HHsearch alignment of GI: 254780496 and MMDB domain: 2o97_B_
>2o97_B (B:) NS1, HU-1, DNA-binding protein HU-beta; heterodimer, DNA structure, DNA supercoiling, E. coli; 2.45A {Escherichia coli}
Probab=99.92 E-value=8.4e-25 Score=173.14 Aligned_cols=90 Identities=28% Similarity=0.517 Sum_probs=89.3
Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCEEEEC
Q ss_conf 66999999999971999999999999999999999755996000041699985026764306889888995688537761
Q gi|254780496|r 5 ITRSDLVKSISKEFGLSRKDSTRFVTTLFNEICDSAVRGEAIKISSFATFHVKQKGSRVGRNLQTNQEVKIDPRRVVVFK 84 (114)
Q Consensus 5 mtK~eli~~ia~~~g~s~~~~~~~v~~~~~~i~~~L~~g~~V~l~gfGtF~~~~~~~R~~rNP~Tge~i~ip~k~~v~Fk 84 (114)
|||+|||+.|++++++++++++.++++|++.|.++|.+|++|+|+|||+|+++.+++|.++||+|||.+.||+|++|+|+
T Consensus 1 Mtk~eli~~ia~~~~~t~~~v~~~v~~~~~~i~~~L~~~~~V~l~~fG~F~v~~~~~r~~~np~tge~~~i~~k~~v~Fk 80 (90)
T 2o97_B 1 MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTGRNPQTGKEITIAAAKVPSFR 80 (90)
T ss_dssp CBHHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHHHHTTCCEEETTTEEEEEECCC------------------CEEEEE
T ss_pred CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCEEECCCCCCEEEECCCCEEEEE
T ss_conf 97899999999720999999999999999999999980764445505899998405640288999978995386228996
Q ss_pred CCHHHHHHHH
Q ss_conf 6989999973
Q gi|254780496|r 85 ASSILKKRIM 94 (114)
Q Consensus 85 psk~Lk~~in 94 (114)
||+.|++.||
T Consensus 81 p~k~lk~~iN 90 (90)
T 2o97_B 81 AGKALKDAVN 90 (90)
T ss_dssp ECHHHHHHCC
T ss_pred CCHHHHHHHC
T ss_conf 3989997629