Query         gi|254780497|ref|YP_003064910.1| 3-oxoacyl-(acyl carrier protein) synthase III [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 324
No_of_seqs    136 out of 4322
Neff          8.6 
Searched_HMMs 39220
Date          Sun May 29 23:33:01 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780497.hhm -d /home/congqian_1/database/cdd/Cdd.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 TIGR00747 fabH 3-oxoacyl-(acyl 100.0       0       0  620.0  18.8  319    2-324     1-329 (329)
  2 PRK09352 3-oxoacyl-(acyl carri 100.0       0       0  567.2  27.9  317    1-324     1-319 (319)
  3 COG0332 FabH 3-oxoacyl-[acyl-c 100.0       0       0  566.6  24.5  318    1-324     1-322 (323)
  4 PRK07515 3-oxoacyl-(acyl carri 100.0       0       0  550.8  22.1  317    2-324     1-371 (372)
  5 PRK12879 3-oxoacyl-(acyl carri 100.0       0       0  542.7  26.9  318    1-324     2-325 (326)
  6 PRK07204 3-oxoacyl-(acyl carri 100.0       0       0  543.6  25.7  317    1-324     1-329 (329)
  7 CHL00203 fabH 3-oxoacyl-acyl-c 100.0       0       0  538.6  27.2  315    4-324     1-325 (327)
  8 PRK05963 3-oxoacyl-(acyl carri 100.0       0       0  535.1  25.8  317    1-323     2-326 (327)
  9 PRK12880 3-oxoacyl-(acyl carri 100.0       0       0  530.6  24.7  311    1-324     5-338 (353)
 10 cd00830 KAS_III Ketoacyl-acyl  100.0       0       0  523.2  26.6  314    3-322     1-320 (320)
 11 PRK09258 3-oxoacyl-(acyl carri 100.0       0       0  524.8  22.9  315    4-324     1-339 (339)
 12 PRK06840 hypothetical protein; 100.0       0       0  519.5  25.8  316    2-324     3-335 (337)
 13 PRK06816 3-oxoacyl-(acyl carri 100.0       0       0  516.8  23.5  320    2-323     1-376 (378)
 14 PRK04262 hypothetical protein; 100.0       0       0  453.4  25.2  305    2-324     1-308 (346)
 15 cd00827 init_cond_enzymes "ini 100.0       0       0  434.4  24.2  312    3-322     1-324 (324)
 16 cd00831 CHS_like Chalcone and  100.0       0       0  424.3  24.1  314    3-322     1-361 (361)
 17 COG3425 PksG 3-hydroxy-3-methy 100.0 2.8E-45       0  308.2  21.0  299    2-317     1-303 (377)
 18 COG3424 BcsA Predicted naringe 100.0 8.1E-43       0  293.0  21.0  314    4-324     2-352 (356)
 19 cd00327 cond_enzymes Condensin 100.0 8.5E-39 2.2E-43  267.4  13.5  239   47-322     2-254 (254)
 20 TIGR01835 HMG-CoA-S_prok hydro 100.0 8.3E-37 2.1E-41  254.6  11.8  296    4-316     1-338 (412)
 21 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 1.2E-32   3E-37  228.1  12.1  300    4-319     2-304 (347)
 22 pfam00195 Chal_sti_synt_N Chal  99.9 2.1E-27 5.5E-32  194.6  11.2  168    3-171    16-228 (228)
 23 TIGR01833 HMG-CoA-S_euk hydrox  99.9 8.2E-25 2.1E-29  178.1  15.3  302    2-319     3-373 (461)
 24 pfam01154 HMG_CoA_synt_N Hydro  99.9 4.5E-24 1.1E-28  173.4  12.7  165    3-171     1-170 (171)
 25 KOG1393 consensus               99.9 9.2E-23 2.3E-27  165.0  16.0  304    3-322    11-374 (462)
 26 pfam08541 ACP_syn_III_C 3-Oxoa  99.9 2.5E-24 6.4E-29  175.0   7.2   90  235-324     1-90  (90)
 27 pfam08392 FAE1_CUT1_RppA FAE1/  99.8 1.3E-19 3.3E-24  144.9  13.2  198    3-201     8-239 (290)
 28 cd00825 decarbox_cond_enzymes   99.7 3.3E-17 8.5E-22  129.6  12.4  245   52-320    11-330 (332)
 29 cd00751 thiolase Thiolase are   99.7 7.1E-17 1.8E-21  127.4  12.7   99   48-146    18-117 (386)
 30 cd00829 SCP-x_thiolase Thiolas  99.7 2.3E-16 5.8E-21  124.2  14.8  202   47-270    11-296 (375)
 31 PRK07314 3-oxoacyl-(acyl carri  99.7 1.3E-15 3.4E-20  119.3  17.0  298    2-324     2-410 (411)
 32 PRK07103 polyketide beta-ketoa  99.7   7E-15 1.8E-19  114.7  18.1  295    1-323     6-413 (415)
 33 PRK06365 acetyl-CoA acetyltran  99.7   2E-14   5E-19  111.9  20.2  288    1-323     1-413 (415)
 34 PRK07516 acetyl-CoA acetyltran  99.7 7.6E-15 1.9E-19  114.5  17.9  270    1-323     1-386 (389)
 35 PRK05952 3-oxoacyl-(acyl carri  99.7 1.2E-14 3.1E-19  113.2  18.5  288    1-323     1-378 (379)
 36 cd00834 KAS_I_II Beta-ketoacyl  99.7 3.3E-15 8.5E-20  116.8  15.4  273    2-300     1-360 (406)
 37 PRK12578 acetyl-CoA acetyltran  99.7 7.9E-15   2E-19  114.4  17.3  255   48-323    17-384 (385)
 38 PRK06059 lipid-transfer protei  99.7   8E-15   2E-19  114.4  17.0  263   49-322    20-397 (399)
 39 PRK06333 3-oxoacyl-(acyl carri  99.7 2.3E-14 5.8E-19  111.4  18.9  297    2-324     4-422 (424)
 40 PRK08235 acetyl-CoA acetyltran  99.7 1.3E-15 3.3E-20  119.4  12.3   99   48-146    22-121 (393)
 41 PRK07800 consensus              99.7   4E-15   1E-19  116.3  14.2  100   47-146    21-121 (393)
 42 PRK05790 acetyl-CoA acetyltran  99.7 2.9E-15 7.5E-20  117.1  13.2   99   48-146    22-121 (393)
 43 PRK06845 consensus              99.7 2.8E-15 7.1E-20  117.3  12.5   99   48-146    22-122 (392)
 44 PRK08256 lipid-transfer protei  99.7 6.3E-15 1.6E-19  115.0  14.1  255   48-323    18-389 (391)
 45 pfam08545 ACP_syn_III 3-Oxoacy  99.7 1.6E-16 4.2E-21  125.2   5.9   80  107-191     1-80  (80)
 46 PTZ00050 3-oxoacyl-acyl carrie  99.6 1.6E-14 4.1E-19  112.4  15.9  296    3-323    62-473 (477)
 47 PRK06501 3-oxoacyl-(acyl carri  99.6   4E-14   1E-18  109.9  17.8  299    3-324    12-423 (425)
 48 PRK07910 3-oxoacyl-(acyl carri  99.6 4.5E-14 1.2E-18  109.6  17.9  298    1-324    11-418 (418)
 49 pfam02797 Chal_sti_synt_C Chal  99.6 5.1E-16 1.3E-20  122.0   7.9  107  217-323    32-148 (151)
 50 PRK06064 acetyl-CoA acetyltran  99.6 1.3E-14 3.4E-19  112.9  15.0  202   48-269    18-302 (389)
 51 PRK06157 acetyl-CoA acetyltran  99.6 5.9E-14 1.5E-18  108.8  17.8  247   48-313    23-383 (400)
 52 PRK08722 3-oxoacyl-(acyl carri  99.6 4.7E-14 1.2E-18  109.4  17.2  297    2-323     4-412 (414)
 53 PRK07967 3-oxoacyl-(acyl carri  99.6 6.3E-14 1.6E-18  108.6  17.8  292    1-324     1-404 (406)
 54 PRK06364 consensus              99.6 7.7E-14   2E-18  108.1  18.2  254   48-322    21-387 (389)
 55 PRK08768 consensus              99.6 3.9E-14   1E-18  110.0  16.6  298    1-323     1-409 (411)
 56 TIGR03150 fabF 3-oxoacyl-[acyl  99.6 6.8E-14 1.7E-18  108.4  17.4  297    2-323     1-407 (407)
 57 PRK06289 acetyl-CoA acetyltran  99.6 7.1E-14 1.8E-18  108.3  17.2  102   43-144    17-121 (408)
 58 PRK08371 consensus              99.6 1.1E-13 2.8E-18  107.1  17.8  274    1-323     1-386 (388)
 59 PRK07801 acetyl-CoA acetyltran  99.6 2.5E-14 6.3E-19  111.2  14.0  100   47-146    21-122 (382)
 60 PRK06158 thiolase; Provisional  99.6 2.5E-13 6.4E-18  104.8  17.9  248   47-322    23-378 (384)
 61 PRK06954 acetyl-CoA acetyltran  99.6   3E-14 7.6E-19  110.7  12.8   99   48-146    27-126 (397)
 62 PRK09185 3-oxoacyl-(acyl carri  99.6 1.8E-13 4.6E-18  105.7  16.2  291    1-323     2-392 (395)
 63 PRK07851 acetyl-CoA acetyltran  99.6 8.7E-14 2.2E-18  107.7  13.3  100   47-146    22-123 (405)
 64 PRK07491 consensus              99.6 7.4E-14 1.9E-18  108.2  12.8  100   47-146    22-122 (392)
 65 PRK08041 consensus              99.6 8.5E-14 2.2E-18  107.8  13.1  100   47-146    21-121 (391)
 66 PRK06363 consensus              99.6 5.5E-13 1.4E-17  102.7  17.1  201   49-269    19-302 (387)
 67 cd00826 nondecarbox_cond_enzym  99.6 9.9E-14 2.5E-18  107.4  13.1   98   48-145    19-117 (393)
 68 PRK06366 acetyl-CoA acetyltran  99.6 6.4E-14 1.6E-18  108.6  11.9  100   47-146    21-121 (388)
 69 PRK07124 consensus              99.6 3.5E-14 8.8E-19  110.3  10.3   99   48-146    22-121 (402)
 70 cd00828 elong_cond_enzymes "el  99.6 9.4E-13 2.4E-17  101.1  17.4  293    3-321     2-406 (407)
 71 PRK08313 acetyl-CoA acetyltran  99.5 2.7E-12 6.9E-17   98.2  18.7  250   48-322    21-383 (391)
 72 PRK09051 beta-ketothiolase; Pr  99.5   2E-13   5E-18  105.5  12.8  100   47-146    22-123 (394)
 73 PRK08439 3-oxoacyl-(acyl carri  99.5 1.8E-12 4.6E-17   99.3  17.4  288    1-323     1-403 (405)
 74 PRK06065 acetyl-CoA acetyltran  99.5 1.9E-12 4.8E-17   99.2  16.9  254   48-323    26-392 (393)
 75 PRK08242 acetyl-CoA acetyltran  99.5 9.8E-13 2.5E-17  101.1  15.4  100   47-146    23-124 (402)
 76 PRK08142 acetyl-CoA acetyltran  99.5 1.6E-12 4.2E-17   99.6  16.4  251   47-323    20-386 (388)
 77 PRK09116 3-oxoacyl-(acyl carri  99.5 1.2E-12 2.9E-17  100.6  15.2  243   52-323     4-336 (336)
 78 PRK08131 acetyl-CoA acetyltran  99.5 3.3E-13 8.3E-18  104.1  12.3  100   47-146    21-122 (401)
 79 PRK06445 acetyl-CoA acetyltran  99.5   6E-13 1.5E-17  102.4  13.4   99   48-146    28-128 (394)
 80 smart00825 PKS_KS Beta-ketoacy  99.5 1.6E-13 4.1E-18  106.0  10.3  222   55-300    90-367 (424)
 81 PRK06504 acetyl-CoA acetyltran  99.5 1.6E-13 4.1E-18  106.1  10.1  273   47-323    21-388 (390)
 82 PRK07025 consensus              99.5 3.4E-13 8.6E-18  104.0  11.6   99   48-146    22-121 (393)
 83 PRK06205 acetyl-CoA acetyltran  99.5 9.5E-13 2.4E-17  101.1  13.8   99   48-146    22-121 (404)
 84 PRK07850 acetyl-CoA acetyltran  99.5 7.9E-13   2E-17  101.6  12.9  272   47-322    21-384 (387)
 85 cd00832 CLF Chain-length facto  99.5 1.4E-12 3.5E-17  100.1  14.0  267    2-299     1-352 (399)
 86 PRK05656 acetyl-CoA acetyltran  99.5   3E-12 7.5E-17   98.0  15.2  100   47-146    21-121 (392)
 87 PRK07108 acetyl-CoA acetyltran  99.5 1.5E-12 3.8E-17   99.9  13.5  100   47-146    22-123 (392)
 88 PRK08963 fadI 3-ketoacyl-CoA t  99.5 2.5E-12 6.4E-17   98.4  14.5  100   47-146    32-132 (436)
 89 PRK06147 3-oxoacyl-(acyl carri  99.5 4.3E-11 1.1E-15   90.5  20.5  248   52-324    64-340 (346)
 90 PRK06025 acetyl-CoA acetyltran  99.5   8E-12   2E-16   95.2  16.6   99   47-145    24-124 (417)
 91 cd00833 PKS polyketide synthas  99.5 7.5E-13 1.9E-17  101.8  11.4  223   54-300    89-367 (421)
 92 PRK06633 acetyl-CoA acetyltran  99.5 5.5E-12 1.4E-16   96.2  15.4   99   47-145    22-121 (392)
 93 PRK08947 fadA 3-ketoacyl-CoA t  99.5   2E-12 5.1E-17   99.1  12.6  100   47-146    22-124 (387)
 94 PRK08170 acetyl-CoA acetyltran  99.4 1.7E-12 4.4E-17   99.5  11.7   99   48-146    23-122 (426)
 95 PRK09050 beta-ketoadipyl CoA t  99.4 1.3E-12 3.4E-17  100.2  11.0  100   47-146    21-123 (401)
 96 PRK06689 consensus              99.4   1E-12 2.6E-17  100.9   9.9  100   47-146    21-121 (391)
 97 PRK07937 lipid-transfer protei  99.4 3.6E-11 9.1E-16   91.1  16.9  259    1-319     1-344 (352)
 98 PRK08234 consensus              99.4 1.8E-12 4.6E-17   99.4  10.1   99   48-146    22-123 (400)
 99 PRK09268 acetyl-CoA acetyltran  99.4 1.6E-11 4.2E-16   93.2  14.2  100   47-146    26-126 (428)
100 PRK07855 lipid-transfer protei  99.4 5.2E-11 1.3E-15   90.1  16.3  253   48-322    20-385 (386)
101 PRK09052 acetyl-CoA acetyltran  99.3 1.3E-11 3.3E-16   93.9  10.5  270   48-320    27-395 (399)
102 PRK07661 acetyl-CoA acetyltran  99.3 6.1E-11 1.5E-15   89.6  13.6   99   47-146    16-116 (384)
103 TIGR02845 spore_V_AD stage V s  99.3 2.2E-11 5.5E-16   92.5  11.2  235   49-316    42-311 (331)
104 PRK06066 acetyl-CoA acetyltran  99.3 2.6E-10 6.7E-15   85.5  16.6  248    1-305     1-354 (375)
105 PRK13359 beta-ketoadipyl CoA t  99.3   1E-10 2.6E-15   88.2  14.0  100   47-146    21-123 (400)
106 PRK06690 acetyl-CoA acetyltran  99.2 2.4E-10 6.2E-15   85.8  12.3  267   47-322    20-357 (361)
107 COG3321 Polyketide synthase mo  99.2 1.9E-09 4.8E-14   80.1  14.2  215   55-293    94-360 (1061)
108 COG0304 FabB 3-oxoacyl-(acyl-c  99.2 7.1E-10 1.8E-14   82.8  11.8  231    1-256     2-307 (412)
109 pfam00109 ketoacyl-synt Beta-k  99.1 9.2E-10 2.4E-14   82.1   9.0  167    3-171     3-241 (243)
110 pfam00108 Thiolase_N Thiolase,  99.1 3.9E-10 9.8E-15   84.5   6.5  100   47-146    21-121 (264)
111 PRK08304 stage V sporulation p  99.0 1.1E-08 2.9E-13   75.1  13.3  232   52-316    56-314 (336)
112 pfam07451 SpoVAD Stage V sporu  99.0 1.4E-08 3.6E-13   74.5  13.8  232   52-316    51-309 (329)
113 TIGR01930 AcCoA-C-Actrans acet  99.0 5.2E-10 1.3E-14   83.6   6.1  101   47-147    19-122 (447)
114 PRK06519 3-oxoacyl-(acyl carri  99.0 2.3E-08 5.7E-13   73.2  13.8  265    2-302     6-361 (397)
115 PRK12404 stage V sporulation p  99.0 3.2E-08 8.3E-13   72.2  13.1  232   52-316    54-312 (334)
116 KOG1394 consensus               98.9 9.4E-09 2.4E-13   75.6   9.6  232    1-256    23-332 (440)
117 KOG1390 consensus               98.8 3.1E-07 7.8E-12   66.0  13.4  269   48-323    26-394 (396)
118 KOG1389 consensus               98.8 1.3E-07 3.3E-12   68.3  11.5  272   47-321    56-421 (435)
119 PRK08257 acetyl-CoA acetyltran  98.8   1E-06 2.5E-11   62.7  15.0   96   48-144    25-121 (502)
120 KOG1202 consensus               98.7 4.5E-07 1.1E-11   64.9  11.7  295    2-322    11-413 (2376)
121 KOG1406 consensus               98.7   9E-09 2.3E-13   75.7   2.5   95   48-145    25-119 (408)
122 KOG1391 consensus               98.5 3.8E-06 9.6E-11   59.0  11.6   96   47-145    23-123 (396)
123 COG0183 PaaJ Acetyl-CoA acetyl  98.4 5.9E-07 1.5E-11   64.1   5.4   99   49-147    24-126 (392)
124 pfam08540 HMG_CoA_synt_C Hydro  98.3 1.3E-05 3.3E-10   55.6  10.8  110  213-322    29-199 (282)
125 KOG1392 consensus               98.3 1.6E-06 4.1E-11   61.4   5.4  107   39-145    49-160 (465)
126 TIGR02813 omega_3_PfaA polyket  96.6   0.003 7.6E-08   40.5   4.4  187   55-268   141-359 (2773)
127 pfam00195 Chal_sti_synt_N Chal  96.6   0.015 3.8E-07   36.1   7.7   88  221-311   100-191 (228)
128 pfam02803 Thiolase_C Thiolase,  96.3   0.021 5.4E-07   35.1   7.1   93  227-323    24-122 (123)
129 cd00831 CHS_like Chalcone and   96.2   0.028 7.2E-07   34.3   7.3   11   61-71     42-52  (361)
130 TIGR01930 AcCoA-C-Actrans acet  96.2  0.0031   8E-08   40.4   2.4   79  228-307   331-431 (447)
131 PRK05963 3-oxoacyl-(acyl carri  95.5   0.016 4.1E-07   35.8   3.7   17  229-245   259-275 (327)
132 TIGR02845 spore_V_AD stage V s  95.3    0.04   1E-06   33.3   5.2   66  225-300    52-125 (331)
133 PRK12879 3-oxoacyl-(acyl carri  95.3   0.046 1.2E-06   33.0   5.5   14  231-244   259-272 (326)
134 PRK13359 beta-ketoadipyl CoA t  95.3    0.15 3.7E-06   29.7   8.0   93  227-323   298-398 (400)
135 PRK09258 3-oxoacyl-(acyl carri  95.3   0.017 4.3E-07   35.7   3.2   16  257-272   245-260 (339)
136 pfam08392 FAE1_CUT1_RppA FAE1/  95.2    0.07 1.8E-06   31.8   6.2   34  135-168   107-151 (290)
137 PRK06816 3-oxoacyl-(acyl carri  94.9    0.11 2.7E-06   30.6   6.4   37  257-296   277-313 (378)
138 cd00830 KAS_III Ketoacyl-acyl   94.9    0.12 3.1E-06   30.2   6.6   16  230-245   255-270 (320)
139 PRK09352 3-oxoacyl-(acyl carri  94.8    0.11 2.8E-06   30.5   6.2   14  258-271   226-239 (319)
140 PRK07491 consensus              94.7    0.21 5.3E-06   28.8   7.3   91  228-322   293-389 (392)
141 PRK06205 acetyl-CoA acetyltran  94.6    0.18 4.5E-06   29.2   6.8   92  228-323   301-401 (404)
142 CHL00203 fabH 3-oxoacyl-acyl-c  94.5   0.074 1.9E-06   31.6   4.8   16  230-245   258-273 (327)
143 PRK06845 consensus              94.5    0.23 5.7E-06   28.5   7.2   92  228-323   293-390 (392)
144 PRK08234 consensus              94.4    0.23   6E-06   28.4   7.2   93  227-323   299-397 (400)
145 PRK08242 acetyl-CoA acetyltran  94.2    0.32 8.1E-06   27.6   7.4   91  228-322   303-399 (402)
146 cd00327 cond_enzymes Condensin  94.1   0.082 2.1E-06   31.3   4.3   27   54-80    145-171 (254)
147 COG3424 BcsA Predicted naringe  94.1    0.17 4.3E-06   29.4   5.9   18  153-170   227-244 (356)
148 PRK06504 acetyl-CoA acetyltran  94.1    0.23 5.8E-06   28.5   6.5   15  157-171   246-260 (390)
149 PRK07204 3-oxoacyl-(acyl carri  94.0   0.059 1.5E-06   32.2   3.3   11  260-270   238-248 (329)
150 PRK06840 hypothetical protein;  93.9   0.072 1.8E-06   31.7   3.7   16  257-272   242-257 (337)
151 PRK07851 acetyl-CoA acetyltran  93.9    0.32 8.3E-06   27.5   7.0   91  228-321   305-401 (405)
152 PRK07801 acetyl-CoA acetyltran  93.9    0.29 7.4E-06   27.8   6.8   91  228-322   283-379 (382)
153 PRK05952 3-oxoacyl-(acyl carri  93.8    0.32 8.1E-06   27.6   6.9   14   69-82    158-171 (379)
154 PRK08131 acetyl-CoA acetyltran  93.7    0.52 1.3E-05   26.2   7.7   92  228-323   299-398 (401)
155 PRK07855 lipid-transfer protei  93.6    0.22 5.5E-06   28.7   5.7   16    1-17      1-18  (386)
156 PRK08041 consensus              93.6    0.43 1.1E-05   26.8   7.2   92  228-323   293-390 (391)
157 PRK06633 acetyl-CoA acetyltran  93.5    0.37 9.5E-06   27.1   6.8   93  227-323   292-390 (392)
158 PRK07850 acetyl-CoA acetyltran  93.5    0.34 8.7E-06   27.4   6.5   16  157-172   243-258 (387)
159 PRK09052 acetyl-CoA acetyltran  93.4    0.36 9.2E-06   27.2   6.5   17  157-173   255-271 (399)
160 PRK09050 beta-ketoadipyl CoA t  93.3    0.37 9.3E-06   27.2   6.5   91  228-322   300-398 (401)
161 pfam02803 Thiolase_C Thiolase,  93.3    0.22 5.5E-06   28.6   5.3   99   49-169    14-123 (123)
162 PRK06445 acetyl-CoA acetyltran  93.3    0.52 1.3E-05   26.2   7.2   91  228-322   295-391 (394)
163 PRK05656 acetyl-CoA acetyltran  93.3     0.4   1E-05   27.0   6.6   93  227-323   293-391 (392)
164 PRK04262 hypothetical protein;  93.2    0.12   3E-06   30.4   3.7   26   56-81    211-236 (346)
165 PRK09185 3-oxoacyl-(acyl carri  93.1    0.47 1.2E-05   26.5   6.8   13   70-82    175-187 (395)
166 PRK08170 acetyl-CoA acetyltran  93.1    0.17 4.2E-06   29.4   4.4   92  228-323   310-424 (426)
167 pfam02801 Ketoacyl-synt_C Beta  93.0    0.26 6.7E-06   28.1   5.4   78  225-302    25-112 (117)
168 PRK07515 3-oxoacyl-(acyl carri  92.9    0.49 1.2E-05   26.4   6.5   16  258-273   277-292 (372)
169 PRK06690 acetyl-CoA acetyltran  92.7    0.37 9.3E-06   27.2   5.8   17  157-173   216-232 (361)
170 PRK08257 acetyl-CoA acetyltran  92.7    0.34 8.6E-06   27.4   5.6   89  225-316   294-391 (502)
171 PRK07937 lipid-transfer protei  92.7    0.21 5.4E-06   28.7   4.5   27   52-78    138-164 (352)
172 PRK06501 3-oxoacyl-(acyl carri  92.6    0.44 1.1E-05   26.7   6.0   10   72-81    192-201 (425)
173 pfam08541 ACP_syn_III_C 3-Oxoa  92.5   0.055 1.4E-06   32.4   1.3   69   64-140     1-77  (90)
174 PRK07661 acetyl-CoA acetyltran  92.4    0.47 1.2E-05   26.5   6.0   92  228-323   285-382 (384)
175 PRK06954 acetyl-CoA acetyltran  92.4    0.38 9.8E-06   27.1   5.5   92  228-323   298-395 (397)
176 TIGR02446 FadI acetyl-CoA C-ac  91.9    0.13 3.4E-06   30.0   2.6   94   48-142    27-122 (430)
177 cd00829 SCP-x_thiolase Thiolas  91.9    0.63 1.6E-05   25.7   6.1   19  226-244   279-297 (375)
178 COG0332 FabH 3-oxoacyl-[acyl-c  91.9    0.64 1.6E-05   25.6   6.1   12  260-271   231-242 (323)
179 PRK06689 consensus              91.8    0.38 9.6E-06   27.1   4.9   93  227-323   291-389 (391)
180 cd00826 nondecarbox_cond_enzym  91.7    0.71 1.8E-05   25.4   6.2   43  228-270   272-314 (393)
181 PRK07025 consensus              91.1     0.3 7.5E-06   27.8   3.8   92  228-323   294-391 (393)
182 PRK06158 thiolase; Provisional  90.5    0.24   6E-06   28.4   2.8   13    3-16      9-21  (384)
183 PRK12578 acetyl-CoA acetyltran  90.4     0.8   2E-05   25.0   5.4   13    3-15      2-14  (385)
184 PRK09051 beta-ketothiolase; Pr  90.3    0.52 1.3E-05   26.2   4.5   92  227-321   294-391 (394)
185 PRK08947 fadA 3-ketoacyl-CoA t  89.6    0.62 1.6E-05   25.7   4.4   90  228-321   285-384 (387)
186 PRK12880 3-oxoacyl-(acyl carri  89.6    0.75 1.9E-05   25.2   4.8   23  229-251   273-295 (353)
187 cd00751 thiolase Thiolase are   89.3    0.63 1.6E-05   25.7   4.2   96  228-323   288-385 (386)
188 cd00832 CLF Chain-length facto  89.1    0.71 1.8E-05   25.4   4.3   84  231-318   311-396 (399)
189 PRK08371 consensus              88.2    0.27 6.8E-06   28.1   1.7   19   59-77    148-166 (388)
190 PRK09268 acetyl-CoA acetyltran  87.5    0.26 6.6E-06   28.1   1.3   91  228-322   313-426 (428)
191 PRK08256 lipid-transfer protei  87.5    0.38 9.6E-06   27.1   2.1   34    2-35      1-45  (391)
192 PRK06065 acetyl-CoA acetyltran  87.2    0.51 1.3E-05   26.3   2.6   20    3-23     11-33  (393)
193 PRK13944 protein-L-isoaspartat  87.0     1.7 4.3E-05   23.0   5.2   31   88-119    57-88  (205)
194 pfam01135 PCMT Protein-L-isoas  85.9       2 5.2E-05   22.4   5.2   25   88-112    58-83  (205)
195 PRK13942 protein-L-isoaspartat  85.9     2.1 5.3E-05   22.4   5.2   32   88-120    61-93  (214)
196 TIGR02470 sucr_synth sucrose s  85.8    0.42 1.1E-05   26.8   1.6  124    5-135   316-462 (790)
197 TIGR02430 pcaF beta-ketoadipyl  84.8    0.75 1.9E-05   25.2   2.5   95   51-145    24-121 (400)
198 TIGR02482 PFKA_ATP 6-phosphofr  84.8     2.1 5.3E-05   22.4   4.8   13  299-311   276-288 (302)
199 pfam03377 Avirulence Xanthomon  84.2     3.3 8.3E-05   21.1   6.6   45  233-277   203-254 (289)
200 COG0013 AlaS Alanyl-tRNA synth  83.3     1.5 3.8E-05   23.3   3.5   13  301-313   651-663 (879)
201 PRK13410 molecular chaperone D  82.5     2.2 5.7E-05   22.2   4.2   46  223-268   307-355 (719)
202 PRK08197 threonine synthase; V  79.5     4.8 0.00012   20.0   5.2   64  256-319   310-384 (402)
203 PRK00290 dnaK molecular chaper  79.4     3.6 9.2E-05   20.8   4.4   50  222-271   306-358 (631)
204 cd01451 vWA_Magnesium_chelatas  79.1     4.9 0.00013   20.0   6.5   73   50-129    16-91  (178)
205 PRK00312 pcm protein-L-isoaspa  77.2     2.4 6.1E-05   22.0   2.9   33   87-120    62-95  (213)
206 pfam01295 Adenylate_cycl Adeny  76.8       3 7.7E-05   21.3   3.4   29   47-76    413-441 (830)
207 PRK13943 protein-L-isoaspartat  76.0     2.7   7E-05   21.6   2.9   22  122-143   115-136 (317)
208 PRK03673 competence damage-ind  76.0     6.1 0.00015   19.4   6.5   83    1-102     1-89  (396)
209 PRK07591 threonine synthase; V  75.5     4.7 0.00012   20.1   4.1   68  249-316   314-393 (422)
210 CHL00094 dnaK heat shock prote  75.3     4.3 0.00011   20.3   3.8   49  222-270   306-357 (622)
211 PRK13411 molecular chaperone D  74.7     6.5 0.00017   19.2   4.8   42  224-265   307-351 (655)
212 TIGR00151 ispF 2C-methyl-D-ery  74.7     2.9 7.4E-05   21.4   2.8   58  227-284    79-145 (159)
213 PTZ00186 heat shock 70 kDa pre  73.5     5.3 0.00014   19.8   3.9   30  225-254   334-363 (657)
214 PRK00055 ribonuclease Z; Revie  72.6     4.8 0.00012   20.1   3.5   68    1-88      1-68  (259)
215 TIGR02445 fadA acetyl-CoA C-ac  72.3     2.6 6.7E-05   21.7   2.1   94   49-143    22-119 (385)
216 PRK09585 anmK anhydro-N-acetyl  71.9     7.6 0.00019   18.8   4.5   60   53-112    70-139 (366)
217 TIGR02288 PaaN_2 phenylacetic   70.3     8.2 0.00021   18.6   4.5   81   51-142   239-324 (560)
218 PRK05183 hscA chaperone protei  69.5     4.9 0.00012   20.0   3.0   48  223-270   312-362 (621)
219 PRK09604 putative DNA-binding/  69.3     8.6 0.00022   18.4   4.4   33   57-91     56-88  (335)
220 PRK05638 threonine synthase; V  68.3     9.1 0.00023   18.3   7.0   68  249-316   280-358 (443)
221 PRK09450 cyaA adenylate cyclas  68.0     6.5 0.00017   19.2   3.4   30   47-77    408-437 (833)
222 TIGR01751 crot-CoA-red crotony  67.7     4.5 0.00011   20.3   2.5   29  288-317   378-407 (409)
223 PRK08942 D,D-heptose 1,7-bisph  67.0     8.8 0.00022   18.4   3.9   50  225-275    68-126 (181)
224 pfam03702 UPF0075 Uncharacteri  65.8      10 0.00026   18.0   4.1   58   54-112    68-138 (363)
225 PTZ00009 heat shock 70 kDa pro  65.5     8.7 0.00022   18.4   3.6   28  227-254   315-342 (657)
226 PRK11762 nudE ADP-ribose dipho  65.0     9.2 0.00023   18.3   3.6   21   58-78     92-112 (185)
227 pfam00814 Peptidase_M22 Glycop  64.4      11 0.00027   17.9   3.9   25   57-81     33-57  (225)
228 PRK09605 O-sialoglycoprotein e  63.9      11 0.00028   17.7   3.9   87   56-151    53-143 (536)
229 PRK06260 threonine synthase; V  63.3      11 0.00029   17.7   4.0   62  256-317   301-373 (400)
230 PRK07409 threonine synthase; V  63.1      11 0.00029   17.7   4.2   36  282-317   289-324 (350)
231 KOG2707 consensus               62.8     9.9 0.00025   18.0   3.5   29   58-87     88-116 (405)
232 COG3072 CyaA Adenylate cyclase  62.6       4  0.0001   20.6   1.4   18   19-36    354-371 (853)
233 PRK09275 aspartate aminotransf  62.1      12  0.0003   17.5   5.2   93   35-128    78-186 (531)
234 PRK06721 threonine synthase; R  60.7      13 0.00032   17.4   4.1   35  282-316   285-319 (352)
235 PRK05446 imidazole glycerol-ph  60.3      13 0.00032   17.4   3.6   27   57-86     72-98  (354)
236 pfam06406 StbA StbA protein. T  60.3     7.8  0.0002   18.7   2.6   29   50-78     72-100 (318)
237 pfam00862 Sucrose_synth Sucros  59.6       7 0.00018   19.0   2.2   37  229-268   389-426 (550)
238 TIGR02823 oxido_YhdH putative   59.5     6.5 0.00017   19.2   2.1  152  160-322    65-259 (330)
239 COG0533 QRI7 Metal-dependent p  58.9     7.4 0.00019   18.9   2.3   34   56-91     54-87  (342)
240 PRK06352 threonine synthase; V  58.8      14 0.00035   17.2   4.2   50  267-316   263-319 (351)
241 TIGR00080 pimt protein-L-isoas  56.5     7.5 0.00019   18.8   1.9   50   89-145    66-118 (228)
242 pfam00012 HSP70 Hsp70 protein.  56.3      15 0.00038   16.9   6.6   51  221-271   302-355 (598)
243 COG3894 Uncharacterized metal-  54.3      16 0.00041   16.7   8.1   65  226-291   475-540 (614)
244 TIGR00289 TIGR00289 conserved   53.4     8.7 0.00022   18.4   1.9   28   74-102    90-117 (227)
245 COG2518 Pcm Protein-L-isoaspar  51.9      11 0.00029   17.7   2.2   32   87-119    56-88  (209)
246 COG1448 TyrB Aspartate/tyrosin  51.7      15 0.00037   17.0   2.8   33  241-280   334-366 (396)
247 COG2073 CbiG Cobalamin biosynt  51.6      18 0.00045   16.4   7.0   86  225-319   209-296 (298)
248 pfam01968 Hydantoinase_A Hydan  51.5      18 0.00045   16.4   4.5   51  218-268   210-260 (285)
249 PTZ00145 phosphoribosylpyropho  51.5      18 0.00045   16.4   3.5   82   61-144   194-294 (443)
250 PTZ00340 O-sialoglycoprotein e  51.0      18 0.00046   16.4   4.1   33   57-91     61-93  (348)
251 TIGR03285 methan_mark_14 putat  50.7      16  0.0004   16.8   2.8   33   49-81     62-94  (445)
252 cd06449 ACCD Aminocyclopropane  50.5      18 0.00047   16.3   7.0   32  282-313   276-307 (307)
253 TIGR01991 HscA Fe-S protein as  50.1      13 0.00034   17.2   2.4  106   56-169   322-448 (628)
254 TIGR01921 DAP-DH diaminopimela  50.0      19 0.00048   16.3   4.6  117    1-141     1-122 (326)
255 PRK02628 nadE NAD synthetase;   48.2      17 0.00044   16.5   2.7   53  232-284   383-446 (678)
256 KOG2509 consensus               48.0      20 0.00051   16.1   5.6   21  283-303   402-422 (455)
257 PRK12338 hypothetical protein;  47.9      20 0.00051   16.1   5.3   43  229-271   221-273 (320)
258 TIGR02810 agaZ_gatZ D-tagatose  47.0     6.1 0.00016   19.4   0.3   60   38-103   115-198 (430)
259 COG2377 Predicted molecular ch  45.8      17 0.00045   16.5   2.4   60   52-112    71-143 (371)
260 cd01714 ETF_beta The electron   45.7      22 0.00056   15.9   3.1   28  118-145    92-120 (202)
261 PRK03359 putative electron tra  45.3      22 0.00056   15.8   3.2   12  133-144   112-123 (256)
262 COG0241 HisB Histidinol phosph  44.7      23 0.00058   15.8   3.5   54  225-279    70-132 (181)
263 TIGR02350 prok_dnaK chaperone   44.4      23 0.00058   15.7   4.4   72  222-304   303-377 (598)
264 pfam02887 PK_C Pyruvate kinase  44.2      23 0.00059   15.7   3.3   25  287-311    77-101 (117)
265 PRK13609 diacylglycerol glucos  43.5      14 0.00036   17.0   1.7   80   60-142   158-240 (388)
266 PRK00950 histidinol-phosphate   43.4      24  0.0006   15.6   5.1   28    4-33      9-36  (369)
267 KOG1015 consensus               43.4      17 0.00042   16.6   2.0   91   39-141   641-737 (1567)
268 PRK11921 metallo-beta-lactamas  42.5      24 0.00062   15.5   7.3   19   69-87     65-83  (395)
269 KOG2708 consensus               42.3      17 0.00044   16.5   2.0   91   57-160    54-151 (336)
270 PRK05452 anaerobic nitric oxid  40.8      26 0.00066   15.4   7.6   20   68-87     66-85  (479)
271 TIGR01485 SPP_plant-cyano sucr  39.0      28  0.0007   15.2   3.1   53  221-274   131-194 (257)
272 cd04333 ProX_deacylase This CD  39.0      26 0.00068   15.3   2.5   10   60-69      4-13  (148)
273 pfam12244 DUF3606 Protein of u  38.9      28 0.00071   15.2   2.8   42  240-283     7-48  (57)
274 PRK12342 putative electron tra  38.7      28 0.00071   15.2   3.1   11  133-143   109-119 (254)
275 PRK03910 D-cysteine desulfhydr  38.4      28 0.00072   15.1   5.5   32  282-313   287-318 (331)
276 TIGR00014 arsC arsenate reduct  38.0      29 0.00073   15.1   3.1   44  230-274    14-58  (114)
277 TIGR01341 aconitase_1 aconitat  37.7      29 0.00074   15.1   5.1   70   15-87     39-120 (896)
278 COG4977 Transcriptional regula  37.2      28 0.00072   15.1   2.4   12  106-117    76-87  (328)
279 pfam01411 tRNA-synt_2c tRNA sy  37.0      30 0.00076   15.0   3.3   21   60-80    102-123 (545)
280 pfam11294 DUF3095 Protein of u  36.7     8.7 0.00022   18.4  -0.3   16  119-134   146-161 (373)
281 TIGR02684 dnstrm_HI1420 probab  36.5      26 0.00065   15.4   2.1   64  225-288    15-78  (91)
282 cd01781 AF6_RA_repeat2 The AF-  35.6      19 0.00048   16.3   1.3   30  225-254    26-55  (100)
283 TIGR02249 integrase_gron integ  35.4      26 0.00067   15.4   2.0   63  226-288   246-317 (320)
284 PRK11706 TDP-4-oxo-6-deoxy-D-g  34.8      22 0.00056   15.8   1.6   69   33-115    39-108 (375)
285 PRK03321 putative aminotransfe  34.8      32 0.00082   14.8   5.6   67    5-80      8-81  (352)
286 PRK13929 rod-share determining  34.6      32 0.00081   14.8   2.3   74  220-294   251-330 (335)
287 PRK02947 hypothetical protein;  34.0      17 0.00044   16.5   0.9   15   89-103    93-107 (247)
288 PTZ00122 phosphoglycerate muta  33.7      33 0.00085   14.7   3.8   73  227-315   213-287 (296)
289 PRK13980 NAD synthetase; Provi  33.6      34 0.00086   14.7   3.1  121   36-167    24-159 (264)
290 COG1058 CinA Predicted nucleot  33.1      34 0.00087   14.6   6.5   83    1-102     1-89  (255)
291 KOG4230 consensus               32.9      35 0.00088   14.6   4.5   20   58-78    286-305 (935)
292 TIGR01993 Pyr-5-nucltdase pyri  30.7      28  0.0007   15.2   1.5   21  252-272   161-182 (205)
293 TIGR02365 dha_L_ycgS dihydroxy  30.6      23 0.00058   15.7   1.0   14  279-292   181-196 (200)
294 cd03749 proteasome_alpha_type_  30.0      39 0.00098   14.3   2.2   30  220-249   179-209 (211)
295 TIGR01265 tyr_nico_aTase tyros  29.8      36 0.00091   14.5   1.9   79   49-137    53-139 (424)
296 PRK06851 hypothetical protein;  29.6      39   0.001   14.2   5.2   55   47-101    39-109 (368)
297 PRK11678 putative chaperone; P  29.5      39   0.001   14.2   2.4   18  291-309   389-406 (450)
298 TIGR00011 YbaK_EbsC ybaK/ebsC   29.3      29 0.00073   15.1   1.4   47   33-83      5-54  (156)
299 TIGR00454 TIGR00454 conserved   29.1      40   0.001   14.2   3.5   65   74-143    44-109 (204)
300 PRK07475 hypothetical protein;  28.8      40   0.001   14.2   2.9   70   51-142    63-133 (243)
301 cd03752 proteasome_alpha_type_  28.4      41   0.001   14.1   2.2   28  221-248   184-211 (213)
302 pfam02540 NAD_synthase NAD syn  27.9      39 0.00099   14.3   1.9   29   91-120    64-92  (243)
303 COG0245 IspF 2C-methyl-D-eryth  27.5      42  0.0011   14.0   3.1   56  228-283    77-141 (159)
304 COG1214 Inactive homolog of me  27.5      43  0.0011   14.0   4.0   40   43-82     28-67  (220)
305 PRK12390 1-aminocyclopropane-1  27.3      43  0.0011   14.0   5.0   32  282-313   293-324 (337)
306 KOG1359 consensus               26.8      32 0.00081   14.8   1.3   89   56-145    86-205 (417)
307 TIGR00417 speE spermidine synt  26.8      32 0.00082   14.8   1.3   47  225-271   175-222 (284)
308 PRK10222 L-ascorbate-specific   26.7      38 0.00098   14.3   1.7   10  280-289    30-39  (85)
309 TIGR00329 gcp metalloendopepti  26.1      45  0.0011   13.8   2.2   41   59-101    60-102 (337)
310 pfam02685 Glucokinase Glucokin  25.7      46  0.0012   13.8   3.4   48   58-105    40-96  (316)
311 pfam01890 CbiG_C Cobalamin syn  25.5      46  0.0012   13.8   4.0   43  226-268    16-60  (121)
312 COG0443 DnaK Molecular chapero  25.4      46  0.0012   13.8   3.9   49  223-271   288-339 (579)
313 pfam09887 DUF2114 Uncharacteri  25.4      46  0.0012   13.8   3.0   33   49-81     64-97  (448)
314 TIGR02133 RPI_actino ribose 5-  25.3      47  0.0012   13.7   2.7   58   44-107    37-94  (154)
315 PRK00292 glk glucokinase; Prov  24.9      47  0.0012   13.7   3.4   44   59-105    43-95  (315)
316 PRK00084 ispF 2-C-methyl-D-ery  24.9      47  0.0012   13.7   2.6   56  227-282    78-142 (159)
317 TIGR02177 PorB_KorB 2-oxoacid:  24.8      48  0.0012   13.7   2.9   86  220-306   158-248 (302)
318 pfam01902 ATP_bind_4 ATP-bindi  24.7      48  0.0012   13.7   2.3   68   58-141    75-143 (219)
319 TIGR01693 UTase_glnD protein-P  23.7      50  0.0013   13.6   2.1   52   49-100   511-572 (903)
320 TIGR01393 lepA GTP-binding pro  23.4      47  0.0012   13.7   1.6  110    6-128   235-358 (598)
321 COG2971 Predicted N-acetylgluc  23.3      51  0.0013   13.5   2.2  109   50-169    45-159 (301)
322 PRK05449 aspartate alpha-decar  23.2      17 0.00042   16.6  -0.8   16  131-146    40-55  (126)
323 pfam07700 HNOB Heme NO binding  23.2      51  0.0013   13.5   3.9   44   57-102    19-62  (171)
324 TIGR03588 PseC UDP-4-keto-6-de  23.1      49  0.0013   13.6   1.7   68   34-115    38-106 (380)
325 COG0426 FpaA Uncharacterized f  22.8      41   0.001   14.1   1.2   43   49-101    53-95  (388)
326 PRK07027 cobalamin biosynthesi  22.8      52  0.0013   13.4   3.6   42  227-268    19-62  (126)
327 TIGR01120 rpiB ribose 5-phosph  22.8      36 0.00091   14.5   0.9   11   89-99     42-52  (143)
328 COG5499 Predicted transcriptio  22.7      52  0.0013   13.4   2.9   46  227-272    61-118 (120)
329 PRK01584 alanyl-tRNA synthetas  22.7      52  0.0013   13.4   2.9   10   65-74    143-152 (593)
330 COG0825 AccA Acetyl-CoA carbox  22.7      36 0.00091   14.5   0.9   69   95-168   181-250 (317)
331 PRK09483 response regulator; P  22.5      53  0.0013   13.4   2.8   94   54-168    11-104 (216)
332 TIGR02802 Pal_lipo peptidoglyc  22.5      53  0.0013   13.4   2.8   69   25-94     17-94  (104)
333 cd06221 sulfite_reductase_like  22.4      53  0.0014   13.4   2.0   55  233-287   179-239 (253)
334 TIGR01264 tyr_amTase_E tyrosin  22.2      53  0.0014   13.4   1.8   84   49-137    47-132 (415)
335 PRK02731 histidinol-phosphate   22.1      54  0.0014   13.4   5.5   24    4-29      8-31  (367)
336 TIGR01428 HAD_type_II haloacid  22.0      54  0.0014   13.3   2.9   44  228-274   126-179 (207)
337 PRK12615 galactose-6-phosphate  22.0      48  0.0012   13.7   1.4   29   51-83     41-69  (171)
338 PRK13520 L-tyrosine decarboxyl  21.9      54  0.0014   13.3   3.9   66   53-125    37-102 (375)
339 PRK11658 UDP-4-amino-4-deoxy-L  21.9      51  0.0013   13.5   1.5   59   34-106    42-100 (379)
340 pfam02261 Asp_decarbox Asparta  21.7      19 0.00049   16.2  -0.7   16  131-146    40-55  (116)
341 PRK05472 redox-sensing transcr  21.5      55  0.0014   13.3   3.7   18  126-143    78-95  (211)
342 TIGR02638 lactal_redase lactal  21.5      18 0.00046   16.4  -0.9   53   39-101    28-81  (380)
343 TIGR01136 cysKM cysteine synth  21.3      56  0.0014   13.3   2.2   82   55-142    45-146 (315)
344 TIGR03286 methan_mark_15 putat  21.3      56  0.0014   13.3   2.0   14   71-84     70-83  (404)
345 cd01994 Alpha_ANH_like_IV This  21.2      56  0.0014   13.2   2.3   58   73-141    88-146 (194)
346 TIGR00761 argB acetylglutamate  21.1      56  0.0014   13.2   2.5   21   22-42     47-67  (254)
347 PRK13505 formate--tetrahydrofo  20.8      57  0.0015   13.2   3.2   11  307-317   513-523 (556)
348 TIGR02698 CopY_TcrY copper tra  20.7      50  0.0013   13.6   1.3   37  212-248    73-110 (130)
349 PRK04152 consensus              20.6      58  0.0015   13.2   5.5   28    5-34      6-33  (364)
350 pfam09663 Amido_AtzD_TrzD Amid  20.5      58  0.0015   13.1   2.5   74   52-135   130-208 (365)
351 PRK11493 sseA 3-mercaptopyruva  20.5      50  0.0013   13.6   1.2   57   58-123    73-129 (281)
352 PRK04761 ppnK inorganic polyph  20.4      58  0.0015   13.1   2.7   59   54-118     5-64  (246)
353 KOG3157 consensus               20.4      55  0.0014   13.3   1.5   31  257-292   191-221 (244)
354 PRK10729 nudF ADP-ribose pyrop  20.3      58  0.0015   13.1   3.8   18  230-247   101-118 (202)

