HHsearch alignment for GI: 254780497 and conserved domain: cd00827
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=0 Score=434.39 Aligned_cols=312 Identities=33% Similarity=0.445 Sum_probs=265.7
Q ss_pred EEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf 26999999964984117889998809998781102475188982898899999999999999740212354433665012
Q gi|254780497|r 3 RSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATS 82 (324)
Q Consensus 3 ~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~ 82 (324)
T Consensus 1 ~v~I~~~g~y~P~~~v~~~~~~~~~~~~--~~~~~~Gi~~r~~a~~~e~~~~ma~~Aa~~aL~~a~~~~~~Idlli~~s~ 78 (324)
T cd00827 1 DVGIEAIGAYLPRYRVDNEELAEGLGVD--PGKYTTGIGQRHMAGDDEDVPTMAVEAARRALERAGIDPDDIGLLIVATE 78 (324)
T ss_pred CCCEEEEEEECCCCEECHHHHHHHHCCH--HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECC
T ss_conf 9368799997899479599999884952--76502470389967999999999999999999984989889979999325
Q ss_pred CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 23345898531001122026864444210122003467888998964155653167630224322245663232345443
Q gi|254780497|r 83 TPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGDGA 162 (324)
Q Consensus 83 ~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGDGA 162 (324)
T Consensus 79 ~~~~~~p~~a~~i~~~Lgl~~~~~~di~~~C~g~~~aL~~A~~~l~~g~~~~~LVv~~e~~s~~~~~~~~-~~~~~GDgA 157 (324)
T cd00827 79 SPIDKGKSAATYLAELLGLTNAEAFDLKQACYGGTAALQLAANLVESGPWRYALVVASDIASYLLDEGSA-LEPTLGDGA 157 (324)
T ss_pred CCCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHCCCCCCCCC-CCCCCCCCC
T ss_conf 7786797499999998589997188601422047999999998875487651478740110124677987-664457722
Q ss_pred CEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCC-----C--CCCHHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 123440265446543445410123203555556177548765444-----3--320010320244455777777788889
Q gi|254780497|r 163 GALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSR-----T--VGCIRMEGKAVFKYAVEKAVELIEKVF 235 (324)
Q Consensus 163 aA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~g~~~~~~~~~~~~~~i~~~L 235 (324)
T Consensus 158 aA~ll~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 233 (324)
T cd00827 158 AAMLVSRNPGIL----AAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKAL 233 (324)
T ss_pred EEEEEECCCCCC----CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 899982278655----5540367750156654444456788877754321002222444178999999999999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCH-HHHHHHHHHCCCCHHHH----HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEE
Q ss_conf 87400100012102444441-58999999719787673----36586519330126999999999806889998999999
Q gi|254780497|r 236 DSTHLTIENIDWFVPHQANW-RIINSIVDKMKIPFDKV----IVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEA 310 (324)
Q Consensus 236 ~~~gl~~~did~~~~Hq~~~-~~~~~~~~~lgl~~e~~----~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~ 310 (324)
T Consensus 234 ~~~~~~-~~~~~~~~hq~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sasi~~~L~~~l~~g~l~~Gd~vll~~ 312 (324)
T cd00827 234 DRAGLS-EDIDYFVPHQPNGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFS 312 (324)
T ss_pred HHCCCC-HHHHHEEECCCCHHHHHHHHHHHCCCCHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
T ss_conf 984997-5441243257637899999999839965651351646516841448989999999999729999849999999
Q ss_pred ECCCCCEEEEEE
Q ss_conf 714501456878
Q gi|254780497|r 311 MGGGFTSGTVLL 322 (324)
Q Consensus 311 ~G~G~s~~a~ll 322 (324)
T Consensus 313 ~G~G~s~~~~vl 324 (324)
T cd00827 313 YGSGFTAEAFVL 324 (324)
T ss_pred ECHHHHHHHECC
T ss_conf 906831551119