHHHHHHHH-HHHBCHHHHHHHHHHHC T ss_pred CCCCCEEEEHHHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHHHHCC T ss_conf 5677502203665540987654689999999-97519999999998568 No 14 >3cei_A Superoxide dismutase; oxidoreductase; 2.40A {Helicobacter pylori} Probab=100.00 E-value=0 Score=485.84 Aligned_cols=195 Identities=39% Similarity=0.808 Sum_probs=182.6 Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH Q ss_conf 77999999865558646999999987328878998899985000233200457897641011145543322256899985 Q gi|254780495|r 3 FKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSHGSNAGLFNNASQYYNHNLFWA 82 (205) Q Consensus 3 ~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~~~~~l~~~~~~~~~~~~~~~nnagg~~nH~lff~ 82 (205) |+||||||+|+||||+||++||++||+||||+||++||+++++++.+..++.+++.. .+..+|||+||++||+|||+ T Consensus 2 f~Lp~LpY~~~aLeP~IS~~t~~~Hh~khh~~YV~~lN~~~~~~~~~~~~~~~~~~~---~~~~~fnnag~~~NH~~fw~ 78 (213) T 3cei_A 2 FTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTYVNNLNNLIKGTDFEKSSLFAILTK---SSGGVFNNAAQIYNHDFYWD 78 (213) T ss_dssp CCCCCCSSCTTCSTTTSCHHHHHHHTTTHHHHHHHHHHHHHTTSTTTTCCHHHHHHH---CCHHHHHHHHHHHHHHHHHH T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH---CCHHHHHHHHHHHHHHHHHC T ss_conf 989999888563644179999999999999999999999987658764777888864---01344310347888999981 Q ss_pred HCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC--CCEEEEEECCCCCCCCCCCCCCEEEEE Q ss_conf 078888876406899999974308999999999998620143431001034--101234431476754001478535643 Q gi|254780495|r 83 CMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK--NGKLEISKTQNAENPLINGAIPILGID 160 (205) Q Consensus 83 ~l~p~~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~--~~~L~i~~~~n~~~p~~~~~~PlL~iD 160 (205) +|+|++ +.|++.|+++|+++|||+|+|+++|+++|.++||||||||+++ +++|.|++++||++|++.+++|||||| T Consensus 79 ~l~p~~--~~~~~~L~~~I~~~FGS~d~fk~~F~~~a~~~~GSGW~wL~~d~~~~~L~i~~~~n~~~p~~~~~~PlL~lD 156 (213) T 3cei_A 79 CLSPKA--TALSDELKGALEKDFGSLEKFKEDFIKSATTLFGSGWNWAAYNLDTQKIEIIQTSNAQTPVTDKKVPLLVVD 156 (213) T ss_dssp TBCSSC--CCCCHHHHHHHHHHHSSHHHHHHHHHHHHHHCCSSEEEEEEECTTTCCEEEEEEETTCCGGGGTCEEEEEEE T ss_pred CCCCCC--CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEE T ss_conf 238877--775378999999986898999999988644002454599999667891789984589998776987689974 Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC Q ss_conf 7687769875177499999998613598999999999997347 Q gi|254780495|r 161 VWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAMLAQK 203 (205) Q Consensus 161 vWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a~~~~~ 203 (205) |||||||+||||+|++||++| |++|||++||+||++|..+.. T Consensus 157 vWEHAYyldY~n~r~~Yi~~~-~~~inW~~V~~r~~~a~~~~~ 198 (213) T 3cei_A 157 VWEHAYYIDHKNARPVYLEKF-YGHINWHFVSQCYEWAKKEGL 198 (213) T ss_dssp CSGGGTHHHHTTCHHHHHHHH-HHTBCHHHHHHHHHHHHHHTT T ss_pred HHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHHHHHHHCCC T ss_conf 567674987564699999999-974399999999999986387 No 15 >1b06_A Protein (superoxide dismutase); oxidoreductase; 2.20A {Sulfolobus acidocaldarius dsm 639} SCOP: a.2.11.1 d.44.1.1 PDB: 1wb8_A* 1wb7_A Probab=100.00 E-value=0 Score=489.71 Aligned_cols=198 Identities=34% Similarity=0.574 Sum_probs=178.2 Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH Q ss_conf 877999999865558646999999987328878998899985000233-2004578976410111455433222568999 Q gi|254780495|r 2 DFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEML-HLSLEEIIIKSHGSNAGLFNNASQYYNHNLF 80 (205) Q Consensus 2 ~~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~~-~~~l~~~~~~~~~~~~~~~nnagg~~nH~lf 80 (205) .|+||||||+|++|||+||++||++||+|||++||+++|+++++++.. ..++.+......+..+.+++|+|||+||+|| T Consensus 8 ~~~lp~LpY~~~~LeP~IS~~tl~~H~~kHh~~YV~~lN~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~~nH~~f 87 (210) T 1b06_A 8 RYEFPQLPYKVDALEPYISKDIIDVHYNGHHKGYVNGANSLLDRLEKLIKGDLPQGQYDLQGILRGLTFNINGHKLHAIY 87 (210) T ss_dssp CCCCCCCSSCTTTTTTTSCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSSCTTSCCHHHHHHHHHHHHHHHHHHHHH T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH T ss_conf 51489999884526551699999999999999999889888885899884888767987999987326521212278989 Q ss_pred HHHCCCCC-CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC--CCEEEEEECCCCCCCCCCCCCCEE Q ss_conf 85078888-876406899999974308999999999998620143431001034--101234431476754001478535 Q gi|254780495|r 81 WACMKKND-GKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK--NGKLEISKTQNAENPLINGAIPIL 157 (205) Q Consensus 81 f~~l~p~~-~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~--~~~L~i~~~~n~~~p~~~~~~PlL 157 (205) |+||+|++ ++++|++.|+++|+++|||+|+||++|+++|+++|||||||||++ +++|.|++++||++|++.+++||| T Consensus 88 w~~l~p~~~~~~~p~~~L~~~I~~~FGS~d~fk~~F~~~A~s~fGSGW~wL~~~~~~~~l~i~~~~n~~~~~~~~~~PlL 167 (210) T 1b06_A 88 WNNMAPAGKGGGKPGGALADLIDKQYGSFDRFKQVFSESANSLPGSGWTVLYYDNESGNLQIMTVENHFMNHIAELPVIL 167 (210) T ss_dssp HHTBCCTTTSCSCCCHHHHHHHHHHHSSHHHHHHHHHHHHHHCCSSEEEEEEECTTTCCEEEEEEETTTBSCCTTCCEEE T ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEE T ss_conf 86527888899999899999999980899999999999740687771589999889991754534789999775661179 Q ss_pred EEEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH Q ss_conf 6437687769875177499999998613598999999999997 Q gi|254780495|r 158 GIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAML 200 (205) Q Consensus 158 ~iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a~~ 200 (205) ||||||||||+||||+|++||++| |++|||++||+||++|+. T Consensus 168 ~iDvWEHAYylDY~n~R~~Yi~~~-~~~inW~~ve~r~~~a~~ 209 (210) T 1b06_A 168 IVDEFEHAYYLQYKNKRGDYLNAW-WNVVNWDDAEKRLQKYLN 209 (210) T ss_dssp EEECSGGGTHHHHTTCHHHHHHHH-GGGBCHHHHHHHHHTTTT T ss_pred EEEHHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHHHHHHC T ss_conf 887544453887555789999999-975099999999999864 No 16 >1dt0_A Superoxide dismutase; pseudomonas ovalis, oxidoreductase; 2.10A {Pseudomonas putida} SCOP: a.2.11.1 d.44.1.1 PDB: 3sdp_A Probab=100.00 E-value=0 Score=488.19 Aligned_cols=193 Identities=48% Similarity=0.913 Sum_probs=181.6 Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH Q ss_conf 87799999986555864699999998732887899889998500023320045789764101114554332225689998 Q gi|254780495|r 2 DFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSHGSNAGLFNNASQYYNHNLFW 81 (205) Q Consensus 2 ~~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~~~~~l~~~~~~~~~~~~~~~nnagg~~nH~lff 81 (205) ||+||||||+|++|||+||++||++||+|||++||++||+++++++.