HHsearch alignment for GI: 254780496 and conserved domain: PRK10664
>PRK10664 transcriptional regulator HU subunit beta; Provisional.
Probab=99.95 E-value=2.1e-27 Score=189.54 Aligned_cols=90 Identities=28% Similarity=0.517 Sum_probs=89.4
Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCEEEEC
Q ss_conf 66999999999971999999999999999999999755996000041699985026764306889888995688537761
Q gi|254780496|r 5 ITRSDLVKSISKEFGLSRKDSTRFVTTLFNEICDSAVRGEAIKISSFATFHVKQKGSRVGRNLQTNQEVKIDPRRVVVFK 84 (114)
Q Consensus 5 mtK~eli~~ia~~~g~s~~~~~~~v~~~~~~i~~~L~~g~~V~l~gfGtF~~~~~~~R~~rNP~Tge~i~ip~k~~v~Fk 84 (114)
T Consensus 1 M~K~eLi~~ia~~~~ltk~~a~~~v~~~~~~i~~~l~~g~~V~l~gFGtF~v~~r~aR~grNP~Tge~i~Ipa~~v~~Fk 80 (90)
T PRK10664 1 MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTGRNPQTGKEITIAAAKVPSFR 80 (90)
T ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEECCCCCCCCCCCCEEEECCCCCEEEC
T ss_conf 97899999999870999999999999999999999977993998005899998766725609199988986586547774
Q ss_pred CCHHHHHHHH
Q ss_conf 6989999973
Q gi|254780496|r 85 ASSILKKRIM 94 (114)
Q Consensus 85 psk~Lk~~in 94 (114)
T Consensus 81 ~sk~LK~~vN 90 (90)
T PRK10664 81 AGKALKDAVN 90 (90)
T ss_pred CCHHHHHHHC
T ss_conf 7989998539