HHsearch alignment for GI: 254780497 and conserved domain: cd00830
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=0 Score=523.23 Aligned_cols=314 Identities=52% Similarity=0.821 Sum_probs=297.2
Q ss_pred EEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf 26999999964984117889998809998781102475188982898899999999999999740212354433665012
Q gi|254780497|r 3 RSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATS 82 (324)
Q Consensus 3 ~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~ 82 (324)
T Consensus 1 ~~~I~~~g~y~P~~~v~n~~~~~~~g~~~~~i~~~~Gi~~R~~a~~~e~~~~ma~~Aa~~aL~~ag~~~~dIdlli~~s~ 80 (320)
T cd00830 1 NARILGIGSYLPERVVTNDELEKRLDTSDEWIRTRTGIRERRIADPGETTSDLAVEAAKKALEDAGIDADDIDLIIVATS 80 (320)
T ss_pred CCEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
T ss_conf 97899999977993784999998869898999870297489988999999999999999999866989567888999415
Q ss_pred CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 23345898531001122026864444210122003467888998964155653167630224322245663232345443
Q gi|254780497|r 83 TPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGDGA 162 (324)
Q Consensus 83 ~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGDGA 162 (324)
T Consensus 81 ~~~~~~P~~a~~v~~~LGl~~~~~fdi~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~e~~s~~~~~~~~~~~~lfGDga 160 (320)
T cd00830 81 TPDYLFPATACLVQARLGAKNAAAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRILDWTDRSTAVLFGDGA 160 (320)
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHCCCCCCCCCCHHHCCCCCC
T ss_conf 68986883999999996889972251045511589999999999855987616998413422554546621111037863
Q ss_pred CEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCC------CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 1234402654465434454101232035555561775487654------4433200103202444557777777888898
Q gi|254780497|r 163 GALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPST------SRTVGCIRMEGKAVFKYAVEKAVELIEKVFD 236 (324)
Q Consensus 163 aA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~ 236 (324)
T Consensus 161 aA~ll~~~~~~------~~i~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~ 234 (320)
T cd00830 161 GAVVLEATEED------PGILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALE 234 (320)
T ss_pred EEEEEEECCCC------CCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHH
T ss_conf 48999624888------842468999706886526845897667764333567617973289999887656999999999
Q ss_pred HHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf 74001000121024444415899999971978767336586519330126999999999806889998999999714501
Q gi|254780497|r 237 STHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFT 316 (324)
Q Consensus 237 ~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s 316 (324)
T Consensus 235 ~~g~~~~did~~v~Hq~~~~~~~~~~~~lgi~~~k~~~~~~~~GN~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s 314 (320)
T cd00830 235 KAGLTPDDIDWFVPHQANLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLT 314 (320)
T ss_pred HCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHH
T ss_conf 85999101657997068789999999980969899675685107558768999999999749999859999999804532
Q ss_pred EEEEEE
Q ss_conf 456878
Q gi|254780497|r 317 SGTVLL 322 (324)
Q Consensus 317 ~~a~ll 322 (324)
T Consensus 315 ~g~~~l 320 (320)
T cd00830 315 WGAALL 320 (320)
T ss_pred HHHHHC
T ss_conf 532029