++.++.+++.. .+..+||++||++||+||| T Consensus 1 a~~Lp~Lpy~~~~LeP~iS~~t~~~H~~kh~~~YV~~lN~~~~~~~~~~~~~~~~~~~---~~~~~~n~~g~~~nH~~f~ 77 (197) T 1dt0_A 1 AFELPPLPYAHDALQPHISKETLEFHHDKHHNTYVVNLNNLVPGTEFEGKTLEEIVKT---SSGGIFNNAAQVWNHTFYW 77 (197) T ss_dssp CCCCCCCSSCTTTTTTTSCHHHHHHHHHTHHHHHHHHHHHHSTTSTTSSCCHHHHHHH---CCHHHHHHHHHHHHHHHHH T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHH---HHHHHHHHHHHHHHHHHHH T ss_conf 9989999888463657479999999999999999999999852416432787889887---6466664138899989998 Q ss_pred HHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC-CCEEEEEECCCCCCCCCCCCCCEEEEE Q ss_conf 5078888876406899999974308999999999998620143431001034-101234431476754001478535643 Q gi|254780495|r 82 ACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK-NGKLEISKTQNAENPLINGAIPILGID 160 (205) Q Consensus 82 ~~l~p~~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~-~~~L~i~~~~n~~~p~~~~~~PlL~iD 160 (205) ++|+|+ +++.|++.|+++|+++|||+|+|+++|+++|.++||||||||+.+ +++|.|+++.||++|++.+.+|||||| T Consensus 78 ~~l~p~-~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wL~~~~~~~l~i~~~~~~~~p~~~~~~PlL~lD 156 (197) T 1dt0_A 78 NCLSPN-AGGQPTGALADAINAAFGSFDKFKEEFTKTSVGTFGSGWGWLVKKADGSLALASTIGAGCPLTIGDTPLLTCD 156 (197) T ss_dssp HTBCSS-CCSCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCCSSEEEEEEECTTSCEEEEEEETTCCGGGGTCEEEEEEE T ss_pred HCCCCC-CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEE T ss_conf 356999-9998888999999988389999999999988730377289999889998887622578997663880358650 Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH Q ss_conf 768776987517749999999861359899999999999 Q gi|254780495|r 161 VWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAM 199 (205) Q Consensus 161 vWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a~ 199 (205) |||||||+||||+|++||++| |++|||++||+||++|+ T Consensus 157 vWEHAYyldY~n~r~~Yi~~~-~~~INW~~v~~r~~~a~ 194 (197) T 1dt0_A 157 VWEHAYYIDYRNLRPKYVEAF-WNLVNWAFVAEQFEGKT 194 (197) T ss_dssp CSGGGTHHHHTTCHHHHHHHH-TTTBCHHHHHHHHSSSC T ss_pred HHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHHHHHH T ss_conf 888887998654699999999-97519999999999866 No 17 >1p7g_A Superoxide dismutase; alpha-beta, oxidoreductase; 1.80A {Pyrobaculum aerophilum} SCOP: a.2.11.1 d.44.1.1 PDB: 3evk_A Probab=100.00 E-value=0 Score=486.38 Aligned_cols=200 Identities=34% Similarity=0.594 Sum_probs=182.6 Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH Q ss_conf 98779999998655586469999999873288789988999850002332004578976410111455433222568999 Q gi|254780495|r 1 MDFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSHGSNAGLFNNASQYYNHNLF 80 (205) Q Consensus 1 m~~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~~~~~l~~~~~~~~~~~~~~~nnagg~~nH~lf 80 (205) |.|+||||||+|++|||+||++||++||+||||+||++||+++++++..+.+..+++.. .....+.+|++|++||+|| T Consensus 16 ~kf~lp~LpY~~~~L~P~IS~eT~~~H~~kHh~~YV~~LN~~~~~~~~~~~~~~~~~i~--~~~~~~~~n~~g~~NH~~f 93 (222) T 1p7g_A 16 KRYTLPPLPYAYNALEPYISAEIMQLHHQKHHQGYVNGANAALEKLEKFRKGEAQIDIR--AVLRDLSFHLNGHILHSIF 93 (222) T ss_dssp CCCCCCCCSSCTTTTTTTSCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTSSCCCHH--HHHHHHHHHHHHHHHHHHH T ss_pred CCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHH--HHHHHHHHHHHHHHHHHHH T ss_conf 66108998788563500228999999999999999998999997538765364078899--9886577761037859999 Q ss_pred HHHCCCCC-CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC--CCEEEEEECCCCCCCCCCCCCCEE Q ss_conf 85078888-876406899999974308999999999998620143431001034--101234431476754001478535 Q gi|254780495|r 81 WACMKKND-GKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK--NGKLEISKTQNAENPLINGAIPIL 157 (205) Q Consensus 81 f~~l~p~~-~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~--~~~L~i~~~~n~~~p~~~~~~PlL 157 (205) |++|+|.+ ++++|++.|+++|+++|||+|+||++|+++|.++|||||||||++ +++|.|++++||++|++.+.+||| T Consensus 94 w~~l~p~~~~~~~P~~~L~~~I~~~FGS~d~fk~~f~~~a~~~fGSGWvwLv~d~~~~~l~i~~~~~~~~~~~~~~~PlL 173 (222) T 1p7g_A 94 WPNMAPPGKGGGKPGGKIADLINKFFGSFEKFKEEFSQAAKNVEGVGWAILVYEPLEEQLLILQIEKHNLMHAADAQVLL 173 (222) T ss_dssp TTTBCSBTTBSSCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCSSSEEEEEEEETTTTEEEEEEEETTTBSCCTTCEEEE T ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEE T ss_conf 98708545789999889999999985899999999988634677787025787188771433304678735578985799 Q ss_pred EEEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC Q ss_conf 6437687769875177499999998613598999999999997347 Q gi|254780495|r 158 GIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAMLAQK 203 (205) Q Consensus 158 ~iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a~~~~~ 203 (205) ||||||||||+||||+|++||++| |++|||++||+||++|+.++. T Consensus 174 ~lDvWEHAYylDY~n~r~~Yi~~~-~~~inW~~v~~r~~~A~~g~~ 218 (222) T 1p7g_A 174 ALDVWEHAYYLQYKNDRGSYVDNW-WNVVNWDDVERRLQKALNGQI 218 (222) T ss_dssp EEECSGGGTHHHHTTCHHHHHHHH-GGGBCHHHHHHHHHHHHTTBC T ss_pred EEECHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHHHHHHCCCC T ss_conf 983188650776465789999999-986199999999999985775 No 18 >1ma1_A Superoxide dismutase; metal specificity, azide inhibition, peroxide inactivation, oxidoreductase; 2.60A {Methanothermobacterthermautotrophicus} SCOP: a.2.11.1 d.44.1.1 Probab=100.00 E-value=0 Score=485.40 Aligned_cols=195 Identities=36% Similarity=0.638 Sum_probs=178.6 Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH Q ss_conf 87799999986555864699999998732887899889998500023320045789764101114554332225689998 Q gi|254780495|r 2 DFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSHGSNAGLFNNASQYYNHNLFW 81 (205) Q Consensus 2 ~~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~~~~~l~~~~~~~~~~~~~~~nnagg~~nH~lff 81 (205) .|+||||||+|++|||+||++||++||+||||+||++||+++++++.+..+..+++... ....