HHsearch alignment for GI: 254780497 and conserved domain: cd00828
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.56 E-value=9.4e-13 Score=101.14 Aligned_cols=293 Identities=20% Similarity=0.232 Sum_probs=163.7
Q ss_pred EEEEEEEEEECCCCE--ECHHHH-HHHHCCCHHH--HHH-CCCCCEEEEEC-------CC---------CCHHHHHHHHH
Q ss_conf 269999999649841--178899-9880999878--110-24751889828-------98---------89999999999
Q gi|254780497|r 3 RSTVRGIGLSLPRRV--LSNSDL-ESIVDTSDGW--IKR-RVGISRRHIAG-------KD---------ETTASLGEAAA 60 (324)
Q Consensus 3 ~~~I~~~g~ylP~~~--v~~~el-~~~~~~~~~~--i~~-~~GI~~R~~~~-------~~---------e~~~~la~~Aa 60 (324)
T Consensus 2 RVvItGiG~~~P~G~g~~~~~~fW~~L~~G~s~i~~~~~~~~~~-~~~~~g~v~~~~~~~~~~~~~~~~d~~~~~~l~aa 80 (407)
T cd00828 2 RVVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLKSRF-DRGVAGQIPTGDIPGWDAKRTGIVDRTTLLALVAT 80 (407)
T ss_pred CEEEEECEEECCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCC-CCEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHH
T ss_conf 29998171889798898999999999976997645898554678-72386647887735589889874599999999999
Q ss_pred HHHHHHHCCCCC------CCCEEEEECCCCC-----------------CCC------C-CCCCCHHHHHHCCCCCCCCCC
Q ss_conf 999974021235------4433665012233-----------------458------9-853100112202686444421
Q gi|254780497|r 61 RDALHHAEMSVD------DIDLIIVATSTPD-----------------QTF------P-STAVNIQNRLGMKRGFAFDMQ 110 (324)
Q Consensus 61 ~~al~~a~~~~~------~Id~ii~~s~~~~-----------------~~~------p-~~a~~i~~~LGl~~~~~~di~ 110 (324)
T Consensus 81 ~~Al~dAGl~~~~~~~~~r~g-v~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~~Gp~~tv~ 159 (407)
T cd00828 81 EEALADAGITDPYEVHPSEVG-VVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLSSHGPIKTPV 159 (407)
T ss_pred HHHHHHCCCCCHHHCCCCCEE-EEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCEE
T ss_conf 999996799964552787669-9999677438889988776554058732502301422488999998587889852650
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC---------------------CCCCC-CCCCCCCCCCCCEEEEE
Q ss_conf 012200346788899896415565316763022432---------------------22456-63232345443123440
Q gi|254780497|r 111 AVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRI---------------------VDWSD-RSTCVLFGDGAGALILE 168 (324)
Q Consensus 111 ~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~---------------------~d~~d-~~~~~lfGDGAaA~ll~ 168 (324)
T Consensus 160 tACaSsl~Ai~~A~~~I~~G~~d~aivGg~~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~rdG~v~gEGa~~lvLe 239 (407)
T cd00828 160 GACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDETRDGFVEAEGAGVLVLE 239 (407)
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEECCCCEEEEEE
T ss_conf 35079999999996662368514466431223563667999874454227899887513036678986834852177650
Q ss_pred CCCCCCCCCC--CCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 2654465434--45410123203555556177548765444332001032024445577777778888987400100012
Q gi|254780497|r 169 GVEVKGSSMA--DTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENID 246 (324)
Q Consensus 169 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did 246 (324)
T Consensus 240 ~~~~A~~rg~~i~a~i~g~~~~~dg~~~----------------~~~~~--------~~~~~~~~~~Al~~A~i~~~~i~ 295 (407)
T cd00828 240 RAELALARGAPIYGRVAGTASTTDGAGR----------------SVPAG--------GKGIARAIRTALAKAGLSLDDLD 295 (407)
T ss_pred EHHHHHHCCCEEEEEECCEEEECCCCCC----------------CCCCC--------CHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 4866766889799964364786689888----------------77986--------26789999999997199954563
Q ss_pred CCCCCCCCHHH-----HHHHHHHCCCCHHHH--HHHHHHHCCCHHHHHHHHHHHHH---HCCCCCC--------------
Q ss_conf 10244444158-----999999719787673--36586519330126999999999---8068899--------------
Q gi|254780497|r 247 WFVPHQANWRI-----INSIVDKMKIPFDKV--IVTVDIHGNTSAASIPLALAVAV---KEGRVKK-------------- 302 (324)
Q Consensus 247 ~~~~Hq~~~~~-----~~~~~~~lgl~~e~~--~~~~~~~Gn~~sas~~~~L~~~~---~~g~l~~-------------- 302 (324)
T Consensus 296 yI~aHgtgT~~gD~~E~~Al~~~f~~~~~~~~i~S~K~~~GH~~~aaG~~~li~~~l~l~~~~ippt~n~~~~~p~~~~~ 375 (407)
T cd00828 296 VISAHGTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVEHL 375 (407)
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 89951676866699999999998621378870445012303167899999999999998439719999989999765613
Q ss_pred ------------CCEEEEEEECCCCCEEEEE
Q ss_conf ------------9899999971450145687
Q gi|254780497|r 303 ------------GDCLLLEAMGGGFTSGTVL 321 (324)
Q Consensus 303 ------------Gd~vll~~~G~G~s~~a~l 321 (324)
T Consensus 376 ~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lv 406 (407)
T cd00828 376 SVVGLSRDLNLKVRAALVNAFGFGGSNAALV 406 (407)
T ss_pred CCCCCCCCCCCCCCEEEEECCCCCCEEEEEE
T ss_conf 3777687688999799997835680507896