No 1  
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III; InterPro: IPR004655   Beta-ketoacyl-acyl carrier protein synthase III (FabH), in general, initiates elongation in type II fatty acid synthase systems found in bacteria and plants. It is responsible for producing the multitude of fatty acid structures found in bacterial membranes . The two members of this subfamily from Bacillus subtilis differ from each other, and from FabH from Escherichia coli, in acyl group specificity. Active site residues include Cys112, His244 and Asn274 of Escherichia coli FabH. Cys-112 is the site of acyl group attachment. ; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process.
Probab=100.00  E-value=0  Score=619.96  Aligned_cols=319  Identities=48%  Similarity=0.801  Sum_probs=306.4

Q ss_pred             CEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf             22699999996498411788999880999878110247518898289889999999999999974021235443366501
Q gi|254780497|r    2 IRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVAT   81 (324)
Q Consensus         2 ~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s   81 (324)
                      |+++|.|+|.|+|+++++|+||+++.++++|||..||||++||++.++|.+++|+.+||++||++|+++++|||+||++|
T Consensus         1 ~~~~i~g~G~YlP~~v~tNadL~k~vDTSDEWI~TRTGI~eRRiAad~E~~S~mg~~AA~~Aie~A~i~~~dID~iivaT   80 (329)
T TIGR00747         1 MKAKILGTGSYLPEKVLTNADLEKMVDTSDEWIVTRTGIKERRIAADDETSSHMGFEAAKKAIENAGISKDDIDLIIVAT   80 (329)
T ss_pred             CEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEC
T ss_conf             93578986030775135733345321068331123686100021472012689999999999985278866878679805


Q ss_pred             CCCCC-CCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf             22334-58985310011220268644442101220034678889989641556531676302243222456632323454
Q gi|254780497|r   82 STPDQ-TFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGD  160 (324)
Q Consensus        82 ~~~~~-~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGD  160 (324)
                      .+||+ .+||.|++|+..||++++++||++.+|+||+++|.+|.+||++|.++++|||++|+.|+.+||+||++++||||
T Consensus        81 ~~pd~l~fPS~Ac~~~~~LGi~~~~aFD~~AACaGF~Y~Ls~A~~~i~SG~y~~vLvvGaeklSs~~D~~DR~TcvLFGD  160 (329)
T TIGR00747        81 TTPDYLAFPSAACMVQAYLGIKNIPAFDLSAACAGFIYGLSVAKQYIESGKYKTVLVVGAEKLSSTLDWTDRGTCVLFGD  160 (329)
T ss_pred             CCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEECC
T ss_conf             78000037785899997618667632223656766899999999986157702688998511055367466875799606


Q ss_pred             CCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCC--------CCCCCCHHHCCHHHHHHHHHHHHHHHH
Q ss_conf             431234402654465434454101232035555561775487654--------443320010320244455777777788
Q gi|254780497|r  161 GAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPST--------SRTVGCIRMEGKAVFKYAVEKAVELIE  232 (324)
Q Consensus       161 GAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~g~~~~~~~~~~~~~~i~  232 (324)
                      ||+|+||++.+..+.    .+|+++++++||++.+.++.+.....        .....++.|+|+++|+++++.|.+.++
T Consensus       161 GAgA~v~g~s~~~~~----~eI~~~~l~AdG~~~~~L~l~~~~~~~P~~~~~~~~~~~f~~M~G~evFk~Av~~m~~~~~  236 (329)
T TIGR00747       161 GAGAVVVGESEDDGG----LEIISTNLGADGTQGELLYLPAGGRRCPFSKNTLQGSSPFITMEGNEVFKHAVRKMLKVVE  236 (329)
T ss_pred             CCEEEEEECCCCCCC----CEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf             722688704578776----3012346530564432132067776688777734466661787373258899999999999


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH-HCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEE
Q ss_conf             8898740010001210244444158999999719787673365865-193301269999999998068899989999997
Q gi|254780497|r  233 KVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDI-HGNTSAASIPLALAVAVKEGRVKKGDCLLLEAM  311 (324)
Q Consensus       233 ~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~-~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~  311 (324)
                      ++|++++++++|||||||||+|.+++++++|+|++++|+++.|+++ ||||++||||++|++++++|++|+||.+||.+|
T Consensus       237 ~~l~~a~l~~~DiD~lvPHQAN~RIi~a~ak~L~~~~~~Vv~Tv~khyGNTSAASiP~AL~E~~~~G~iK~Gd~~LL~AF  316 (329)
T TIGR00747       237 ETLEAAGLSKEDIDWLVPHQANIRIIEALAKRLELKESKVVKTVHKHYGNTSAASIPIALDELLETGRIKKGDLLLLVAF  316 (329)
T ss_pred             HHHHHHCCCHHHCCEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEE
T ss_conf             99997187830461555541116899999997089803168632001346304346678999874177772448887630


Q ss_pred             CCCCCEEEEEEEC
Q ss_conf             1450145687869
Q gi|254780497|r  312 GGGFTSGTVLLRW  324 (324)
Q Consensus       312 G~G~s~~a~llrw  324 (324)
                      |+|+|||++++||
T Consensus       317 GGGLtWGa~~vr~  329 (329)
T TIGR00747       317 GGGLTWGAALVRF  329 (329)
T ss_pred             CHHHHHHHHHHCC
T ss_conf             6035667775259


No 2  
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00  E-value=0  Score=567.20  Aligned_cols=317  Identities=56%  Similarity=0.901  Sum_probs=303.1

Q ss_pred             CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf             92269999999649841178899988099987811024751889828988999999999999997402123544336650
Q gi|254780497|r    1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVA   80 (324)
Q Consensus         1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~   80 (324)
                      ||+++|+|+|.|+|+++|+|+|++++++.+++||.+++||++|||++++|+++|||++|+++||+++|++|+|||+||++
T Consensus         1 m~~a~I~g~g~ylP~~~v~n~el~~~~~~~~~~i~~~tGI~~R~~a~~~e~~~~ma~~Aa~~aL~~ag~~~~dIdlli~~   80 (319)
T PRK09352          1 MMYAKILGTGSYLPERVVTNDDLEKMVDTSDEWIVTRTGIKERRIAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIVA   80 (319)
T ss_pred             CCCCEEEEEEEECCCCEECHHHHHHHCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEE
T ss_conf             96338989999789965869999987199889997564945899889999999999999999999759898899799997


Q ss_pred             CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf             12233458985310011220268644442101220034678889989641556531676302243222456632323454
Q gi|254780497|r   81 TSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGD  160 (324)
Q Consensus        81 s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGD  160 (324)
                      |++||+.+|++|++||++||++++++|||+++|+|++.||++|..++++|.++++|||++|.+|+.+||+|+.++++|||
T Consensus        81 t~t~d~~~P~~a~~v~~~LGl~~~~~fDi~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGD  160 (319)
T PRK09352         81 TTTPDYLFPSTACLVQARLGAKNAPAFDLSAACSGFVYALSTADQFIRSGAYKNALVIGAEKLSRIVDWTDRSTCVLFGD  160 (319)
T ss_pred             ECCCCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHCCCCCCCCCCHHEEEECC
T ss_conf             41789989669999999978999737537434568999999999998669876269961101014245555000166158


Q ss_pred             CCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCC--CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             43123440265446543445410123203555556177548765444--3320010320244455777777788889874
Q gi|254780497|r  161 GAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSR--TVGCIRMEGKAVFKYAVEKAVELIEKVFDST  238 (324)
Q Consensus       161 GAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~  238 (324)
                      ||+|+||++.+..       ++++.++++|+.+.+.++.+.++...+  ...+++|+|+++|+++++.+++.++++|+++
T Consensus       161 GAaA~vl~~~~~~-------~~~~~~~~tdg~~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~a~~~~~~~i~~~L~~~  233 (319)
T PRK09352        161 GAGAVVLEASEEP-------GILSTHLGSDGSGGDLLYLPGGGSRGPASGETYLRMEGREVFKFAVREMAKVAREALEAA  233 (319)
T ss_pred             CCCEEEEEECCCC-------CEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             5007999754888-------736899997488887589678888898787754676449999999985499999999874


Q ss_pred             HCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEE
Q ss_conf             00100012102444441589999997197876733658651933012699999999980688999899999971450145
Q gi|254780497|r  239 HLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFTSG  318 (324)
Q Consensus       239 gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~  318 (324)
                      |++++|||||++||+|+++++.++++||+|+||++.++++||||+|+|+|++|++++++|++++||+|+|++||+|++|+
T Consensus       234 gl~~~dId~~i~Hq~~~~~~~~~~~~lgi~~ek~~~~l~~~GNt~sasipi~L~~~~~~g~lk~Gd~vll~~~G~G~s~~  313 (319)
T PRK09352        234 GLTPEDIDWLVPHQANLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWG  313 (319)
T ss_pred             CCCHHHCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHEEE
T ss_conf             99832387899826768999999998197988856548753845887899999999983999997999999984474317


Q ss_pred             EEEEEC
Q ss_conf             687869
Q gi|254780497|r  319 TVLLRW  324 (324)
Q Consensus       319 a~llrw  324 (324)
                      ++++||
T Consensus       314 ~~vlrw  319 (319)
T PRK09352        314 AALVRW  319 (319)
T ss_pred             EEEEEC
T ss_conf             889979


No 3  
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00  E-value=0  Score=566.56  Aligned_cols=318  Identities=58%  Similarity=0.921  Sum_probs=305.6

Q ss_pred             CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf             92269999999649841178899988099987811024751889828988999999999999997402123544336650
Q gi|254780497|r    1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVA   80 (324)
Q Consensus         1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~   80 (324)
                      ||+++|.|+|.|+|+++++|++++++.++++|||..++||++||++.++|+.++|+++|+++||+++|++|+|||+||++
T Consensus         1 ~~~a~i~g~G~~lP~~~vtn~d~e~~~~tsdewI~~rtGir~R~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~a   80 (323)
T COG0332           1 MMNAKILGIGSYLPERVVTNADLEKRVDTSDEWIETRTGIRERRIAADDETTSDLAVEAARKALEDAGISPDDIDLIIVA   80 (323)
T ss_pred             CCCCEEEEEEEECCCCCCCHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEE
T ss_conf             98526998885268765577889853688711055303771123169995477899999999999869998999889996


Q ss_pred             CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf             12233458985310011220268644442101220034678889989641556531676302243222456632323454
Q gi|254780497|r   81 TSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGD  160 (324)
Q Consensus        81 s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGD  160 (324)
                      |++||+++|++|++||++||++++.+||++.+|+||++||++|..+|++|.++++|||++|.+|+++||+||.++++|||
T Consensus        81 T~tpd~~~Ps~A~~vq~~LG~~~~~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVgae~~S~~ld~~dR~t~vlFgD  160 (323)
T COG0332          81 TSTPDHLFPSTACLVQARLGLGGAPAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRILDWTDRDTCVLFGD  160 (323)
T ss_pred             CCCCCCCCCHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCHHHCCCEEEECC
T ss_conf             67866668817999999858998666660535599999999999999758977799981058404588766561289737


Q ss_pred             CCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCC---CC-CCCHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             4312344026544654344541012320355555617754876544---43-3200103202444557777777888898
Q gi|254780497|r  161 GAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTS---RT-VGCIRMEGKAVFKYAVEKAVELIEKVFD  236 (324)
Q Consensus       161 GAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~g~~~~~~~~~~~~~~i~~~L~  236 (324)
                      ||+|+||++.+      .+.+++.+.+.+|+++.+..+.++.....   .. ...+.|+|+++|+++++.+++.++++|+
T Consensus       161 GAgAvvl~~~~------~~~~i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~  234 (323)
T COG0332         161 GAGAVVLEATE------DDNGILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPKAIEEVLE  234 (323)
T ss_pred             CCEEEEEECCC------CCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHH
T ss_conf             73599983578------776623423323566787442267777666444565323544588999999999999999999


Q ss_pred             HHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf             74001000121024444415899999971978767336586519330126999999999806889998999999714501
Q gi|254780497|r  237 STHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFT  316 (324)
Q Consensus       237 ~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s  316 (324)
                      +++++++|||||+|||+|.++++.++++|++|+||++.++++||||++||+|++|++++++|++++||+++|++||+|++
T Consensus       235 ~~~l~~~dId~~vpHQan~ri~~~i~~~l~~~~~k~~~~~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~vll~~fG~Glt  314 (323)
T COG0332         235 KAGLTPEDIDWFVPHQANLRIIEAIAKKLGIPEEKVVVTVDKYGNTSAASIPLALDEALREGRIKPGDLVLLEAFGGGLT  314 (323)
T ss_pred             HCCCCHHHCCEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCE
T ss_conf             84999889988720645499999999982998899756898755463230899999874508989998999993037532


Q ss_pred             EEEEEEEC
Q ss_conf             45687869
Q gi|254780497|r  317 SGTVLLRW  324 (324)
Q Consensus       317 ~~a~llrw  324 (324)
                      ||++++||
T Consensus       315 wg~~~~r~  322 (323)
T COG0332         315 WGAALVRW  322 (323)
T ss_pred             EEEEEEEE
T ss_conf             13699982


No 4  
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00  E-value=0  Score=550.75  Aligned_cols=317  Identities=32%  Similarity=0.453  Sum_probs=278.6

Q ss_pred             CEEEEEEEEEECCCCEECHHHHHH------------------------HHCCCHHHHHHCCCCCEEEEECC---------
Q ss_conf             226999999964984117889998------------------------80999878110247518898289---------
Q gi|254780497|r    2 IRSTVRGIGLSLPRRVLSNSDLES------------------------IVDTSDGWIKRRVGISRRHIAGK---------   48 (324)
Q Consensus         2 ~~~~I~~~g~ylP~~~v~~~el~~------------------------~~~~~~~~i~~~~GI~~R~~~~~---------   48 (324)
                      +|++|.|+|+|+|+++|+|+||.+                        ..+.++|||.++|||++||++++         
T Consensus         1 ~n~~I~g~G~y~P~~vvtN~dl~~~~~~~~~~~~~~~~~~~~~~~~e~~vdtsdeWI~~rtGI~~R~i~~~~g~~~~~~~   80 (372)
T PRK07515          1 HNVVISGTGLYTPPESISNEELVESFNAYVDQFNAENAAAIEAGEVEALPPSSSEFIEKASGIKSRYVMEKEGILDPERM   80 (372)
T ss_pred             CCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCHHC
T ss_conf             96199997887799510489999877655544200003332134310255675677664246467775235676660001


Q ss_pred             ---------CC--CHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHH
Q ss_conf             ---------88--9999999999999974021235443366501223345898531001122026864444210122003
Q gi|254780497|r   49 ---------DE--TTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFV  117 (324)
Q Consensus        49 ---------~e--~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~  117 (324)
                               +|  ..+|||++|+++||+++|++|+|||+||++|++||+.+|++|++||++||++ +.+|||+.+|+||+
T Consensus        81 ~p~~~~~~~d~~~~~sdma~~AA~~AL~~Agi~~~dIDlIIvaT~tpd~~~PstA~~vq~~LG~~-~~afDi~aaCsGfv  159 (372)
T PRK07515         81 RPRIPERSNDELSIQAEMGVAAARQALERAGKTAADIDGVIVACSNMQRAYPAMAIEIQEALGIE-GFAFDMNVACSSAT  159 (372)
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCHHHHHHHHHCCC-CEEHHHHCCCHHHH
T ss_conf             43333456643113799999999999998499989999999976888888972999999984898-42043614086899


Q ss_pred             HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCE
Q ss_conf             46788899896415565316763022432224566323234544312344026544654344541012320355555617
Q gi|254780497|r  118 YAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKL  197 (324)
Q Consensus       118 ~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (324)
                      +||.+|.+||++|.++++|||++|.+|+++||+||.++++|||||+|+||++.+.... ...+++++++..++..  +..
T Consensus       160 yaL~~A~~~I~sg~~k~vLVVgaE~~S~~~d~~DR~t~~LFGDGAgAvvle~~~~~~~-~~~~~il~~~~~t~~s--~~i  236 (372)
T PRK07515        160 FGIQTAANAIRSGSARRVLVVNPEICSGHLNFRDRDSHFIFGDVATAVIVERADTATS-AGGFEILSTRLFTQFS--NNI  236 (372)
T ss_pred             HHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCCCEEEECCCCEEEEEEECCCCCC-CCCCEEEECCCCCCCC--CCC
T ss_conf             9999999999718987479953423033627678770477616530246641146888-7774156656346656--664


Q ss_pred             EECC-------CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHC---CC
Q ss_conf             7548-------7654443320010320244455777777788889874001000121024444415899999971---97
Q gi|254780497|r  198 YVDG-------GPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKM---KI  267 (324)
Q Consensus       198 ~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~l---gl  267 (324)
                      ..++       .........+++|+|+++|+++++.+++.++++|+++|++++|||+|++||+|.++++.++++|   ++
T Consensus       237 ~~~~g~~~~~~~~~~~~~~~~~~m~G~~Vfk~av~~~~~~i~~~L~~~gl~~~DId~~v~HQAN~rii~~i~k~llg~~~  316 (372)
T PRK07515        237 RNNFGFLNRAEPEGAGDADKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTPADVKRLWLHQANINMNQLIGKKVLGRDA  316 (372)
T ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHHHHHHHHCCCCC
T ss_conf             45788667677678876331114417899999999999999999998298988899998677899999999998545899


Q ss_pred             CHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEEEC
Q ss_conf             876733658651933012699999999980688999899999971450145687869
Q gi|254780497|r  268 PFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFTSGTVLLRW  324 (324)
Q Consensus       268 ~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~a~llrw  324 (324)
                      +++|++.++++||||+|||+|++|++.  .+++++||+++|++||+|++||++++||
T Consensus       317 ~~~k~~~~i~~yGNTssASiplaL~~~--~~~ik~Gd~vll~gfGaGltwGa~llr~  371 (372)
T PRK07515        317 TPEEAPVILDEYANTSSAGSIIAFHKH--SDDLAAGDLGVICSFGAGYSIGSVIVRK  371 (372)
T ss_pred             CHHHHEEHHHHCCCHHHHHHHHHHHHH--HCCCCCCCEEEEEEEEHHHHHHHHHEEC
T ss_conf             988832207411847888999999998--4867899989999987798568743362


No 5  
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00  E-value=0  Score=542.68  Aligned_cols=318  Identities=45%  Similarity=0.768  Sum_probs=299.7

Q ss_pred             CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf             92269999999649841178899988099987811024751889828988999999999999997402123544336650
Q gi|254780497|r    1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVA   80 (324)
Q Consensus         1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~   80 (324)
                      |.+++|+|+|+|+|+++|+|+|++++++.+++||.+++||++||+++++|+++|||++|+++||+++|++|+|||+||++
T Consensus         2 ~~~~~I~g~g~ylP~~~v~n~~~~~~~~~~~~~i~~~~Gi~~R~~a~~~e~~~dma~~Aa~~aL~~ag~~~~dIdllI~~   81 (326)
T PRK12879          2 MSYARITGWGKYVPPRVLTNDDLATFIDTSDEWIVQRTGIKERRIAHVNEFTSDLAIKAAERALARAGLDASDIDLIIVA   81 (326)
T ss_pred             CCCCEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEE
T ss_conf             97778999999889965859999988099888998644964899889999999999999999999759798899699995


Q ss_pred             CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf             12233458985310011220268644442101220034678889989641556531676302243222456632323454
Q gi|254780497|r   81 TSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGD  160 (324)
Q Consensus        81 s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGD  160 (324)
                      |++||+..|++|++|+++||++++.+|||+++|+|++.||++|.+++++|+.+++|||++|.+|+.+|+.++.++++|||
T Consensus        82 t~~~d~~~P~~a~~v~~~LGl~~~~~fdi~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~e~~s~~~d~~~~~~~~lfGD  161 (326)
T PRK12879         82 TTTPDYLFPSTASQVQARLGIPNAAAFDINAACSGFLYGLELANGLITSGSYKKVLVIGAERLSKYTDWTDRTTAILFGD  161 (326)
T ss_pred             CCCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHCCCCCCCCCHHHHHCCCC
T ss_conf             26789827759999999868499514540122037999999999998668755036502022135324354333210178