+++|+|||+||+||| T Consensus 8 ~f~lp~LpY~~~~Lep~iS~~t~~~H~~kHh~~YV~~LN~~~~~~~~~~~~~~~~~~~~--~~~~~~~n~~g~~nH~~fw 85 (205) T 1ma1_A 8 FYELPELPYPYDALEPHISREQLTIHHQKHHQAYVDGANALLRKLDEARESDTDVDIKA--ALKELSFHVGGYVLHLFFW 85 (205) T ss_dssp CCCCCCCSSCTTTTTTTSCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTTCCCCHHH--HHHHHHHHHHHHHHHHHHH T ss_pred CEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH--HHHHHHHHHHCCHHHHHHH T ss_conf 01389998885646461699999999999999999989877565376533462889998--7678888871739999999 Q ss_pred HHCCCCC-CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC--CCEEEEEECCCCCCCCCCCCCCEEE Q ss_conf 5078888-876406899999974308999999999998620143431001034--1012344314767540014785356 Q gi|254780495|r 82 ACMKKND-GKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK--NGKLEISKTQNAENPLINGAIPILG 158 (205) Q Consensus 82 ~~l~p~~-~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~--~~~L~i~~~~n~~~p~~~~~~PlL~ 158 (205) ++|+|.+ ++++|++.|+++|+++|||+|+||++|+++|.++|||||||||++ +++|.|++++||++|++.+.+|||| T Consensus 86 ~~l~p~~~~~~~p~~~L~~~I~~~FGS~d~fk~~F~~~a~~~fGSGW~wLv~~~~~~~l~i~~~~n~~~p~~~~~~PlL~ 165 (205) T 1ma1_A 86 GNMGPADECGGEPSGKLAEYIEKDFGSFERFRKEFSQAAISAEGSGWAVLTYCQRTDRLFIMQVEKHNVNVIPHFRILLV 165 (205) T ss_dssp HTBCCTTTSCSCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCSSSEEEEEEEETTTTEEEEEEEETTTBSCCTTCCCSEE T ss_pred HCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEE T ss_conf 22386444689999899999998808999999999998972756853899885367832354036888886779767887 Q ss_pred EEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH Q ss_conf 43768776987517749999999861359899999999999 Q gi|254780495|r 159 IDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAM 199 (205) Q Consensus 159 iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a~ 199 (205) |||||||||+||||+|++||++| |++|||++||+||++|+ T Consensus 166 iDvWEHAYylDY~n~R~~Yv~~~-~~~inW~~v~~r~~~~~ 205 (205) T 1ma1_A 166 LDVWEHAYYIDYRNVRPDYVEAF-WNIVNWKEVEKRFEDIL 205 (205) T ss_dssp EECSGGGTHHHHTTCHHHHHHHH-TTTBCHHHHHHHHHTTC T ss_pred EEHHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHHHHHC T ss_conf 31445665887544689999999-98519999999999629 No 19 >1uer_A SOD, superoxide dismutase; metal-specific, cambialistic, oxidoreductase; 1.60A {Porphyromonas gingivalis} SCOP: a.2.11.1 d.44.1.1 PDB: 1qnn_A 1ues_A Probab=100.00 E-value=0 Score=482.39 Aligned_cols=190 Identities=47% Similarity=0.830 Sum_probs=178.3 Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH Q ss_conf 98779999998655586469999999873288789988999850002332004578976410111455433222568999 Q gi|254780495|r 1 MDFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSHGSNAGLFNNASQYYNHNLF 80 (205) Q Consensus 1 m~~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~~~~~l~~~~~~~~~~~~~~~nnagg~~nH~lf 80 (205) |+|+||+|||+|++|||+||++||++||++||+|||+++|+++++++....++.++.. ..+..+||++||++||+|| T Consensus 1 m~~~lp~LpY~~~~LeP~iS~~~l~~H~~kh~~gYV~~lN~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~NH~~f 77 (191) T 1uer_A 1 MTHELISLPYAVDALAPVISKETVEFHHGKHLKTYVDNLNKLIIGTEFENADLNTIVQ---KSEGGIFNNAGQTLNHNLY 77 (191) T ss_dssp CCCCCCCCSSCTTTTTTTTCHHHHHHHTTTHHHHHHHHHHHHTTTSTTTTCCHHHHHH---HCCHHHHHHHHHHHHHHHH T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH---HHHHHHHHHCCHHHHHHHH T ss_conf 9864899988845263505999999999999999999999999876775227888988---7527988601398899999 Q ss_pred HHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC-CCEEEEEECCCCCCCCCCCCCCEEEE Q ss_conf 85078888876406899999974308999999999998620143431001034-10123443147675400147853564 Q gi|254780495|r 81 WACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK-NGKLEISKTQNAENPLINGAIPILGI 159 (205) Q Consensus 81 f~~l~p~~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~-~~~L~i~~~~n~~~p~~~~~~PlL~i 159 (205) |++|+|+ +++.|++.|+++|+++|||+|+||++|+++|+++||||||||+.+ +++|.|++++||++|++.+++||||| T Consensus 78 ~~~l~p~-~~~~p~g~l~~~I~~~FGS~e~fk~~f~~~a~~~~GsGW~~L~~~~~~~l~i~~~~n~~~p~~~g~~PiL~l 156 (191) T 1uer_A 78 FTQFRPG-KGGAPKGKLGEAIDKQFGSFEKFKEEFNTAGTTLFGSGWVWLASDANGKLSIEKEPNAGNPVRKGLNPLLGF 156 (191) T ss_dssp HHTBCTT-CCSCCCHHHHHHHHHHHSSHHHHHHHHHHHHHHCCSSEEEEEEECTTCCEEEEEEETTCCGGGGTCEEEEEE T ss_pred HHHCCCC-CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEE T ss_conf 8613889-999998899999998828999999999999832777629999987999789998359888724687443764 Q ss_pred EHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH Q ss_conf 376877698751774999999986135989999999 Q gi|254780495|r 160 DVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERY 195 (205) Q Consensus 160 DvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~ 195 (205) ||||||||+||||+|++||++| |++|||++||+|| T Consensus 157 DvWEHAYylDY~n~r~~Yi~~f-~~~InW~~V~~Ry 191 (191) T 1uer_A 157 DVWEHAYYLTYQNRRADHLKDL-WSIVDWDIVESRY 191 (191) T ss_dssp ECSGGGTHHHHTTCHHHHHHHH-GGGBCHHHHHHHC T ss_pred EHHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHC T ss_conf 1557888988644789999999-8650999998629 No 20 >2nyb_A Superoxide dismutase [FE]; iron superoxide dismutase Q69E, fesod, oxidoreductase; 1.10A {Escherichia coli} SCOP: a.2.11.1 d.44.1.1 PDB: 2bkb_A 1isa_A 1isb_A 1isc_A 1za5_A 2w7w_A Probab=100.00 E-value=0 Score=480.77 Aligned_cols=191 Identities=45% Similarity=0.861 Sum_probs=179.2 Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH Q ss_conf 87799999986555864699999998732887899889998500023320045789764101114554332225689998 Q gi|254780495|r 2 DFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSHGSNAGLFNNASQYYNHNLFW 81 (205) Q Consensus 2 ~~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~~~~~l~~~~~~~~~~~~~~~nnagg~~nH~lff 81 (205) .|+||||||+|++|||+||++||++||+|||++||+++|+++++++.++.++.+++.. .+..++||+|||+||+||| T Consensus 1 sf~Lp~LpY~~~~LeP~iS~~~~~~H~~kh~~~YV~~lN~~~~~~~~~~~~~~~~~~~---~~~~~~n~~gg~~nH~~f~ 77 (192) T 2nyb_A 1 SFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRS---SEGGVFNNAAEVWNHTFYW 77 (192) T ss_dssp CCCCCCCSSCTTTTTTTSCHHHHHHHHHTHHHHHHHHHHHHHTTSTTTTCCHHHHHTT---CCHHHHHHHHHHHHHHHHH T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH---HHHHCCCHHHHHHHHHHHH T ss_conf 9979999898564667379999999999999999999999965057626888999976---3121241066799999998 Q ss_pred HHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC-CCEEEEEECCCCCCCCCCCCCCEEEEE Q ss_conf 5078888876406899999974308999999999998620143431001034-101234431476754001478535643 Q gi|254780495|r 82 ACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK-NGKLEISKTQNAENPLINGAIPILGID 160 (205) Q Consensus 82 ~~l~p~~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~-~~~L~i~~~~n~~~p~~~~~~PlL~iD 160 (205) +||+|++ ++.