HHsearch alignment for GI: 254780497 and conserved domain: PRK08234
>PRK08234 consensus.
Probab=94.43 E-value=0.23 Score=28.42 Aligned_cols=93 Identities=18% Similarity=0.165 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--HHHHCCCH---HHHHHHHHHHHHHCCCCC
Q ss_conf 7777888898740010001210244444158999999719787673365--86519330---126999999999806889
Q gi|254780497|r 227 AVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--VDIHGNTS---AASIPLALAVAVKEGRVK 301 (324)
Q Consensus 227 ~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--~~~~Gn~~---sas~~~~L~~~~~~g~l~ 301 (324)
T Consensus 299 p~~A~~~~L~ragl~~~Did~~EinEAFA~~~l~~~~~l~i~~~kvN~~GGaiAlGHP~GaTGarl~~~l~~~L~~---~ 375 (400)
T PRK08234 299 PVFATRKALRRAGLTVDDIDLVELNEAFAAQALACIRELGLDRAKVNVNGGAIALGHPLGASGARILTTLIYEMRR---R 375 (400)
T ss_pred HHHHHHHHHHHCCCCHHHCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---C
T ss_conf 6999999998749984228756760777888999999848978877898548874888032189999999999998---0
Q ss_pred CCCEEEE-EEECCCCCEEEEEEE
Q ss_conf 9989999-997145014568786
Q gi|254780497|r 302 KGDCLLL-EAMGGGFTSGTVLLR 323 (324)
Q Consensus 302 ~Gd~vll-~~~G~G~s~~a~llr 323 (324)
T Consensus 376 ~~~~Gl~s~C~ggG~g~-a~liE 397 (400)
T PRK08234 376 GSRYGLATMCIGVGQGI-ATIVE 397 (400)
T ss_pred CCCEEEEEECCCCCCEE-EEEEE
T ss_conf 99889999643214032-89999