Q ss_pred             CCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCC------CCCCCCHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf             431234402654465434454101232035555561775487654------44332001032024445577777778888
Q gi|254780497|r  161 GAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPST------SRTVGCIRMEGKAVFKYAVEKAVELIEKV  234 (324)
Q Consensus       161 GAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~~i~~~  234 (324)
                      ||+|+||++++..      .++++.++.++++..+.+..++.+..      ......+.++|+++|+++.+.+++.++++
T Consensus       162 GAaA~ll~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~  235 (326)
T PRK12879        162 GAGAVVVEATEEP------PGLIDYVLGTDGDGGDILYRTGLGTTMDRFDLDNGGFYFQFNGREVFKWAVRGMPKAAKQV  235 (326)
T ss_pred             CCEEEEEEECCCC------CCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHH
T ss_conf             6338998724888------8347899985377766588347887688755335675078642999999987569999999


Q ss_pred             HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC
Q ss_conf             98740010001210244444158999999719787673365865193301269999999998068899989999997145
Q gi|254780497|r  235 FDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGG  314 (324)
Q Consensus       235 L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G  314 (324)
                      |+++|++++|||+|++||+|+++++.++++||+|+||++.++++|||++|+|+|++|++++++++++|||+|++++||+|
T Consensus       236 L~~~gl~~~did~~i~Hq~~~~~~~~i~~~Lgl~~~k~~~~l~~~GN~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G  315 (326)
T PRK12879        236 LEKAGLTKDDIDWVIPHQANLRIIESLCEKLGIPLEKTLVNVEYYGNTSAATIPLALCLALEQGKIKPGDTLLLYGFGAG  315 (326)
T ss_pred             HHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHH
T ss_conf             99859997788989986887899999999809798885656732274377789999999997399999699999999167


Q ss_pred             CCEEEEEEEC
Q ss_conf             0145687869
Q gi|254780497|r  315 FTSGTVLLRW  324 (324)
Q Consensus       315 ~s~~a~llrw  324 (324)
                      ++|+++++||
T Consensus       316 ~s~~~~~~rw  325 (326)
T PRK12879        316 LTWAALLVKW  325 (326)
T ss_pred             HHHEEEEEEE
T ss_conf             3224899997


No 6  
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00  E-value=0  Score=543.56  Aligned_cols=317  Identities=30%  Similarity=0.532  Sum_probs=290.7

Q ss_pred             CC-EEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEE
Q ss_conf             92-26999999964984117889998809998781102475188982898899999999999999740212354433665
Q gi|254780497|r    1 MI-RSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIV   79 (324)
Q Consensus         1 M~-~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~   79 (324)
                      |. +|+|+|+|+|+|+++|+|+|++++++.+++||.++|||++|||+ ++|+++|||++|+++||++++++|+|||+||+
T Consensus         1 m~~~v~I~g~g~ylP~~~v~n~el~~~~~~~~~~i~~~tGI~~R~~a-~~e~~sdma~~Aa~~aL~~agi~~~dIdliI~   79 (329)
T PRK07204          1 MKRYISIKGIGTYLPKRKVDSLEIDKMLDVPEGWTLKKAGVKTRYFV-DGETSSYMGAEAAKKAVEDAKLTWDDIDCIIC   79 (329)
T ss_pred             CCCCEEEEEEEEECCCCEECHHHHHHHCCCCHHHHHHCCCCEEEEEC-CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEE
T ss_conf             99854999999966997285999998809987999762386168557-99985999999999999975989888849999


Q ss_pred             ECCCCCCCCCCCCCCHHHHHHCCCC--CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf             0122334589853100112202686--44442101220034678889989641556531676302243222456632323
Q gi|254780497|r   80 ATSTPDQTFPSTAVNIQNRLGMKRG--FAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVL  157 (324)
Q Consensus        80 ~s~~~~~~~p~~a~~i~~~LGl~~~--~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~l  157 (324)
                      +|++||+++|++|++||++||++++  .+|||+++|+|+++||++|..+|++|+++++|||++|.+|+.+||.++.++++
T Consensus        80 ~s~t~d~~~P~~A~~v~~~LGl~~~~~~afDi~~aC~g~~~al~~A~~~i~~g~~~~~Lvv~~e~~S~~~d~~~~~~~~l  159 (329)
T PRK07204         80 GSGTIQQAIPSTASLIQEQLGLQHSGIPCFDINSTCLSFITALDTISYAIECGRYKNVVIISSEISSVGLNWGQNESSIL  159 (329)
T ss_pred             ECCCCCCCCCCHHHHHHHHHCCCCCCCEEEEHHHHCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCE
T ss_conf             25789988980999999996478888355003011448999999999998669865258960334554436444331201


Q ss_pred             CCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCC---------CCCCCCCHHHCCHHHHHHHHHHHH
Q ss_conf             45443123440265446543445410123203555556177548765---------444332001032024445577777
Q gi|254780497|r  158 FGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPS---------TSRTVGCIRMEGKAVFKYAVEKAV  228 (324)
Q Consensus       158 fGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~g~~~~~~~~~~~~  228 (324)
                      |||||+|+||++.+..      .+++.+++.+++.....+..++++.         .......++|+|+.+|+++.+.++
T Consensus       160 fGDGA~A~vl~~~~~~------~~il~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~  233 (329)
T PRK07204        160 FGDGAAAVVITKGDHS------SSIIASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLM  233 (329)
T ss_pred             ECCCCEEEEEECCCCC------CCEEEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHH
T ss_conf             1465148999505888------8447799765479704411136985478632333346673176057999999986269


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEE
Q ss_conf             77888898740010001210244444158999999719787673365865193301269999999998068899989999
Q gi|254780497|r  229 ELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLL  308 (324)
Q Consensus       229 ~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll  308 (324)
                      +.++++|+++|++++|||+|++||+|+++++.+.++||+|+||++.++++||||+|+|+|++|+++++++++++||+|++
T Consensus       234 ~~i~~~L~~~gl~~~DId~~i~HQ~n~~~~~~i~~~lgip~ek~~~~~~~~GNt~sasipi~L~~~~~~g~i~~Gd~vll  313 (329)
T PRK07204        234 KFIDKLLMDTGYSLADIDLIVPHQASGPAMRLIRKKLGVDEERFMTIFEDYGNMISASIPVALFEAIKQKKVQRGNKILL  313 (329)
T ss_pred             HHHHHHHHHCCCCHHHCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf             99999998719997889989981488899999999809697762103631180898889999999998499999699999


Q ss_pred             EEECCCCCEEEEEEEC
Q ss_conf             9971450145687869
Q gi|254780497|r  309 EAMGGGFTSGTVLLRW  324 (324)
Q Consensus       309 ~~~G~G~s~~a~llrw  324 (324)
                      ++||+|++||++++||
T Consensus       314 ~~~GaG~s~ga~l~~~  329 (329)
T PRK07204        314 LGTSAGLSIGGILLEY  329 (329)
T ss_pred             EEEEHHHHHHHEEEEC
T ss_conf             9988674150203769


No 7  
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00  E-value=0  Score=538.56  Aligned_cols=315  Identities=42%  Similarity=0.767  Sum_probs=291.9

Q ss_pred             EEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
Q ss_conf             69999999649841178899988099987811024751889828988999999999999997402123544336650122
Q gi|254780497|r    4 STVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATST   83 (324)
Q Consensus         4 ~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~   83 (324)
                      |+|+|+|+|||+++|+|+||+++++.+++||.++|||++||+++++|+++|||++|+++||+++|++|+|||+||++|++
T Consensus         1 v~I~g~g~ylP~~~v~n~e~~~~~~~~~~~i~~~tGI~~R~~~~~~e~~sdma~~Aa~~aL~~ag~~~~dIDllI~~t~t   80 (327)
T CHL00203          1 VHILSTGSSVPNFSIENQQFSQIVETSDEWISTRTGIKKRRLAGSSTSLTKLAAEAANKALHKAGWSAKDIDLIILATST   80 (327)
T ss_pred             CEEEEEEEECCCCEECHHHHHHHCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCC
T ss_conf             97999999789917849999987299868885457940797789999999999999999997549997898889995004


Q ss_pred             CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             33458985310011220268644442101220034678889989641556531676302243222456632323454431
Q gi|254780497|r   84 PDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGDGAG  163 (324)
Q Consensus        84 ~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGDGAa  163 (324)
                      |+++. ++|++|+++||++++.+|||+++|+||++||++|..+|++|.++++|||++|.+|+.+|++++.++++|||||+
T Consensus        81 pd~~~-~~a~~v~~~LG~~~~~afDv~~aC~g~~~al~~A~~~i~sg~~~~~LvV~~E~~S~~~~~~~~~~~~~fGDgA~  159 (327)
T CHL00203         81 PDDLF-GSASQLQAEIGATQAVAFDITAACSGFIFALVTAGQFIQSGSYRNILIIGADTLSRWIDWSDRRTCILFGDGAG  159 (327)
T ss_pred             CCCCC-CHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHCCCCCE
T ss_conf             67678-76999999858998637655200447999999999998569845147851432357656464545311378524


Q ss_pred             EEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCC----------CCCCCCHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf             234402654465434454101232035555561775487654----------4433200103202444557777777888
Q gi|254780497|r  164 ALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPST----------SRTVGCIRMEGKAVFKYAVEKAVELIEK  233 (324)
Q Consensus       164 A~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~g~~~~~~~~~~~~~~i~~  233 (324)
                      |++|++.+...     .++++..+.+++.+++.+.....+..          ......++|+|+++|+++++.+++.+++
T Consensus       160 A~il~~~~~~~-----~~~l~~~~~tdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~  234 (327)
T CHL00203        160 AVAIGECPTEE-----NSILGFKLCTDGSLNSHLQLMNKPDNMQLFNQTKYPMGGFNSISMNGKEVYKFAVFQVPAVIQE  234 (327)
T ss_pred             EEEEEECCCCC-----CCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHH
T ss_conf             89874046777-----8447899986677776178724787766567665667885427875599999999999999999


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECC
Q ss_conf             89874001000121024444415899999971978767336586519330126999999999806889998999999714
Q gi|254780497|r  234 VFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGG  313 (324)
Q Consensus       234 ~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~  313 (324)
                      +|+++|++++|||+|++||+|+++++.++++|++|+||++.++++||||+|+|+|++|+++++++++++||+|+|++||+
T Consensus       235 ~l~~~g~~~~did~~v~HQ~~~~~~~~i~~~lgl~~~k~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~g~G~  314 (327)
T CHL00203        235 CLNALNISIDEVDWLLLHQANQRILEAVADRLSIPHSKMITNLEHYGNTSAASIPLALDEAIKDNKIQPGQIIVLSGFGA  314 (327)
T ss_pred             HHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEH
T ss_conf             99876998111887998868899999999981979788665476449668889999999999849999989999999855


Q ss_pred             CCCEEEEEEEC
Q ss_conf             50145687869
Q gi|254780497|r  314 GFTSGTVLLRW  324 (324)
Q Consensus       314 G~s~~a~llrw  324 (324)
                      |++|+++++||
T Consensus       315 G~s~g~~~~~w  325 (327)
T CHL00203        315 GLTWGAIVLKW  325 (327)
T ss_pred             HHHHEEEEEEE
T ss_conf             72026899997


No 8  
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00  E-value=0  Score=535.12  Aligned_cols=317  Identities=36%  Similarity=0.592  Sum_probs=295.4

Q ss_pred             CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf             92269999999649841178899988099987811024751889828988999999999999997402123544336650
Q gi|254780497|r    1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVA   80 (324)
Q Consensus         1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~   80 (324)
                      |-+++|.|+|.|||+++|+|+|++++++.+++||+++|||++||++.++|+++|||++|+++||++++++|+|||+||++
T Consensus         2 ~~~~rI~g~G~ylP~~~v~n~el~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~ma~~Aa~~aL~~agi~~~dIdllI~~   81 (327)
T PRK05963          2 VCSSRIAGFGHAVPDRRVENAEIEAQLGLETGWIERRTGIRCRRWAMPDETLSHLAASAADMALADAGIERSDIALTLLA   81 (327)
T ss_pred             CCCCEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEE
T ss_conf             54677999999679937839999988299979977536933799889999999999999999999759898998799998


Q ss_pred             CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf             12233458985310011220268644442101220034678889989641556531676302243222456632323454
Q gi|254780497|r   81 TSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGD  160 (324)
Q Consensus        81 s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGD  160 (324)
                      |++||+++|++|++||++||++++.+|||+++|+||+.||++|..+++++. +++|||++|.+|+.+|+.|+.++++|||
T Consensus        82 t~t~d~~~P~~A~~v~~~LGl~~~~~fDi~~aC~g~~~al~~A~~~i~~~~-~~vLvv~~e~~S~~~~~~d~~~~~lfgD  160 (327)
T PRK05963         82 TSTPDHLLPPTAPLLAHWLGLQNSGAADLAGACTGFLYALVLADGFVRAQG-KPVLVVAANILSRRINMAERASAVLFAD  160 (327)
T ss_pred             EECCCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCC-CEEEEEEEHHHCCCCCCHHHHHHHHCCC
T ss_conf             607999897099999998577861143597668999999999999997348-6379964102103588012334323047


Q ss_pred             CCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCC--------CCCCHHHCCHHHHHHHHHHHHHHHH
Q ss_conf             43123440265446543445410123203555556177548765444--------3320010320244455777777788
Q gi|254780497|r  161 GAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSR--------TVGCIRMEGKAVFKYAVEKAVELIE  232 (324)
Q Consensus       161 GAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~~~~~~~~i~  232 (324)
                      ||+|+||++.+...     .+++...+.+|+.+++.+.++.++...+        ......++|+.+|+..++.+++.++
T Consensus       161 gA~A~vl~~~~~~~-----~g~l~~~~~td~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~  235 (327)
T PRK05963        161 AAGAVVLAPSAKAN-----SGVLGSQLISDGSHYDLIQIPAGGSARPYAPERDASEFLMTMQDGRAVFTEAVRMMTGASQ  235 (327)
T ss_pred             CCCEEEEECCCCCC-----CCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHH
T ss_conf             00068984157888-----7446689864378766388557986788887666665524751749999999985299999


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC
Q ss_conf             88987400100012102444441589999997197876733658651933012699999999980688999899999971
Q gi|254780497|r  233 KVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMG  312 (324)
Q Consensus       233 ~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G  312 (324)
                      ++|+++|++++|||+|++||+|+++++.+.++||+|+||++.++++||||+|+|+|++|+++++++++++||+|+|++||
T Consensus       236 ~~L~~~gl~~~dId~~v~HQ~n~~~~~~v~~~lgl~~ek~~~~~~~~GNt~sAsipiaL~~a~~~g~l~~Gd~vll~g~G  315 (327)
T PRK05963        236 NVLASAAMLPQDIDRFFPHQANARIVDKVCETLGIPRAKAASTIETYGNSSAATIPLSLSLANLEQPLREGERLLFAAAG  315 (327)
T ss_pred             HHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEE
T ss_conf             99998499822288899867998999999998297978703027513924888999999999982999997999999986


Q ss_pred             CCCCEEEEEEE
Q ss_conf             45014568786
Q gi|254780497|r  313 GGFTSGTVLLR  323 (324)
Q Consensus       313 ~G~s~~a~llr  323 (324)
                      +||+||++++|
T Consensus       316 ~G~s~g~~~~~  326 (327)
T PRK05963        316 AGMTGGAVVMQ  326 (327)
T ss_pred             HHHHHHHHEEE
T ss_conf             68635451265


No 9  
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00  E-value=0  Score=530.60  Aligned_cols=311  Identities=27%  Similarity=0.462  Sum_probs=280.0

Q ss_pred             CCEEEEEEEEEECCCCEECHHHHHHHHCCCHH----HHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCE
Q ss_conf             92269999999649841178899988099987----81102475188982898899999999999999740212354433
Q gi|254780497|r    1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDG----WIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDL   76 (324)
Q Consensus         1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~----~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~   76 (324)
                      |.|++|.|+|.|+|+++|+|+|+.+....+++    |+.+++||++||+++++|+++|||++|+++||++++++|+|||+
T Consensus         5 ~~~akI~G~g~~vP~~~v~n~d~~~~~~~~d~~~~~~~~~~tGI~~R~~a~~~~~~sdla~~AA~~AL~~a~i~~~dID~   84 (353)
T PRK12880          5 FDKAKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKKVIGLNTRYICDENTCVSDLGKHAANTLLQGLNIDKNSLDA   84 (353)
T ss_pred             CCCCEEEEEEEECCCCEECCHHHHHHHCCCCHHHHEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCE
T ss_conf             04408999999779976414798876538746776334245584547787999869999999999999975999889999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf             66501223345898531001122026-86444421012200346788899896415565316763022432224566323
Q gi|254780497|r   77 IIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTC  155 (324)
Q Consensus        77 ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~  155 (324)
                      ||++|++|||.+|++|+.||++||++ ++.+|||+.+|+||++||.+|..||++|. +++|||++|.+|+.+||+||.++
T Consensus        85 II~aT~tpD~~~PstA~~vq~~LGl~~~~~AfDI~~aCsGfvyaL~~A~~~I~sg~-~kvLlV~~e~~S~~id~~dr~t~  163 (353)
T PRK12880         85 LIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGL-GKILLICGDTLSKFIHPKNMNLA  163 (353)
T ss_pred             EEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEECHHHCCCCCHHHCCEE
T ss_conf             99973788908884789999980999885088745443469999999999998198-74899922675367782205510


Q ss_pred             CCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCC-----------------CCCCHHHCCHH
Q ss_conf             2345443123440265446543445410123203555556177548765444-----------------33200103202
Q gi|254780497|r  156 VLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSR-----------------TVGCIRMEGKA  218 (324)
Q Consensus       156 ~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~g~~  218 (324)
                      ++|||||+|+||++.+...      .+  ..+.+|+++++.+.++.++...+                 ....++|+|++
T Consensus       164 ~LFGDgAgA~vl~~~~~~~------~~--~~l~sdG~~~d~l~i~~gg~~~p~~~~~~~~~~~~~~~~~~~~~l~MdG~~  235 (353)
T PRK12880        164 PIFGDGVSATLIEKTDFNE------AF--FELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGAN  235 (353)
T ss_pred             EEECCCCEEEEEECCCCCC------CE--EEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHH
T ss_conf             3205774368873046786------42--898048888773784688655877555577532244334555533436589


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH-HHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf             44455777777788889874001000121024444415899999971978767336-58651933012699999999980
Q gi|254780497|r  219 VFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIV-TVDIHGNTSAASIPLALAVAVKE  297 (324)
Q Consensus       219 ~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~-~~~~~Gn~~sas~~~~L~~~~~~  297 (324)
                      +|+++++.+++.++++|+++|++++|||+|+|||+|.++++.++++||+|+||++. ++++||||+|||+|++|+++.+.
T Consensus       236 Vf~~av~~vp~~i~~~L~~agl~~~DId~~v~HQAN~riie~i~k~Lgl~~ek~~~~~~~~yGNTssASIPiaL~e~~~~  315 (353)
T PRK12880        236 IFNMALECEPKSFKEILEFSKVDEKDIAFHLFHQSNAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLCELDTP  315 (353)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
T ss_conf             99999999999999999983999788656865468899999999980989787030055533958999999999999874


Q ss_pred             CCCCCCCEEEEEEECCCCCEEEEEEEC
Q ss_conf             688999899999971450145687869
Q gi|254780497|r  298 GRVKKGDCLLLEAMGGGFTSGTVLLRW  324 (324)
Q Consensus       298 g~l~~Gd~vll~~~G~G~s~~a~llrw  324 (324)
                      +++    +++|++||+|++||++++||
T Consensus       316 ~~~----k~~L~gFGaGltwg~~ll~~  338 (353)
T PRK12880        316 KEF----KASLSAFGAGLSWGSAVLNF  338 (353)
T ss_pred             CCC----EEEEEEEEHHHHHEEEEEEE
T ss_conf             998----44699983574123888998


No 10 
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00  E-value=0  Score=523.23  Aligned_cols=314  Identities=52%  Similarity=0.821  Sum_probs=297.2

Q ss_pred             EEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf             26999999964984117889998809998781102475188982898899999999999999740212354433665012
Q gi|254780497|r    3 RSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATS   82 (324)
Q Consensus         3 ~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~   82 (324)
                      +++|.|+|+|+|+++|+|+|++++++.++++|++++||++||+++++|+++|||++|+++||++++++|+|||+||++|+
T Consensus         1 ~~~I~~~g~y~P~~~v~n~~~~~~~g~~~~~i~~~~Gi~~R~~a~~~e~~~~ma~~Aa~~aL~~ag~~~~dIdlli~~s~   80 (320)
T cd00830           1 NARILGIGSYLPERVVTNDELEKRLDTSDEWIRTRTGIRERRIADPGETTSDLAVEAAKKALEDAGIDADDIDLIIVATS   80 (320)
T ss_pred             CCEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
T ss_conf             97899999977993784999998869898999870297489988999999999999999999866989567888999415


Q ss_pred             CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             23345898531001122026864444210122003467888998964155653167630224322245663232345443
Q gi|254780497|r   83 TPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGDGA  162 (324)
Q Consensus        83 ~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGDGA  162 (324)
                      +||+..|++|++|+++||++++.+|||+++|+|++.||++|..++++|+.+++|||++|.+|+.+|+.++.++++|||||
T Consensus        81 ~~~~~~P~~a~~v~~~LGl~~~~~fdi~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~e~~s~~~~~~~~~~~~lfGDga  160 (320)
T cd00830          81 TPDYLFPATACLVQARLGAKNAAAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRILDWTDRSTAVLFGDGA  160 (320)
T ss_pred             CCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHCCCCCCCCCCHHHCCCCCC
T ss_conf             68986883999999996889972251045511589999999999855987616998413422554546621111037863


Q ss_pred             CEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCC------CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             1234402654465434454101232035555561775487654------4433200103202444557777777888898
Q gi|254780497|r  163 GALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPST------SRTVGCIRMEGKAVFKYAVEKAVELIEKVFD  236 (324)
Q Consensus       163 aA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~  236 (324)
                      +|+||++.+..      .+++.+++.+++++++.+..+.+...      ......++++++++++++.+.+++.++++|+
T Consensus       161 aA~ll~~~~~~------~~i~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~  234 (320)
T cd00830         161 GAVVLEATEED------PGILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALE  234 (320)
T ss_pred             EEEEEEECCCC------CCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHH
T ss_conf             48999624888------842468999706886526845897667764333567617973289999887656999999999


Q ss_pred             HHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf             74001000121024444415899999971978767336586519330126999999999806889998999999714501
Q gi|254780497|r  237 STHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFT  316 (324)
Q Consensus       237 ~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s  316 (324)
                      ++|++++|||+|++||+|+++++.++++||+|+||++.++++|||++|+|+|++|++++++++++|||+|+|++||+|++
T Consensus       235 ~~g~~~~did~~v~Hq~~~~~~~~~~~~lgi~~~k~~~~~~~~GN~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s  314 (320)
T cd00830         235 KAGLTPDDIDWFVPHQANLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLT  314 (320)
T ss_pred             HCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHH
T ss_conf             85999101657997068789999999980969899675685107558768999999999749999859999999804532


Q ss_pred             EEEEEE
Q ss_conf             456878
Q gi|254780497|r  317 SGTVLL  322 (324)
Q Consensus       317 ~~a~ll  322 (324)
                      |+++++
T Consensus       315 ~g~~~l  320 (320)
T cd00830         315 WGAALL  320 (320)
T ss_pred             HHHHHC
T ss_conf             532029


No 11 
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00  E-value=0  Score=524.79  Aligned_cols=315  Identities=24%  Similarity=0.357  Sum_probs=278.6

Q ss_pred             EEEEEEEEECCCCEECHHHHHHHH-------CCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCE
Q ss_conf             699999996498411788999880-------9998781102475188982898899999999999999740212354433
Q gi|254780497|r    4 STVRGIGLSLPRRVLSNSDLESIV-------DTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDL   76 (324)
Q Consensus         4 ~~I~~~g~ylP~~~v~~~el~~~~-------~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~   76 (324)
                      |+|+|+|+|||+++|+|+|+++++       +.+.+||+++|||++||+++++|+++|||++|+++||+++|++|+|||+
T Consensus         1 v~I~~~g~ylP~~~vtn~el~~~~~~~~~~~~~~~~~i~~~tGI~~Rr~a~~~e~~sdma~~Aa~~AL~~agi~p~dIDl   80 (339)
T PRK09258          1 VFINSLAYELAPVVVTSSEIESRLAPLYQRLRIPMGQLEALTGIRERRWWPKGHQLSDGATEAARKALAEAGIDASDIGL   80 (339)
T ss_pred             CEEEEEEEECCCCCCCHHHHHHHHCCCHHHHCCCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCE
T ss_conf             98989998779961748999977533045425871132334673035367999988999999999999975999899999


Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC-----
Q ss_conf             66501223345898531001122026-864444210122003467888998964155653167630224322245-----
Q gi|254780497|r   77 IIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWS-----  150 (324)
Q Consensus        77 ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~-----  150 (324)
                      ||++|++|||++|++|++||++||++ ++.+|||+.+|+||++||++|.++|++|.++++|||++|..|+.+|+.     
T Consensus        81 lI~at~tpd~~~P~tA~~v~~~LGl~~~~~afDi~~aCsGf~~aL~~A~~~i~sg~~~~~LvV~aE~~s~~~d~~~~~~~  160 (339)
T PRK09258         81 LINTSVCRDQLEPATACRVHAELGLSKDCAIFDISNACLGFLNGMLDAANMIELGQIDYGLVVSGESARDIVEATIARML  160 (339)
T ss_pred             EEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCC
T ss_conf             99905114853781899999984799874786510431679999999999997699988999975412100244432102


Q ss_pred             -----------CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHH
Q ss_conf             -----------663232345443123440265446543445410123203555556177548765444332001032024
Q gi|254780497|r  151 -----------DRSTCVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAV  219 (324)
Q Consensus       151 -----------d~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  219 (324)
                                 +....++|||||+|++|++.+.....   ..+......+++.+.+.+...   ........+++|++.+
T Consensus       161 ~~~~~~~~~f~~~~a~~~~GdGA~A~vl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~dg~~~  234 (339)
T PRK09258        161 ADPTMTRQNFAQSLATLTLGSGAVAVVLTRGSLVPRA---HRLLGGVTRAATEHHQLCQGG---LDEAGHGLMRTDAVLL  234 (339)
T ss_pred             CCCCCHHHHCCCCCCCEECCCCEEEEEEECCCCCCCC---CEEECCCCCCCCCHHHCCCCC---CCCCCCCCEEECHHHH
T ss_conf             4666203330221110421662179999536778888---645145545772100102478---8878765565358999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
Q ss_conf             44557777777888898740010001210244444158999999719787673365865193301269999999998068
Q gi|254780497|r  220 FKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEGR  299 (324)
Q Consensus       220 ~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~  299 (324)
                      |++.++.+++.++++|+++|++++|||+|++||+|.++++.+.++||+|+||++.++++||||+|||+|++|++++++|+
T Consensus       235 ~~~~~~~~~~~~~~~L~~~gl~~~dId~~v~HQan~~~~~~i~~~Lgi~~ek~~~~~~~~GNT~sASiPlaL~~a~~~g~  314 (339)
T PRK09258        235 LKEGVELAVDTWEAFLQQLGWSVEQVDKVVCHQVGAAHTRAVLKALGIDPEKVFPTFPLLGNMGPVSLPITLAMAAEQGF  314 (339)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCHHHHHCHHHHHCCHHHHHHHHHHHHHHHCCC
T ss_conf             99999999999999999839998998899862576999999999819687771031864586898999999999998299


Q ss_pred             CCCCCEEEEEEECCCCCEEEEEEEC
Q ss_conf             8999899999971450145687869
Q gi|254780497|r  300 VKKGDCLLLEAMGGGFTSGTVLLRW  324 (324)
Q Consensus       300 l~~Gd~vll~~~G~G~s~~a~llrw  324 (324)
                      +++||+|+|++||+|++|+++++||
T Consensus       315 ik~Gd~vll~~~GaGl~~~~~~~~w  339 (339)
T PRK09258        315 LKKGDRVALLGIGSGLNCSMLGIKW  339 (339)
T ss_pred             CCCCCEEEEEEEEHHHHHHHHEEEC
T ss_conf             9997999999884787655673769


No 12 
>PRK06840 hypothetical protein; Validated
Probab=100.00  E-value=0  Score=519.55  Aligned_cols=316  Identities=22%  Similarity=0.409  Sum_probs=285.5

Q ss_pred             CEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEE-E
Q ss_conf             226999999964984117889998809998781102475188982898899999999999999740212354433665-0
Q gi|254780497|r    2 IRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIV-A   80 (324)
Q Consensus         2 ~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~-~   80 (324)
                      ||++|.|+|.|+|+++|+|+|+++++++++|||.++|||++||+++++|+++|||++|+++||+++|++|+|||+||+ +
T Consensus         3 ~~v~I~~~G~ylP~~~v~n~e~~~~~~~~~e~i~~rtGI~~Rr~a~~~e~~~dma~~Aa~~aL~~ag~~~~dIdliI~~~   82 (337)
T PRK06840          3 MNVGIVSTGVYLPKDVMTAEEIAKKTGIPEEVIIEKFGILEKPIPGPEDHTSDMAIAAAKPALKQAGIDPEAIDLVIYIG   82 (337)
T ss_pred             CCEEEEEEEEECCCCEECHHHHHHHCCCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEE
T ss_conf             51099999997899736699999873998799854658616857899998999999999999997498967887899993


Q ss_pred             CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-CCCCCEEEEECCCCCCCCCCCCCCCCCC-
Q ss_conf             12233458985310011220268644442101220034678889989641-5565316763022432224566323234-
Q gi|254780497|r   81 TSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSG-VVRRVMVIGSDTFSRIVDWSDRSTCVLF-  158 (324)
Q Consensus        81 s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g-~~~~~Lvv~~e~~S~~~d~~d~~~~~lf-  158 (324)
                      |.++|++.|++|++||++||++++.+|||+++|+||++||++|.+++.++ .++++|||++|..|+.+||+++.++++| 
T Consensus        83 t~~~d~~~ps~A~~vq~~LG~~~a~afDi~~aC~gf~~aL~~A~~~l~a~~~~~~vLvv~~e~~s~~i~~~~~~~~~~f~  162 (337)
T PRK06840         83 EEHKDYPVWTAAPKIQHEIGAKNAWAFDIMARCGTFPVALKVAKDLMLADPNINNVLLVGGYRNSDLVDYDNPRSRFMFN  162 (337)
T ss_pred             CCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEE
T ss_conf             68989788419999999858999607871332017999999999998716553147860143246555668988516997


Q ss_pred             -CCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCC--------CCCCHHHCCHHH-----HHHHH
Q ss_conf             -5443123440265446543445410123203555556177548765444--------332001032024-----44557
Q gi|254780497|r  159 -GDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSR--------TVGCIRMEGKAV-----FKYAV  224 (324)
Q Consensus       159 -GDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~g~~~-----~~~~~  224 (324)
                       ||||+|++|++.+..      .+++++.+.+|+++++.+..+.++...+        ....+++.+.+.     .....
T Consensus       163 ~GDga~A~ll~~~~~~------~~il~~~~~tdg~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  236 (337)
T PRK06840        163 LGAGGSAALLKKNYGK------NRVLGSAIITDGSFSEDVRVPAGGTKQPASYETVDNRQHYLDVLDPESMKERLDPVSI  236 (337)
T ss_pred             ECCCCEEEEEECCCCC------CCEEEEEECCCCCCHHCEEEECCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHH
T ss_conf             0588347998416888------7057666212575312168713875688874453454215863103888877688999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             77777788889874001000121024444415899999971978767336586519330126999999999806889998
Q gi|254780497|r  225 EKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKKGD  304 (324)
Q Consensus       225 ~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd  304 (324)
                      +.+.++++++|+++|++++|||+|++||+|+++++.+.++||+|+||+. ++++||||+++|+|++|++++++|++++||
T Consensus       237 ~~~~~~i~~~L~~~gl~~~DId~~~~hq~~~~~~~~~~~~lgi~~~k~~-~~~~~GNt~sasiplaL~~a~~~g~l~~Gd  315 (337)
T PRK06840        237 PNFYKVIREALRKSGYTPKDIDYLAILHMKRSAHIAVLEGLGLTEEQTI-YLEEYGHMGQIDQILSLHLALEQGKLKDGD  315 (337)
T ss_pred             HHHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHHCCCHHHEE-ECCCCCCHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             8899999999998499957868888853379999999998299754348-602677317778999999999809999959


Q ss_pred             EEEEEEECCCCCEEEEEEEC
Q ss_conf             99999971450145687869
Q gi|254780497|r  305 CLLLEAMGGGFTSGTVLLRW  324 (324)
Q Consensus       305 ~vll~~~G~G~s~~a~llrw  324 (324)
                      +|+|++||+|++||++++||
T Consensus       316 ~vll~g~G~G~s~g~~v~~w  335 (337)
T PRK06840        316 LVVLVSAGTGYTWAATVIRW  335 (337)
T ss_pred             EEEEEEEEHHHHHEEEEEEE
T ss_conf             99999999452125899997


No 13 
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00  E-value=0  Score=516.79  Aligned_cols=320  Identities=25%  Similarity=0.343  Sum_probs=272.0

Q ss_pred             CEEEEEEEEEECCCCEECHHHHHHHH-------CCCHHHHHHCCCCCEEEEE-----CCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf             22699999996498411788999880-------9998781102475188982-----89889999999999999974021
Q gi|254780497|r    2 IRSTVRGIGLSLPRRVLSNSDLESIV-------DTSDGWIKRRVGISRRHIA-----GKDETTASLGEAAARDALHHAEM   69 (324)
Q Consensus         2 ~~~~I~~~g~ylP~~~v~~~el~~~~-------~~~~~~i~~~~GI~~R~~~-----~~~e~~~~la~~Aa~~al~~a~~   69 (324)
                      |||+|.|+|.|||+++|+|+||++++       +++++||.++|||++|||+     .+.|+.+|||++|+++||+++|+
T Consensus         1 m~v~I~g~G~ylP~~vvtN~el~~~~~~~~~~~~~~~~~I~~rtGI~~Rr~a~~~~~~~~et~sdma~~Aa~~AL~~Agi   80 (378)
T PRK06816          1 MNVYITSTGAFLPGEPVDNDEMEAYLGLINGRPSRLRRIILRNNGIKTRHYAIDPTGETTHSNAQMAAHAIRDLLDDAGF   80 (378)
T ss_pred             CCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf             96399999997899825589999986415788774888977545821378740788887667899999999999997599