|++.|+++|+++|||+|+||++|+++|+++|||||+||+.+ +++|.|+++.||++|++.+.+|||||| T Consensus 78 ~~l~p~~-~~~p~g~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wL~~~~~~~l~~~~~~n~~~p~~~~~~PiL~iD 156 (192) T 2nyb_A 78 NCLAPNA-GGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVD 156 (192) T ss_dssp HTBCTTC-CSCCCHHHHHHHHHHHSSHHHHHHHHHHHHHHCCSSEEEEEEECTTSCEEEEEEETTCCGGGSSCEEEEEEE T ss_pred HHCCCCC-CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEEE T ss_conf 0218999-999898999999998299999999999998467866799988704674589862378787557972179752 Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHH Q ss_conf 7687769875177499999998613598999999999 Q gi|254780495|r 161 VWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYET 197 (205) Q Consensus 161 vWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~ 197 (205) |||||||+||||+|++||++| |++|||++||+||.+ T Consensus 157 vWEHAYyldY~n~R~~Yi~~f-~~~iNW~~v~~R~~a 192 (192) T 2nyb_A 157 VWEHAYYIDYRNARPGYLEHF-WALVNWEFVAKNLAA 192 (192) T ss_dssp CSGGGTHHHHTTCHHHHHHHH-HTTBCHHHHHHHHHC T ss_pred HHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHHCC T ss_conf 677887988554799999999-963199999876359 No 21 >3bfr_A Superoxide dismutase [MN]; alpha/beta fold, manganese, metal-binding, mitochondrion, oxidoreductase, transit peptide; 2.05A {Saccharomyces cerevisiae} Probab=100.00 E-value=0 Score=483.21 Aligned_cols=196 Identities=29% Similarity=0.563 Sum_probs=172.0 Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH-----HHHHCCCHHHHHHHHHHHHH Q ss_conf 7799999986555864699999998732887899889998500023320045789-----76410111455433222568 Q gi|254780495|r 3 FKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEII-----IKSHGSNAGLFNNASQYYNH 77 (205) Q Consensus 3 ~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~nnagg~~nH 77 (205) |+||||||+|+||||+||++||++||+||||+||++||+++++++.....+...+ ....+.+..++||+||++|| T Consensus 10 ~~Lp~LpY~~~aLeP~IS~~t~~~H~~kHh~~YV~~lN~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~nagg~~NH 89 (215) T 3bfr_A 10 VTLPDLKWDFGALEPYISGQINELHYTKHHQTYVNGFNTAVDQFQELSDLLAKEPSPANARKMIAIQQNIKFHGGGFTNH 89 (215) T ss_dssp CCCCCCCSCGGGGTTTSCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH T ss_pred EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHH T ss_conf 11899988845253206899999999999999999999999974766656654320220556688988754002205679 Q ss_pred HHHHHHCCCCC--CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC---CCEEEEEECCCCCCCCCCC Q ss_conf 99985078888--876406899999974308999999999998620143431001034---1012344314767540014 Q gi|254780495|r 78 NLFWACMKKND--GKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK---NGKLEISKTQNAENPLING 152 (205) Q Consensus 78 ~lff~~l~p~~--~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~---~~~L~i~~~~n~~~p~~~~ 152 (205) +|||+||+|.+ ++++|++.|+++|+++|||+|+|+++|.++|+++|||||||||++ .++|.|+++.||+ |+..+ T Consensus 90 ~~fw~~L~p~~~~~~~~P~g~L~~aI~~~FGS~d~fk~~f~~aA~~~fGsGWvwLv~d~~~~~~l~~~~~~n~~-~~~~~ 168 (215) T 3bfr_A 90 CLFWENLAPESQGGGEPPTGALAKAIDEQFGSLDELIKLTNTKLAGVQGSGWAFIVKNLSNGGKLDVVQTYNQD-TVTGP 168 (215) T ss_dssp HHHHHTBCCGGGTTTCCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCCSSEEEEEEEETTTTSEEEEEEEETTC-CCCTT T ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCC-CCCCC T ss_conf 99999749877899989988999999998588899999998775337776489998725557634788778999-77778 Q ss_pred CCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH Q ss_conf 785356437687769875177499999998613598999999999997 Q gi|254780495|r 153 AIPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAML 200 (205) Q Consensus 153 ~~PlL~iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a~~ 200 (205) .+|||||||||||||+||||+|++||++| |++|||++||+||++|.+ T Consensus 169 ~~Pll~~DvwEHAYy~dY~n~R~~Yi~~f-~~~inW~~v~~r~~~ak~ 215 (215) T 3bfr_A 169 LVPLVAIDAWEHAYYLQYQNKKADYFKAI-WNVVNWKEASRRFDAGKI 215 (215) T ss_dssp EEEEEEEECSGGGTHHHHTTCHHHHHHHG-GGGBCHHHHHHHHHHC-- T ss_pred CCCEEEEEHHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHHHHCCC T ss_conf 82257642225677987544699999999-863199999999986449 No 22 >2awp_A Iron super-oxide dismutase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.00A {Plasmodium knowlesi} PDB: 2bpi_A 2a03_A 2goj_A Probab=100.00 E-value=0 Score=479.40 Aligned_cols=196 Identities=40% Similarity=0.785 Sum_probs=180.0 Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH Q ss_conf 98779999998655586469999999873288789988999850002332004578976410111455433222568999 Q gi|254780495|r 1 MDFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSHGSNAGLFNNASQYYNHNLF 80 (205) Q Consensus 1 m~~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~~~~~l~~~~~~~~~~~~~~~nnagg~~nH~lf 80 (205) |+|+||||||+|++|||+||++||++||+|||+|||++||+++++++.++.++.+++. .....+||++||++||++| T Consensus 1 m~~~Lp~L~y~~~~Lep~iS~~tl~~H~~kh~~gYV~~lN~~~~~~~~~~~~~~~~~~---~~~~~~~n~~g~~~nH~~f 77 (198) T 2awp_A 1 MAIILPKLKYALNALSPHISEETLNFHYNKHHAGYVNKLNGLIKDTPFATKSLVEIMK---ESTGAIFNNAAQIWNHSFY 77 (198) T ss_dssp CCSCCCCCSSCTTTTTTTSCHHHHHHHHHTHHHHHHHHHHHHHTTSGGGGSCHHHHHH---HCCHHHHHHHHHHHHHHHH T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH T ss_conf 9740899989856365737999999999999999999999987540165555898887---7655355315699999999 Q ss_pred HHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC-CCEEEEEECCCCCCCCCC-CCCCEEE Q ss_conf 85078888876406899999974308999999999998620143431001034-101234431476754001-4785356 Q gi|254780495|r 81 WACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK-NGKLEISKTQNAENPLIN-GAIPILG 158 (205) Q Consensus 81 f~~l~p~~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~-~~~L~i~~~~n~~~p~~~-~~~PlL~ 158 (205) |++|+|++ +++|++.|+++|+++|||+|+|+++|+++|.++|||||+|||++ ++++.++.+.++++|++. +.