HHsearch alignment for GI: 254780497 and conserved domain: PRK08304
>PRK08304 stage V sporulation protein AD; Validated.
Probab=99.04 E-value=1.1e-08 Score=75.10 Aligned_cols=232 Identities=23% Similarity=0.319 Sum_probs=145.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 99999999999997402123544336650122334589853100112202686444421012200346788899896415
Q gi|254780497|r 52 TASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGV 131 (324)
Q Consensus 52 ~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~ 131 (324)
T Consensus 56 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLln-Q~i~--s~f~ar~l~IP---f~GlyGACST~~Esl~laa~~vdgg~ 129 (336)
T PRK08304 56 ESKLMSDAIQQALQKANLKESDIDYLLAGDLLN-QTIS--ANFVARELGIP---FLGLYGACSTMMESLALASMLIDGGF 129 (336)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHCEEEEECHHHH-HHHH--HHHHHHHCCCC---EEEHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999999999997499977873897222455-4677--66779865998---01025677889999999999982663
Q ss_pred CCCCEEEEECCCC---CCCC----C-CC-CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCC
Q ss_conf 5653167630224---3222----4-56-632323454431234402654465434454101232035555561775487
Q gi|254780497|r 132 VRRVMVIGSDTFS---RIVD----W-SD-RSTCVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGG 202 (324)
Q Consensus 132 ~~~~Lvv~~e~~S---~~~d----~-~d-~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (324)
T Consensus 130 A~~vla~tSSH~~tAErQFR~P~EyG~Qrp~tAqwTVTGaGa~il~~~~~~p~------I-t~~--TiGkVvD-----~G 195 (336)
T PRK08304 130 ADRVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAVLLSKEGSGPK------I-TYA--TIGKVID-----YG 195 (336)
T ss_pred HHHHHEECCCCCHHHHHHCCCCHHCCCCCCCCCCEEEECEEEEEEECCCCCCE------E-EEE--EEEEEEE-----CC
T ss_conf 64531002334203665515803206779986517887517999813899977------9-898--6788876-----48
Q ss_pred CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC---CCHHHHHHHHHHCCCCHHHHHH-----
Q ss_conf 65444332001032024445577777778888987400100012102444---4415899999971978767336-----
Q gi|254780497|r 203 PSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQ---ANWRIINSIVDKMKIPFDKVIV----- 274 (324)
Q Consensus 203 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq---~~~~~~~~~~~~lgl~~e~~~~----- 274 (324)
T Consensus 196 i~D~-----~nM-G----aAMAPAA~dTI~~hf~Dtg~~p~dYDlIvTGDLg~vG~~i~~~Ll~e~g~~i~~~~~DCG~~ 265 (336)
T PRK08304 196 IKDP-----LDM-G----AAMAPAAADTIKQHFEDTGRTPEDYDLIVTGDLGAVGREIAKELLKEEGYDISDNYNDCGVM 265 (336)
T ss_pred CCCC-----CCC-H----HHHHHHHHHHHHHHHHHHCCCHHHCCEEEECCHHHHHHHHHHHHHHHCCCCHHHCCCCCCEE
T ss_conf 8884-----303-5----55537899999999998099900234899664588789999999998097855522756768
Q ss_pred HHH----H--HCCC---HHHHHHHH-HHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf 586----5--1933---01269999-99999806889998999999714501
Q gi|254780497|r 275 TVD----I--HGNT---SAASIPLA-LAVAVKEGRVKKGDCLLLEAMGGGFT 316 (324)
Q Consensus 275 ~~~----~--~Gn~---~sas~~~~-L~~~~~~g~l~~Gd~vll~~~G~G~s 316 (324)
T Consensus 266 iyd~e~Qdv~aGGSGcgCSAvV~~g~il~~m~~g~~---krvL~vaTGALlS 314 (336)
T PRK08304 266 IYDSEQQDVFAGGSGCACSAVVTYGYLYKELQKGKL---KRVLVVATGALLS 314 (336)
T ss_pred EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC---CEEEEEECCHHCC
T ss_conf 763777765688765444789989998999864873---1799997403138