Q ss_pred             CCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
Q ss_conf             23544336650122334589853100112202686444421012200346788899896415565316763022432224
Q gi|254780497|r   70 SVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDW  149 (324)
Q Consensus        70 ~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~  149 (324)
                      +|+|||+||++|++||++.|++|+.||++||++++.+||++++|+||++||++|..+|++|.++++|||++|..|+.+++
T Consensus        81 ~~~dIDliI~aT~tpd~~~P~tA~~Vq~~LGl~~~~~fDi~~aCsgf~~aL~~A~~~I~sG~~k~vLVV~aE~~S~~l~~  160 (378)
T PRK06816         81 GLEDVELLACGTSQGDQLMPGHAVMVHGELGNPPCEVVSFHGVCAAGMMALKYAYLSVKAGESSNAVATASELASRLFRA  160 (378)
T ss_pred             CHHHCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHCC
T ss_conf             98999999996686898785489999998189985403211012378999999999997489887999934401121034


Q ss_pred             C------------CCCCCC---------CCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCC-----
Q ss_conf             5------------663232---------34544312344026544654344541012320355555617754876-----
Q gi|254780497|r  150 S------------DRSTCV---------LFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGP-----  203 (324)
Q Consensus       150 ~------------d~~~~~---------lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  203 (324)
                      +            |+.++.         +|||||+|+||++.+........  +...++.+++..++.+...++.     
T Consensus       161 ~~~~~~~~~~~~~d~~~~~~f~~~fl~~lfGDGAgA~vl~~~~~~~g~~~~--i~~~~~~s~~~~~~~~~~~G~~~~~~~  238 (378)
T PRK06816        161 SRYEAEEERVEELEEGPEIAFEKDFLRWMLSDGAGAVLLENKPRPGGLSLR--IDWIDLFSFADEFPVCMYAGADKNEDG  238 (378)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEE--EEEECCCCCCCCCCCCEECCCCCCCCC
T ss_conf             322321122220124410033200135555666636997643888874345--431014554555663021476667787


Q ss_pred             ------------CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHC-----C
Q ss_conf             ------------54443320010320244455777777788889874001000121024444415899999971-----9
Q gi|254780497|r  204 ------------STSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKM-----K  266 (324)
Q Consensus       204 ------------~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~l-----g  266 (324)
                                  ........++|+++.+++.+...+++.++++|+++|++++|||+|+|||+|.++++.+.+.|     +
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~L~~~gl~~~dId~~vpHQAn~ri~~~v~~~l~~~g~~  318 (378)
T PRK06816        239 ELKGWSDYSPAEAEAAGALALKQDVRLLNEVIVVWGVDPYLELVDKRRLDPDAIDHFLPHYSSEYFREKIVELLAKAGLM  318 (378)
T ss_pred             CCCCCCCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEECCCCHHHHHHHHHHHHHHCCCC
T ss_conf             65774447877775335401112589999999999999999999984999899888812610599999999998753589


Q ss_pred             CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC-CCEEEEEEE
Q ss_conf             787673365865193301269999999998068899989999997145-014568786
Q gi|254780497|r  267 IPFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGG-FTSGTVLLR  323 (324)
Q Consensus       267 l~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G-~s~~a~llr  323 (324)
                      +|+||++.++++||||+|||+|++|++++++|++++||+|+|+++|+| |+||+++++
T Consensus       319 ip~ek~~~~v~~~GNT~sASiPiaL~~a~~~g~ik~Gd~vll~~~~sg~~~~g~~ll~  376 (378)
T PRK06816        319 IPEEKWFTNLATVGNTGSASIFIMLDELFRSGRLKPGQTILCFVPESGRFSAAFMLLT  376 (378)
T ss_pred             CCHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHEEEEEE
T ss_conf             9866616014232707999999999999984999999999999624767615469999


No 14 
>PRK04262 hypothetical protein; Provisional
Probab=100.00  E-value=0  Score=453.41  Aligned_cols=305  Identities=23%  Similarity=0.303  Sum_probs=251.5

Q ss_pred             CEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf             22699999996498411788999880999878110247518898289889999999999999974021235443366501
Q gi|254780497|r    2 IRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVAT   81 (324)
Q Consensus         2 ~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s   81 (324)
                      |+++|.|+|.|+|+++|+|+||++.++.+++||.++|||++||+++++|++++||++|+++||++++++|++||+||++|
T Consensus         1 M~vgI~g~G~YlP~~~v~n~el~~~~~~~~ewI~~rtGI~~R~va~~dE~t~~lA~~AA~~aL~~agi~~~dIdlIi~aT   80 (346)
T PRK04262          1 MMVGIVGYGAYIPRYRIKVEEIARVWGDDPEAIKKGLGVEEKSVPGPDEDTATIAVEAARNALKRAGIDPKEIGAVYVGS   80 (346)
T ss_pred             CCCEEEEEEEECCCEEECHHHHHHHHCCCHHHHEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEE
T ss_conf             92179899995899688499999885999647313668507877899999999999999999987599977889899964


Q ss_pred             CCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf             223345898531001122026-8644442101220034678889989641556531676302243222456632323454
Q gi|254780497|r   82 STPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGD  160 (324)
Q Consensus        82 ~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGD  160 (324)
                      +|||+..|++|+.||++||++ ++.+||++.+|+||++||.+|.+||++|.++++|||++|..+.  ++.+.. -+..||
T Consensus        81 ~Tpd~~~pstA~~vq~~LGl~~~~~afDi~aaCsGf~~aL~~A~~~I~sg~~~~~LVV~aD~~~~--~~~~~~-e~~~Ga  157 (346)
T PRK04262         81 ESHPYAVKPTATIVAEALGATPDLTAADLEFACKAGTAALQAAMGLVKSGMIKYALAIGADTAQG--APGDAL-EYTAAA  157 (346)
T ss_pred             CCCCCCCCCHHHHHHHHHCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC--CCCCEE-EECCCC
T ss_conf             78886676506899998389988059861022114999999999999739997699983133347--874056-666888


Q ss_pred             CCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             43123440265446543445410123203555556177548765444332001032024445577777778888987400
Q gi|254780497|r  161 GAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHL  240 (324)
Q Consensus       161 GAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl  240 (324)
                      ||+|++++.++......      .....+. ...+.++.++.+ ....  ..++.+..   .+.+.+++.++++|+++|+
T Consensus       158 Ga~A~~~g~~~~~~~~~------~~~~~~~-~~~d~~r~~~~~-~~~~--~~~~~~~~---~~~~~~~~~~~~~l~~~g~  224 (346)
T PRK04262        158 GGAAFIIGAEEVIAEIE------ATYSYVT-DTPDFWRREGEP-YPRH--GERFTGEP---AYFKHIISAAKGLMEKLGT  224 (346)
T ss_pred             CEEEEEECCCCCCEEEC------CCCCCCC-CCCCCCCCCCCC-CCCC--CCCEECCE---EHHHHHHHHHHHHHHHCCC
T ss_conf             76999987799733745------6334457-874220569982-4230--77162523---2799999999999998299


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH--HHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEE
Q ss_conf             100012102444441589999997197876733658--651933012699999999980688999899999971450145
Q gi|254780497|r  241 TIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTV--DIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFTSG  318 (324)
Q Consensus       241 ~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~--~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~  318 (324)
                      +++|||||+|||+|.++++.+.++||+|+||++.++  ++||||++||+|++|.++++++  ++||+|+|++||+|....
T Consensus       225 ~~~did~~v~HQAn~rii~~~~k~Lgi~~ekv~~nl~~~~~GNTssASiplaL~~~l~~~--k~Gd~Ill~~fG~G~~~~  302 (346)
T PRK04262        225 KPSDYDYAVFHQPNGKFPLRAAKMLGFTKEQVKPGLLTPYIGNTYSASALLGLAAVLDVA--KPGDRILVVSFGSGAGSD  302 (346)
T ss_pred             CHHHCCEEECCCCCHHHHHHHHHHCCCCHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHCC--CCCCEEEEEEECCCCCEE
T ss_conf             978858895167657899999998299989922342177647750336999999998438--998999999856973136


Q ss_pred             EEEEEC
Q ss_conf             687869
Q gi|254780497|r  319 TVLLRW  324 (324)
Q Consensus       319 a~llrw  324 (324)
                      +..+|+
T Consensus       303 ~~~~~v  308 (346)
T PRK04262        303 AFSITV  308 (346)
T ss_pred             EEEEEE
T ss_conf             899998


No 15 
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00  E-value=0  Score=434.39  Aligned_cols=312  Identities=33%  Similarity=0.445  Sum_probs=265.7

Q ss_pred             EEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf             26999999964984117889998809998781102475188982898899999999999999740212354433665012
Q gi|254780497|r    3 RSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATS   82 (324)
Q Consensus         3 ~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~   82 (324)
                      +|+|.|+|+|+|+++|+|+|+++.++.+  ++++++||++||+++++|++.||+++|+++||++++++|+|||+||++|+
T Consensus         1 ~v~I~~~g~y~P~~~v~~~~~~~~~~~~--~~~~~~Gi~~r~~a~~~e~~~~ma~~Aa~~aL~~a~~~~~~Idlli~~s~   78 (324)
T cd00827           1 DVGIEAIGAYLPRYRVDNEELAEGLGVD--PGKYTTGIGQRHMAGDDEDVPTMAVEAARRALERAGIDPDDIGLLIVATE   78 (324)
T ss_pred             CCCEEEEEEECCCCEECHHHHHHHHCCH--HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECC
T ss_conf             9368799997899479599999884952--76502470389967999999999999999999984989889979999325


Q ss_pred             CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             23345898531001122026864444210122003467888998964155653167630224322245663232345443
Q gi|254780497|r   83 TPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGDGA  162 (324)
Q Consensus        83 ~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGDGA  162 (324)
                      +|++..|++|++|+++||++++.+||++++|+|++.||++|.+++++|+.+++|||++|.+|+..++.++ ..++|||||
T Consensus        79 ~~~~~~p~~a~~i~~~Lgl~~~~~~di~~~C~g~~~aL~~A~~~l~~g~~~~~LVv~~e~~s~~~~~~~~-~~~~~GDgA  157 (324)
T cd00827          79 SPIDKGKSAATYLAELLGLTNAEAFDLKQACYGGTAALQLAANLVESGPWRYALVVASDIASYLLDEGSA-LEPTLGDGA  157 (324)
T ss_pred             CCCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHCCCCCCCCC-CCCCCCCCC
T ss_conf             7786797499999998589997188601422047999999998875487651478740110124677987-664457722


Q ss_pred             CEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCC-----C--CCCHHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             123440265446543445410123203555556177548765444-----3--320010320244455777777788889
Q gi|254780497|r  163 GALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSR-----T--VGCIRMEGKAVFKYAVEKAVELIEKVF  235 (324)
Q Consensus       163 aA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~g~~~~~~~~~~~~~~i~~~L  235 (324)
                      +|+||++.+...    ..++...+..+++.+........+.....     .  .....+.++.+++...+.+.+.++++|
T Consensus       158 aA~ll~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  233 (324)
T cd00827         158 AAMLVSRNPGIL----AAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKAL  233 (324)
T ss_pred             EEEEEECCCCCC----CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             899982278655----5540367750156654444456788877754321002222444178999999999999999999


Q ss_pred             HHHHCCCCCCCCCCCCCCCH-HHHHHHHHHCCCCHHHH----HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEE
Q ss_conf             87400100012102444441-58999999719787673----36586519330126999999999806889998999999
Q gi|254780497|r  236 DSTHLTIENIDWFVPHQANW-RIINSIVDKMKIPFDKV----IVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEA  310 (324)
Q Consensus       236 ~~~gl~~~did~~~~Hq~~~-~~~~~~~~~lgl~~e~~----~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~  310 (324)
                      ++.+++ +|+++|++||+|. .+.+.+.++|+++.++.    +.++++|||++++|+|++|+++++++++++||+|++++
T Consensus       234 ~~~~~~-~~~~~~~~hq~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sasi~~~L~~~l~~g~l~~Gd~vll~~  312 (324)
T cd00827         234 DRAGLS-EDIDYFVPHQPNGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFS  312 (324)
T ss_pred             HHCCCC-HHHHHEEECCCCHHHHHHHHHHHCCCCHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
T ss_conf             984997-5441243257637899999999839965651351646516841448989999999999729999849999999


Q ss_pred             ECCCCCEEEEEE
Q ss_conf             714501456878
Q gi|254780497|r  311 MGGGFTSGTVLL  322 (324)
Q Consensus       311 ~G~G~s~~a~ll  322 (324)
                      +|+|++|+++++
T Consensus       313 ~G~G~s~~~~vl  324 (324)
T cd00827         313 YGSGFTAEAFVL  324 (324)
T ss_pred             ECHHHHHHHECC
T ss_conf             906831551119


No 16 
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00  E-value=0  Score=424.33  Aligned_cols=314  Identities=23%  Similarity=0.287  Sum_probs=252.5

Q ss_pred             EEEEEEEEEECCCCEECHHHHHHHHCCC------------HHHHHHCCCCCEEEEECCC---------------------
Q ss_conf             2699999996498411788999880999------------8781102475188982898---------------------
Q gi|254780497|r    3 RSTVRGIGLSLPRRVLSNSDLESIVDTS------------DGWIKRRVGISRRHIAGKD---------------------   49 (324)
Q Consensus         3 ~~~I~~~g~ylP~~~v~~~el~~~~~~~------------~~~i~~~~GI~~R~~~~~~---------------------   49 (324)
                      .++|.|+|+|+|+++++|+++.+.....            ..||.+++||++||++.++                     
T Consensus         1 ~A~I~gigt~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tgI~~R~~~~~~~~~~~~~~~~~~~~~~~r~~~   80 (361)
T cd00831           1 AATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERNDI   80 (361)
T ss_pred             CEEEEEEEEECCCEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCCCCCCCHHHHHHH
T ss_conf             91999988777992675999999998744333435678999999972698615555266122024565558887888777


Q ss_pred             --CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCC-CCCCCHHHHHHHHHH
Q ss_conf             --89999999999999974021235443366501223345898531001122026-86444421-012200346788899
Q gi|254780497|r   50 --ETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQ-AVCSGFVYAVTTADS  125 (324)
Q Consensus        50 --e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~-~~C~~~~~al~~A~~  125 (324)
                        |...+|+++|+++||+++|++|+|||+||++|++ ++..|+++++|+++||++ ++..||++ +||+||+.||++|.+
T Consensus        81 ~~~~~~~la~~Aa~~AL~~ag~~~~dId~lI~~Tst-~~~~Ps~a~~v~~~LGl~~~~~~~dl~~~gCsg~~~aL~~A~~  159 (361)
T cd00831          81 ALEEARELAEEAARGALDEAGLRPSDIDHLVVNTST-GNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKD  159 (361)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCC-CCCCCCHHHHHHHHHCCCCCHHEEECCCCCCHHHHHHHHHHHH
T ss_conf             998999999999999999819898999999998659-9998976999999738998700355646755689999999999


Q ss_pred             HHHHCCCCCCEEEEECCCCCCCCCCCCC----CCCCCCCCCCEEEEECCCCCCCCCCC-CCCEEEEEECCCCCCCCEEEC
Q ss_conf             8964155653167630224322245663----23234544312344026544654344-541012320355555617754
Q gi|254780497|r  126 YIRSGVVRRVMVIGSDTFSRIVDWSDRS----TCVLFGDGAGALILEGVEVKGSSMAD-TGILSTYLCSDGSYIDKLYVD  200 (324)
Q Consensus       126 li~~g~~~~~Lvv~~e~~S~~~d~~d~~----~~~lfGDGAaA~ll~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  200 (324)
                      ++++|+.++||||++|.+|++++++|+.    +..+|||||+|+||+..+........ ..+.+......+...+.+.+ 
T Consensus       160 ~i~~g~~~~vLVV~~E~~S~~~~~~d~~~~~v~~~LFGDGA~A~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  238 (361)
T cd00831         160 LLEANPGARVLVVSTELCSLWYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSEDAMGW-  238 (361)
T ss_pred             HHHHCCCCEEEEEEEEECCEECCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC-
T ss_conf             9982999769999612112020688757775542000477258998426766656665268837776124688876666-


Q ss_pred             CCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH--HCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHH---HH
Q ss_conf             87654443320010320244455777777788889874--00100012102444441589999997197876733---65
Q gi|254780497|r  201 GGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDST--HLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVI---VT  275 (324)
Q Consensus       201 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~--gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~---~~  275 (324)
                         ...+....+. -++.+++.+.+.+.+.+++++++.  ++...||++|++||+|+++++.+.++||++++++.   .+
T Consensus       239 ---~~~~~g~~~~-l~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~di~~~~~Hq~~~~Ii~~v~~~Lgl~~~~~~~s~~~  314 (361)
T cd00831         239 ---HLGEEGLTFV-LSRDVPRLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGGRAVLDAVEKALGLSPEDLEASRMV  314 (361)
T ss_pred             ---CCCCCCEEEE-ECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf             ---5057753785-063699999999999999999982589996772558878786899999999829896883257878


Q ss_pred             HHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEE
Q ss_conf             86519330126999999999806889998999999714501456878
Q gi|254780497|r  276 VDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFTSGTVLL  322 (324)
Q Consensus       276 ~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~a~ll  322 (324)
                      +++||||+|+++|+.|+++++++++++||+++|++||+||||+++||
T Consensus       315 l~~~GNtsSaSip~~L~~~~~~~~~~~Gd~vl~~afG~Glt~~~~v~  361 (361)
T cd00831         315 LRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCESAVW  361 (361)
T ss_pred             HHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHEEEEECC
T ss_conf             98638539889999999999739999999899999810405531209


No 17 
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=100.00  E-value=2.8e-45  Score=308.20  Aligned_cols=299  Identities=22%  Similarity=0.290  Sum_probs=248.2

Q ss_pred             CEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf             22699999996498411788999880999878110247518898289889999999999999974021235443366501
Q gi|254780497|r    2 IRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVAT   81 (324)
Q Consensus         2 ~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s   81 (324)
                      |+++|.++|.|+|..+|..+|+++.++.+++++.+-+|+++|.|++.+|+..+||++||+++|+|+++||++|+.|+++|
T Consensus         1 ~~iGI~~~g~y~p~~~i~~~ela~~~g~d~~k~~~gl~~~e~sv~~~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgT   80 (377)
T COG3425           1 MMIGIVGIGAYIPRYRIKLEELARAWGVDPEKIKKGLGVEEKSVPPWDEDAVTMAVEAARNALKRADIDPSKIGAVIVGS   80 (377)
T ss_pred             CCCCCCEEEEECCCEEEEHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEC
T ss_conf             95551238885662386099997632888377653004234467997420899999999998751388988966699953


Q ss_pred             CCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf             2233458985310011220268-644442101220034678889989641556531676302243222456632323454
Q gi|254780497|r   82 STPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGD  160 (324)
Q Consensus        82 ~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGD  160 (324)
                      .|+.+...+++.+|++.||+.+ +.++|+..+|-+++.||+.|.+++.+++.+++|||++|+......  + .--...|+
T Consensus        81 ES~~d~~K~~at~v~~~lg~~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~~~~--~-~~E~t~GA  157 (377)
T COG3425          81 ESGPDAVKPTATIVAEALGLNPSARAADVEFACYAGTAALQAAIGWVESGMISYGLVIGADTAQYAPG--D-ALEYTAGA  157 (377)
T ss_pred             CCCCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCC--C-CCCCCCCC
T ss_conf             77765444058999998389975120567878998899999999999728755417996311035888--6-56766778


Q ss_pred             CCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             43123440265446543445410123203555556177548765444332001032024445577777778888987400
Q gi|254780497|r  161 GAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHL  240 (324)
Q Consensus       161 GAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl  240 (324)
                      ||+|+|+++.+.......     ++...++  ....++.+.+....      ..+|+.....+.+.+...+++.+++.++
T Consensus       158 GavA~lIg~n~~~~a~~~-----~~~syt~--d~~DFwRp~~~~yp------~~dg~~s~~~Y~~~~~~a~~~~~~k~gl  224 (377)
T COG3425         158 GAVAFLIGKNPPIVAEFE-----GTGSYTT--DTPDFWRPDGQPYP------YVDGRFSEPAYFKHVENAAKGYMEKTGL  224 (377)
T ss_pred             CEEEEEEECCCCEEEEEC-----CCEEEEC--CCCCCCCCCCCCCC------CCCCEECHHHHHHHHHHHHHHHHHHHCC
T ss_conf             608999806987278724-----7567745--77761466898466------4076355899999999999999998389


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH---HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCE
Q ss_conf             1000121024444415899999971978767336---5865193301269999999998068899989999997145014
Q gi|254780497|r  241 TIENIDWFVPHQANWRIINSIVDKMKIPFDKVIV---TVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFTS  317 (324)
Q Consensus       241 ~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~---~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~  317 (324)
                      +++|+|++++|||+.+|-...++.|+.+.+++..   ..++.||++++|+++.|..+|+... .+||+|+++|||+|...
T Consensus       225 s~~dfdy~vfH~P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~Ld~a~-~~G~rIl~~SYGSGa~s  303 (377)
T COG3425         225 SPDDFDYIVFHQPNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSGAGS  303 (377)
T ss_pred             CHHHHCEEEECCCCCCHHHHHHHHHCCCHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCC-CCCCEEEEEEECCCCCE
T ss_conf             84550759831798724899999857347662843011665275111069999999985267-88887999960788525


No 18 
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=8.1e-43  Score=293.03  Aligned_cols=314  Identities=23%  Similarity=0.315  Sum_probs=242.0

Q ss_pred             EEEEEEEEECCCCEECHHHHHHHH----C-CCHHHH----HHCCCCCEEEEECCC-----------------CCHHHHHH
Q ss_conf             699999996498411788999880----9-998781----102475188982898-----------------89999999
Q gi|254780497|r    4 STVRGIGLSLPRRVLSNSDLESIV----D-TSDGWI----KRRVGISRRHIAGKD-----------------ETTASLGE   57 (324)
Q Consensus         4 ~~I~~~g~ylP~~~v~~~el~~~~----~-~~~~~i----~~~~GI~~R~~~~~~-----------------e~~~~la~   57 (324)
                      +.|.|+++++|++.+.+.|+...+    . ...+.|    .++.+|++|+...|.                 |.+.++++
T Consensus         2 a~i~sv~t~~Ppy~~~Qse~~d~f~~~~~~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~~l~v   81 (356)
T COG3424           2 AVIASVATALPPYRYNQSEITDSFAELPFQEGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAVPLGV   81 (356)
T ss_pred             CEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEECCCHHHCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             25400005799643566788999987315222678899986533625121226276641788756630349998799999


Q ss_pred             HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCC-CCCCC-CCCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf             999999974021235443366501223345898531001122026864-44421-0122003467888998964155653
Q gi|254780497|r   58 AAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGF-AFDMQ-AVCSGFVYAVTTADSYIRSGVVRRV  135 (324)
Q Consensus        58 ~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~-~~di~-~~C~~~~~al~~A~~li~~g~~~~~  135 (324)
                      +|+|+||+.+++.|+|||+|+++|+|+ ...|+.-.+|.++||+++.. -+-+. .||+++..+|..|++++++.+..++
T Consensus        82 ~a~r~aL~~~~l~pedId~vv~vtsTG-~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~~~v  160 (356)
T COG3424          82 DALRRALDGSPLRPEDIDAVVTVTSTG-LATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPDANV  160 (356)
T ss_pred             HHHHHHHCCCCCCHHHCCEEEEEEECC-CCCCCHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf             999988526999977886799995025-5478754998861399976405220032014211578999999750866508


Q ss_pred             EEEEECCCCCCCCCCCCC-----CCCCCCCCCCEEEEECCCCC-CCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCC
Q ss_conf             167630224322245663-----23234544312344026544-654344541012320355555617754876544433
Q gi|254780497|r  136 MVIGSDTFSRIVDWSDRS-----TCVLFGDGAGALILEGVEVK-GSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTV  209 (324)
Q Consensus       136 Lvv~~e~~S~~~d~~d~~-----~~~lfGDGAaA~ll~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (324)
                      ||||.|.||-..-+.|+.     ...+||||++|++++.+... ........++++...-.....+.+-|+.+....+  
T Consensus       161 lvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~StL~~dse~~Mgwdv~d~G~~--  238 (356)
T COG3424         161 LVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPDSEDIMGWDVGDQGLK--  238 (356)
T ss_pred             EEEEEEEEEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEECCCCEE--
T ss_conf             999946321554347887545133330048705899834643346678975000454546886210011530488479--


Q ss_pred             CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHH---HHHHHHHCCCHHHH
Q ss_conf             200103202444557777777888898740010001210244444158999999719787673---36586519330126
Q gi|254780497|r  210 GCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKV---IVTVDIHGNTSAAS  286 (324)
Q Consensus       210 ~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~---~~~~~~~Gn~~sas  286 (324)
                      -.+   .+.+...+-..+...+..+|+.++++.+||+.|+.|++++++++++.+.||+++++.   +..+.+|||++|++
T Consensus       239 ~vl---Srdlp~lIe~~l~~~V~~fL~~~~ls~~dI~~w~~HPGG~KVida~~~sLgls~e~l~~s~~~L~~~GNMSSat  315 (356)
T COG3424         239 VVL---SRDLPNLIESYLAPNVTTFLATHGLSIEDIEAWVVHPGGPKVIDAYEESLGLSPEALELSWDVLREYGNMSSAT  315 (356)
T ss_pred             EEE---CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHH
T ss_conf             997---57326899998525589999976876654111555799706999998761899889999999999827865210


Q ss_pred             HHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEEEC
Q ss_conf             99999999980688999899999971450145687869
Q gi|254780497|r  287 IPLALAVAVKEGRVKKGDCLLLEAMGGGFTSGTVLLRW  324 (324)
Q Consensus       287 ~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~a~llrw  324 (324)
                      +++.|.+.+++. -++|++++|.++|+||+...++++|
T Consensus       316 vLfVL~d~l~~~-~~~g~~Gl~~A~GPGf~sElvL~~w  352 (356)
T COG3424         316 VLFVLEDTLQKA-PKSGSRGLMFAMGPGFCSELVLLDW  352 (356)
T ss_pred             HHHHHHHHHHHC-CCCCCCEEEEECCCCCEEEEEEEEE
T ss_conf             299999999736-8877630345327863222445773


No 19 
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=100.00  E-value=8.5e-39  Score=267.37  Aligned_cols=239  Identities=26%  Similarity=0.297  Sum_probs=196.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             89889999999999999974021235443366501223345898531001122026864444210122003467888998
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSY  126 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~l  126 (324)
                      .++++++||+.+|+++||+++|++++|||.||++|+++++..|+.+++|+.+||+++.++|+++.+|+|++.||..|.++
T Consensus         2 ~~g~~~s~la~~Aa~~Al~dAGi~~~~i~~viv~t~t~~~~~p~~a~~v~~~lgl~~~p~~~v~~aCss~~~Al~~A~~~   81 (254)
T cd00327           2 GLGITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISGGPAYSVNQACATGLTALALAVQQ   81 (254)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHH
T ss_conf             98844999999999999998299854688999999787502247999999982999988066120243777999999999


Q ss_pred             HHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC--CCCEEEEEECCCCCCCCEEECCCCC
Q ss_conf             96415565316763022432224566323234544312344026544654344--5410123203555556177548765
Q gi|254780497|r  127 IRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGDGAGALILEGVEVKGSSMAD--TGILSTYLCSDGSYIDKLYVDGGPS  204 (324)
Q Consensus       127 i~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGDGAaA~ll~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  204 (324)
                      |++|+++++||+++|.             ++|||||+|++|++.+........  ..+.+.....++             
T Consensus        82 i~~G~~~~vlv~g~e~-------------~~~gdGAga~vl~~~~~a~~~~~~~~~~i~~~~~~~~g-------------  135 (254)
T cd00327          82 VQNGKADIVLAGGSEE-------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDG-------------  135 (254)
T ss_pred             HHHCCCCEEEECCCEE-------------EEECCCCEEEEECCHHHHHCCCCCEEEEEECCCCCCCC-------------
T ss_conf             9958999899738768-------------87067608887302456653898514778513123469-------------


Q ss_pred             CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHH-----HHHHHHHH
Q ss_conf             4443320010320244455777777788889874001000121024444415899999971978767-----33658651
Q gi|254780497|r  205 TSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDK-----VIVTVDIH  279 (324)
Q Consensus       205 ~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~-----~~~~~~~~  279 (324)
                         .        ..++....+...+.++++|+++|++++|||+|.+||.|.++.+.+..++.++.++     +..+..+|
T Consensus       136 ---~--------~~~~~p~~~~~~~~i~~al~~agl~~~dId~v~~H~tgt~i~D~iE~~a~~~~~~~~~~~i~s~k~~~  204 (254)
T cd00327         136 ---A--------SMVPAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMT  204 (254)
T ss_pred             ---C--------CCCCCCCHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf             ---9--------86627887899999999999839986452579978887835459999865340069988706740141


Q ss_pred             CCCHHHHHHHHHHHHH---HCCCC----CCCCEEEEEEECCCCCEEEEEE
Q ss_conf             9330126999999999---80688----9998999999714501456878
Q gi|254780497|r  280 GNTSAASIPLALAVAV---KEGRV----KKGDCLLLEAMGGGFTSGTVLL  322 (324)
Q Consensus       280 Gn~~sas~~~~L~~~~---~~g~l----~~Gd~vll~~~G~G~s~~a~ll  322 (324)
                      ||+.+|+.++.|.+.+   +.+.+    ++++++++.+||.|.+|+++++
T Consensus       205 GH~~~Asg~~~l~~~~l~l~~~~ippt~~~~~~~~~~~fG~Ggt~~~~vl  254 (254)
T cd00327         205 GHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL  254 (254)
T ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEEEC
T ss_conf             54299999999999999985598697899999999957564711057869


No 20 
>TIGR01835 HMG-CoA-S_prok hydroxymethylglutaryl-CoA synthase; InterPro: IPR011554   Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase.    Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA .   HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria . In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi . In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes , .   This entry represents HMG-CoA synthase enzymes found in a limited spectrum of mostly Gram-positive bacteria, which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway..
Probab=100.00  E-value=8.3e-37  Score=254.65  Aligned_cols=296  Identities=19%  Similarity=0.234  Sum_probs=238.8

Q ss_pred             EEEEEEEEECCCCEECHHHHHH-----HHCCCHHHHHHCCC---CCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             6999999964984117889998-----80999878110247---518898289889999999999999974021235443
Q gi|254780497|r    4 STVRGIGLSLPRRVLSNSDLES-----IVDTSDGWIKRRVG---ISRRHIAGKDETTASLGEAAARDALHHAEMSVDDID   75 (324)
Q Consensus         4 ~~I~~~g~ylP~~~v~~~el~~-----~~~~~~~~i~~~~G---I~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id   75 (324)
                      ++|..|+.|+|+++++-++|++     .-|..+|++.+-+|   -++-.+.+.+|+.++||+.||+.-|++.+++.++||
T Consensus         1 IGI~~I~F~~p~~yl~~~~LAEnPLYF~~gv~p~K~~~GIgatLQ~~~~~~~~~eDiVTmAA~Aa~~Il~~~nLd~~~Id   80 (412)
T TIGR01835         1 IGIDKISFFTPQYYLDLTALAENPLYFARGVDPEKFSKGIGATLQKKMAVPPIDEDIVTMAASAAKPILDRNNLDKQKID   80 (412)
T ss_pred             CCCCHHHHHCCCCCCCHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             97011234403000353566304114541766435757743677765068978864578899999974324206844234


Q ss_pred             EEEEECCCCCCCCCCCCCCHHHHHHCC-CCC-----CCCCCCCCCCHHHHHHHHHHHHHHCCC-CCCEEEEECCCCCCCC
Q ss_conf             366501223345898531001122026-864-----444210122003467888998964155-6531676302243222
Q gi|254780497|r   76 LIIVATSTPDQTFPSTAVNIQNRLGMK-RGF-----AFDMQAVCSGFVYAVTTADSYIRSGVV-RRVMVIGSDTFSRIVD  148 (324)
Q Consensus        76 ~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~-----~~di~~~C~~~~~al~~A~~li~~g~~-~~~Lvv~~e~~S~~~d  148 (324)
                      .||++|.|+-+..++.|.+|++.||+. .|.     +|+|.++|.|.+.|||+|...++..|. ++|||+++|+. +   
T Consensus        81 ~Vi~gTESgID~SKAaavyvh~LLgl~p~cRGnnFL~~ElK~ACYGATAaLq~A~~hv~~~P~s~kVLViaSDiA-k---  156 (412)
T TIGR01835        81 MVIFGTESGIDQSKAAAVYVHGLLGLQPFCRGNNFLSFELKQACYGATAALQMAKGHVARSPNSRKVLVIASDIA-K---  156 (412)
T ss_pred             EEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEE-E---
T ss_conf             789751052668999999999982778431045422432777779999999999999851888660168886311-2---


Q ss_pred             CCCCCCC-CCCCCCCCEEEEECCCCCCCCCCCCC-CEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHH
Q ss_conf             4566323-23454431234402654465434454-101232035555561775487654443320010320244455777
Q gi|254780497|r  149 WSDRSTC-VLFGDGAGALILEGVEVKGSSMADTG-ILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEK  226 (324)
Q Consensus       149 ~~d~~~~-~lfGDGAaA~ll~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  226 (324)
                      |....+. .+-|-||.|+|++.+|.-........ +++     +  -..++|.|.+.      ..-..||+..-+.++..
T Consensus       157 Y~~~t~GE~TQGAGAVA~Li~~dP~~l~i~~~~~G~~T-----~--DimDFWRP~y~------~~a~VdG~~S~~~Yl~a  223 (412)
T TIGR01835       157 YGLETPGEATQGAGAVAMLISADPKLLAINEDSVGLYT-----D--DIMDFWRPNYS------TTALVDGQYSTEQYLNA  223 (412)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCEEC-----C--CCCCCCCCCCC------CCCEECCCHHHHHHHHH
T ss_conf             27798988616689999987418012001587653121-----3--31212178988------55316460468899999