+|||| T Consensus 78 ~~~l~p~~-~~~p~g~l~~~I~~~FGS~d~fk~~f~~~A~~~~GSGW~wL~~~~~~~~~~~~~~~~~~~~~~~~~~PlL~ 156 (198) T 2awp_A 78 WDSMGPNC-GGEPHGEIKEKIQEDFGSFNNFKNEFSNVLCGHFGSGWGWLVLNNNNKLVILQTHDAGNPIKDNTGIPILT 156 (198) T ss_dssp HHTBCTTC-CSSCCTHHHHHHHHHHSSHHHHHHHHHHHHHHCCSSEEEEEEEETTSCEEEEEEETTCCHHHHTSEEEEEE T ss_pred HHCCCCCC-CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEE T ss_conf 96338889-99877799999999849999999999998745566649999994789868986147898766688774587 Q ss_pred EEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH Q ss_conf 4376877698751774999999986135989999999999973 Q gi|254780495|r 159 IDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAMLA 201 (205) Q Consensus 159 iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a~~~ 201 (205) |||||||||+||||+|++||++| |++|||++||+||++|+++ T Consensus 157 lDvWEHAYylDY~n~r~~Yi~~f-~~~inW~~v~~R~~~a~~~ 198 (198) T 2awp_A 157 CDIWEHAYYIDYRNDRPSYVKAW-WNLVNWNFANENLKKALQK 198 (198) T ss_dssp EECSGGGTHHHHTTCHHHHHHHH-TTTBCHHHHHHHHHHHHC- T ss_pred EEHHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHHHHHHCC T ss_conf 61456786988653699999999-9863999999999998629 No 23 >1pl4_A Superoxide dismutase [MN], mitochondrial; oxidoreductase; 1.47A {Homo sapiens} SCOP: a.2.11.1 d.44.1.1 PDB: 1n0j_A 1luv_A 1msd_A 2adq_B 1pm9_A 3c3t_A 1ap6_A 1ap5_A 1var_A 3c3s_A 1em1_A 1qnm_A 1zte_A 1luw_A 2gds_A 1zuq_A 2adp_A* 1zsp_A 1n0n_A 2p4k_A ... Probab=100.00 E-value=0 Score=480.21 Aligned_cols=195 Identities=36% Similarity=0.687 Sum_probs=172.1 Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH Q ss_conf 87799999986555864699999998732887899889998500023320045789764101114554332225689998 Q gi|254780495|r 2 DFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSHGSNAGLFNNASQYYNHNLFW 81 (205) Q Consensus 2 ~~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~~~~~l~~~~~~~~~~~~~~~nnagg~~nH~lff 81 (205) .|+||||||+|+||||+||++||++||+|||++||++||++.++++....... .......+..++||+|||+||+||| T Consensus 1 kh~Lp~LpY~~~aLeP~is~~t~~~H~~khh~~YV~~LN~~~~~~~~~~~~~~--~~~~~~~~~~~~~n~~g~~NH~~fw 78 (198) T 1pl4_A 1 KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGD--VTAQIALQPALKFNGGGHINHSIFW 78 (198) T ss_dssp CCCCCCCSSCTTTTTTTSCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTTC--HHHHHHTHHHHHHHHHHHHHHHHHH T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHCCCHHHHHHHHHH T ss_conf 99999999884536662799999999999999999989999861498760671--5656664033202221457679887 Q ss_pred HHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC--CCEEEEEECCCCCCCC-CCCCCCEEE Q ss_conf 5078888876406899999974308999999999998620143431001034--1012344314767540-014785356 Q gi|254780495|r 82 ACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK--NGKLEISKTQNAENPL-INGAIPILG 158 (205) Q Consensus 82 ~~l~p~~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~--~~~L~i~~~~n~~~p~-~~~~~PlL~ 158 (205) +||+|++ ++.|++.|+++|+++|||+|+||++|+++|+++|||||||||++ +++|.+..+.+++.+. ..+++|||| T Consensus 79 ~~l~p~~-~~~p~g~L~~~I~~~FGS~d~fk~~F~~~a~~~fGSGW~wLv~d~~~~~l~~~~~~~~~~~~~~~~~~PlL~ 157 (198) T 1pl4_A 79 TNLSPNG-GGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLG 157 (198) T ss_dssp HTBCTTC-CSCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCCSSEEEEEEEETTTTEEEEEEEETTCCHHHHHCCEEEEE T ss_pred HCCCCCC-CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEE T ss_conf 4368999-999998999999998389999999999987515776489999988999278862367888766567731576 Q ss_pred EEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH Q ss_conf 437687769875177499999998613598999999999997 Q gi|254780495|r 159 IDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAML 200 (205) Q Consensus 159 iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a~~ 200 (205) |||||||||+||||+|++||++| |++|||++||+||++|.+ T Consensus 158 lDvWEHAYylDY~n~R~~Yi~~~-~~~iNW~~v~~r~~~a~~ 198 (198) T 1pl4_A 158 IDVWEHAYFLQYKNVRPDYLKAI-WNVINWENVTERYMACKK 198 (198) T ss_dssp EECSGGGTHHHHTTCHHHHHHHH-GGGBCHHHHHHHHHHTTC T ss_pred EEHHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHHHHHCC T ss_conf 30545675987545689999999-863099999999998519 No 24 >1kkc_A Mnsod, manganese superoxide dismutase; homotetramer, oxidoreductase; 2.00A {Aspergillus fumigatus} SCOP: a.2.11.1 d.44.1.1 Probab=100.00 E-value=0 Score=479.73 Aligned_cols=200 Identities=32% Similarity=0.613 Sum_probs=171.6 Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH Q ss_conf 98779999998655586469999999873288789988999850002332004578976410111455433222568999 Q gi|254780495|r 1 MDFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSHGSNAGLFNNASQYYNHNLF 80 (205) Q Consensus 1 m~~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~~~~~l~~~~~~~~~~~~~~~nnagg~~nH~lf 80 (205) +.|+||||||+|++|||+||++||++||+||||+||++||+++++++......... .....+..++||+|||+||+|| T Consensus 14 ~~f~Lp~LpY~~~~LeP~IS~~t~~~H~~kHh~~YV~~LN~~~~~~~~~~~~~~~~--~~~~~~~~~~~n~~g~~NH~~f 91 (221) T 1kkc_A 14 QQYTLPPLPYPYDALQPYISQQIMELHHKKHHQTYVNGLNAALEAQKKAAEATDVP--KLVSVQQAIKFNGGGHINHSLF 91 (221) T ss_dssp CCCCCCCCSSCTTTTTTTSCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHHHHHHHHHHHH T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHH--HHHHHHHHHHHCCHHHHHHHHH T ss_conf 77548999888563544169999999999999999999999996574555135188--8877677877331078889999 Q ss_pred HHHCCCCC---CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCEE Q ss_conf 85078888---876406899999974308999999999998620143431001034101234431476754001478535 Q gi|254780495|r 81 WACMKKND---GKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVKNGKLEISKTQNAENPLINGAIPIL 157 (205) Q Consensus 81 f~~l~p~~---~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~~~~L~i~~~~n~~~p~~~~~~PlL 157 (205) |++|+|++ ++..|++.|+++|+++|||+|+|+++|+++|+++|||||||||+++.+..++.+..+++|.+.+++||| T Consensus 92 w~~l~p~~~~~~~~~p~~~L~~~I~~~FGS~d~fk~~F~~~a~~~fGSGWvwLv~d~~~~~l~~~~~~~~~~~~~~~PlL 171 (221) T 1kkc_A 92 WKNLAPEKSGGGKIDQAPVLKAAIEQRWGSFDKFKDAFNTTLLGIQGSGWGWLVTDGPKGKLDITTTHDQDPVTGAAPVF 171 (221) T ss_dssp HHTBCCGGGTBTCGGGCHHHHHHHHHHHSSHHHHHHHHHHHHHHCCSSEEEEEEESSTTCCEEEEEEETTCCCCSSEEEE T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEECCCCCCCCCCCCEEEE T ss_conf 98628876789999976999999998609999999999997637774379999998999956544688998012985355 Q ss_pred EEEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC Q ss_conf 6437687769875177499999998613598999999999997347 Q gi|254780495|r 158 GIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAMLAQK 203 (205) Q Consensus 158 ~iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a~~~~~ 203 (205) ||||||||||+||||+|++||++| ||+|||++||+||.