HHsearch alignment for GI: 254780497 and conserved domain: cd00827

>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00  E-value=0  Score=434.39  Aligned_cols=312  Identities=33%  Similarity=0.445  Sum_probs=265.7

Q ss_pred             EEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf             26999999964984117889998809998781102475188982898899999999999999740212354433665012
Q gi|254780497|r    3 RSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATS   82 (324)
Q Consensus         3 ~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~   82 (324)
T Consensus         1 ~v~I~~~g~y~P~~~v~~~~~~~~~~~~--~~~~~~Gi~~r~~a~~~e~~~~ma~~Aa~~aL~~a~~~~~~Idlli~~s~   78 (324)
T cd00827           1 DVGIEAIGAYLPRYRVDNEELAEGLGVD--PGKYTTGIGQRHMAGDDEDVPTMAVEAARRALERAGIDPDDIGLLIVATE   78 (324)
T ss_pred             CCCEEEEEEECCCCEECHHHHHHHHCCH--HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECC
T ss_conf             9368799997899479599999884952--76502470389967999999999999999999984989889979999325


Q ss_pred             CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             23345898531001122026864444210122003467888998964155653167630224322245663232345443
Q gi|254780497|r   83 TPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGDGA  162 (324)
Q Consensus        83 ~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGDGA  162 (324)
T Consensus        79 ~~~~~~p~~a~~i~~~Lgl~~~~~~di~~~C~g~~~aL~~A~~~l~~g~~~~~LVv~~e~~s~~~~~~~~-~~~~~GDgA  157 (324)
T cd00827          79 SPIDKGKSAATYLAELLGLTNAEAFDLKQACYGGTAALQLAANLVESGPWRYALVVASDIASYLLDEGSA-LEPTLGDGA  157 (324)
T ss_pred             CCCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHCCCCCCCCC-CCCCCCCCC
T ss_conf             7786797499999998589997188601422047999999998875487651478740110124677987-664457722


Q ss_pred             CEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCC-----C--CCCHHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             123440265446543445410123203555556177548765444-----3--320010320244455777777788889
Q gi|254780497|r  163 GALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSR-----T--VGCIRMEGKAVFKYAVEKAVELIEKVF  235 (324)
Q Consensus       163 aA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~g~~~~~~~~~~~~~~i~~~L  235 (324)
T Consensus       158 aA~ll~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  233 (324)
T cd00827         158 AAMLVSRNPGIL----AAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKAL  233 (324)
T ss_pred             EEEEEECCCCCC----CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             899982278655----5540367750156654444456788877754321002222444178999999999999999999


Q ss_pred             HHHHCCCCCCCCCCCCCCCH-HHHHHHHHHCCCCHHHH----HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEE
Q ss_conf             87400100012102444441-58999999719787673----36586519330126999999999806889998999999
Q gi|254780497|r  236 DSTHLTIENIDWFVPHQANW-RIINSIVDKMKIPFDKV----IVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEA  310 (324)
Q Consensus       236 ~~~gl~~~did~~~~Hq~~~-~~~~~~~~~lgl~~e~~----~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~  310 (324)
T Consensus       234 ~~~~~~-~~~~~~~~hq~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sasi~~~L~~~l~~g~l~~Gd~vll~~  312 (324)
T cd00827         234 DRAGLS-EDIDYFVPHQPNGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFS  312 (324)
T ss_pred             HHCCCC-HHHHHEEECCCCHHHHHHHHHHHCCCCHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
T ss_conf             984997-5441243257637899999999839965651351646516841448989999999999729999849999999


Q ss_pred             ECCCCCEEEEEE
Q ss_conf             714501456878
Q gi|254780497|r  311 MGGGFTSGTVLL  322 (324)
Q Consensus       311 ~G~G~s~~a~ll  322 (324)
T Consensus       313 ~G~G~s~~~~vl  324 (324)
T cd00827         313 YGSGFTAEAFVL  324 (324)
T ss_pred             ECHHHHHHHECC
T ss_conf             906831551119