Q ss_pred             HHHHHHHHHHHHHCCCCCCCC---CCCCCCCHHH-HHHHHHHC---CCCHH--HHH-----H--HHH------HHCCCHH
Q ss_conf             777788889874001000121---0244444158-99999971---97876--733-----6--586------5193301
Q gi|254780497|r  227 AVELIEKVFDSTHLTIENIDW---FVPHQANWRI-INSIVDKM---KIPFD--KVI-----V--TVD------IHGNTSA  284 (324)
Q Consensus       227 ~~~~i~~~L~~~gl~~~did~---~~~Hq~~~~~-~~~~~~~l---gl~~e--~~~-----~--~~~------~~Gn~~s  284 (324)
                      +.++|++.-++.|++.+|++.   ||+|+|=.+| .++....|   .-+.+  ++-     +  --+      +.||+++
T Consensus       224 ~~~aW~dy~~~~~~~l~DfaanYR~~fH~PftKMg~Ka~~~~l~~~~~~~~k~~~~~~y~~Si~Y~~Gveaam~vGN~YT  303 (412)
T TIGR01835       224 LEEAWNDYKERTGLSLEDFAANYRFCFHVPFTKMGLKALRHILKKNKEDEDKDSVQKAYEESILYNRGVEAAMEVGNLYT  303 (412)
T ss_pred             HHHHHHHHHHHCCCCHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf             99999999972389756753157178707874203799999874047812689999987533678523443333054137


Q ss_pred             HHHHHHHHHHHHCC---CCCCCCEEEEEEECCCCC
Q ss_conf             26999999999806---889998999999714501
Q gi|254780497|r  285 ASIPLALAVAVKEG---RVKKGDCLLLEAMGGGFT  316 (324)
Q Consensus       285 as~~~~L~~~~~~g---~l~~Gd~vll~~~G~G~s  316 (324)
                      +|++|+|..+|++-   .+..|++|.|+|||+|-.
T Consensus       304 GSlyLgL~sLLena~sk~d~tG~~Igl~SYGSGav  338 (412)
T TIGR01835       304 GSLYLGLASLLENAQSKEDLTGDKIGLFSYGSGAV  338 (412)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCE
T ss_conf             88999999986303664431311111001252201


No 21 
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative; InterPro: IPR004656   This family of archaeal proteins shows considerable homology and identical active site residues to FabH, the beta-ketoacyl-acyl carrier protein synthase III of bacteria and plants. The archaeal species in which it is found, however, do not have a readily detectable homolog of acyl carrier protein itself, suggesting the condensation of the acyl group with some other carrier. In Methanococcus jannaschii, Q58941 from SWISSPROT, Cys-112 is the site of acyl group attachment and His-234 and Asn-237 are also active site residues by homology to FabH.   Closely related bacterial families include a polyketide antibiotic (2,4-diacetylphloroglucinol) biosynthesis protein from Pseudomonas fluorescens and an uncharacterised protein from Staphylococcus carnosus. .
Probab=100.00  E-value=1.2e-32  Score=228.13  Aligned_cols=300  Identities=20%  Similarity=0.284  Sum_probs=240.9

Q ss_pred             EEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
Q ss_conf             69999999649841178899988099987811024751889828988999999999999997402123544336650122
Q gi|254780497|r    4 STVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATST   83 (324)
Q Consensus         4 ~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~   83 (324)
                      ++|.|.|.|+|..++.+||+.+.|+.+++.|.+..-|+++.+...||++.+++++|+|++|+|+.+||+||..|.++|.+
T Consensus         2 ~GivGyG~y~P~yri~~eei~rvW~~dp~~i~~g~~~~ek~vP~~ded~~ti~~eaarnal~r~~idP~~i~a~~~Gses   81 (347)
T TIGR00748         2 AGIVGYGAYIPKYRIKVEEIARVWGDDPEAISKGLLVEEKAVPGLDEDTATIAVEAARNALKRAKIDPKDIGAVYVGSES   81 (347)
T ss_pred             CCEEEECCCCCCEEECHHHHHHHHCCCHHHHHCCEEEEECCCCCCCCCCEEEHHHHHHHHHHHCCCCHHHCCEEEECCCC
T ss_conf             41576210115311102344433056636865570255324788663400111467787776304784164177960568


Q ss_pred             CCCCCCCCCCCHHHHHHCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             3345898531001122026864-444210122003467888998964155653167630224322245663232345443
Q gi|254780497|r   84 PDQTFPSTAVNIQNRLGMKRGF-AFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGDGA  162 (324)
Q Consensus        84 ~~~~~p~~a~~i~~~LGl~~~~-~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGDGA  162 (324)
                      .+|...+++..|++.++.++.+ +-|+..+|.++..+|+.+..++++|..+++|.|++|.....  +.|.-- +.-+.|.
T Consensus        82 ~PyavkP~~t~~aea~~atP~l~aad~efaCkaGt~~~q~~~G~v~sG~~ky~la~GadtaqG~--PGd~le-~ta~aGG  158 (347)
T TIGR00748        82 KPYAVKPTATIVAEAIEATPDLTAADLEFACKAGTAGIQACIGLVESGLIKYGLAIGADTAQGA--PGDALE-YTAAAGG  158 (347)
T ss_pred             CCCEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCCE-ECCCCCC
T ss_conf             6510064035554454057574022135555521688998875676446665543124102689--863100-0003785


Q ss_pred             CEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             12344026544654344541012320355555617754876544433200103202444557777777888898740010
Q gi|254780497|r  163 GALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTI  242 (324)
Q Consensus       163 aA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~  242 (324)
                      +|.+++.......    ..+-.++..+.  -...++...+...++....|.- .+..|++++    ...+.++++.|+++
T Consensus       159 aa~~iG~~~~~~~----a~~~~~ysy~t--dtPdf~rr~~~~yPrhG~rftG-ePayf~hv~----~aa~~lm~~~G~~~  227 (347)
T TIGR00748       159 AAYIIGEKNSEVV----AEFEGTYSYTT--DTPDFWRREGKPYPRHGGRFTG-EPAYFKHVV----TAAKGLMEKLGLKP  227 (347)
T ss_pred             EEEEECCCCHHHH----HHHHCCEEEEE--CCCHHHHHCCCCCCCCCCCCCC-CHHHHHHHH----HHHHHHHHHHCCCC
T ss_conf             2688607512234----31103322420--6815664067878877875467-637899999----99999999727882


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH-H-HHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEE
Q ss_conf             00121024444415899999971978767336-5-86519330126999999999806889998999999714501456
Q gi|254780497|r  243 ENIDWFVPHQANWRIINSIVDKMKIPFDKVIV-T-VDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFTSGT  319 (324)
Q Consensus       243 ~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~-~-~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~a  319 (324)
                      +|+|+.++||||.++.-..++.||++.|+... . -..+||++|...++.|...++.  .++|++||.++||+|--.-+
T Consensus       228 ~d~dy~vfhqPn~kf~~~~a~~lG~~~e~~~~Gll~~~iGntysGa~~~G~~~~ld~--~~~G~ril~vs~GsGaGsda  304 (347)
T TIGR00748       228 EDFDYAVFHQPNGKFYLKAARILGFKKEQVKPGLLTPVIGNTYSGATPVGLSAVLDV--AEPGERILAVSYGSGAGSDA  304 (347)
T ss_pred             CCCCEEEEECCCCCEEEEEHHHHCCCHHCEECCCCCCCCCCCCCCHHHHHHHHHHHC--CCCCCEEEEEEECCCCCCCE
T ss_conf             314147875587504441123407510100001012333543233145546777530--47886489996067767533


No 22 
>pfam00195 Chal_sti_synt_N Chalcone and stilbene synthases, N-terminal domain. The C-terminal domain of Chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in this N-terminal domain.
Probab=99.95  E-value=2.1e-27  Score=194.60  Aligned_cols=168  Identities=20%  Similarity=0.274  Sum_probs=137.4

Q ss_pred             EEEEEEEEEECCCCEECHHHHHHHH----CC---CH-----HHHHHCCCCCEEEEECCCC--------------------
Q ss_conf             2699999996498411788999880----99---98-----7811024751889828988--------------------
Q gi|254780497|r    3 RSTVRGIGLSLPRRVLSNSDLESIV----DT---SD-----GWIKRRVGISRRHIAGKDE--------------------   50 (324)
Q Consensus         3 ~~~I~~~g~ylP~~~v~~~el~~~~----~~---~~-----~~i~~~~GI~~R~~~~~~e--------------------   50 (324)
                      .++|.|||+.+|++.++++++.+..    +.   .+     ..|.+++||++||..-++|                    
T Consensus        16 pA~Il~IgTA~Pp~~~~Q~~~~d~~~~~~~~~~~~~~k~~l~ri~~~sgI~~R~~vl~~e~~~~~P~~~~~~~ps~~~R~   95 (228)
T pfam00195        16 PATILAIGTATPSNCVDQSTYPDYYFRVTKSEHLTDLKEKFQRICEKSTIKKRYMVLTEEILKENPELCTEMAPSLDARQ   95 (228)
T ss_pred             CEEEEEEEEECCCCEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCCCCCHHHHH
T ss_conf             96999999718995524899999999973443242678999989984698831586176876149551025699989999


Q ss_pred             -----CHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCC-CCCCC-CCCCCHHHHHHHH
Q ss_conf             -----9999999999999974021235443366501223345898531001122026864-44421-0122003467888
Q gi|254780497|r   51 -----TTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGF-AFDMQ-AVCSGFVYAVTTA  123 (324)
Q Consensus        51 -----~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~-~~di~-~~C~~~~~al~~A  123 (324)
                           ...+|+.+|+++||+++|++++||++||++|+|+ +..|+...+|.++||+++.. -+.|. .||+|++.+|++|
T Consensus        96 ~~~~~~a~~La~~Aa~~AL~~aG~~~~dIthlv~vt~TG-~~~Pg~d~~l~~~LGL~~~v~R~~i~~~GC~gg~~gL~~A  174 (228)
T pfam00195        96 DIAVVEVPKLGKEAALKAIKEWGQPKSKITHLVFCTTSG-VDMPGADYQLTKLLGLRPSVKRVMLYQQGCFAGGTVLRLA  174 (228)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCC-CCCCCHHHHHHHHCCCCCCCHHEEEECCCCHHHHHHHHHH
T ss_conf             999999999999999999999588988999999994799-9887478999998298987211141145416489999999


Q ss_pred             HHHHHHCCCCCCEEEEECCCCCCCCC---CC---CCCCCCCCCCCCEEEEECCC
Q ss_conf             99896415565316763022432224---56---63232345443123440265
Q gi|254780497|r  124 DSYIRSGVVRRVMVIGSDTFSRIVDW---SD---RSTCVLFGDGAGALILEGVE  171 (324)
Q Consensus       124 ~~li~~g~~~~~Lvv~~e~~S~~~d~---~d---~~~~~lfGDGAaA~ll~~~~  171 (324)
                      .+++++++..+||||++|.+|-.+..   .+   .....||||||+|+||+.++
T Consensus       175 ~~~~~~~p~~~VLvv~~Elcsl~f~~~~~~~~~~lV~~aLFgDGAaAvvv~adP  228 (228)
T pfam00195       175 KDLAENNKGARVLVVCSEITAVTFRGPSETHLDSLVGQALFGDGAAAVIIGSDP  228 (228)
T ss_pred             HHHHHHCCCCEEEEEEEEHHHEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCC
T ss_conf             999982999879999824011030488765677773441202751799971699


No 23 
>TIGR01833 HMG-CoA-S_euk hydroxymethylglutaryl-CoA synthase; InterPro: IPR010122   Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase.    Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA .   HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria . In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi . In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes , .   This entry is specific for eukaryotic HMG-CoA synthase enzymes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process.
Probab=99.93  E-value=8.2e-25  Score=178.13  Aligned_cols=302  Identities=16%  Similarity=0.190  Sum_probs=214.5

Q ss_pred             CEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf             22699999996498411788999880999878110247518898289889999999999999974021235443366501
Q gi|254780497|r    2 IRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVAT   81 (324)
Q Consensus         2 ~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s   81 (324)
                      .+|+|.|+..|+|...|.+.|||..-+.+.++=---.|..+--++.+-|+...|+..|+.++++|..|++++|+.|=++|
T Consensus         3 ~dVGI~al~~yfP~~yV~Q~~LE~yDgVs~GKYTiGLGq~~mgFc~drEDI~Sl~LTvv~~L~er~~id~~~IGRLEVGT   82 (461)
T TIGR01833         3 KDVGILALEIYFPSQYVDQAELEKYDGVSAGKYTIGLGQTKMGFCTDREDINSLCLTVVSKLMERYQIDYNKIGRLEVGT   82 (461)
T ss_pred             CCCEEEEEEEECCCCCCCHHHHHHHCCCCCCCEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCC
T ss_conf             87406888863688752657786326888895034235662000022101566658999999986078715431101042


Q ss_pred             CCCCCCCCCCCCCHH---HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC--CCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf             223345898531001---12202686444421012200346788899896415--5653167630224322245663232
Q gi|254780497|r   82 STPDQTFPSTAVNIQ---NRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGV--VRRVMVIGSDTFSRIVDWSDRSTCV  156 (324)
Q Consensus        82 ~~~~~~~p~~a~~i~---~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~--~~~~Lvv~~e~~S~~~d~~d~~~~~  156 (324)
                      .|--+-..|.=+.+.   ++-|-++....|-.++|-|++.||-.|..||++..  .|++||||+|..  +  |..-...+
T Consensus        83 ETiiDKSKSVKtVLMQLF~~sGNTDvEGiDt~NACYGGTaALFNa~~WiESssWDGRyalVVagDiA--v--Ya~G~ARP  158 (461)
T TIGR01833        83 ETIIDKSKSVKTVLMQLFEESGNTDVEGIDTVNACYGGTAALFNAINWIESSSWDGRYALVVAGDIA--V--YAKGNARP  158 (461)
T ss_pred             EEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEE--E--CCCCCCCC
T ss_conf             5341001035577677542057954353255341122479997545432126753034124532111--3--48889887


Q ss_pred             CCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHH-------
Q ss_conf             3454431234402654465434454101232035555561775487654443320010320244455777777-------
Q gi|254780497|r  157 LFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVE-------  229 (324)
Q Consensus       157 lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------  229 (324)
                      +-|.||.|+|+++..|-   ..+.++-++|..+--.|+-    |.-     ...+-..||+...+-+++++-.       
T Consensus       159 TGGAGavAmLiGp~APi---vfe~glR~shM~HaYDFYK----PdL-----~SEYP~VDGklS~~CYl~ALD~cY~~y~~  226 (461)
T TIGR01833       159 TGGAGAVAMLIGPNAPI---VFERGLRASHMQHAYDFYK----PDL-----ASEYPVVDGKLSIQCYLSALDRCYKSYCK  226 (461)
T ss_pred             CHHHHHHHHHHCCCCCE---EECCCCCHHHHCCCCCCCC----CCC-----CCCCCEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf             52899999975689888---7427754122214533368----888-----31685044530587899898888899888


Q ss_pred             ----HHHHHHHH-HHCCCCCCCCCCCCCCC-HHHHHHHHHHC------------------------CCCH---------H
Q ss_conf             ----78888987-40010001210244444-15899999971------------------------9787---------6
Q gi|254780497|r  230 ----LIEKVFDS-THLTIENIDWFVPHQAN-WRIINSIVDKM------------------------KIPF---------D  270 (324)
Q Consensus       230 ----~i~~~L~~-~gl~~~did~~~~Hq~~-~~~~~~~~~~l------------------------gl~~---------e  270 (324)
                          ...+.=.. ...+.+++|++|+|.|- +.+.+.+++-|                        ++.-         |
T Consensus       227 K~~~~~~~~~~~~~~f~l~~~dy~vFH~PyCKlVqKS~ARLlyNDF~~~~~~~~~~~~~~~~~~l~~l~~~~ty~drd~E  306 (461)
T TIGR01833       227 KIEKQLGKSGKDGRKFTLDDFDYMVFHSPYCKLVQKSLARLLYNDFLANPSSETDTALYEVLEALSTLKLEDTYTDRDLE  306 (461)
T ss_pred             HHHHHHHCCCCCCCCCCHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHH
T ss_conf             89987420244676330634473675077322689999999888876322344556666667765337711200232588


Q ss_pred             HHHHH----------------HHHHCCCHHHHHHHHHHHHHHCCCCC--CCCEEEEEEECCCCCEEE
Q ss_conf             73365----------------86519330126999999999806889--998999999714501456
Q gi|254780497|r  271 KVIVT----------------VDIHGNTSAASIPLALAVAVKEGRVK--KGDCLLLEAMGGGFTSGT  319 (324)
Q Consensus       271 ~~~~~----------------~~~~Gn~~sas~~~~L~~~~~~g~l~--~Gd~vll~~~G~G~s~~a  319 (324)
                      |.+..                -.+.||++++|++-.|..++.+....  .|.+|.+.|||+|++.+.
T Consensus       307 K~~~~~sk~~f~~k~~~Sl~~~~~~GNMYT~SlYg~laSLL~~~~~~eLaGkRv~~FSYGSGlAAs~  373 (461)
T TIGR01833       307 KAFMKISKELFDKKVKPSLLLPTQVGNMYTASLYGCLASLLSSKSADELAGKRVGLFSYGSGLAASL  373 (461)
T ss_pred             HHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCEEEEEECCHHHHHHH
T ss_conf             9999999998861020002100057864007899999999740780130775699863624554321


No 24 
>pfam01154 HMG_CoA_synt_N Hydroxymethylglutaryl-coenzyme A synthase N terminal.
Probab=99.92  E-value=4.5e-24  Score=173.40  Aligned_cols=165  Identities=18%  Similarity=0.173  Sum_probs=147.0

Q ss_pred             EEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf             26999999964984117889998809998781102475188982898899999999999999740212354433665012
Q gi|254780497|r    3 RSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATS   82 (324)
Q Consensus         3 ~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~   82 (324)
                      +|+|.+++.|+|...++.++|++..|.+++++.+..|.+++.+++++|+..+||+.|++++|++.+++|++|+.|+++|.
T Consensus         1 ~VGI~~i~~Y~P~~~v~~~~La~~rg~d~~K~~~GlG~~~mav~~~~ED~vTmAanAa~~ll~~~~i~~~~Ig~l~vgTE   80 (171)
T pfam01154         1 DVGIVALEIYFPSQYVDQAELEKYDGVSAGKYTIGLGQTKMGFCTDREDINSLCLTVVQKLMERNNLDYDCIGRLEVGTE   80 (171)
T ss_pred             CCCEEEEEEECCHHEECHHHHHHHHCCCHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEECCC
T ss_conf             98987898847711135999999959898885204586354279997279999999999999873999888407996377


Q ss_pred             CCCCCCCCCCCCHHHHHHCC-CC--CCCCCCCCCCCHHHHHHHHHHHHHHCC--CCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf             23345898531001122026-86--444421012200346788899896415--56531676302243222456632323
Q gi|254780497|r   83 TPDQTFPSTAVNIQNRLGMK-RG--FAFDMQAVCSGFVYAVTTADSYIRSGV--VRRVMVIGSDTFSRIVDWSDRSTCVL  157 (324)
Q Consensus        83 ~~~~~~p~~a~~i~~~LGl~-~~--~~~di~~~C~~~~~al~~A~~li~~g~--~~~~Lvv~~e~~S~~~d~~d~~~~~l  157 (324)
                      +.-+...+++.+|++.||++ ++  ..+|+.++|.|++.||+.|.+++++++  .|++|||++|.. ++ +...  .-..
T Consensus        81 S~iD~SKs~~t~l~~ll~~~~~~~~~~~e~k~ACyggTaAL~~a~~~v~s~~~~~k~alVV~sDiA-~y-~~~~--~e~T  156 (171)
T pfam01154        81 TIIDKSKSVKTVLMQLFEESGNTDIEGIDTTNACYGGTAALFNALNWIESSSWDGRYALVVAGDIA-IY-AKGN--ARPT  156 (171)
T ss_pred             CCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC-CC-CCCC--CCCC
T ss_conf             645665568999999837657887403330010698999999999999828878963999984100-13-7999--8756


Q ss_pred             CCCCCCEEEEECCC
Q ss_conf             45443123440265
Q gi|254780497|r  158 FGDGAGALILEGVE  171 (324)
Q Consensus       158 fGDGAaA~ll~~~~  171 (324)
                      -|-||.|+|+++..
T Consensus       157 qGAGAVAmLv~~na  170 (171)
T pfam01154       157 GGAGAVAMLIGPNA  170 (171)
T ss_pred             CCCCEEEEEECCCC
T ss_conf             77035899975899


No 25 
>KOG1393 consensus
Probab=99.91  E-value=9.2e-23  Score=165.03  Aligned_cols=304  Identities=17%  Similarity=0.188  Sum_probs=212.7

Q ss_pred             EEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf             26999999964984117889998809998781102475188982898899999999999999740212354433665012
Q gi|254780497|r    3 RSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATS   82 (324)
Q Consensus         3 ~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~   82 (324)
                      +++|.++..|+|.+.|.++|+++..+.+.++..-..|-.+..++.+.|+...|+..++++++++.+++++.|+.|-++|.
T Consensus        11 dvGI~aieiyfP~~yV~Q~elEk~d~vs~gKytIGLGq~~MgfcsdrEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVGTE   90 (462)
T KOG1393          11 DVGIIAIEIYFPSQYVDQEELEKFDGVSAGKYTIGLGQTQMGFCSDREDIISLSLTVVSRLMERYNIDPDSIGRLEVGTE   90 (462)
T ss_pred             CCCEEEEEEECCCCCCCHHHHHHCCCCCCCCEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEECCE
T ss_conf             35426899976756667666762488544625763475121253763320035599999999983898656411773230


Q ss_pred             CCCCCCCCCCCCHHHHH---HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC--CCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf             23345898531001122---0268644442101220034678889989641--556531676302243222456632323
Q gi|254780497|r   83 TPDQTFPSTAVNIQNRL---GMKRGFAFDMQAVCSGFVYAVTTADSYIRSG--VVRRVMVIGSDTFSRIVDWSDRSTCVL  157 (324)
Q Consensus        83 ~~~~~~p~~a~~i~~~L---Gl~~~~~~di~~~C~~~~~al~~A~~li~~g--~~~~~Lvv~~e~~S~~~d~~d~~~~~l  157 (324)
                      |-..-..|.-+.+.+.+   |-++....|..++|-|+..||-.|..+|++.  ..|++|||++|+.-    |........
T Consensus        91 TiiDKSKSVKt~LMqLF~~sgNtdIEGiDttnACYGGtaALfnavnWiESssWDGr~aivV~gDIAv----Y~~G~aRpT  166 (462)
T KOG1393          91 TIIDKSKSVKTVLMQLFEESGNTDIEGIDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDIAV----YAKGNARPT  166 (462)
T ss_pred             ECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEE----ECCCCCCCC
T ss_conf             0245325799999997101389754344344301233899987765521144577414899733787----147887777


Q ss_pred             CCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHH----HHHHHH
Q ss_conf             4544312344026544654344541012320355555617754876544433200103202444557777----777888
Q gi|254780497|r  158 FGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKA----VELIEK  233 (324)
Q Consensus       158 fGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~i~~  233 (324)
                      -|-||.|+|+++..+-   ..+.++..+|+.+...++.    |.     ....+-..||+...+.+...+    .....+
T Consensus       167 GGAgAVAmLIgPnApi---~ferglr~thM~hayDFyK----Pd-----l~SEyPvVDGklSi~cYl~Ald~cY~~~~kK  234 (462)
T KOG1393         167 GGAGAVAMLIGPNAPI---IFERGLRATHMQHAYDFYK----PD-----LLSEYPVVDGKLSIQCYLSALDRCYTVYRKK  234 (462)
T ss_pred             CCCCEEEEEECCCCCE---EECCCCHHHHHHHHHHCCC----CC-----CCCCCCEECCEEHHHHHHHHHHHHHHHHHHH
T ss_conf             8733589997699855---7445303446565430148----88-----7786862568021898999999999999999


Q ss_pred             HH----HHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCC----------C-------------------------------
Q ss_conf             89----87400100012102444441589999997197----------8-------------------------------
Q gi|254780497|r  234 VF----DSTHLTIENIDWFVPHQANWRIINSIVDKMKI----------P-------------------------------  268 (324)
Q Consensus       234 ~L----~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl----------~-------------------------------  268 (324)
                      .-    ...+...+++|++++|.|--++.++-..+|-.          +                               
T Consensus       235 ~~~~~~~~~~~~l~~fdy~ifHsP~cKlvqKs~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~  314 (462)
T KOG1393         235 IAAQWQKSGSDNLNSFDYIIFHSPYCKLVQKSLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPI  314 (462)
T ss_pred             HHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             99974335676546577599857035667877777543144414001542001223333000111047788899876777


Q ss_pred             -HHHHHHH---HHHHCCCHHHHHHHHHHHHHHCC--CCCCCCEEEEEEECCCCCEEEEEE
Q ss_conf             -7673365---86519330126999999999806--889998999999714501456878
Q gi|254780497|r  269 -FDKVIVT---VDIHGNTSAASIPLALAVAVKEG--RVKKGDCLLLEAMGGGFTSGTVLL  322 (324)
Q Consensus       269 -~e~~~~~---~~~~Gn~~sas~~~~L~~~~~~g--~l~~Gd~vll~~~G~G~s~~a~ll  322 (324)
                       .+|+-..   -.+.||++++|++..|..++...  .--.|++|.+.|||+|++.+.--+
T Consensus       315 ~~~Kt~~sl~~~~~~GNmYTaSly~~l~sll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~  374 (462)
T KOG1393         315 FKKKTKPSLLAPRRNGNMYTASLYASLASLLSAVPADELAGKRIGMFSYGSGLAASMFSL  374 (462)
T ss_pred             HHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHCCEEEEEEECCCCHHHEEEE
T ss_conf             775135116741247742249899999998851660443103788996057641204778


No 26 
>pfam08541 ACP_syn_III_C 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal. This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.
Probab=99.90  E-value=2.5e-24  Score=175.03  Aligned_cols=90  Identities=53%  Similarity=0.924  Sum_probs=88.4

Q ss_pred             HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC
Q ss_conf             98740010001210244444158999999719787673365865193301269999999998068899989999997145
Q gi|254780497|r  235 FDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGG  314 (324)
Q Consensus       235 L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G  314 (324)
                      |+++|++++|||+|++||+|+++++.++++||+|+||++.++++|||++|+++|++|++++++++++|||+|++++||+|
T Consensus         1 L~~~g~~~~dId~~i~Hq~~~~~~~~i~~~lgi~~~k~~~~~~~~GN~~sasip~~L~~~~~~~~i~~Gd~vll~~~G~G   80 (90)
T pfam08541         1 LEKAGLTPDDIDWFVPHQANLRIIDAVAKRLGLPPEKVVVNLDRYGNTSAASIPLALDEAVEEGKLKPGDLVLLVGFGAG   80 (90)
T ss_pred             CCCCCCCHHHCCEEEECCCCHHHHHHHHHHHCCCHHHCEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCC
T ss_conf             94404997999999978888899999999819791325032440377620239999999998199999998999987210


Q ss_pred             CCEEEEEEEC
Q ss_conf             0145687869
Q gi|254780497|r  315 FTSGTVLLRW  324 (324)
Q Consensus       315 ~s~~a~llrw  324 (324)
                      ++|+++++||
T Consensus        81 ~s~~~~v~~~   90 (90)
T pfam08541        81 LTWGAAVLRW   90 (90)
T ss_pred             HHHEEEEEEC
T ss_conf             4117989979


No 27 
>pfam08392 FAE1_CUT1_RppA FAE1/Type III polyketide synthase-like protein. The members of this family are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region featured in this family contains the active site residues, as well as motifs involved in substrate binding.
Probab=99.83  E-value=1.3e-19  Score=144.92  Aligned_cols=198  Identities=17%  Similarity=0.195  Sum_probs=144.3

Q ss_pred             EEEEEEEEEECCC--CEECHHHHHHHHC----CCHH------HHHHCCCCCEEEEECCC-------CCH------HH-HH
Q ss_conf             2699999996498--4117889998809----9987------81102475188982898-------899------99-99
Q gi|254780497|r    3 RSTVRGIGLSLPR--RVLSNSDLESIVD----TSDG------WIKRRVGISRRHIAGKD-------ETT------AS-LG   56 (324)
Q Consensus         3 ~~~I~~~g~ylP~--~~v~~~el~~~~~----~~~~------~i~~~~GI~~R~~~~~~-------e~~------~~-la   56 (324)
                      .|++...++|.|+  .+++.+.+.+...    .+++      +|.+++||.+..+.++.       .+.      .+ .-
T Consensus         8 ~vYLvDfaC~kp~~~~kv~~~~~~e~~~~~~~f~~~s~~F~~kil~rSGlG~eTy~P~~~~~~p~~~s~~~ar~Eae~v~   87 (290)
T pfam08392         8 PVYLVDYACYKPPDDRKVSTETFMEHIRRNGKFDEESLDFQRKILERSGLGEETYVPRSVLEIPPNPTMAEAREEAEEVM   87 (290)
T ss_pred             CEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf             88998553207972031699999999986589986899999999996489998857825425899987999999999999


Q ss_pred             HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCC-CCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf             9999999974021235443366501223345898531001122026-86444421-012200346788899896415565
Q gi|254780497|r   57 EAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQ-AVCSGFVYAVTTADSYIRSGVVRR  134 (324)
Q Consensus        57 ~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~-~~C~~~~~al~~A~~li~~g~~~~  134 (324)
                      -.|+.++|+++|++|+|||.||+. |+...+.||.+++|.++.|++ ++..|.++ +||++++.++++|.++++..+..+
T Consensus        88 f~avd~Lf~ktgv~P~dIdiLVvN-cSlf~PtPSLsamivNrykmR~di~s~nLsGMGCSAglIsIdLAk~lL~~~~ns~  166 (290)
T pfam08392        88 FGAVDELFAKTGVRPRDIGILVVN-CSLFNPTPSLSAMIVNRYKMRGDIKSYNLSGMGCSAGLISIDLAKDLLQVHPNTY  166 (290)
T ss_pred             HHHHHHHHHHCCCCHHHCCEEEEE-CCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCE
T ss_conf             999999999739987689999996-7788888528999988606864300633667651134757999999998489965


Q ss_pred             CEEEEECCCCCCCC-CCCCC---CCCCCCCCCCEEEEECCCCCC--CCCCCCCCEEEEEECCCCCCCCEEECC
Q ss_conf             31676302243222-45663---232345443123440265446--543445410123203555556177548
Q gi|254780497|r  135 VMVIGSDTFSRIVD-WSDRS---TCVLFGDGAGALILEGVEVKG--SSMADTGILSTYLCSDGSYIDKLYVDG  201 (324)
Q Consensus       135 ~Lvv~~e~~S~~~d-~~d~~---~~~lfGDGAaA~ll~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (324)
                      ||||+.|..|...= -.||.   +-.+|.-|+||++|++.....  ......+++-+|..++.+.+..++.+.
T Consensus       167 ALVvSTE~it~n~Y~G~~rsmLl~NcLFR~GgAAiLLSN~~~~r~rAky~L~h~VRth~ga~D~sy~cv~q~E  239 (290)
T pfam08392       167 ALVVSTENITPNWYAGNDRSMLLPNCLFRMGGAAILLSNKPADRRRAKYELVHTVRTHKGADDRAYRCVYQEE  239 (290)
T ss_pred             EEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCHHCEEEEEE
T ss_conf             9999853045445358736650140113577147983058443544523742078742676731005254500


No 28 
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.75  E-value=3.3e-17  Score=129.57  Aligned_cols=245  Identities=27%  Similarity=0.359  Sum_probs=157.7

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCE----EEEECCCCCCC---------------------CCCCCCCHHHHHHCCCCCC
Q ss_conf             9999999999999740212354433----66501223345---------------------8985310011220268644
Q gi|254780497|r   52 TASLGEAAARDALHHAEMSVDDIDL----IIVATSTPDQT---------------------FPSTAVNIQNRLGMKRGFA  106 (324)
Q Consensus        52 ~~~la~~Aa~~al~~a~~~~~~Id~----ii~~s~~~~~~---------------------~p~~a~~i~~~LGl~~~~~  106 (324)
                      ..-+|++|+++||+++|++++++.-    |+++++..++.                     .+..+++|...+|++ .++
T Consensus        11 vsl~al~aa~eAl~dAGl~~~~~~~~r~GV~~Gs~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~-Gp~   89 (332)
T cd00825          11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIH-GPA   89 (332)
T ss_pred             HHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCC
T ss_conf             9999999999999975999344578888999996883188898531232236864246655348999999996898-963


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCC-----------C------CC-CCCCCCCCCCCCCCCEEEEE
Q ss_conf             442101220034678889989641556531676302243-----------2------22-45663232345443123440
Q gi|254780497|r  107 FDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSR-----------I------VD-WSDRSTCVLFGDGAGALILE  168 (324)
Q Consensus       107 ~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~-----------~------~d-~~d~~~~~lfGDGAaA~ll~  168 (324)
                      +-+..+|++++.||..|..+|+.|+.+.+++.++|..+.           .      .. |......+.+|+||++++|+
T Consensus        90 ~tv~taCaS~l~Ai~~A~~~i~~G~~d~aivgg~~~~~~~~~~~~~~~~~~~~~~~~~rpFd~~~~G~v~gEGa~~lvLe  169 (332)
T cd00825          90 YDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALVVE  169 (332)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHH
T ss_conf             03135416889999999999983899874620312117989999999727789898878887889972002654035540


Q ss_pred             CCCCCCCCCC--CCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             2654465434--45410123203555556177548765444332001032024445577777778888987400100012
Q gi|254780497|r  169 GVEVKGSSMA--DTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENID  246 (324)
Q Consensus       169 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did  246 (324)
                      +.+.......  ...+.+.....|+...               .....+        .+...+.++++|++++++++|||
T Consensus       170 ~~~~A~~rg~~i~a~i~g~~~~~dg~~~---------------~~~~p~--------~~~~~~ai~~Al~~agi~p~~I~  226 (332)
T cd00825         170 ELEHALARGAHIYAEIVGTAATIDGAGM---------------GAFAPS--------AEGLARAAKEALAVAGLTVWDID  226 (332)
T ss_pred             HHHHHHHCCCCEEEEECCCEEECCCCCC---------------CCCCCC--------HHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             0888875289620331134587789878---------------887979--------99999999999998498820014