+|..+.. T Consensus 172 ~iDvWEHAYylDY~n~R~~Yi~~~-~~~INW~~Ve~r~~~a~~g~~ 216 (221) T 1kkc_A 172 GVDMWEHAYYLQYLNDKASYAKGI-WNVINWAEAENRYIAGDKGGH 216 (221) T ss_dssp EEECSGGGTHHHHTTCHHHHHHHH-GGGBBHHHHHHHHHHTCC--- T ss_pred EEEHHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHHHHHHHCCC T ss_conf 420446777988634699999999-874099999999999982588 No 25 >3kky_A Mnsod, superoxide dismutase [MN]; manganese, ME binding, oxidoreductase, metal binding protein; 1.80A {Deinococcus radiodurans} PDB: 2cdy_A 2ce4_A 1y67_A 2aw9_A Probab=100.00 E-value=0 Score=476.96 Aligned_cols=198 Identities=45% Similarity=0.867 Sum_probs=183.1 Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH----HCCCHHHHHHHHHHHH Q ss_conf 987799999986555864699999998732887899889998500023320045789764----1011145543322256 Q gi|254780495|r 1 MDFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKS----HGSNAGLFNNASQYYN 76 (205) Q Consensus 1 m~~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~~~~~l~~~~~~~----~~~~~~~~nnagg~~n 76 (205) |+|+||||||+|++|||+||++||++||+|||+|||++||+++++++..+.+.++++... ...+..++|++||++| T Consensus 1 m~~~lp~Lpy~~~~Lep~iS~~tl~~H~~kh~~gYV~~lN~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~n 80 (211) T 3kky_A 1 MAYTLPQLPYAYDALEPHIDARTMEIHHTKHHQTYVDNANKALEGTEFADLPVEQLIQQLDRVPADKKGALRNNAGGHAN 80 (211) T ss_dssp -CCCCCCCSSCTTTTTTTSCHHHHHHHHHTHHHHHHHHHHHHHTTSTTTTSCHHHHTTCTTTSCGGGHHHHHHHHHHHHH T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHH T ss_conf 98869999898564655169999999999999999999999986468865058888877763427678999998789988 Q ss_pred HHHHHHHCCCCC---CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCCC-- Q ss_conf 899985078888---876406899999974308999999999998620143431001034101234431476754001-- Q gi|254780495|r 77 HNLFWACMKKND---GKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVKNGKLEISKTQNAENPLIN-- 151 (205) Q Consensus 77 H~lff~~l~p~~---~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~~~~L~i~~~~n~~~p~~~-- 151 (205) |++||++|+|+. +++.|++.|+++|+++|||+|+||++|+++|+++||||||||++++++|.|++|.||++|++. T Consensus 81 h~~f~~~l~p~~~~~~~~~~~~~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~~L~~~~~~L~i~~~~~~~~p~~~~~ 160 (211) T 3kky_A 81 HSMFWQIMGQGQGQNGANQPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAWLVVKDGKLDVVSTANQDNPLMGEA 160 (211) T ss_dssp HHHHHHTBCC------CCCCCHHHHHHHHHHHSSHHHHHHHHHHHHHHCCSSEEEEEEEETTEEEEEEEETTCCGGGCHH T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCC T ss_conf 99999863765689899999889999999982898999999999876476463899981599689998325458620244 Q ss_pred ----CCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH Q ss_conf ----478535643768776987517749999999861359899999999999 Q gi|254780495|r 152 ----GAIPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAM 199 (205) Q Consensus 152 ----~~~PlL~iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a~ 199 (205) +.+|||||||||||||+||||+|++||++| |++|||++||+||++|. T Consensus 161 ~~~~~~~Pll~lD~wEHAYy~DY~~~r~~Yi~~~-~~~inW~~v~~r~~~A~ 211 (211) T 3kky_A 161 IAGVSGTPILGVDVWEHAYYLNYQNRRPDYLAAF-WNVVNWDEVSKRYAAAK 211 (211) T ss_dssp HHSCCSEEEEEEECSGGGTHHHHTTCHHHHHHHH-GGGBCHHHHHHHHHHHC T ss_pred CCCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHHHHCC T ss_conf 3467851687512777888998654689999999-97539999999999667 No 26 >3lio_A Iron superoxide dismutase; cold adaptation, flexibility, thermal stability, psychrophilic protein, metal-binding, oxidoreduc; HET: TRE; 1.50A {Pseudoalteromonas haloplanktis} PDB: 3lj9_A* 3ljf_A* 3sdp_A Probab=100.00 E-value=0 Score=472.65 Aligned_cols=189 Identities=44% Similarity=0.873 Sum_probs=175.0 Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH Q ss_conf 87799999986555864699999998732887899889998500023320045789764101114554332225689998 Q gi|254780495|r 2 DFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSHGSNAGLFNNASQYYNHNLFW 81 (205) Q Consensus 2 ~~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~~~~~l~~~~~~~~~~~~~~~nnagg~~nH~lff 81 (205) ||+||||||+|+||||+||++||++||+||||+||+++|+++++++.++.++.+++. ..+..+|||+|||+||+||| T Consensus 1 a~~Lp~LpY~~~~LeP~iS~~t~~~H~~khh~~YV~~lN~~~~~~~~~~~~~~~~~~---~~~~~~~nn~g~~~nH~~f~ 77 (192) T 3lio_A 1 AFELPSLPYAIDALEPHISKETLEFHHGKHHNTYVVKLNGLIPGTKFENKSLEEIVC---SSDGGVFNNAAQIWNHTFYW 77 (192) T ss_dssp CCCCCCCSSCTTTTTTTSCHHHHHHHTTTHHHHHHHHHHHHCTTSTTTTSCHHHHHT---TCCHHHHHHHHHHHHHHHHH T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH---HHHHHHHHHHHHHHHHHHHH T ss_conf 998999989846365627999999999999999999998875246776317899988---64255663126899999999 Q ss_pred HHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC-CCEEEEEECCCCCCCCC-CCCCCEEEE Q ss_conf 5078888876406899999974308999999999998620143431001034-10123443147675400-147853564 Q gi|254780495|r 82 ACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK-NGKLEISKTQNAENPLI-NGAIPILGI 159 (205) Q Consensus 82 ~~l~p~~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~-~~~L~i~~~~n~~~p~~-~~~~PlL~i 159 (205) ++|+|+ +++.|++.|.++|+++|||+|+||++|+++|.++|||||+||+.+ ++++.++.+.++++|++ .+.+||||| T Consensus 78 ~~l~p~-~~~~P~~~l~~~I~~~FGS~d~fk~~F~~~a~~~~GsGW~wL~~~~~~~~~~~~~~~~~~~~~~~~~~PlL~l 156 (192) T 3lio_A 78 NSLSPN-GGGAPTGAVADAINAKWGSFDAFKEALNDKAVNNFGSSWTWLVKLADGSLDIVNTSNAATPLTDDGVTPILTV 156 (192) T ss_dssp HTBCTT-CCSSCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCCSSEEEEEEECTTSCEEEEEEETTCCGGGSTTCEEEEEE T ss_pred HHCCCC-CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEEE T ss_conf 722889-9999988999999998478999999999987622146548999726873578875168787655786316875 Q ss_pred EHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH Q ss_conf 376877698751774999999986135989999999 Q gi|254780495|r 160 DVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERY 195 (205) Q Consensus 160 DvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~ 195 (205) ||||||||+||||+|++||++| |++|||++|++|| T Consensus 157 DvWEHAYyldY~n~R~~Yi~~f-~~~InW~~v~~R~ 191 (192) T 3lio_A 157 DLWEHAYYIDYRNVRPDYLKGF-WSLVNWEFANANF 191 (192) T ss_dssp ECSGGGTHHHHTTCHHHHHHHH-HHHBCHHHHHHHH T ss_pred EHHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHC T ss_conf 2446787998544689999999-9863998999754 No 27 >3dc5_A Superoxide dismutase [MN] 2; alpha hairpin N domain, alpha/beta C domain, oxidoreductase, manganese, metal-binding, mitochondrion; 1.70A {Caenorhabditis elegans} PDB: 3dc6_A Probab=100.00 E-value=0 Score=468.58 Aligned_cols=193 Identities=34% Similarity=0.708 Sum_probs=168.9 Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH Q ss_conf 98779999998655586469999999873288789988999850002332004578976410111455433222568999 Q gi|254780495|r 1 MDFKLPNLPYSYDDLSPYMSKETLEYHHDVHHKNYADNALKLASDAEMLHLSLEEIIIKSHGSNAGLFNNASQYYNHNLF 80 (205) Q Consensus 1 m~~~Lp~Lpy~~~aLeP~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~~~~~l~~~~~~~~~~~~~~~nnagg~~nH~lf 80 (205) |.