HHsearch alignment for GI: 254780497 and conserved domain: TIGR02845
>TIGR02845 spore_V_AD stage V sporulation protein AD; InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation ..
Probab=99.33 E-value=2.2e-11 Score=92.46 Aligned_cols=235 Identities=20% Similarity=0.297 Sum_probs=152.1
Q ss_pred CCCHHHHH-----HHHHHHHHHHHCCCCC--CCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 88999999-----9999999974021235--4433665012233458985310011220268644442101220034678
Q gi|254780497|r 49 DETTASLG-----EAAARDALHHAEMSVD--DIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVT 121 (324)
Q Consensus 49 ~e~~~~la-----~~Aa~~al~~a~~~~~--~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~ 121 (324)
T Consensus 42 ge~SwEkAEr~lm~~Av~~aL~Ka~l~~~PP~vD~~LAGD-LLNQ~~--~anFvAR~L~iPf---lGLygACsTs~E~L~ 115 (331)
T TIGR02845 42 GEDSWEKAERKLMEDAVNLALKKANLKKDPPDVDFFLAGD-LLNQII--TANFVARELGIPF---LGLYGACSTSMETLA 115 (331)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHH-HHHHHH--HHHHHHHHCCCCC---EECCCHHHHHHHHHH
T ss_conf 7201899999999999999875358712787211120103-666789--9989887458882---340213578999999
Q ss_pred HHHHHHHHCCCCCCEEEEECCCC---CCCCC-C----C-CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 88998964155653167630224---32224-5----6-63232345443123440265446543445410123203555
Q gi|254780497|r 122 TADSYIRSGVVRRVMVIGSDTFS---RIVDW-S----D-RSTCVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGS 192 (324)
Q Consensus 122 ~A~~li~~g~~~~~Lvv~~e~~S---~~~d~-~----d-~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (324)
T Consensus 116 ~gA~lv~GGfAd~vLaAtSSHy~taERQFRYPTEyG~Qkp~tAq~TVTGAGA~~l~~~~~~~~------i-t~--aT~Gk 186 (331)
T TIGR02845 116 LGAMLVDGGFADRVLAATSSHYATAERQFRYPTEYGVQKPPTAQWTVTGAGAVLLASTGGGPR------I-TS--ATIGK 186 (331)
T ss_pred HHHHHHHCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHEEEECCCCCCCE------E-EE--EEEEE
T ss_conf 999998320022111121111353221025651256115998861250346486544789436------4-14--53014
Q ss_pred CCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC---CCHHHHHHHHHHC-CCC
Q ss_conf 556177548765444332001032024445577777778888987400100012102444---4415899999971-978
Q gi|254780497|r 193 YIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQ---ANWRIINSIVDKM-KIP 268 (324)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq---~~~~~~~~~~~~l-gl~ 268 (324)
T Consensus 187 V~D-----~G~~dP~~mG----------~AMAPAAaDTI~~Hf~dtg~~~~DYDLIvTGDL~rvG~~I~~~LL~e~yg~~ 251 (331)
T TIGR02845 187 VVD-----LGLTDPLDMG----------AAMAPAAADTIEAHFKDTGRSVDDYDLIVTGDLARVGSEILRKLLKEEYGYD 251 (331)
T ss_pred EEE-----CCCCCCCCHH----------HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCC
T ss_conf 771-----2336864113----------5412689999999998707880401367873300214899999988860875
Q ss_pred HHHHHH-----HH----HHH-----CCCHHHHHHHH-HHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf 767336-----58----651-----93301269999-99999806889998999999714501
Q gi|254780497|r 269 FDKVIV-----TV----DIH-----GNTSAASIPLA-LAVAVKEGRVKKGDCLLLEAMGGGFT 316 (324)
Q Consensus 269 ~e~~~~-----~~----~~~-----Gn~~sas~~~~-L~~~~~~g~l~~Gd~vll~~~G~G~s 316 (324)
T Consensus 252 ~~~~Y~DCG~~IY~~dqqdV~AGGSG~ACSAvV~yGyll~~l~~G~l---~k~LvvaTGALLS 311 (331)
T TIGR02845 252 VTEKYDDCGVMIYRPDQQDVFAGGSGCACSAVVTYGYLLKELKRGKL---KKVLVVATGALLS 311 (331)
T ss_pred CCCEECCCCEEEECCCCCCCCCCCCCCCHHHEEHHHHHHHHHHCCCC---EEEEEEECCHHHH
T ss_conf 00010456467533887810577856650332113789999836971---2788885103322