Q ss_pred             CCCCCCCCHHHH-----HHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHH---HHHCCCCCC----------------
Q ss_conf             102444441589-----99999719787673365865193301269999999---998068899----------------
Q gi|254780497|r  247 WFVPHQANWRII-----NSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAV---AVKEGRVKK----------------  302 (324)
Q Consensus       247 ~~~~Hq~~~~~~-----~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~---~~~~g~l~~----------------  302 (324)
                      ++-.|-.+....     +.+.+.++-..=.+-.+-..+||+.+++=.+.+..   +++.+.+.|                
T Consensus       227 yI~ahgtGt~~~D~~E~~Al~~~fg~~~~~v~S~Ks~~GH~~~AsG~~~li~~~lal~~~~ipp~~n~~~~~~~~~~~~~  306 (332)
T cd00825         227 YLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDEAGLNIVT  306 (332)
T ss_pred             EEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             79917786855559999999998578998210574564455265699999999999863960899998999833256677


Q ss_pred             ------CCEEEEEEECCCCCEEEE
Q ss_conf             ------989999997145014568
Q gi|254780497|r  303 ------GDCLLLEAMGGGFTSGTV  320 (324)
Q Consensus       303 ------Gd~vll~~~G~G~s~~a~  320 (324)
                            .++++.-+||-|=+-.++
T Consensus       307 ~~~~~~~~~~~~nsfGfGG~Na~v  330 (332)
T cd00825         307 ETTPRELRTALLNGFGLGGTNATL  330 (332)
T ss_pred             CCCCCCCCEEEEECCCCCCEEEEE
T ss_conf             776899989999670268140688


No 29 
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.73  E-value=7.1e-17  Score=127.44  Aligned_cols=99  Identities=23%  Similarity=0.267  Sum_probs=87.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             9889999999999999974021235443366501223345898531001122026-864444210122003467888998
Q gi|254780497|r   48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADSY  126 (324)
Q Consensus        48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~l  126 (324)
                      .+.++.||+.++++++|++++++|++||.|+++++.+....+..+..+.-..|++ ..+++.|++.|+|++.|+..|...
T Consensus        18 ~~~~~~~L~~~ai~~al~~agl~~~~Id~vi~G~~~~~g~g~n~aR~~al~aGlp~~vp~~tV~~aCaSG~~Ai~~A~~~   97 (386)
T cd00751          18 KDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQS   97 (386)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHH
T ss_conf             88989999999999999984989899998999950666656639999999769998886588842216879999999741


Q ss_pred             HHHCCCCCCEEEEECCCCCC
Q ss_conf             96415565316763022432
Q gi|254780497|r  127 IRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       127 i~~g~~~~~Lvv~~e~~S~~  146 (324)
                      |++|.++.+|+++.|.+|+.
T Consensus        98 I~sG~~dvvla~GvEsmS~~  117 (386)
T cd00751          98 IAAGEADVVVAGGVESMSRA  117 (386)
T ss_pred             HCCCCCCEEEEECCCCCCCC
T ss_conf             10799778887244535657


No 30 
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2  has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.73  E-value=2.3e-16  Score=124.25  Aligned_cols=202  Identities=21%  Similarity=0.200  Sum_probs=142.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             89889999999999999974021235443366501223345898531001122026864444210122003467888998
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSY  126 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~l  126 (324)
                      .++.+..||+.+|++++|+++|++|++||.|++++..+.......+..++..+|+++..++.++.+|+|++.++..|...
T Consensus        11 ~~~~s~~eL~~~a~~~Al~dagi~~~~ID~v~~g~~~~~~~~~~~~~~~a~~~G~~~~~~~~v~~~c~Sg~~ai~~Aa~~   90 (375)
T cd00829          11 RSDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLLGKPATRVEAAGASGSAAVRAAAAA   90 (375)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCHHHHCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf             99969999999999999998391989949999991287553476999999982999986588689886999999999999


Q ss_pred             HHHCCCCCCEEEEECCCCCCCCCC----------C---------------------------------------------
Q ss_conf             964155653167630224322245----------6---------------------------------------------
Q gi|254780497|r  127 IRSGVVRRVMVIGSDTFSRIVDWS----------D---------------------------------------------  151 (324)
Q Consensus       127 i~~g~~~~~Lvv~~e~~S~~~d~~----------d---------------------------------------------  151 (324)
                      |++|..+.+|++++|.+|..-.+.          +                                             
T Consensus        91 I~~G~~~~vl~~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g~~re~~~~~a~~~~~~A~  170 (375)
T cd00829          91 IASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGTTREDLAKVAVKNHRNAA  170 (375)
T ss_pred             HHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             97799998999987516778765554445677203332024466578999999999999979799999999999998644


Q ss_pred             --CC-------------------------CCCCCCCCCCEEEEECCCCCCCCCCCCC--CEEEEEECCCCCCCCEEECCC
Q ss_conf             --63-------------------------2323454431234402654465434454--101232035555561775487
Q gi|254780497|r  152 --RS-------------------------TCVLFGDGAGALILEGVEVKGSSMADTG--ILSTYLCSDGSYIDKLYVDGG  202 (324)
Q Consensus       152 --~~-------------------------~~~lfGDGAaA~ll~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  202 (324)
                        +.                         .+..+.|||+|+||.+.+..... ....  +.......+..+     ..  
T Consensus       171 ~np~A~~~~~~t~e~~~~~~~i~~Pl~~~~~~~~~DGAaa~vl~s~~~A~~~-~~~p~~i~g~~~~~~~~~-----~~--  242 (375)
T cd00829         171 RNPYAQFRKPITVEDVLNSRMIADPLRLLDCCPVSDGAAAVVLASEERAREL-TDRPVWILGVGAASDTPS-----LS--  242 (375)
T ss_pred             CCCCCCCCCCCCHHHHHCCCCCCCCCCHHHCCCCCCCCEEEEEECHHHHHHC-CCCCEEEEEEEEEECCCC-----CC--
T ss_conf             2861202588589998234764466214315766664058999639999876-999379999999952654-----35--


Q ss_pred             CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH
Q ss_conf             65444332001032024445577777778888987400100012102444441589999997197876
Q gi|254780497|r  203 PSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD  270 (324)
Q Consensus       203 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e  270 (324)
                        ..  ..          ..........++++|+++|++++|||.|=+|-.-....-...+.|||.++
T Consensus       243 --~~--~~----------~~~~~~~~~A~~~al~~aGl~~~DiD~~Ei~eaFa~~~l~~~e~lGl~~~  296 (375)
T cd00829         243 --ER--DD----------FLSLDAARLAARRAYKMAGITPDDIDVAELYDCFTIAELLALEDLGFCEK  296 (375)
T ss_pred             --CC--CC----------CCCCHHHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCCC
T ss_conf             --67--85----------22232599999999998199978765642015766999999998099977


No 31 
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.72  E-value=1.3e-15  Score=119.31  Aligned_cols=298  Identities=20%  Similarity=0.269  Sum_probs=167.7

Q ss_pred             CEEEEEEEEEECCCCEECHHHHHH-HHCCCHH--HHH--HCCCCCEEE---EE--CCC-----------CCHHHHHHHHH
Q ss_conf             226999999964984117889998-8099987--811--024751889---82--898-----------89999999999
Q gi|254780497|r    2 IRSTVRGIGLSLPRRVLSNSDLES-IVDTSDG--WIK--RRVGISRRH---IA--GKD-----------ETTASLGEAAA   60 (324)
Q Consensus         2 ~~~~I~~~g~ylP~~~v~~~el~~-~~~~~~~--~i~--~~~GI~~R~---~~--~~~-----------e~~~~la~~Aa   60 (324)
                      .+|.|+|+|...|.-. +.+++-+ ...-...  .+.  .......+.   +.  +++           ....-|+.+++
T Consensus         2 rRVvItG~g~v~P~g~-~~e~fw~~L~~G~s~i~~~~~~d~~~~~~~~~g~i~~f~~~~~i~~~~~r~~d~~~~~~l~aa   80 (411)
T PRK07314          2 RRVVVTGLGAVSPLGN-DVESTWKNLLAGKSGIGPITKFDTSDLAVKIAGEVKDFNPDDYMSRKEARRMDRFIQYGIAAA   80 (411)
T ss_pred             CCEEEECCEEECCCCC-CHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHCCHHHHHHHHHH
T ss_conf             9699981678898989-999999999809983654786665468763667818989577589999985599999999999


Q ss_pred             HHHHHHHCCCCCCCC----EEEEECCCC-----------------C----CCCCC-----CCCCHHHHHHCCCCCCCCCC
Q ss_conf             999974021235443----366501223-----------------3----45898-----53100112202686444421
Q gi|254780497|r   61 RDALHHAEMSVDDID----LIIVATSTP-----------------D----QTFPS-----TAVNIQNRLGMKRGFAFDMQ  110 (324)
Q Consensus        61 ~~al~~a~~~~~~Id----~ii~~s~~~-----------------~----~~~p~-----~a~~i~~~LGl~~~~~~di~  110 (324)
                      ++||+++|+++++++    .|+++|...                 .    +..|.     .+++|...+|++ .+++-++
T Consensus        81 ~~Al~dAGl~~~~~~~~r~gv~vGt~~g~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l~-Gp~~tv~  159 (411)
T PRK07314         81 KQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLHEKGPRRVSPFFVPMAIINMAAGHVSIRYGAK-GPNHSIV  159 (411)
T ss_pred             HHHHHHCCCCHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCC
T ss_conf             999997399946808655689981477625769999999984495545852025665028999999983999-9731111


Q ss_pred             CCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC-CCC---------------------CCCCCC-CCCCCCCCCCCEEEE
Q ss_conf             012200346788899896415565316763022-432---------------------224566-323234544312344
Q gi|254780497|r  111 AVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF-SRI---------------------VDWSDR-STCVLFGDGAGALIL  167 (324)
Q Consensus       111 ~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~-S~~---------------------~d~~d~-~~~~lfGDGAaA~ll  167 (324)
                      .+|+|++.||..|..+|++|..+.+||.++|.. ++.                     ..+.|. ...+++|+||+++||
T Consensus       160 ~aCsSsl~Al~~A~~~i~~G~~d~aivgg~~~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~adG~v~gEGa~~vvL  239 (411)
T PRK07314        160 TACATGAHAIGDAARLIQYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRDGFVMGEGAGILVL  239 (411)
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf             40137999999999999859977654145245678899999999888740789987777732137997322561478852


Q ss_pred             ECCCCCCCCCCC--CCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             026544654344--541012320355555617754876544433200103202444557777777888898740010001
Q gi|254780497|r  168 EGVEVKGSSMAD--TGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENI  245 (324)
Q Consensus       168 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~di  245 (324)
                      ++.+........  ..+.+....+|+..          ...     ...++        ....+.++++|+++|++++||
T Consensus       240 e~~~~A~~~g~~i~a~i~G~~~~~d~~~----------~~~-----p~~~~--------~g~~~a~~~al~~agi~~~~i  296 (411)
T PRK07314        240 EELEHAKARGAKIYAEVVGYGMTGDAYH----------MTA-----PAPDG--------EGAARAMVAALKDAGINPEDI  296 (411)
T ss_pred             CCHHHHHHCCCCEEEEEEEEEECCCCCC----------CCC-----CCCCC--------HHHHHHHHHHHHHHCCCCCCE
T ss_conf             6599998779946899831376479988----------878-----89860--------567889999999858996332


Q ss_pred             CCCCCCCCCHH-----HHHHHHHHCCCCHHHHH-H-HHHHHCCCHHHHHHHHHHH---HHHCCCCC--------------
Q ss_conf             21024444415-----89999997197876733-6-5865193301269999999---99806889--------------
Q gi|254780497|r  246 DWFVPHQANWR-----IINSIVDKMKIPFDKVI-V-TVDIHGNTSAASIPLALAV---AVKEGRVK--------------  301 (324)
Q Consensus       246 d~~~~Hq~~~~-----~~~~~~~~lgl~~e~~~-~-~~~~~Gn~~sas~~~~L~~---~~~~g~l~--------------  301 (324)
                      |++-.|-.+-.     =.+.+.+.++=...++. . +=..+||+.+++=.+.+-.   +++.+.+.              
T Consensus       297 ~yIe~hgtgt~~~D~~E~~al~~~f~~~~~~~~i~S~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~p~~~~~~  376 (411)
T PRK07314        297 DYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFTVLAIRDQVIPPTINLDNPDEECDL  376 (411)
T ss_pred             EEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf             17997368787779889999999865558898764803310336888999999999999855952898899999988984


Q ss_pred             ----------CCCEEEEEEEC-CCCCEEEEEEEC
Q ss_conf             ----------99899999971-450145687869
Q gi|254780497|r  302 ----------KGDCLLLEAMG-GGFTSGTVLLRW  324 (324)
Q Consensus       302 ----------~Gd~vll~~~G-~G~s~~a~llrw  324 (324)
                                +.++.+.-+|| +|.....++=||
T Consensus       377 ~~v~~~~~~~~~~~al~~sfGfGG~N~~~vl~~y  410 (411)
T PRK07314        377 DYVPNEARERKIDYALSNSFGFGGTNASLVFKRY  410 (411)
T ss_pred             CCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEEC
T ss_conf             3288988678878999968358856689998404


No 32 
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.69  E-value=7e-15  Score=114.73  Aligned_cols=295  Identities=17%  Similarity=0.204  Sum_probs=170.6

Q ss_pred             CCEEEEEEEEEECCCCEECHHHHHHHH--CCCH----HH---------H----HHCCCCCEEEEECCC---------CCH
Q ss_conf             922699999996498411788999880--9998----78---------1----102475188982898---------899
Q gi|254780497|r    1 MIRSTVRGIGLSLPRRVLSNSDLESIV--DTSD----GW---------I----KRRVGISRRHIAGKD---------ETT   52 (324)
Q Consensus         1 M~~~~I~~~g~ylP~~~v~~~el~~~~--~~~~----~~---------i----~~~~GI~~R~~~~~~---------e~~   52 (324)
                      |++|.|+|+|...|--. +.+++-+.+  +.+.    .+         .    ....|-+...+..++         ...
T Consensus         6 m~rVvITGiG~vtp~G~-~~~e~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~   84 (415)
T PRK07103          6 MDEVVVTGVGVVSAIGQ-GRQPFAAALLAGRHAFGVMRRPGRQLPDDPGAGPAPAFFGAEIDSLALPPMLDAHRRRASYS   84 (415)
T ss_pred             CCEEEEECCEEECCCCC-CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHH
T ss_conf             97199988863788838-99999999975998656566566646687433344565564356666300288998755299


Q ss_pred             HHHHHHHHHHHHHHHCCCC---CCCCEEEEECCCC---------------CCCCC---------CCCCCHHHHHHCCCCC
Q ss_conf             9999999999997402123---5443366501223---------------34589---------8531001122026864
Q gi|254780497|r   53 ASLGEAAARDALHHAEMSV---DDIDLIIVATSTP---------------DQTFP---------STAVNIQNRLGMKRGF  105 (324)
Q Consensus        53 ~~la~~Aa~~al~~a~~~~---~~Id~ii~~s~~~---------------~~~~p---------~~a~~i~~~LGl~~~~  105 (324)
                      ..++..|++++++++++++   ..+.+++-++...               .+.-|         ..+.+|+..+|++ .+
T Consensus        85 ~~~a~~a~~~Al~dagl~~~~~~r~G~~vg~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~gl~-Gp  163 (415)
T PRK07103         85 AQAALAAVREAWDDAALGDVDPLRIGLVVGGSNVQQRELALVHDAYRERPAFLRPSYGLSFMDSDLCGLCTEQFGIR-GV  163 (415)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-CC
T ss_conf             99999999999996799977877528999967465899999999855699813765888751058999999996899-97


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC-CC-----------------------CCCCCCC-CCCCCCCC
Q ss_conf             44421012200346788899896415565316763022-43-----------------------2224566-32323454
Q gi|254780497|r  106 AFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF-SR-----------------------IVDWSDR-STCVLFGD  160 (324)
Q Consensus       106 ~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~-S~-----------------------~~d~~d~-~~~~lfGD  160 (324)
                      ++.++++|++++.||..|.++|+.|.++.+++++++.. +.                       ...+.|+ ...+++|+
T Consensus       164 ~~tv~tACaSg~~Ai~~A~~~Ir~G~~D~ai~gG~~~~ls~~~~~~f~~lgals~~~~~~~P~~~~rPFD~~rdG~v~GE  243 (415)
T PRK07103        164 AFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRDGFIYGE  243 (415)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECC
T ss_conf             20101532159999999999998399998884263222056889999986776314467898766660105899643527


Q ss_pred             CCCEEEEECCCCCCCCCCC--CCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             4312344026544654344--54101232035555561775487654443320010320244455777777788889874
Q gi|254780497|r  161 GAGALILEGVEVKGSSMAD--TGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDST  238 (324)
Q Consensus       161 GAaA~ll~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~  238 (324)
                      ||+++|||+.+........  ..+.+.-..+|+..          ..       ..+        .......++++|+++
T Consensus       244 Ga~~lvLE~~e~A~~RGa~i~a~i~G~g~~~Da~~----------~~-------~p~--------~~g~~~am~~Al~~A  298 (415)
T PRK07103        244 ACGAIVVERAERARRRGVRPYAKLLGWSIRLDATR----------GP-------APS--------LDGEMAVIRGALRRA  298 (415)
T ss_pred             CEEEEEEHHHHHHHHCCCEEEEEEEEEEECCCCCC----------CC-------CCC--------HHHHHHHHHHHHHHC
T ss_conf             64776331166687679958899831045147878----------88-------997--------799999999999982


Q ss_pred             HCCCCCCCCCCCCCCCHHH-----HHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHH---HHHCCCCCC--------
Q ss_conf             0010001210244444158-----999999719787673365865193301269999999---998068899--------
Q gi|254780497|r  239 HLTIENIDWFVPHQANWRI-----INSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAV---AVKEGRVKK--------  302 (324)
Q Consensus       239 gl~~~did~~~~Hq~~~~~-----~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~---~~~~g~l~~--------  302 (324)
                      +++++|||++..|-.+-..     .+.+.+.++=. -.+.++=..+||+..++=.+.+-.   +++++.+.|        
T Consensus       299 gl~~~~IdyI~aHgTgT~~~D~~E~~Al~~~fg~~-~~v~S~Ks~~GH~lgAaGa~e~i~~~lal~~~~ipPt~n~~~p~  377 (415)
T PRK07103        299 GLGPADIDYVNPHGTGSVLGDATELDALRASGLAH-ARINTTKSLVGHGLSAAGIVELIATLLQMRAGRLHPSRNLDEPI  377 (415)
T ss_pred             CCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCC-CCEECCCHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             97812307798148767676999999999970899-86758644320357999999999999998439508999989989


Q ss_pred             ---------------CCEEEEEEECCCCCEEEEEEE
Q ss_conf             ---------------989999997145014568786
Q gi|254780497|r  303 ---------------GDCLLLEAMGGGFTSGTVLLR  323 (324)
Q Consensus       303 ---------------Gd~vll~~~G~G~s~~a~llr  323 (324)
                                     -+.+|--+||=|=+-.+++||
T Consensus       378 d~~l~~v~~~~~~~~~~~~l~nsfgFGG~Na~lvl~  413 (415)
T PRK07103        378 DPSFDWVRSTAGSHDIHRALSLSIGFGGINTALCLE  413 (415)
T ss_pred             CCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEE
T ss_conf             976586788773488889999602587417899997


No 33 
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=99.69  E-value=2e-14  Score=111.89  Aligned_cols=288  Identities=15%  Similarity=0.124  Sum_probs=169.9

Q ss_pred             CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf             92269999999649841178899988099987811024751889828988999999999999997402123544336650
Q gi|254780497|r    1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVA   80 (324)
Q Consensus         1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~   80 (324)
                      |.+|.|.|+|.. |-.+                            ..++.+..+|+.+|+++||+++|++++|||.++++
T Consensus         1 Mr~V~IvGvG~T-~f~k----------------------------~~~~~~~~~l~~eA~~~AL~DAGl~~~dIDg~v~~   51 (415)
T PRK06365          1 MRDVYMVAGGVT-KFVK----------------------------ASPNMDFRLRVKKAFDYAMNDAGLTLADIDGSVAS   51 (415)
T ss_pred             CCCEEEEEEECC-CCCC----------------------------CCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEE
T ss_conf             984899984236-4567----------------------------89998899999999999999759998996988898


Q ss_pred             CCCCCCCCC--CCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC----------
Q ss_conf             122334589--85310011220268644442101220034678889989641556531676302243222----------
Q gi|254780497|r   81 TSTPDQTFP--STAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVD----------  148 (324)
Q Consensus        81 s~~~~~~~p--~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d----------  148 (324)
                      .. ++....  .....+++.||+.+.++..+.++|+++..+++.|...|++|.++.+||++.|.++....          
T Consensus        52 ~~-~~~~~~~~~~g~~~~~~lGl~~~p~~~ve~~casg~~a~~~A~~~I~sG~~d~vlv~G~ek~s~~~~~~~~~~~~~~  130 (415)
T PRK06365         52 YF-SDHFQRQLMAGIMVQDYLGLVPKPSKRIEGGGATGGLAFQAGYEEIASGRMDVVAVYGFETMSHVNTWKGNEFIALA  130 (415)
T ss_pred             EC-CCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHCC
T ss_conf             41-78664210055899997188886425773772899999999999997087878999741145678866653111025


Q ss_pred             ----CCCCC--------------------------------------------------------C-----------CCC
Q ss_conf             ----45663--------------------------------------------------------2-----------323
Q gi|254780497|r  149 ----WSDRS--------------------------------------------------------T-----------CVL  157 (324)
Q Consensus       149 ----~~d~~--------------------------------------------------------~-----------~~l  157 (324)
                          |+.+.                                                        +           +..
T Consensus       131 ~d~~~e~p~g~~~~~~~Al~a~rym~~yG~t~e~lA~Vavk~r~~A~~NP~A~~~~~iTvedvl~s~~Ia~PL~lldcc~  210 (415)
T PRK06365        131 SDTNFDYPIGGFYTGYYAMMAVRHMYEFGTTVEQMAKVSVKNHGNAIHNPYAQSPMKLTVEDVRKAPMVSYPLTRLDVCA  210 (415)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHCCCCCCCCCHHHCCCC
T ss_conf             66553454555448899999999999869889999999999877552593764888899899831884436720212688


Q ss_pred             CCCCCCEEEEECCCCCCCCCCCCC--CEEEEEECCCCCC-CCEEECCC--CCCC-CCCCCHHHCCHHHHHHHHHHHHHHH
Q ss_conf             454431234402654465434454--1012320355555-61775487--6544-4332001032024445577777778
Q gi|254780497|r  158 FGDGAGALILEGVEVKGSSMADTG--ILSTYLCSDGSYI-DKLYVDGG--PSTS-RTVGCIRMEGKAVFKYAVEKAVELI  231 (324)
Q Consensus       158 fGDGAaA~ll~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~--~~~~-~~~~~~~~~g~~~~~~~~~~~~~~i  231 (324)
                      .+|||+|+||.+.+.... ..+..  +...-..++..+. +....+..  +... .....+..  ..+.  ..+......
T Consensus       211 ~sDGAaAvVl~see~Ar~-~~~~pV~I~g~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~Aa  285 (415)
T PRK06365        211 MSDGAAVAILASEDKAFE-ITDHPVLIKAIGTGTDTMRLADRPFGEVPLLPNENPSDYKNLKY--PGVH--SFRAGRMAA  285 (415)
T ss_pred             CCCCEEEEEEECHHHHHH-CCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCC--CCCC--CHHHHHHHH
T ss_conf             888649999945898865-57997799999971254200345444454444567201102345--5410--027999999


Q ss_pred             HHHHHHHHCCC--CCCCCCCCCCCCHHHHHHHHHHCCCCHH----HHH------------HH----HHHHCCCHHHHHHH
Q ss_conf             88898740010--0012102444441589999997197876----733------------65----86519330126999
Q gi|254780497|r  232 EKVFDSTHLTI--ENIDWFVPHQANWRIINSIVDKMKIPFD----KVI------------VT----VDIHGNTSAASIPL  289 (324)
Q Consensus       232 ~~~L~~~gl~~--~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~~------------~~----~~~~Gn~~sas~~~  289 (324)
                      +++++++|+++  +|||.+-+|-.--..--...|.||+-+.    +++            .|    +--.||...++-+.
T Consensus       286 ~~Ay~~AGi~~p~~DiDv~ev~D~Ft~~el~~lE~lGfc~~Geg~~~v~~G~~~~~G~lPvN~sGGlls~Ghp~GatG~~  365 (415)
T PRK06365        286 KEAYERANITDPLNDLDLIELHDAYTSSEIQTYEDLGLCKYGEGGQFIDEGKPELDGKIPVNPSGGLLAAGHPVGATGIM  365 (415)
T ss_pred             HHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHH
T ss_conf             99999749999614587799845762999999998499889838999977996689971267885233078656513999


Q ss_pred             HHHHHHHC--C-----------CCCCCCEEEEEEEC-CCCCEEEEEEE
Q ss_conf             99999980--6-----------88999899999971-45014568786
Q gi|254780497|r  290 ALAVAVKE--G-----------RVKKGDCLLLEAMG-GGFTSGTVLLR  323 (324)
Q Consensus       290 ~L~~~~~~--g-----------~l~~Gd~vll~~~G-~G~s~~a~llr  323 (324)
                      .+.++.++  |           +++.-...|.-+.| .|-+....+||
T Consensus       366 q~vE~~~QLrG~a~~r~~~~~~QV~~a~~al~~~~GG~~~~~~v~il~  413 (415)
T PRK06365        366 QAVFMFWQLQHTIKKHFHDDYLQVPNAKRGLIHSHAGTGTYVTVTIME  413 (415)
T ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEE
T ss_conf             999999996175023677754568985689883577554017999993


No 34 
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=99.69  E-value=7.6e-15  Score=114.49  Aligned_cols=270  Identities=20%  Similarity=0.230  Sum_probs=155.0

Q ss_pred             CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf             92269999999649841178899988099987811024751889828988999999999999997402123544336650
Q gi|254780497|r    1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVA   80 (324)
Q Consensus         1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~   80 (324)
                      |++|.|.|++- .|-.+                             .++.+..+|+++|+++||+++|++|+|||-|+++
T Consensus         1 M~~vaIVG~g~-Tp~gr-----------------------------~~~~s~~~L~~~A~~~Al~dAgl~~~dID~v~~G   50 (389)
T PRK07516          1 MMTASIVGWAH-TPFGK-----------------------------LDAETLESLIVRVAREALADAGIAAGDVDGIFLG   50 (389)
T ss_pred             CCCEEEEEEEE-CCCCC-----------------------------CCCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEE
T ss_conf             98389998203-35500-----------------------------6998999999999999999969098993999998


Q ss_pred             CCCCCCCCCC--CCCCHH-HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC---------
Q ss_conf             1223345898--531001-1220268644442101220034678889989641556531676302243222---------
Q gi|254780497|r   81 TSTPDQTFPS--TAVNIQ-NRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVD---------  148 (324)
Q Consensus        81 s~~~~~~~p~--~a~~i~-~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d---------  148 (324)
                      +..... .|.  .+..+. ...++...++..++.+|+|++.++..|...|++|.++.+|+++.|.+|+.-.         
T Consensus        51 ~~~~g~-~~~~~~~~~~~~~~~~l~~~p~~~v~~~caSG~~ai~~Aa~~I~sG~~dvvl~~G~e~ms~~p~~~~~~~~~~  129 (389)
T PRK07516         51 HFNAGF-SPQDFTASLVLQADPALRFKPATRVENACATGSAAVYAAIDAIESGRARIVLVVGAEKMTATPGAEVGRILLG  129 (389)
T ss_pred             ECCCCC-CCCHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHCCC
T ss_conf             247444-6432999999973675568755998787679999999999999759888999998710467982023122036


Q ss_pred             --CCCCC-------------------------------------------------------------------------
Q ss_conf             --45663-------------------------------------------------------------------------
Q gi|254780497|r  149 --WSDRS-------------------------------------------------------------------------  153 (324)
Q Consensus       149 --~~d~~-------------------------------------------------------------------------  153 (324)
                        +....                                                                         
T Consensus       130 ~~~~~~~~~~~~~~~~~~a~~a~~~~~~~g~~~e~~a~va~~~~~~a~~np~A~~~~~~~~e~~~~~~~~~p~i~~pl~~  209 (389)
T PRK07516        130 ASYRKEEGDTPGGFAGVFGRIAQAYFQRYGDQSDALAMIAAKNHANGVANPYAQMRKDLGFEFCNTVSEKNPFVAGPLRR  209 (389)
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCEECCCCHH
T ss_conf             64454334455548999999999999997878999999999976513248753355788841344533357721366333


Q ss_pred             -CCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHH
Q ss_conf             -2323454431234402654465434454101232035555561775487654443320010320244455777777788
Q gi|254780497|r  154 -TCVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIE  232 (324)
Q Consensus       154 -~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~  232 (324)
                       .+....|||+|+||.+.+..........+......+     +..               .+..+...  ........++
T Consensus       210 ~d~s~~~DGAaAvvl~s~e~A~~l~~~v~i~~~a~~~-----~~~---------------~~~~~d~~--~~~gp~~A~~  267 (389)
T PRK07516        210 TDCSLVSDGAAALVLADAETARALQRAVRFRARAHVN-----DFL---------------PMSRRDPL--AFEGPRRAWQ  267 (389)
T ss_pred             HCCCCCCCCEEEEEECCHHHHHHCCCCCEEEEEEEEE-----CCC---------------CCCCCCCC--CCCCHHHHHH
T ss_conf             2288777840489982599997568981899999982-----464---------------55657842--3424899999


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH----HHHH------------H----HHHHCCCHHHHHHHHHH
Q ss_conf             88987400100012102444441589999997197876----7336------------5----86519330126999999
Q gi|254780497|r  233 KVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD----KVIV------------T----VDIHGNTSAASIPLALA  292 (324)
Q Consensus       233 ~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~~~------------~----~~~~Gn~~sas~~~~L~  292 (324)
                      ++|+++|++++|||.+-+|-+--...-.+.|.||+-++    +++.            |    .--+||-..++=...+.
T Consensus       268 ~al~~AGl~~~DiD~~Ei~daFa~~~l~~~E~lGl~~~Ge~~~~~~~g~~~~~G~~pvN~~GG~ls~Ghp~gatG~~~~~  347 (389)
T PRK07516        268 RALEQAGVTLDDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGRLPVNPSGGLKAKGHPIGATGVSMHV  347 (389)
T ss_pred             HHHHHCCCCHHHCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCEECCCHHHHHCCCCCCHHHHHHHH
T ss_conf             99998499888824454334337999999998499977725778765886679984371784187669810136999999


Q ss_pred             ---HHHHC----CCCCCCCEEEEEEECCC-CCEEEEEEE
Q ss_conf             ---99980----68899989999997145-014568786
Q gi|254780497|r  293 ---VAVKE----GRVKKGDCLLLEAMGGG-FTSGTVLLR  323 (324)
Q Consensus       293 ---~~~~~----g~l~~Gd~vll~~~G~G-~s~~a~llr  323 (324)
                         +-++-    .+++.-+..+..+.|.. .+...++|+
T Consensus       348 e~~~QLrg~ag~~QV~~a~~~l~~~~GG~~~~~~~~il~  386 (389)
T PRK07516        348 LAAMQLTGEAGGMQIPGAKLAGVFNMGGAAVANYVSILE  386 (389)
T ss_pred             HHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHEEEEEEE
T ss_conf             999996235367778987789995778676716899988


No 35 
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.68  E-value=1.2e-14  Score=113.23  Aligned_cols=288  Identities=22%  Similarity=0.319  Sum_probs=173.8

Q ss_pred             CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEE-EE-----------CCCCCHHHHHHHHHHHHHHHHC
Q ss_conf             92269999999649841178899988099987811024751889-82-----------8988999999999999997402
Q gi|254780497|r    1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRH-IA-----------GKDETTASLGEAAARDALHHAE   68 (324)
Q Consensus         1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~-~~-----------~~~e~~~~la~~Aa~~al~~a~   68 (324)
                      ||+|.|+|+|..-|--- ..+.|....       .-++||.... +.           .......++...|+.+|+++++
T Consensus         1 M~RVVITGiG~vSplG~-~~e~w~~L~-------~G~sgI~~~~~f~~~~~~~~~~~~~~~~~~~~l~~~a~~~Al~dAg   72 (379)
T PRK05952          1 MMKVVVTGIGLVSALGS-LEQSWQRLL-------QGKSGIKLHQPFPELPPLPLGLIGSQPISLEDLTQTTVTAALKDAG   72 (379)
T ss_pred             CCEEEEECCEEECCCCC-HHHHHHHHH-------CCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf             98799945110688888-599999997-------6898825677777777614200277856899999999999999779


Q ss_pred             CCCCCCCE-EEEECCCCC----------C----------------CCCC-CCCCHHHHHHCCCCCCCCCCCCCCCHHHHH
Q ss_conf             12354433-665012233----------4----------------5898-531001122026864444210122003467
Q gi|254780497|r   69 MSVDDIDL-IIVATSTPD----------Q----------------TFPS-TAVNIQNRLGMKRGFAFDMQAVCSGFVYAV  120 (324)
Q Consensus        69 ~~~~~Id~-ii~~s~~~~----------~----------------~~p~-~a~~i~~~LGl~~~~~~di~~~C~~~~~al  120 (324)
                      +++...+. +++++....          +                .+|. .+..++..+|++ .+++-++.+|++++.||
T Consensus        73 l~~~~~~~gv~~Gt~~g~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~ia~~~g~~-G~~~~~~~aCaS~~~Ai  151 (379)
T PRK05952         73 LTPPLTDCGVVIGSSRGFQGQWEKLARQIYVGDQSGDEAEENWLDTLPHQAAIATARQIGAQ-GPVLAPMAACATGIWAI  151 (379)
T ss_pred             CCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC-CCEECCCCHHHHHHHHH
T ss_conf             99975465899996752676899999875204788866721699985339999999983999-96204012747899999


Q ss_pred             HHHHHHHHHCCCCCCEEEEECC-CCCC---------------CCCCC-CCCCCCCCCCCCEEEEECCCCCCCCCCC--CC
Q ss_conf             8889989641556531676302-2432---------------22456-6323234544312344026544654344--54
Q gi|254780497|r  121 TTADSYIRSGVVRRVMVIGSDT-FSRI---------------VDWSD-RSTCVLFGDGAGALILEGVEVKGSSMAD--TG  181 (324)
Q Consensus       121 ~~A~~li~~g~~~~~Lvv~~e~-~S~~---------------~d~~d-~~~~~lfGDGAaA~ll~~~~~~~~~~~~--~~  181 (324)
                      ..|.++|++|+.+.+++.++|. .++.               ..+.| ....+++|+||++++||+.+........  ..
T Consensus       152 ~~A~~~I~~G~~d~~i~gg~~~~~~~~~~~~f~~~~~ls~~~~rPFd~~r~G~v~gEGa~~lvLE~~~~A~~rga~iya~  231 (379)
T PRK05952        152 AQGAELIQTGQCQRVIAGAVESPITPLTLAGFQKMGALAKTGAYPFDRQREGLVLGEGGAILVLESEELAQKRGAKIYGQ  231 (379)
T ss_pred             HHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCHHHHHHCCCCEEEE
T ss_conf             99999998399887986787652482768999865783446767454689960258750467645599998789956899


