HHsearch alignment for GI: 254780497 and conserved domain: PRK08963

>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed.
Probab=99.48  E-value=2.5e-12  Score=98.44  Aligned_cols=100  Identities=19%  Similarity=0.240  Sum_probs=86.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             89889999999999999974021235443366501223345898531001122026-86444421012200346788899
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADS  125 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~  125 (324)
T Consensus        32 l~~~~~~~L~a~~ik~~l~r~~i~p~~Id~Vi~G~v~~~~~g~n~AR~aaL~aGlp~~vp~~TVnr~C~SGl~Ai~~Aa~  111 (436)
T PRK08963         32 FHGVPAVDLGKMVVGELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAE  111 (436)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHH
T ss_conf             58899899999999999998298989999899983675676772999999975999888626776322356899999999


Q ss_pred             HHHHCCCCCCEEEEECCCCCC
Q ss_conf             896415565316763022432
Q gi|254780497|r  126 YIRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       126 li~~g~~~~~Lvv~~e~~S~~  146 (324)
T Consensus       112 ~I~~G~~dvvlaGGvEsMS~~  132 (436)
T PRK08963        112 SIMAGTIDIGIAGGADSSSVL  132 (436)
T ss_pred             HHHCCCCCEEEEECCCCCCCC
T ss_conf             997499978999451224668