|+||||||+|++|||+||++||++||++|||+||+++|+++++... .... ..+......+..++||+||++||++| T Consensus 1 m~~~Lp~Lpy~~~~L~p~iS~~t~~~H~~kh~~~YV~~lN~~~~~~~~-~~~~-~~~~~~~~~~~~~~~n~~g~~nH~~y 78 (195) T 3dc5_A 1 MKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHE-AVSK-GNLKEAIALQPALKFNGGGHINHSIF 78 (195) T ss_dssp -CCCCCCCSSCTTTTTTTSCHHHHHHHHHTHHHHHHHHHHHHHHHHHH-HHHH-TCHHHHHHTHHHHHHHHHHHHHHHHH T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH-HHHC-CCHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 987689999984526552799999999999999999887665313177-7736-75888887606753103638889999 Q ss_pred HHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC--CCEEEEEECCCCCCCCCCCCCCEEE Q ss_conf 85078888876406899999974308999999999998620143431001034--1012344314767540014785356 Q gi|254780495|r 81 WACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK--NGKLEISKTQNAENPLINGAIPILG 158 (205) Q Consensus 81 f~~l~p~~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~--~~~L~i~~~~n~~~p~~~~~~PlL~ 158 (205) |++|+|+ ++.|++.|+++|+++|||+|+||++|+++|+++|||||||||++ +++|.|+++.|++ |+ .+.+|||| T Consensus 79 ~~~l~~~--~~~p~~~l~~~I~~~FGS~d~fk~~f~~~a~~~fGsGW~wLv~~~~~~~l~~~~~~~~~-~~-~~~~PlL~ 154 (195) T 3dc5_A 79 WTNLAKD--GGEPSKELMDTIKRDFGSLDNLQKRLSDITIAVQGSGWGWLGYCKKDKILKIATCANQD-PL-EGMVPLFG 154 (195) T ss_dssp HHTBCSS--CCCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCCSSEEEEEEEETTTTEEEEEEEETTC-CC-CSSEEEEE T ss_pred HCCCCCC--CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCC-CC-CCCCCEEE T ss_conf 6722579--99998699999999818999999999998731356637999997899979984179999-76-79867455 Q ss_pred EEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH Q ss_conf 437687769875177499999998613598999999999997 Q gi|254780495|r 159 IDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAML 200 (205) Q Consensus 159 iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a~~ 200 (205) |||||||||+||||+|++||++| ||+|||++|++||++|.+ T Consensus 155 iDvWEHAYylDY~n~R~~Yi~~f-~~~iNW~~V~~r~~~A~~ 195 (195) T 3dc5_A 155 IDVWEHAYYLQYKNVRPDYVHAI-WKIANWKNISERFANARQ 195 (195) T ss_dssp EECSGGGTHHHHTTCHHHHHHHH-GGGBCHHHHHHHHHHHHC T ss_pred EHHHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHHHHHCC T ss_conf 31666776998644699999999-961199999999998529 No 28 >2gpc_A Iron superoxide dismutase; alpha+beta structure, oxidoreductase; 1.90A {Trypanosoma cruzi} PDB: 3esf_A Probab=100.00 E-value=0 Score=455.89 Aligned_cols=189 Identities=40% Similarity=0.775 Sum_probs=168.4 Q ss_pred CCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH Q ss_conf 8779999998655586-46999999987328878998899985000-233200457897641011145543322256899 Q gi|254780495|r 2 DFKLPNLPYSYDDLSP-YMSKETLEYHHDVHHKNYADNALKLASDA-EMLHLSLEEIIIKSHGSNAGLFNNASQYYNHNL 79 (205) Q Consensus 2 ~~~Lp~Lpy~~~aLeP-~IS~~tl~~Hy~kHh~~YV~~lN~~~~~~-~~~~~~l~~~~~~~~~~~~~~~nnagg~~nH~l 79 (205) -|+||||||+|++||| +||++||++||+|||||||+++|+++++. +....++.++. ...+..+||++|+++||+| T Consensus 1 ~~~lp~Lpy~~~~LeP~~iS~~tl~~H~~kh~~gYV~~lN~~~~~~~~~~~~~~~~~~---~~~~~~~fn~~g~~~nh~~ 77 (194) T 2gpc_A 1 MFSIPPLPWGYDGLAAKGLSKQQVTLHYDKHHQGYVTKLNAAAQTNSALATKSIEEII---RTEKGPIFNLAAQIFNHTF 77 (194) T ss_dssp CCCCCCCSSCTTTTGGGTCCHHHHHHHHHTHHHHHHHHHHHHHHSCGGGGGSCHHHHH---HHCCHHHHHHHHHHHHHHH T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH---HHCCHHHHHCCCCHHHHHH T ss_conf 9758999988345785773999999999999999999999987750776624546666---6300133222654255678 Q ss_pred HHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC--CCEEEEEECCCCCCCCCC-CCCCE Q ss_conf 985078888876406899999974308999999999998620143431001034--101234431476754001-47853 Q gi|254780495|r 80 FWACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK--NGKLEISKTQNAENPLIN-GAIPI 156 (205) Q Consensus 80 ff~~l~p~~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~--~~~L~i~~~~n~~~p~~~-~~~Pl 156 (205) ||++|+|+ +++.|++.|+++|+++|||+|+||++|+++|+++||||||||+++ +++|.|+++.||++|++. +.+|| T Consensus 78 f~~~~~p~-~~~~p~g~l~~~I~~~FGS~d~fk~~f~~~a~~~~GSGW~wL~~~~~~~~l~i~~~~n~~~p~~~~~~~Pl 156 (194) T 2gpc_A 78 YWESMCPN-GGGEPTGKVADEINASFGSFAKFKEEFTNVAVGHFGSGWAWLVKDTNSGKLKVYQTHDAGCPLTEPNLKPL 156 (194) T ss_dssp HHHTBCTT-CCSCCCHHHHHHHHHHHSSHHHHHHHHHHHHHHCCSSEEEEEEEETTTTEEEEEEEETTCCGGGSTTEEEE T ss_pred HHHHCCCC-CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCEEE T ss_conf 87504888-99999989999999983688999999999866787665999999677883102532576897556765411 Q ss_pred EEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH Q ss_conf 564376877698751774999999986135989999999 Q gi|254780495|r 157 LGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERY 195 (205) Q Consensus 157 L~iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~ 195 (205) |||||||||||+||||+|++||++| |++|||++||+|+ T Consensus 157 l~lD~wEHAYyldy~n~r~~Yi~~~-~~~inW~~ve~Rl 194 (194) T 2gpc_A 157 LTCDVWEHAYYVDYKNDRAAYVQTF-WNVVNWKNVERQL 194 (194) T ss_dssp EEEECSGGGTHHHHTTCHHHHHHHH-HHHBCHHHHHHHC T ss_pred EEEHHHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHCC T ss_conf 4420878887988643689999999-9751999998419 No 29 >1coj_A Protein (superoxide dismutase); oxidoreductase; 1.90A {Aquifex pyrophilus} SCOP: a.2.11.1 d.44.1.1 Probab=100.00 E-value=0 Score=424.30 Aligned_cols=194 Identities=28% Similarity=0.470 Sum_probs=163.3 Q ss_pred CCCCCCCCCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHCCHHH---HHHHHHHHHHH-HHCCCHHHHHHHHH Q ss_conf 87799999986555864----699999998732887899889998500023---32004578976-41011145543322 Q gi|254780495|r 2 DFKLPNLPYSYDDLSPY----MSKETLEYHHDVHHKNYADNALKLASDAEM---LHLSLEEIIIK-SHGSNAGLFNNASQ 73 (205) Q Consensus 2 ~~~Lp~Lpy~~~aLeP~----IS~~tl~~Hy~kHh~~YV~~lN~~~~~~~~---~~~~l~~~~~~-~~~~~~~~~nnagg 73 (205) .