Q ss_pred             CEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH----
Q ss_conf             1012320355555617754876544433200103202444557777777888898740010001210244444158----
Q gi|254780497|r  182 ILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRI----  257 (324)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~----  257 (324)
                      +...-...|+...               .....++        ....+.++++|++++++++||||+..|-.+-..    
T Consensus       232 i~g~~~~~d~~~~---------------~~~~~~g--------~~~~~am~~al~~agi~~~~Idyi~aHgtgT~~~D~~  288 (379)
T PRK05952        232 ILGFGLTCDAYHM---------------SAPEPSG--------KSAILAIQQCLARSGLTPEDIDYIHAHGTATRLNDQR  288 (379)
T ss_pred             EECCEECCCCCCC---------------CCCCCCH--------HHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHH
T ss_conf             9352553689888---------------7889898--------9999999999998499833352899467878776999


Q ss_pred             -HHHHHHHCCCCHHHH-HH-HHHHHCCCHHHHHHHHHHH---HHHCCCCC---------------------CCCEEEEEE
Q ss_conf             -999999719787673-36-5865193301269999999---99806889---------------------998999999
Q gi|254780497|r  258 -INSIVDKMKIPFDKV-IV-TVDIHGNTSAASIPLALAV---AVKEGRVK---------------------KGDCLLLEA  310 (324)
Q Consensus       258 -~~~~~~~lgl~~e~~-~~-~~~~~Gn~~sas~~~~L~~---~~~~g~l~---------------------~Gd~vll~~  310 (324)
                       .+.+.+.++   ++. +. +=..+||+..++=.+.+..   +++++.+.                     +-+++|--+
T Consensus       289 E~~ai~~vfg---~~~~v~s~Ks~~GH~~~aaG~~e~~~~~l~l~~~~ippt~n~~~p~~~l~~v~~~~~~~~~~aL~ns  365 (379)
T PRK05952        289 EANLIQTLFP---HRVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEFDLNFVRQARQSPLKNVLCLS  365 (379)
T ss_pred             HHHHHHHHHC---CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf             9999999718---7788778743324532777999999999999539718988999999899877876337888999962


Q ss_pred             ECCCCCEEEEEEE
Q ss_conf             7145014568786
Q gi|254780497|r  311 MGGGFTSGTVLLR  323 (324)
Q Consensus       311 ~G~G~s~~a~llr  323 (324)
                      ||=|=+-.++++|
T Consensus       366 fgfGG~Na~lvl~  378 (379)
T PRK05952        366 FGFGGQNAAIALG  378 (379)
T ss_pred             ECCCCEEEEEEEE
T ss_conf             2587368999996


No 36 
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.68  E-value=3.3e-15  Score=116.78  Aligned_cols=273  Identities=22%  Similarity=0.313  Sum_probs=158.2

Q ss_pred             CEEEEEEEEEECCCCEECHHHHHHHH-CCCHHHHHH-----CCCCCEEEEE--C---------CC-----CCHHHHHHHH
Q ss_conf             22699999996498411788999880-999878110-----2475188982--8---------98-----8999999999
Q gi|254780497|r    2 IRSTVRGIGLSLPRRVLSNSDLESIV-DTSDGWIKR-----RVGISRRHIA--G---------KD-----ETTASLGEAA   59 (324)
Q Consensus         2 ~~~~I~~~g~ylP~~~v~~~el~~~~-~~~~~~i~~-----~~GI~~R~~~--~---------~~-----e~~~~la~~A   59 (324)
                      ++|.|+|+|+.+|.-. +.+++-+.+ .-... |..     ..+...+.-.  +         +.     ....-|+.++
T Consensus         1 ~rIaItG~g~~~P~g~-~~~~fw~~L~~g~s~-i~~~~~~~~~~~~~~~~g~i~~~~~~~~i~~~~~~~~dp~~rl~l~a   78 (406)
T cd00834           1 RRVVITGLGAVTPLGN-GVEEFWEALLAGRSG-IRPITRFDASGFPSRIAGEVPDFDPEDYLDRKELRRMDRFAQFALAA   78 (406)
T ss_pred             CEEEEEECEEECCCCC-CHHHHHHHHHCCCCE-EECCCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHCCHHHHHHHHH
T ss_conf             9099995778897979-999999999749987-74488333425888553665888801158999998559999999999


Q ss_pred             HHHHHHHHCCCCCCCC----EEEEECCCCC---------------------CCCC-----CCCCCHHHHHHCCCCCCCCC
Q ss_conf             9999974021235443----3665012233---------------------4589-----85310011220268644442
Q gi|254780497|r   60 ARDALHHAEMSVDDID----LIIVATSTPD---------------------QTFP-----STAVNIQNRLGMKRGFAFDM  109 (324)
Q Consensus        60 a~~al~~a~~~~~~Id----~ii~~s~~~~---------------------~~~p-----~~a~~i~~~LGl~~~~~~di  109 (324)
                      +.+||+++|+++++++    -|+++++.++                     +..|     ..+.+|...+|++ .+++.+
T Consensus        79 a~~Al~dAgl~~~~~~~~~~gV~vGs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~-Gp~~tv  157 (406)
T cd00834          79 AEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLR-GPNYTV  157 (406)
T ss_pred             HHHHHHHCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHCCC-CCCEEE
T ss_conf             9999997599823448664479994377737779999999985586656811210113128999999984999-974203


Q ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCC-CC----------C-----------CCCC-CCCCCCCCCCCCEEE
Q ss_conf             10122003467888998964155653167630224-32----------2-----------2456-632323454431234
Q gi|254780497|r  110 QAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFS-RI----------V-----------DWSD-RSTCVLFGDGAGALI  166 (324)
Q Consensus       110 ~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S-~~----------~-----------d~~d-~~~~~lfGDGAaA~l  166 (324)
                      ..+|+|++.||..|+.+|++|+++.+||.++|... +.          +           .+.| ....+.+|+|+++++
T Consensus       158 ~taCsSsl~Al~~A~~~L~~G~~d~aivgg~~~~~~~~~~~~f~~~~~Ls~~~~~p~~~~rpFD~~adG~v~gEGa~~~v  237 (406)
T cd00834         158 STACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDRDGFVLGEGAGVLV  237 (406)
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCEEEEE
T ss_conf             34416767889999999977954202110024127868999999888873389987666565556788400128655885


Q ss_pred             EECCCCCCCCCC--CCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             402654465434--454101232035555561775487654443320010320244455777777788889874001000
Q gi|254780497|r  167 LEGVEVKGSSMA--DTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIEN  244 (324)
Q Consensus       167 l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~d  244 (324)
                      |++.+.......  ...+.+....+|+...               .....++        ....+.++++|+++|++++|
T Consensus       238 L~~~~~A~~~g~~i~a~I~g~~~~~dg~~~---------------~~~~p~~--------~~~~~~i~~al~~agi~~~~  294 (406)
T cd00834         238 LESLEHAKARGAKIYAEILGYGASSDAYHI---------------TAPDPDG--------EGAARAMRAALADAGLSPED  294 (406)
T ss_pred             CCCHHHHHHCCCCEEEEEEEEEEECCCCCC---------------CCCCCCH--------HHHHHHHHHHHHHHCCCCCC
T ss_conf             145999986799168999889993799888---------------8889898--------99999999999985899744


Q ss_pred             CCCCCCCCCCHHH-----HHHHHHHCCCCHHHHH--HHHHHHCCCHHHHHHHHHHH---HHHCCCC
Q ss_conf             1210244444158-----9999997197876733--65865193301269999999---9980688
Q gi|254780497|r  245 IDWFVPHQANWRI-----INSIVDKMKIPFDKVI--VTVDIHGNTSAASIPLALAV---AVKEGRV  300 (324)
Q Consensus       245 id~~~~Hq~~~~~-----~~~~~~~lgl~~e~~~--~~~~~~Gn~~sas~~~~L~~---~~~~g~l  300 (324)
                      ||++-.|-.+-..     .+.+.+.++=..++.+  .+=..+||+.+++=++.|-.   +++++.+
T Consensus       295 I~yIe~HgtGt~~gD~~E~~ai~~~f~~~~~~~~i~s~K~~iGH~~~asG~~~li~~~~~l~~~~i  360 (406)
T cd00834         295 IDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVL  360 (406)
T ss_pred             CCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEECCHHHHCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf             528997048786779999999999855678986688821100118899999999999999855965


No 37 
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.68  E-value=7.9e-15  Score=114.39  Aligned_cols=255  Identities=18%  Similarity=0.227  Sum_probs=155.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             98899999999999999740212354433665012233458985310011220268644442101220034678889989
Q gi|254780497|r   48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYI  127 (324)
Q Consensus        48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li  127 (324)
                      ++.+..+|+.+|+++||+++|++|+|||.+++++.......-..+..+++.+|+.....+.++.+|+++..++..|...|
T Consensus        17 ~~~s~~eL~~eA~~~Al~dAgl~~~dVD~v~~G~~~~~g~~~~~~~~~a~~~Gl~~~~~~~v~~~caSG~~av~~A~~~I   96 (385)
T PRK12578         17 DDVSIQELAWESIKEALEDAGITQKDVDLVVIGSTAYRGVELYPAPPVSEYSGLTGKVPLRVEAACATGSAAAFTAYTSI   96 (385)
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHH
T ss_conf             99799999999999999984929899599999456755522362899999759989886688166778999999999999


Q ss_pred             HHCCCCCCEEEEECCCCCCC------------C--CCCCC----------------------------------------
Q ss_conf             64155653167630224322------------2--45663----------------------------------------
Q gi|254780497|r  128 RSGVVRRVMVIGSDTFSRIV------------D--WSDRS----------------------------------------  153 (324)
Q Consensus       128 ~~g~~~~~Lvv~~e~~S~~~------------d--~~d~~----------------------------------------  153 (324)
                      ++|.++.+|+++.|.+|+.-            +  |+.+.                                        
T Consensus        97 ~sG~~dvvl~~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~~al~a~~ym~~yg~~~e~la~vav~~~~~A~~  176 (385)
T PRK12578         97 ASGLADIAMAVGVDKMTEVDTSTSLAIGGRGGNYQWEFHMYGTTFPTYYALYATRHMAVFGTTEEQMALVSVKAHKYASM  176 (385)
T ss_pred             HHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
T ss_conf             83859999994552057788643201145556532000234665279999999999999696999999999984487656


Q ss_pred             ----------------------------CCCCCCCCCCEEEEECCCCCCCCCCCCC--CEEEEEECCCCCCCCEEECCCC
Q ss_conf             ----------------------------2323454431234402654465434454--1012320355555617754876
Q gi|254780497|r  154 ----------------------------TCVLFGDGAGALILEGVEVKGSSMADTG--ILSTYLCSDGSYIDKLYVDGGP  203 (324)
Q Consensus       154 ----------------------------~~~lfGDGAaA~ll~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  203 (324)
                                                  .+....|||+|+||.+.+.......+..  +...-..++..+     ...  
T Consensus       177 np~A~~~~~~t~edvl~s~~i~~Pl~~~dc~~~sDGAaAvvl~s~e~ar~lg~~~pv~I~g~g~~~~~~~-----~~~--  249 (385)
T PRK12578        177 NPKAHFQKPVTVEDVLKSRVISWPIKLLDSSPISDGSATAIFASEEKVRELKIDTPVWIDGIGYASDTSY-----IAR--  249 (385)
T ss_pred             CCCCCCCCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCEEEEECCHHHHHHCCCCCCEEEEEEEECCCCCC-----CCC--
T ss_conf             9632146877888973157655774276404667984679971699998549998679998985256644-----223--


Q ss_pred             CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH----H--------
Q ss_conf             5444332001032024445577777778888987400100012102444441589999997197876----7--------
Q gi|254780497|r  204 STSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD----K--------  271 (324)
Q Consensus       204 ~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e----~--------  271 (324)
                       . .  ...          .........+++++++|++++|||.+-+|-.-...--...|.||+-+.    +        
T Consensus       250 -~-~--~~~----------~~~~~~~A~~~a~~~AGl~~~DiDv~ei~D~Ft~~~l~~~E~lG~~~~Ge~~~~~~~g~~~  315 (385)
T PRK12578        250 -R-G--EWV----------GLKATRLAAEMAYKMAKISPNDIEYATVHDCFTIAEIMAYEDLGFVEKGKGGKLLEEGQTE  315 (385)
T ss_pred             -C-C--CCC----------CCHHHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCC
T ss_conf             -5-6--544----------5638999999999871998665866520354278899999985999888379998678745


Q ss_pred             ----HHHH----HHHHCCCHHHHHHHHHHHHHHC-------CCCCCCC-EEEEEEEC-CCCCEEEEEEE
Q ss_conf             ----3365----8651933012699999999980-------6889998-99999971-45014568786
Q gi|254780497|r  272 ----VIVT----VDIHGNTSAASIPLALAVAVKE-------GRVKKGD-CLLLEAMG-GGFTSGTVLLR  323 (324)
Q Consensus       272 ----~~~~----~~~~Gn~~sas~~~~L~~~~~~-------g~l~~Gd-~vll~~~G-~G~s~~a~llr  323 (324)
                          .+.|    +--+||-..++-...+.++..+       .+++... ..|.-+.| .|-....++||
T Consensus       316 ~~G~~pvN~~GG~ls~Ghp~gatG~~~v~E~v~QLrG~ag~~Qv~~~~~~al~~~~GG~~~~~~v~vL~  384 (385)
T PRK12578        316 KGGKVAVNLFGGLKAKGHPLGATGLSMIYEITKQLREEAGPLQQPLKNYVALTHNVGGTGHYAYVMILR  384 (385)
T ss_pred             CCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHEEEEEEE
T ss_conf             699851528830764798455289999999999960243566478876689995367620306999995


No 38 
>PRK06059 lipid-transfer protein; Provisional
Probab=99.68  E-value=8e-15  Score=114.36  Aligned_cols=263  Identities=17%  Similarity=0.229  Sum_probs=156.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC--CCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             889999999999999974021235443366501223345898--531001122026864444210122003467888998
Q gi|254780497|r   49 DETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPS--TAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSY  126 (324)
Q Consensus        49 ~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~--~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~l  126 (324)
                      +.+..+|+++|+++||+++|++++|||.+++++..+.. .|.  ....+++.||+...+...+..+|+++..++..|...
T Consensus        20 ~r~~~~l~~eA~~~AL~DAGl~~~dVD~v~~~~~~~~~-~~~~~~~~~~a~~lGl~g~p~~~v~~~~asG~~a~~~A~~~   98 (399)
T PRK06059         20 GRDFTEYGVVAARAALADAGLDWRQVQLVAGADTIRNG-YPGFVAGATFAQKLGWNGVPVTSSYAACASGSQALQSARAQ   98 (399)
T ss_pred             CCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCC-CCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             97989999999999998559998994688430345667-77532269999975998863112116248999999999999


Q ss_pred             HHHCCCCCCEEEEECCCCCCC------------CCC--------------------------------------------
Q ss_conf             964155653167630224322------------245--------------------------------------------
Q gi|254780497|r  127 IRSGVVRRVMVIGSDTFSRIV------------DWS--------------------------------------------  150 (324)
Q Consensus       127 i~~g~~~~~Lvv~~e~~S~~~------------d~~--------------------------------------------  150 (324)
                      |++|.++.+||+++|......            +|.                                            
T Consensus        99 I~sG~~d~vlvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~Al~a~rym~~yG~t~e~lA~vavk~~~~a~~  178 (399)
T PRK06059         99 ILAGFCDVALVIGADTTPKGFFAPVGGERKNDPDWQRFHLIGATNTVYFALLARRRMDLYGATVEDFAQVKVKNARHGLD  178 (399)
T ss_pred             HHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf             98499878999403357876544554556677114443014785088999999999999797999999999999987710


Q ss_pred             CCC-------------------------CCCCCCCCCCEEEEECCCCCCCCCC---C-CCCEEEEEECCCCCCCCEEECC
Q ss_conf             663-------------------------2323454431234402654465434---4-5410123203555556177548
Q gi|254780497|r  151 DRS-------------------------TCVLFGDGAGALILEGVEVKGSSMA---D-TGILSTYLCSDGSYIDKLYVDG  201 (324)
Q Consensus       151 d~~-------------------------~~~lfGDGAaA~ll~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~  201 (324)
                      +|.                         -+...+|||+|+||.+.+.......   . ..+......+ ..+...     
T Consensus       179 NP~A~~r~~it~edvl~s~~Ia~PL~l~dc~~~sDGAaAvVl~s~e~A~~~~~~~~~~~~i~~~~~~~-~~~~~~-----  252 (399)
T PRK06059        179 NPNARYRKEVSVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFAEKHLGSVAGVPSVRAISTVT-PQYPQH-----  252 (399)
T ss_pred             CCHHHCCCCCCHHHHCCCCHHHHCCCCCCCCCCCCCEEEEEEECHHHHHHHCCCCCCCEEEEEEEEEC-CCCCCC-----
T ss_conf             92866689988788723826452615513178888508999955999987223567883999998405-754433-----


Q ss_pred             CCCCCCCCCCHHHCCHHHHHHHHHHH-HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH----HHH---
Q ss_conf             76544433200103202444557777-7778888987400100012102444441589999997197876----733---
Q gi|254780497|r  202 GPSTSRTVGCIRMEGKAVFKYAVEKA-VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD----KVI---  273 (324)
Q Consensus       202 ~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~~---  273 (324)
                          ......+..+.........+.. ....+.+++++|++|+|||.+-+|-.--.+--...|.||+-+.    +++   
T Consensus       253 ----~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ay~~AGi~p~DiDvae~yD~ft~~~l~~lE~lGf~~~Ge~~~~v~~G  328 (399)
T PRK06059        253 ----LPELPDIATDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSG  328 (399)
T ss_pred             ----CCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHCC
T ss_conf             ----3233321222101023315567899999999982999788727753166609899999984997898379999779


Q ss_pred             ---------HH----HHHHCCCHHHHHHHHHHHHHHC--CCC----CCCCEEEEEEECCCCCE-EEEEE
Q ss_conf             ---------65----8651933012699999999980--688----99989999997145014-56878
Q gi|254780497|r  274 ---------VT----VDIHGNTSAASIPLALAVAVKE--GRV----KKGDCLLLEAMGGGFTS-GTVLL  322 (324)
Q Consensus       274 ---------~~----~~~~Gn~~sas~~~~L~~~~~~--g~l----~~Gd~vll~~~G~G~s~-~a~ll  322 (324)
                               .|    +--.||...++=...+.++.++  |+-    -+|-++-++.-+.|+.. +++++
T Consensus       329 ~~~~~G~lPvNtsGGlls~Ghp~gatG~~~~~E~~~QLrG~Ag~rQV~~a~~gl~~n~G~~~~~~~~~~  397 (399)
T PRK06059        329 ATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCELTWQLRGQATGRQVEGAKVGITANQGLFGHGSSVIV  397 (399)
T ss_pred             CCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEE
T ss_conf             966799703558860211899661579999999999974887677389861788747788777329998


No 39 
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.67  E-value=2.3e-14  Score=111.45  Aligned_cols=297  Identities=20%  Similarity=0.257  Sum_probs=169.9

Q ss_pred             CEEEEEEEEEECCCCEECHHHHHHHH--CC------CHHHH---HHCC-C-CCEEEE-----ECCC-----------CCH
Q ss_conf             22699999996498411788999880--99------98781---1024-7-518898-----2898-----------899
Q gi|254780497|r    2 IRSTVRGIGLSLPRRVLSNSDLESIV--DT------SDGWI---KRRV-G-ISRRHI-----AGKD-----------ETT   52 (324)
Q Consensus         2 ~~~~I~~~g~ylP~~~v~~~el~~~~--~~------~~~~i---~~~~-G-I~~R~~-----~~~~-----------e~~   52 (324)
                      .+|.|+|+|..+|.-. +.+++-+.+  +.      +....   ..+. | +.....     .+++           ...
T Consensus         4 ~rVaItGmg~~~P~g~-~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~   82 (424)
T PRK06333          4 KRIVVTGMGVVSPLGN-GVETFWQRLLAGQSGIRTLTDFPCGDLATKIGGWVPELAEDAEAGFDPDPYLDPKDQRKMDRF   82 (424)
T ss_pred             CCEEEECCEEECCCCC-CHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHCCCHHHHHHCCHH
T ss_conf             9899987687898989-999999999819985754896645478774232736744454346795664899999862999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCC-----CEEEEECCCCC-----------------CCCCC---------CCCCHHHHHHC
Q ss_conf             9999999999997402123544-----33665012233-----------------45898---------53100112202
Q gi|254780497|r   53 ASLGEAAARDALHHAEMSVDDI-----DLIIVATSTPD-----------------QTFPS---------TAVNIQNRLGM  101 (324)
Q Consensus        53 ~~la~~Aa~~al~~a~~~~~~I-----d~ii~~s~~~~-----------------~~~p~---------~a~~i~~~LGl  101 (324)
                      .-++.+|+.+||+++|++|+++     -.+++++....                 .+.|.         .+++|...+|+
T Consensus        83 ~~~~l~aa~eAl~dAG~~~~~~~~~~r~gvivgs~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~gl  162 (424)
T PRK06333         83 ITFAMAAAKEAIAQAGWDPDNLPDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYGF  162 (424)
T ss_pred             HHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf             99999999999997599824626776579999625685688999999997548654484034567766899999998199


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC-CC----------C------------CC-CCCCCCCCC
Q ss_conf             686444421012200346788899896415565316763022-43----------2------------22-456632323
Q gi|254780497|r  102 KRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF-SR----------I------------VD-WSDRSTCVL  157 (324)
Q Consensus       102 ~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~-S~----------~------------~d-~~d~~~~~l  157 (324)
                      + .+++.+..+|+|++.||..|+.+|+.|+.+.+|+.++|.. +.          .            .. |+.....+.
T Consensus       163 ~-Gp~~tv~tACsSsl~Ai~~A~~~i~~G~~d~aivGg~~~~l~~~~~~~f~~~~~Ls~~~~~~p~~~~rPFD~~~dG~v  241 (424)
T PRK06333        163 K-GPLGAPVTACAAGVQAIGDAARLIRSGEADVAICGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRARDGFV  241 (424)
T ss_pred             C-CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCE
T ss_conf             8-962150646079999999999999778706000355133227077899987666512788885435651126899714


Q ss_pred             CCCCCCEEEEECCCCCCCCCC--CCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             454431234402654465434--454101232035555561775487654443320010320244455777777788889
Q gi|254780497|r  158 FGDGAGALILEGVEVKGSSMA--DTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVF  235 (324)
Q Consensus       158 fGDGAaA~ll~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L  235 (324)
                      +|+||+++||++.+.......  ...+.+....+|+....               ....++        ....+.++++|
T Consensus       242 ~gEGa~~~vLe~~~~A~~rg~~i~a~i~G~g~~~d~~~~~---------------~~~~~~--------~~~~~~m~~Al  298 (424)
T PRK06333        242 MGEGAGILVIETLEHALARGAPPLAELVGYGTTADAYHIT---------------SGPEDG--------EGARRAMEGAL  298 (424)
T ss_pred             ECCCCCHHHCCCHHHHHHCCCCEEEEEEEEEEECCCCCCC---------------CCCCCH--------HHHHHHHHHHH
T ss_conf             0785212311668778658996689998789857998888---------------899883--------67799999999


Q ss_pred             HHHHCCCCCCCCCCCCCCCHH-----HHHHHHHHCCCCHHHH-H-HHHHHHCCCHHHHHHHHHHH---HHHCCCCC----
Q ss_conf             874001000121024444415-----8999999719787673-3-65865193301269999999---99806889----
Q gi|254780497|r  236 DSTHLTIENIDWFVPHQANWR-----IINSIVDKMKIPFDKV-I-VTVDIHGNTSAASIPLALAV---AVKEGRVK----  301 (324)
Q Consensus       236 ~~~gl~~~did~~~~Hq~~~~-----~~~~~~~~lgl~~e~~-~-~~~~~~Gn~~sas~~~~L~~---~~~~g~l~----  301 (324)
                      ++++++++|||++-.|-.+-.     =.+.+.+.++=. .+. + .+=..+||+.+++=.+.+-.   +++++.+.    
T Consensus       299 ~~agi~~~~i~yI~aHgtgT~~gD~~E~~al~~~fg~~-~~~~i~S~K~~~GH~~~aaG~~~~i~~~l~l~~~~ippt~n  377 (424)
T PRK06333        299 RQAGIPPEQVQHLNAHATSTPVGDLGEVAAIKKVFGHV-KGLAISSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLN  377 (424)
T ss_pred             HHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCC-CCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             98499914518799527878666999999999985878-88864781110032578899999999999985498399889


Q ss_pred             ---------------------CCCEEEEEEEC-CCCCEEEEEEEC
Q ss_conf             ---------------------99899999971-450145687869
Q gi|254780497|r  302 ---------------------KGDCLLLEAMG-GGFTSGTVLLRW  324 (324)
Q Consensus       302 ---------------------~Gd~vll~~~G-~G~s~~a~llrw  324 (324)
                                           +-++++.-+|| +|.....++=||
T Consensus       378 ~~~p~p~~~~~~~v~~~~~~~~~~~al~nsfGfGG~Na~lil~~y  422 (424)
T PRK06333        378 LENPDPAAEGLDVVANKARPWDMDYALSNGFGFGGVNASILFRRW  422 (424)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECC
T ss_conf             999997777664358887217889999957055702158899501


No 40 
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.67  E-value=1.3e-15  Score=119.43  Aligned_cols=99  Identities=25%  Similarity=0.334  Sum_probs=86.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             9889999999999999974021235443366501223345898531001122026-864444210122003467888998
Q gi|254780497|r   48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADSY  126 (324)
Q Consensus        48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~l  126 (324)
                      .+.++.||+.++++++|++++++|++||.||+++..+...-+..+..+....|++ ..+++.|+..|+|++.|+..|...
T Consensus        22 ~~~~~~dL~~~a~~~~l~r~~l~~~~Id~vi~G~~~~~g~g~~~aR~~~l~aGlp~~vp~~tV~~~CaSGl~Ai~~A~~~  101 (393)
T PRK08235         22 KDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETINKVCASGLRAVTLADQI  101 (393)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHH
T ss_conf             89989999999999999873989899998999935733545519999999769998886078825440547999999999


Q ss_pred             HHHCCCCCCEEEEECCCCCC
Q ss_conf             96415565316763022432
Q gi|254780497|r  127 IRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       127 i~~g~~~~~Lvv~~e~~S~~  146 (324)
                      |++|..+.+|+++.|.+|+.
T Consensus       102 I~sG~~dv~lagGvEsmS~~  121 (393)
T PRK08235        102 IRAGDASVIVAGGMESMSNA  121 (393)
T ss_pred             HHCCCCCEEEEEEEEECCCC
T ss_conf             85898746688604654567


No 41 
>PRK07800 consensus
Probab=99.66  E-value=4e-15  Score=116.31  Aligned_cols=100  Identities=24%  Similarity=0.307  Sum_probs=86.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             89889999999999999974021235443366501223345898531001122026-86444421012200346788899
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADS  125 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~  125 (324)
                      -++.++.||+.++++++|++++++|++||.||+++..+....+..+..+.-+.|++ ..+++.|+..|+|++.|+..|..
T Consensus        21 l~~~~~~~L~~~~i~~~l~~~gl~p~~Id~vi~G~v~~~g~g~n~aR~~~l~aglp~~vp~~tV~~~CaSGl~Ai~~A~~  100 (393)
T PRK07800         21 LKDFSASDLGGIAIKAALEKAGVAADQVDYVIMGQVLQAGAGQIPARQAAVAAGIPMDVPALTINKVCLSGLDAIALADQ  100 (393)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHH
T ss_conf             79998899999999999997499989989899992476676650999999976989888569994501379999999999


Q ss_pred             HHHHCCCCCCEEEEECCCCCC
Q ss_conf             896415565316763022432
Q gi|254780497|r  126 YIRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       126 li~~g~~~~~Lvv~~e~~S~~  146 (324)
                      .|++|..+.+|+++.|.+|+.
T Consensus       101 ~I~~G~~dvvlagGvEsmS~~  121 (393)
T PRK07800        101 LIRAGEFDVVVAGGQESMTQA  121 (393)
T ss_pred             HHHCCCCCEEEEEEEECCCCC
T ss_conf             986799866789852024547


No 42 
>PRK05790 acetyl-CoA acetyltransferase; Provisional
Probab=99.66  E-value=2.9e-15  Score=117.14  Aligned_cols=99  Identities=23%  Similarity=0.304  Sum_probs=85.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             9889999999999999974021235443366501223345898531001122026-864444210122003467888998
Q gi|254780497|r   48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADSY  126 (324)
Q Consensus        48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~l  126 (324)
                      ++.++.+|+.++++++|++++++|++||.|+++++.+....+..+.++.-..|++ ...++.|+..|+|++.|+..|...
T Consensus        22 ~~~~~~~L~~~ai~~~l~r~gi~~~~Id~vi~G~~~~~g~g~n~aR~~~l~aGlp~~vp~~tV~r~CaSG~~Ai~~A~~~  101 (393)
T PRK05790         22 KDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAAIKAGLPVEVPALTINKVCGSGLKAVALAAQA  101 (393)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHH
T ss_conf             88999999999999999982989899998999933656655549999999679998876489963115768999999998


Q ss_pred             HHHCCCCCCEEEEECCCCCC
Q ss_conf             96415565316763022432
Q gi|254780497|r  127 IRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       127 i~~g~~~~~Lvv~~e~~S~~  146 (324)
                      |++|..+.+|+++.|.+|+.
T Consensus       102 I~sG~~dvvlagGvEsmS~~  121 (393)
T PRK05790        102 IRAGDADIVVAGGQESMSQA  121 (393)
T ss_pred             HHCCCCCEEEEECCCCCCCC
T ss_conf             74799768999544324567


No 43 
>PRK06845 consensus
Probab=99.66  E-value=2.8e-15  Score=117.28  Aligned_cols=99  Identities=25%  Similarity=0.292  Sum_probs=84.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC-CCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             98899999999999999740212354433665012233458-98531001122026-86444421012200346788899
Q gi|254780497|r   48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTF-PSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADS  125 (324)
Q Consensus        48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~-p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~  125 (324)
                      ++.++.||+.++++.+|++++++|++||.++++++.+.... +..+.++.-..|++ ..+++.|+..|+|++.|+..|..
T Consensus        22 ~~~~~~~L~~~a~~~al~~~gi~~~~Id~vi~G~~~~~g~~~~~~aR~~aL~aGlp~~vp~~tV~~~CaSG~~Ai~~A~~  101 (392)
T PRK06845         22 KDLSATDLGVAAAKAALEQAGVSPEDIGHVVFGNVIQTGKDAIYLARHIGLKAGLPVGVPALTVNRLCGSGFEAIIQAAK  101 (392)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHH
T ss_conf             88999999999999999871979899798999815645654334999999976999888748884430388999999999


Q ss_pred             HHHHCCCCCCEEEEECCCCCC
Q ss_conf             896415565316763022432
Q gi|254780497|r  126 YIRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       126 li~~g~~~~~Lvv~~e~~S~~  146 (324)
                      .|++|.++.+|+++.|.+|+.
T Consensus       102 ~I~sG~~dvvlagGvEsmS~~  122 (392)
T PRK06845        102 LIYLGEAEAVLAGGVESMSQA  122 (392)
T ss_pred             HHHCCCCCEEEECCEECCCCC
T ss_conf             985799767886255205554


No 44 
>PRK08256 lipid-transfer protein; Provisional
Probab=99.65  E-value=6.3e-15  Score=115.02  Aligned_cols=255  Identities=18%  Similarity=0.176  Sum_probs=153.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             98899999999999999740212354433665012233458985310011220268644442101220034678889989
Q gi|254780497|r   48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYI  127 (324)
Q Consensus        48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li  127 (324)
                      ++.+..+|+.+|+++||+++|++|+|||.++++.+.++...   .......+|+...+++.++.+|+|++.++..|...|
T Consensus        18 ~~~~~~~L~~eA~~~AL~dAGi~~~~ID~v~~G~~~~~~~~---~~~a~~~~g~~g~P~~tV~~~CaSG~~Ai~~Aa~~I   94 (391)
T PRK08256         18 ASWDYPDMAAEAGRAALADAGIDYDEVQQAYVGYVYGDSTS---GQRALYEVGMTGIPVVNVNNNCSTGSTALFLARQAV   94 (391)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCC---HHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf             99999999999999999982989899899989703687500---599999613369965888787616999999999999


Q ss_pred             HHCCCCCCEEEEECCCCCCC---CCC------------------------------------------------------
Q ss_conf             64155653167630224322---245------------------------------------------------------
Q gi|254780497|r  128 RSGVVRRVMVIGSDTFSRIV---DWS------------------------------------------------------  150 (324)
Q Consensus       128 ~~g~~~~~Lvv~~e~~S~~~---d~~------------------------------------------------------  150 (324)
                      ++|..+.+|+++.|.+|+..   .+.                                                      
T Consensus        95 ~sG~advvla~G~E~Ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~g~t~e~~A~vav~~  174 (391)
T PRK08256         95 ASGAADCALALGFEQMQPGALGSVWDDRPSPLERHDKALAELVGFDGFPPALRMFGGAGREHMQKYGTTAETFAKIGAKA  174 (391)
T ss_pred             HCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf             76998889996440357666566658776711224566665304443638999999999999999786999859999997


