HHsearch alignment for GI: 254780496 and conserved domain: COG0776
>COG0776 HimA Bacterial nucleoid DNA-binding protein [DNA replication, recombination, and repair].
Probab=99.94 E-value=6.4e-27 Score=186.53 Aligned_cols=93 Identities=34% Similarity=0.644 Sum_probs=91.1
Q ss_pred CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCEEEE
Q ss_conf 66699999999997199999999999999999999975599600004169998502676430688988899568853776
Q gi|254780496|r 4 TITRSDLVKSISKEFGLSRKDSTRFVTTLFNEICDSAVRGEAIKISSFATFHVKQKGSRVGRNLQTNQEVKIDPRRVVVF 83 (114)
Q Consensus 4 ~mtK~eli~~ia~~~g~s~~~~~~~v~~~~~~i~~~L~~g~~V~l~gfGtF~~~~~~~R~~rNP~Tge~i~ip~k~~v~F 83 (114)
T Consensus 1 ~mtKseli~~ia~~~~l~k~~a~~~v~~~~~~i~~aL~~G~~V~l~gFG~F~v~~R~aR~GRNPkTGe~i~I~a~~vp~F 80 (94)
T COG0776 1 TMTKSELIDAIAEKAGLSKKDAEEAVDAFLEEITEALAKGERVELRGFGTFEVRERAARTGRNPKTGEEIKIPAKKVPKF 80 (94)
T ss_pred CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCC
T ss_conf 98789999999997098799999999999999999997699489830046676202787787999998686357523355
Q ss_pred CCCHHHHHHHHHH
Q ss_conf 1698999997311
Q gi|254780496|r 84 KASSILKKRIMDD 96 (114)
Q Consensus 84 kpsk~Lk~~in~~ 96 (114)
T Consensus 81 k~gK~LK~~vn~~ 93 (94)
T COG0776 81 KPGKALKDAVNGA 93 (94)
T ss_pred CCCHHHHHHHHCC
T ss_conf 8768999988334