|+|||++ +|+|. ||++||++||+|||||||++||++++++.. .+.+....+.. ....+..+.+|+|| T Consensus 2 ~~~l~p~d----~l~p~~l~~IS~~tm~~H~~kHh~~YV~~lN~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fN~~g 77 (212) T 1coj_A 2 VHKLEPKD----HLKPQNLEGISNEQIEPHFEAHYKGYVAKYNEIQEKLADQNFADRSKANQNYSEYRELKVEETFNYMG 77 (212) T ss_dssp CCCCCCCG----GGCCCSCSSSCHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTTTCGGGCCSSSCHHHHHHHHHHHHHHH T ss_pred CCCCCCCC----CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCC T ss_conf 87879887----57878753550999999999889999999999997063433110456744367665665788763354 Q ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC--CCEEEEEECCCCCCCCCC Q ss_conf 256899985078888876406899999974308999999999998620143431001034--101234431476754001 Q gi|254780495|r 74 YYNHNLFWACMKKNDGKGKVPQALSDAIDDNFGSFEKFKSDLITAASTQFGSGWGWLSVK--NGKLEISKTQNAENPLIN 151 (205) Q Consensus 74 ~~nH~lff~~l~p~~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~A~s~~GsGWvwL~~~--~~~L~i~~~~n~~~p~~~ 151 (205) ++||+|||++|+|+ +++.|++.|+++|+++|||+|+|+++|+++|++ |||||||+++ ++++.|.+++++++|... T Consensus 78 ~~nH~~fw~~l~p~-g~~~P~~~L~~~I~~~FGS~d~fk~~f~~~a~~--~sGW~wL~~~~~~~~~~i~~~~~~~~~~~~ 154 (212) T 1coj_A 78 VVLHELYFGMLTPG-GKGEPSEALKKKIEEDIGGLDACTNELKAAAMA--FRGWAILGLDIFSGRLVVNGLDAHNVYNLT 154 (212) T ss_dssp HHHHHHHHTTBCTT-CBSCCCHHHHHHHHHHTSCHHHHHHHHHHHHHH--CSSEEEEEEETTTTEEEEEEESBTTBSCCT T ss_pred CCEEHEEEEEECCC-CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCC--CCCCEEEEEECCCCEEEECCCCCCCCCCCC T ss_conf 01001035521699-998875999999998828999999999986035--677659999558872332146789986667 Q ss_pred CCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC Q ss_conf 4785356437687769875177499999998613598999999999997347 Q gi|254780495|r 152 GAIPILGIDVWEHAYYLDFKYRRAHYIESFITNLVNWEYVCERYETAMLAQK 203 (205) Q Consensus 152 ~~~PlL~iDvWEHAYylDY~n~r~~Yi~~f~~n~inW~~v~~r~~~a~~~~~ 203 (205) +.+|||||||||||||+||||+|++||++| |++|||++|++||++|+++.+ T Consensus 155 ~~~PlL~iDvWEHAYyldY~n~R~~Yi~~~-~~~INW~~V~~r~~~A~~~~~ 205 (212) T 1coj_A 155 GLIPLIVIDTYEHAYYVDYKNKRPPYIDAF-FKNINWDVVNERFEKAMKAYE 205 (212) T ss_dssp TCEEEEEEECSGGGTHHHHTTCHHHHHHHH-HHTBBHHHHHHHHHHHHHHHH T ss_pred CCCEEEEEEHHHHHHHHHHCCCHHHHHHHH-HHHCCHHHHHHHHHHHHHHHH T ss_conf 883489874446672887455789999999-974199999999999999999 No 30 >1fr2_B Colicin E9; protein-protein complex, zinc containing enzyme, HNH-motif, immune system; 1.60A {Escherichia coli} SCOP: d.4.1.1 PDB: 1bxi_B 1emv_B 1fsj_B 2gyk_B 2gze_B 2gzf_B 2gzg_B 2gzi_B 2gzj_B 2k5x_B 2vlo_B 2wpt_B 2vlp_B 2vln_B 2vlq_B 1v13_A 1v14_A 1v15_A 1znv_B 1zns_A ... Probab=68.26 E-value=2.2 Score=21.15 Aligned_cols=27 Identities=26% Similarity=0.676 Sum_probs=20.4 Q ss_pred CCCHHHHHHHHH-HHHHCCHHHHHHHHH Q ss_conf 764068999999-743089999999999 Q gi|254780495|r 90 KGKVPQALSDAI-DDNFGSFEKFKSDLI 116 (205) Q Consensus 90 ~~~p~~~L~~~I-~~~FGS~d~fk~~f~ 116 (205) +.+.|..+++.+ -+.|.|||.|++.|= T Consensus 31 gapiP~qIadkLrGr~F~sFd~FR~afW 58 (134) T 1fr2_B 31 GAPIPDRIADKLRDKEFKSFDDFRKAVW 58 (134) T ss_dssp CEECBHHHHHHHTTCEESSHHHHHHHHH T ss_pred CCCCCHHHHHHHCCCCCCCHHHHHHHHH T ss_conf 9968789999866885788899999999 No 31 >2jb0_B Colicin E7; hydrolase/inhibitor, hydrolase/inhibitor complex, zinc, toxin, plasmid, nuclease, hydrolase, antibiotic, H-N-H motif, bacteriocin; 1.91A {Escherichia coli} SCOP: d.4.1.1 PDB: 3fbd_A 2jaz_B 2jbg_B 3gkl_A 3gjn_B 1pt3_A 2ivh_A 1ujz_B 2erh_B Probab=61.79 E-value=4 Score=19.63 Aligned_cols=26 Identities=27% Similarity=0.699 Sum_probs=19.9 Q ss_pred CCHHHHHHHHH-HHHHCCHHHHHHHHH Q ss_conf 64068999999-743089999999999 Q gi|254780495|r 91 GKVPQALSDAI-DDNFGSFEKFKSDLI 116 (205) Q Consensus 91 ~~p~~~L~~~I-~~~FGS~d~fk~~f~ 116 (205) .+.|..+++.+ -+.|.|||.|++.|= T Consensus 29 apiP~~IadkLrGr~F~sFd~FR~afW 55 (131) T 2jb0_B 29 SPVPDRIANKLRDKEFKSFDDFRKKFW 55 (131) T ss_dssp EECBHHHHHHHTTCEESSHHHHHHHHH T ss_pred CCCCHHHHHHHCCCCCCCHHHHHHHHH T ss_conf 978789999866885788899999999 No 32 >7cei_B Protein (colicin E7 immunity protein); DNAse, E-group colicins, protein-protein interaction, protein recognition, immune system; 2.30A {Escherichia coli str} SCOP: d.4.1.1 Probab=56.30 E-value=5.8 Score=18.70 Aligned_cols=27 Identities=26% Similarity=0.672 Sum_probs=20.3 Q ss_pred CCHHHHHHHHH-HHHHCCHHHHHHHHHH Q ss_conf 64068999999-7430899999999999 Q gi|254780495|r 91 GKVPQALSDAI-DDNFGSFEKFKSDLIT 117 (205) Q Consensus 91 ~~p~~~L~~~I-~~~FGS~d~fk~~f~~ 117 (205) .+.|..+++.+ -+.|.|||.|++.|=. T Consensus 104 APIPsqIADKLRGR~F~sFD~FR~aFWk 131 (206) T 7cei_B 104 SPVPDRIANKLRDKEFKSFDDFRKKFWE 131 (206) T ss_dssp BCCBHHHHHHHTTCBCSSHHHHHHHHHH T ss_pred CCCCHHHHHHHCCCCCCCHHHHHHHHHH T ss_conf 9887899998668857888999999999 No 33 >2fyq_A Chymotrypsin-like cysteine proteinase; protease, norovirus, calicivirus, viral protein; 1.50A {Norwalk virus} PDB: 2fyr_A 2iph_A* 1wqs_A* Probab=46.16 E-value=7 Score=18.20 Aligned_cols=21 Identities=43% Similarity=0.884 Sum_probs=13.5 Q ss_pred CCCCCCEEEEECCCCEEEEEECC Q ss_conf 01434310010341012344314 Q gi|254780495|r 121 TQFGSGWGWLSVKNGKLEISKTQ 143 (205) Q Consensus 121 s~~GsGWvwL~~~~~~L~i~~~~ 143 (205) -.|||||.+.+ +..|.|.+|. T Consensus 23 v~fgsgwgfwV--S~~~fIT~tH 43 (194) T 2fyq_A 23 TKFGSGWGFWV--SPTVFITTTH 43 (194) T ss_dssp EEETTEEEEES--SSSEEEEEGG T ss_pred EECCCCEEEEE--CCCEEEEEEE T ss_conf 64367437887--0538898765 No 34 >3oru_A DUF1989 family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, metal binding protein; HET: MSE; 1.11A {Ruegeria SP} Probab=34.55 E-value=20 Score=15.55 Aligned_cols=20 Identities=10% Similarity=0.084 Sum_probs=8.8 Q ss_pred CCCEEEEECCCCEEEEEECC Q ss_conf 34310010341012344314 Q gi|254780495|r 124 GSGWGWLSVKNGKLEISKTQ 143 (205) Q Consensus 124 GsGWvwL~~~~~~L~i~~~~ 143 (205) |+||+|.+..++.|+|+... T Consensus 42 ~~g~a~~v~~Gq~lrI~d~~ 61 (234) T 3oru_A 42 RQGRAIRMAQGEALMVINRD 61 (234) T ss_dssp TCEEEEEECTTCEEEEECSS T ss_pred CCCEEEEECCCCEEEEEECC T ss_conf 97169998999989999389 Done!