Q ss_pred             -------------CCC-------C-----------CCCCCCCCCEEEEECCCCCCCCCC--CCCCEEEEEECCCCCCCCE
Q ss_conf             -------------663-------2-----------323454431234402654465434--4541012320355555617
Q gi|254780497|r  151 -------------DRS-------T-----------CVLFGDGAGALILEGVEVKGSSMA--DTGILSTYLCSDGSYIDKL  197 (324)
Q Consensus       151 -------------d~~-------~-----------~~lfGDGAaA~ll~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  197 (324)
                                   ++.       +           +....|||+|+||...+.......  ...+......++..  .. 
T Consensus       175 ~~~a~~np~A~~~~~~t~e~v~~s~~i~~plt~~~~s~~sDGAaAvvl~See~A~~~g~~~~v~I~g~a~~~~~~--~~-  251 (391)
T PRK08256        175 RRHAANNPYAQFRDEVTLEDVLASPMIWGPLTRLQCCPPTCGAAAAILCSEEFARKHGLDRAVEIAAQAMTTDFP--ST-  251 (391)
T ss_pred             HHHHHHCCHHCCCCCCCHHHHHCCCCCCCHHHHHHCCCCCCCEEEEEEECHHHHHHCCCCCCEEEEEEEEECCCC--HH-
T ss_conf             898871961013788889998234852240257645899997189999569999864999877999999852672--00-


Q ss_pred             EECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH----HHH
Q ss_conf             7548765444332001032024445577777778888987400100012102444441589999997197876----733
Q gi|254780497|r  198 YVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD----KVI  273 (324)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~~  273 (324)
                       ....       ..     ..+.  .........+++++++|++++|||.+-+|-+--..--...+.||+.++    +++
T Consensus       252 -~~~~-------~~-----~~~~--~~~~~~~Aa~~a~~~AGl~~~DiDv~Ei~daFa~~~l~~le~lG~~~~g~~~~~~  316 (391)
T PRK08256        252 -FDGG-------DM-----INLV--GYDMTRAAAQQVYEQAGVGPEDIDVIELHDCFSANELLTYEALGLCPEGEAEKFI  316 (391)
T ss_pred             -CCCC-------CC-----HHHC--CCCCHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHH
T ss_conf             -1478-------81-----4430--5640699999999984999888767642155548899999981999888268898


Q ss_pred             H------------H----HHHHCCCHHHHHHHH---HHHHHH----CCCCCCCCEEEEEEECCCCCEEEEEEE
Q ss_conf             6------------5----865193301269999---999998----068899989999997145014568786
Q gi|254780497|r  274 V------------T----VDIHGNTSAASIPLA---LAVAVK----EGRVKKGDCLLLEAMGGGFTSGTVLLR  323 (324)
Q Consensus       274 ~------------~----~~~~Gn~~sas~~~~---L~~~~~----~g~l~~Gd~vll~~~G~G~s~~a~llr  323 (324)
                      .            |    .--.||-..++=...   +.+-++    ..+++.-...|....|.|-.+...+|+
T Consensus       317 ~~g~~~~~G~~pvN~~GG~la~GhP~GatG~~~~~e~~~QLrG~ag~rQV~~a~~aL~~~~G~gg~~~v~i~~  389 (391)
T PRK08256        317 DDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQLRGTAGARQVEGARLALQHNLGLGGACVVTLYQ  389 (391)
T ss_pred             HCCCCCCCCCEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEEE
T ss_conf             6688556998238189508646886645799999999999711020354787005766054645007999985


No 45 
>pfam08545 ACP_syn_III 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III. This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.
Probab=99.65  E-value=1.6e-16  Score=125.15  Aligned_cols=80  Identities=60%  Similarity=1.017  Sum_probs=72.5

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEE
Q ss_conf             44210122003467888998964155653167630224322245663232345443123440265446543445410123
Q gi|254780497|r  107 FDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGDGAGALILEGVEVKGSSMADTGILSTY  186 (324)
Q Consensus       107 ~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~  186 (324)
                      |||+++|+|++++|++|..+|++|+++++|||++|++|+++||+|+.++++|||||+|+||++.+..     ..++++++
T Consensus         1 fDi~~~Csg~~~aL~~A~~~i~sg~~~~vLvv~~e~~s~~~~~~d~~~~~lfGDga~A~il~~~~~~-----~~~il~~~   75 (80)
T pfam08545         1 FDINAACSGFVYALSTAAALIRSGRAKNVLVVGAETLSRILDWTDRSTAVLFGDGAGAVVLEATEEG-----GARILSSV   75 (80)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCEEEEEEEEECCCC-----CCEEEEEE
T ss_conf             9606414889999999999998799885899851124553686677246998640269999971789-----98488889


Q ss_pred             EECCC
Q ss_conf             20355
Q gi|254780497|r  187 LCSDG  191 (324)
Q Consensus       187 ~~~~~  191 (324)
                      +.+|+
T Consensus        76 ~~tdg   80 (80)
T pfam08545        76 LGSDG   80 (80)
T ss_pred             EECCC
T ss_conf             84589


No 46 
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=99.65  E-value=1.6e-14  Score=112.41  Aligned_cols=296  Identities=19%  Similarity=0.248  Sum_probs=169.0

Q ss_pred             EEEEEEEEEECCCCEECHHHH-HHHH-CCCHH-HHH--HCCCCCEE--------EE------E-----CCCCCHHHHHHH
Q ss_conf             269999999649841178899-9880-99987-811--02475188--------98------2-----898899999999
Q gi|254780497|r    3 RSTVRGIGLSLPRRVLSNSDL-ESIV-DTSDG-WIK--RRVGISRR--------HI------A-----GKDETTASLGEA   58 (324)
Q Consensus         3 ~~~I~~~g~ylP~~~v~~~el-~~~~-~~~~~-~i~--~~~GI~~R--------~~------~-----~~~e~~~~la~~   58 (324)
                      +|.|+|+|..-|--. +.+++ +... |.+.- .|.  ...+...+        -+      .     ........+++.
T Consensus        62 RVVITGiGiVsp~G~-~~e~fw~aL~~G~SGI~~i~~fd~~~~~~~iageV~~~df~p~~~~~~~k~~~r~dr~~~~al~  140 (477)
T PTZ00050         62 RVVCTGIGVVNGLGI-GIEHFWENIINGYNSIDKITKFDITGMACGIGSEIDKKDFNPSDYYTNKKDANRNDDCTHYAVA  140 (477)
T ss_pred             CEEEECCHHHCCCCC-CHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHCCCCHHHHHHHCHHHHHHHH
T ss_conf             499958133178819-9999999997589981417866766897766886026788966604788888530799999999


Q ss_pred             HHHHHHHHHCCCCCCCCE----EEEECCCCC-----------------CCCC---------CCCCCHHHHHHCCCCCCCC
Q ss_conf             999999740212354433----665012233-----------------4589---------8531001122026864444
Q gi|254780497|r   59 AARDALHHAEMSVDDIDL----IIVATSTPD-----------------QTFP---------STAVNIQNRLGMKRGFAFD  108 (324)
Q Consensus        59 Aa~~al~~a~~~~~~Id~----ii~~s~~~~-----------------~~~p---------~~a~~i~~~LGl~~~~~~d  108 (324)
                      |+++|++++|++++++|.    +++++....                 ...|         ..+++|+..+|++ .+++.
T Consensus       141 Aa~eAl~DAgl~~~~~~~~r~Gv~iGs~~gg~~~~e~~~~~l~~~g~~~v~p~~~~~~~~n~~a~~is~~~~l~-Gps~t  219 (477)
T PTZ00050        141 ATRLAIDDAKIDLEKIDCDKTGTIIGSGIGGLLFLEKEMKTLYEKGHKRISPYLIPAMIANTPAGFVSIEHNIR-GISLG  219 (477)
T ss_pred             HHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC-CCCCC
T ss_conf             99999996799954367101534870487738999999999985497743852777888769999999973994-87567


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC-CCC----------C------------CCCC-CCCCCCCCCCCCE
Q ss_conf             21012200346788899896415565316763022-432----------2------------2456-6323234544312
Q gi|254780497|r  109 MQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF-SRI----------V------------DWSD-RSTCVLFGDGAGA  164 (324)
Q Consensus       109 i~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~-S~~----------~------------d~~d-~~~~~lfGDGAaA  164 (324)
                      +..+|+|++.||..|.++|+.|..+.+++.++|.. ++.          +            .+.| ....+.+|+||++
T Consensus       220 i~tACaSs~~AI~~A~~~Ir~G~~d~~IaGG~d~~l~p~~~~~f~~l~aL~s~~nd~P~~~~rPFD~~rdG~V~GEGag~  299 (477)
T PTZ00050        220 MLSACATSGNTIGEAYRYIKYKEYDVMICGGTEASITPISFAGFNALKALCSGYNDNPKKGCRPFDLKRSGFVMGEGAGI  299 (477)
T ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCEEE
T ss_conf             04474788999999999997598455999845666672889999987655403678987672446589982772376589


Q ss_pred             EEEECCCCCCCCCC--CCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             34402654465434--4541012320355555617754876544433200103202444557777777888898740010
Q gi|254780497|r  165 LILEGVEVKGSSMA--DTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTI  242 (324)
Q Consensus       165 ~ll~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~  242 (324)
                      ++|++.+.......  ...+.+....+|+.+.               .....++        ....+.++++|+++++++
T Consensus       300 lVLE~~e~A~~RGa~Iyaei~G~~~~~Dg~~~---------------t~p~p~g--------~g~~~am~~AL~~Agl~~  356 (477)
T PTZ00050        300 LILESYEHAIKRNAKIYGEIIAYSSECDAFHI---------------TAPEPNG--------KGLCNSIHKAIKNANINI  356 (477)
T ss_pred             EEEEEHHHHHHCCCEEEEEEECCCCCCCCCCC---------------CCCCCCH--------HHHHHHHHHHHHHHCCCC
T ss_conf             99728877765899886752055424689988---------------7749799--------999999999999717897


Q ss_pred             CCCCCCCCCCCCHHH-----HHHHHHHCCCCHHHHH--HHHHHHCCCHHHHHHHHHHH---HHHCCCCCC----------
Q ss_conf             001210244444158-----9999997197876733--65865193301269999999---998068899----------
Q gi|254780497|r  243 ENIDWFVPHQANWRI-----INSIVDKMKIPFDKVI--VTVDIHGNTSAASIPLALAV---AVKEGRVKK----------  302 (324)
Q Consensus       243 ~did~~~~Hq~~~~~-----~~~~~~~lgl~~e~~~--~~~~~~Gn~~sas~~~~L~~---~~~~g~l~~----------  302 (324)
                      +|||++-.|-.+-..     .+.+.+.++=...+++  .+=..+||+..|+=.+.+..   +++++.+.|          
T Consensus       357 ~dIdyInaHGTgT~~gD~~E~~Ai~~vfg~~~~~~~VsS~Ks~iGH~lgAAGa~e~i~~llal~~g~iPPt~n~~~~dp~  436 (477)
T PTZ00050        357 NDVKYINAHGTSTNLNDKIETKVFKNVFKDHAYKLHISSTKSMTGHCIGAAGAIESIVCLKAMQTNIIPPTINYENKDDD  436 (477)
T ss_pred             CCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEECCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf             45008996177688789999999999865789986588861333004799999999999999841943898898998998


Q ss_pred             ----------------CCEEEEEEECCCCCEEEEEEE
Q ss_conf             ----------------989999997145014568786
Q gi|254780497|r  303 ----------------GDCLLLEAMGGGFTSGTVLLR  323 (324)
Q Consensus       303 ----------------Gd~vll~~~G~G~s~~a~llr  323 (324)
                                      -+.+|--+||=|=+-.++++|
T Consensus       437 ~dl~~v~~~~~~~~~~~~~al~nSFGFGG~Na~lvl~  473 (477)
T PTZ00050        437 CDLNYTPNESIHAKENIDISLNTNLGFGGHNTALLFG  473 (477)
T ss_pred             CCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEE
T ss_conf             8866588854355678758999502377448999998


No 47 
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.65  E-value=4e-14  Score=109.91  Aligned_cols=299  Identities=22%  Similarity=0.301  Sum_probs=169.4

Q ss_pred             EEEEEEEEEECCCCEECHHHH-HHHHCCCHH--HHHH--CCCCCEEEEEC----C------CCCHHHHHHHHHHHHHHHH
Q ss_conf             269999999649841178899-988099987--8110--24751889828----9------8899999999999999740
Q gi|254780497|r    3 RSTVRGIGLSLPRRVLSNSDL-ESIVDTSDG--WIKR--RVGISRRHIAG----K------DETTASLGEAAARDALHHA   67 (324)
Q Consensus         3 ~~~I~~~g~ylP~~~v~~~el-~~~~~~~~~--~i~~--~~GI~~R~~~~----~------~e~~~~la~~Aa~~al~~a   67 (324)
                      +|.|+|+|.-.|--. +.+++ .....-..+  .|.+  -.|...+....    +      .....-++..|++++++++
T Consensus        12 rVvITG~G~vsp~G~-~~e~~w~~L~~G~Sgi~~i~~~~~~~~~~~~ag~vd~~~~~~~~~~~~~~~~~~~aa~~Al~da   90 (425)
T PRK06501         12 IVAVTGMGVVTSLGQ-GKADNWAALTAGESGIHTITRFPTEGLRTRIAGTVDFLPESPFGASALSEALARLAAEEALAQA   90 (425)
T ss_pred             CEEEECCEEECCCCC-CHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHC
T ss_conf             999975557788828-9999999997499877738878865798757897888885663354799999999999999974


Q ss_pred             CCCCCCCCEEE-----------------EECC----CCC----------CCCC---------CCCCCHHHHHHCCCCCCC
Q ss_conf             21235443366-----------------5012----233----------4589---------853100112202686444
Q gi|254780497|r   68 EMSVDDIDLII-----------------VATS----TPD----------QTFP---------STAVNIQNRLGMKRGFAF  107 (324)
Q Consensus        68 ~~~~~~Id~ii-----------------~~s~----~~~----------~~~p---------~~a~~i~~~LGl~~~~~~  107 (324)
                      ++++.+++.-+                 ....    .++          ...|         ..+..|...+|++ .+++
T Consensus        91 gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~-Gp~~  169 (425)
T PRK06501         91 GIGSGDFPGPLFLAVPPVELEWPARFELAAAVGANGPPSYDRLLRACRGGRFDALHERFLFGSIADRLADRFGTR-GLPI  169 (425)
T ss_pred             CCCCCCCCCCCEECCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC-CCCC
T ss_conf             989455666510013554345565189999965785788999999628988884300223769999999986899-9871


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC-CC---------------------CCCCCCC-CCCCCCCCCCCE
Q ss_conf             421012200346788899896415565316763022-43---------------------2224566-323234544312
Q gi|254780497|r  108 DMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF-SR---------------------IVDWSDR-STCVLFGDGAGA  164 (324)
Q Consensus       108 di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~-S~---------------------~~d~~d~-~~~~lfGDGAaA  164 (324)
                      .++.+|+|++.||..|.++|+.|..+.++++++|.. +.                     ..++.|+ ...+++|+||++
T Consensus       170 tvstACASg~~AI~~A~~~Ir~G~~D~~iaGG~d~~~~~~~~~~f~~~~aLs~~~d~P~~a~RPFD~~RdG~v~GEGaa~  249 (425)
T PRK06501        170 TLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPFSKDRDGFVMAEGAGA  249 (425)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCEEECCCEEE
T ss_conf             42226278999999999999758988899933203436288889886323320789977676778889986353570799


Q ss_pred             EEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             34402654465434454101232035555561775487654443320010320244455777777788889874001000
Q gi|254780497|r  165 LILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIEN  244 (324)
Q Consensus       165 ~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~d  244 (324)
                      +|||+.+.......  .+..... ..+...+     +..     ......++        ....+.++++|++++++++|
T Consensus       250 lVLE~~~~A~~RGA--~I~a~i~-g~g~~~d-----~~~-----~~~~~p~~--------~~~~~~~~~al~~Ag~~~~~  308 (425)
T PRK06501        250 LVLESLESAVARGA--KILGILA-GCGEKAD-----SFH-----RTRSSPDG--------SPAIGCVRAALADAGLTEDQ  308 (425)
T ss_pred             EEECCHHHHHHCCC--EEEEEEE-CCEECCC-----CCC-----CCCCCCCH--------HHHHHHHHHHHHHHCCCCCC
T ss_conf             98333777986899--6999984-6276478-----988-----87799886--------99999999999982988245


Q ss_pred             CCCCCCCCCCHHH-----HHHHHHHCCCCHHHH--HHHHHHHCCCHHHHHHHHHH---HHHHCCCCC-------------
Q ss_conf             1210244444158-----999999719787673--36586519330126999999---999806889-------------
Q gi|254780497|r  245 IDWFVPHQANWRI-----INSIVDKMKIPFDKV--IVTVDIHGNTSAASIPLALA---VAVKEGRVK-------------  301 (324)
Q Consensus       245 id~~~~Hq~~~~~-----~~~~~~~lgl~~e~~--~~~~~~~Gn~~sas~~~~L~---~~~~~g~l~-------------  301 (324)
                      ||++..|-.+-..     .+.+.+.+|=...+.  ..+=..+||+..++=.+.+.   .+++++.+.             
T Consensus       309 i~~i~aHgtgT~~~D~~E~~ai~~~fg~~~~~~~v~s~Ks~~GH~~gaaG~~e~~~~~lal~~~~ippt~n~~~~dp~~~  388 (425)
T PRK06501        309 IDYINAHGTSTPENDKMEYLGLSAVFGERLSSIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQHGRIPPTINYDNPDPAIP  388 (425)
T ss_pred             CCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf             13798058768676799999999986356899868895343302379999999999999981395488999899999998


Q ss_pred             -----------CCCEEEEEEEC-CCCCEEEEEEEC
Q ss_conf             -----------99899999971-450145687869
Q gi|254780497|r  302 -----------KGDCLLLEAMG-GGFTSGTVLLRW  324 (324)
Q Consensus       302 -----------~Gd~vll~~~G-~G~s~~a~llrw  324 (324)
                                 +-+++|.-+|| .|.....++=||
T Consensus       389 l~~v~~~~~~~~~~~al~nsfGFGG~Naslvl~r~  423 (425)
T PRK06501        389 LDVVPNVARDARVTAVLSNSFGFGGQNASLVLTRE  423 (425)
T ss_pred             CCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECC
T ss_conf             55289976578878999976147724379999637


No 48 
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.65  E-value=4.5e-14  Score=109.55  Aligned_cols=298  Identities=17%  Similarity=0.190  Sum_probs=166.0

Q ss_pred             CCEEEEEEEEEECCCCEECHHHH-HHHHC-C------CHHHHHHCCCCCEEE---EEC-CCC-----------CHHHHHH
Q ss_conf             92269999999649841178899-98809-9------987811024751889---828-988-----------9999999
Q gi|254780497|r    1 MIRSTVRGIGLSLPRRVLSNSDL-ESIVD-T------SDGWIKRRVGISRRH---IAG-KDE-----------TTASLGE   57 (324)
Q Consensus         1 M~~~~I~~~g~ylP~~~v~~~el-~~~~~-~------~~~~i~~~~GI~~R~---~~~-~~e-----------~~~~la~   57 (324)
                      |..|.|+|+|.-.|.-. +.+++ +.... .      ++.++.+ .+...|.   +.+ .+.           ...-++.
T Consensus        11 ~~dVaItG~g~~~p~g~-~~~efw~~L~~G~sgi~~~~~~~~~~-~~~~~~~~g~~~~~fd~~~~~~~~~~~~~~~~~~~   88 (418)
T PRK07910         11 FPNVVVTGIAMTTALAT-DAETTWKLLLDGQSGIRTLDDPFVEE-FDLPVRIGGHLLEEFDHQLTRVELRRLSYLQRMST   88 (418)
T ss_pred             CCCEEEECCEEECCCCC-CHHHHHHHHHCCCCCEEECCCCCCHH-CCCCCEEEEEECCCCCCCCCHHCHHHHHHHHHHHH
T ss_conf             98999977787898959-99999999973898767478422001-38961273365667665578026876359999999


Q ss_pred             HHHHHHHHHHC---CCCCCCCEEEEECCCC------------C----CCC--------C-CCCCCHHHHHHCCCCCCCCC
Q ss_conf             99999997402---1235443366501223------------3----458--------9-85310011220268644442
Q gi|254780497|r   58 AAARDALHHAE---MSVDDIDLIIVATSTP------------D----QTF--------P-STAVNIQNRLGMKRGFAFDM  109 (324)
Q Consensus        58 ~Aa~~al~~a~---~~~~~Id~ii~~s~~~------------~----~~~--------p-~~a~~i~~~LGl~~~~~~di  109 (324)
                      .+++++++++|   ++++.+..++..+...            .    ...        | ..+..+...+|++ ..++.+
T Consensus        89 ~~~~~a~edaG~~~~~~~r~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~-Gp~~t~  167 (418)
T PRK07910         89 VLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFSYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAK-AGVITP  167 (418)
T ss_pred             HHHHHHHHHCCCCCCCHHHCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-CCCCCC
T ss_conf             9999999977999888225017988731555889999999985485655877899986637999999982897-885553


Q ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC-CC----------C------------CCCCC-CCCCCCCCCCCCEE
Q ss_conf             1012200346788899896415565316763022-43----------2------------22456-63232345443123
Q gi|254780497|r  110 QAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF-SR----------I------------VDWSD-RSTCVLFGDGAGAL  165 (324)
Q Consensus       110 ~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~-S~----------~------------~d~~d-~~~~~lfGDGAaA~  165 (324)
                      ..+|++++.||..|+.+|+.|+++.+|+.++|.. ++          .            ..+.| ....+++|+||+++
T Consensus       168 ~tACsSs~~Ai~~A~~~I~~G~~d~ai~GG~~~~l~~~~~~~f~~l~~~~s~~~~~p~~~~rPFD~~rdG~v~gEGag~l  247 (418)
T PRK07910        168 VSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRDGFVFGEGGALM  247 (418)
T ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCEEEE
T ss_conf             05323488999999999980998889954522126817789999977774458899887768655678986404824888


Q ss_pred             EEECCCCCCCCCC--CCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             4402654465434--45410123203555556177548765444332001032024445577777778888987400100
Q gi|254780497|r  166 ILEGVEVKGSSMA--DTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIE  243 (324)
Q Consensus       166 ll~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~  243 (324)
                      ||++.+.......  ...+.++-..+|+...               .....++        +...+.++++|++++++++
T Consensus       248 vLe~l~~A~~rGa~I~a~i~G~g~~~Dg~~~---------------~~p~p~g--------~~~~~am~~Al~~agl~p~  304 (418)
T PRK07910        248 VIETEEHAKARGANILARIMGASITSDGYHM---------------VAPDPNG--------ERAGHAMTRAIQLAGLTPT  304 (418)
T ss_pred             EEECHHHHHHCCCEEEEEEEEEEECCCCCCC---------------CCCCCCC--------HHHHHHHHHHHHHHCCCCC
T ss_conf             8502545663698578998513645888887---------------5789980--------7899999999998289953


Q ss_pred             CCCCCCCCCCCHHH-----HHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH---HHHHCCCCCC-------------
Q ss_conf             01210244444158-----99999971978767336586519330126999999---9998068899-------------
Q gi|254780497|r  244 NIDWFVPHQANWRI-----INSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALA---VAVKEGRVKK-------------  302 (324)
Q Consensus       244 did~~~~Hq~~~~~-----~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~---~~~~~g~l~~-------------  302 (324)
                      |||++-.|-.+-..     .+++.+.++=..-.+..+=..+||+-+|+=.+.+-   .+++.+.+.|             
T Consensus       305 ~IdyI~aHGTgT~~gD~~E~~Ai~~vfg~~~~~v~S~Ks~iGH~~~AaG~~e~i~~~lal~~~~ipPt~n~~~~dp~~~l  384 (418)
T PRK07910        305 DIDHVNAHATGTSVGDVAEGRAINNALGGHRPAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLKNLDPEIDL  384 (418)
T ss_pred             CCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEECCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf             40779956777876699999999998669998412812434203899999999999999724975889998999999995


Q ss_pred             -----------CCEEEEEEEC-CCCCEEEEEEEC
Q ss_conf             -----------9899999971-450145687869
Q gi|254780497|r  303 -----------GDCLLLEAMG-GGFTSGTVLLRW  324 (324)
Q Consensus       303 -----------Gd~vll~~~G-~G~s~~a~llrw  324 (324)
                                 -++++.-+|| +|..+..++=||
T Consensus       385 ~~v~~~~~~~~~~~al~nsfGfGG~N~~lvl~ry  418 (418)
T PRK07910        385 DVVAGEPRPGNYRYAINNSFGFGGHNVALAFGRY  418 (418)
T ss_pred             CCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECC
T ss_conf             4388987679988999945055810269998359


No 49 
>pfam02797 Chal_sti_synt_C Chalcone and stilbene synthases, C-terminal domain. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain.
Probab=99.65  E-value=5.1e-16  Score=121.97  Aligned_cols=107  Identities=22%  Similarity=0.297  Sum_probs=92.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHH---HHHHHHHCCCHHHHHHHHHHH
Q ss_conf             02444557777777888898740010001210244444158999999719787673---365865193301269999999
Q gi|254780497|r  217 KAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKV---IVTVDIHGNTSAASIPLALAV  293 (324)
Q Consensus       217 ~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~---~~~~~~~Gn~~sas~~~~L~~  293 (324)
                      +.+...+-+++.+.+.++|++.+++..|+.+|++|++++++++++.+.|++++++.   +.++.+|||++|+++++.|++
T Consensus        32 ~~VP~~i~~~l~~~v~~~L~~~gl~~~d~~~wa~HPGG~~Ilda~~~~L~L~~~~l~~Sr~vL~~~GNmSS~tVlfVLe~  111 (151)
T pfam02797        32 KDVPQLISKNIEKCLVEAFDPLGISDWNSIFWIAHPGGPAILDQVEAKLGLKPEKLRASRHVLSEYGNMSSACVLFILDE  111 (151)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf             26369999989999999998749983324527887997899999999819998999999999997586189999999999


Q ss_pred             HHHCC----CCCCC---CEEEEEEECCCCCEEEEEEE
Q ss_conf             99806----88999---89999997145014568786
Q gi|254780497|r  294 AVKEG----RVKKG---DCLLLEAMGGGFTSGTVLLR  323 (324)
Q Consensus       294 ~~~~g----~l~~G---d~vll~~~G~G~s~~a~llr  323 (324)
                      .++..    .-.+|   ++.++++||+||++.++++|
T Consensus       112 ~~~~~~~~~~~~~g~~~e~gl~~AfGPG~t~E~~LLR  148 (151)
T pfam02797       112 MRKKSLKKGKSTTGEGLEWGVLFGFGPGLTVETVVLR  148 (151)
T ss_pred             HHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHH
T ss_conf             9976644478888888656899996882999999970


No 50 
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.64  E-value=1.3e-14  Score=112.93  Aligned_cols=202  Identities=23%  Similarity=0.235  Sum_probs=133.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC--CCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             98899999999999999740212354433665012233458--9853100112202686444421012200346788899
Q gi|254780497|r   48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTF--PSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADS  125 (324)
Q Consensus        48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~--p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~  125 (324)
                      .+.+..||+++|++++|+++|++|+|||-|++++..+....  +..+..++..+|+++..++.++.+|+|++.++..|..
T Consensus        18 ~~~~~~dL~~~a~~~al~~agl~~~~ID~vi~G~~~~g~~~~~~~~a~~~a~~~Gl~~~p~~~v~~~c~SG~~Ai~~Aa~   97 (389)
T PRK06064         18 WDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSGGRFVGQEHIAALIADYAGLAPIPATRVEAACASGGAAVRQAYL   97 (389)
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH
T ss_conf             99799999999999999980949899599999812766434324099999997599998668993753679999999999


Q ss_pred             HHHHCCCCCCEEEEECCCCCCCCCC---------CCC-------------------------------------------
Q ss_conf             8964155653167630224322245---------663-------------------------------------------
Q gi|254780497|r  126 YIRSGVVRRVMVIGSDTFSRIVDWS---------DRS-------------------------------------------  153 (324)
Q Consensus       126 li~~g~~~~~Lvv~~e~~S~~~d~~---------d~~-------------------------------------------  153 (324)
                      .|++|.++.+|+++.|.+|+.-...         |+.                                           
T Consensus        98 ~I~sG~~dvvlagG~E~ms~~p~~~~~~~~~~~~d~~~~~~~g~~~~~~~a~~a~~~~~~ygitre~~~~~A~~s~~~A~  177 (389)
T PRK06064         98 AVASGEADVVLAAGVEKMTDVPTPDATEAIARAADREWEEFFGATFPGLYALIARAYMHKYGTTEEDLALVAVKNHYNGS  177 (389)
T ss_pred             HHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             99739998999944223577987642112220244220101488719999999999999969699999999997556542


Q ss_pred             -----------------------------CCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCC
Q ss_conf             -----------------------------232345443123440265446543445410123203555556177548765
Q gi|254780497|r  154 -----------------------------TCVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPS  204 (324)
Q Consensus       154 -----------------------------~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (324)
                                                   .+....|||+|+||.+.+.... .....+   ++...+...+....  .  
T Consensus       178 ~np~a~~~~~it~e~~~~~~~i~~pl~~~n~s~~~DGAaAvvl~s~~~A~~-l~~~pv---~i~g~~~~~~~~~~--~--  249 (389)
T PRK06064        178 KNPYAQFQNEITVEQVLNSPYVADPLKLLDCSPITDGAAAVILASEEKAKE-YTDTPV---WIKASGQASDTIAL--H--  249 (389)
T ss_pred             CCCHHCCCCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCEEEEEECHHHHHH-CCCCCE---EEEEEEEEECCCCC--C--
T ss_conf             395210568865989645444335102211146788744999925999986-589975---99999999512113--6--


Q ss_pred             CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCH
Q ss_conf             44433200103202444557777777888898740010001210244444158999999719787
Q gi|254780497|r  205 TSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPF  269 (324)
Q Consensus       205 ~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~  269 (324)
                      ..          +.+.  ........++++|+++|++++|||.|-+|-+-....-...+.||+-+
T Consensus       250 ~~----------~~~~--~~~~~~~A~~~al~~aGl~~~DiD~~ElneaFa~~~l~~~e~LGl~~  302 (389)
T PRK06064        250 DR----------KDFT--TLEAAVVAAEKAYKMAGIDPKDIDVAEVHDCFTIAEILAYEDLGFAK  302 (389)
T ss_pred             CC----------CCCC--CCCHHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHHHHHHHCCCCC
T ss_conf             78----------7534--58728999999999829998887688741554799999999829996


No 51 
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=99.64  E-value=5.9e-14  Score=108.80  Aligned_cols=247  Identities=13%  Similarity=0.103  Sum_probs=151.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             98899999999999999740212354433665012233458985310011220268644442101220034678889989
Q gi|254780497|r   48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYI  127 (324)
Q Consensus        48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li  127 (324)
                      ++.+..+|+.+|+++||+++|++++|||.+++++...+......+..+...||+.+.....++++|+++..++..|...|
T Consensus        23 ~~~s~~~L~~eA~~~AL~DAGl~~~dID~~~~g~~~~~~~~~~~~~~l~~~lg~~~~p~~~v~~~~asG~~al~~A~~aI  102 (400)
T PRK06157         23 WDAGGEDLMVEAYQEAIADAGIEPKQIEAAWFGTHYDEIGTGKSGTPLSMALRLPNIPVTRVENFCATGTEAFRGAVYAV  102 (400)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf             99799999999999999973999899899989814775445525799999618998733786477449999999999999


Q ss_pred             HHCCCCCCEEEEECCCCCCC---------------------------------------CCCC-----------------
Q ss_conf             64155653167630224322---------------------------------------2456-----------------
Q gi|254780497|r  128 RSGVVRRVMVIGSDTFSRIV---------------------------------------DWSD-----------------  151 (324)
Q Consensus       128 ~~g~~~~~Lvv~~e~~S~~~---------------------------------------d~~d-----------------  151 (324)
                      ++|.++.+|+++.|..+..-                                       .+++                 
T Consensus       103 ~sG~~d~vlv~g~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~A~~a~~ym~~yG~t~e~l~~~~A~VAvk~r~nA~  182 (400)
T PRK06157        103 ASGAYDIALALGVEKLKDTGYGGLPVASRGTLAPMWMPNGSAPGNFAQLASAYRAKHGVSREDLKRAMAHVSVKSHANGA  182 (400)
T ss_pred             HCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             80988789996454256775344754345630344302587389999999999999797987899999999999999986


Q ss_pred             --CC--------------C-----------CCCCCCCCCEEEEECCCCCCCCCCCCCC-EEEE-EECCCCCCCCEEECCC
Q ss_conf             --63--------------2-----------3234544312344026544654344541-0123-2035555561775487
Q gi|254780497|r  152 --RS--------------T-----------CVLFGDGAGALILEGVEVKGSSMADTGI-LSTY-LCSDGSYIDKLYVDGG  202 (324)
Q Consensus       152 --~~--------------~-----------~~lfGDGAaA~ll~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~  202 (324)
                        |.              +           +...+|||+|+||.+.+.......+..+ +... ..+.. ...       
T Consensus       183 ~NP~A~~r~~iT~edvl~s~~Ia~PL~llDc~~~sDGAaAvVv~S~e~Ar~l~~~~~v~i~~~~~~~~~-~~~-------  254 (400)
T PRK06157        183 RNPKAHLRKAVTEEQVLNAPMVAYPLGLFDCCGVSDGAACAIVTTPEIARALGKKDLVTVKALQLAVSN-GWE-------  254 (400)
T ss_pred             HCCCCCCCCCCCHHHHCCCCCCCCCCCHHHCCCCCCEEEEEEEECHHHHHHCCCCCCEEEEEEEEECCC-CCC-------
T ss_conf             097412569988788712886768894887588778059999956999986078996799999986268-874-------


Q ss_pred             CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCCCCCCCCCCHHHHHHHHHHCCCCHH----HHHH--
Q ss_conf             6544433200103202444557777777888898740010--0012102444441589999997197876----7336--
Q gi|254780497|r  203 PSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTI--ENIDWFVPHQANWRIINSIVDKMKIPFD----KVIV--  274 (324)
Q Consensus       203 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~--~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~~~--  274 (324)
                       ........          ..........+++++++|+++  +|||.+-+|-.--..--.+.|.||+-+.    +++.  
T Consensus       255 -~~~~~~~~----------~~~~~~~~aa~~a~~~AGi~~p~~DiDv~elyD~Ft~~~l~~lE~lGfc~~Ge~~~~~~~G  323 (400)
T PRK06157        255 -SQYNGWDG----------SYFHTTRVAAKKAYAEAGIEDPRKELSLMEVHDCFSITELVTMEDLGLSEPGQAWRDVLDG  323 (400)
T ss_pred             -CCCCCCCC----------CCCHHHHHHHHHHHHHHCCCCCHHHCEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHCC
T ss_conf             -34665543----------3348899999999998079997666608886166628999999981998888279999779


Q ss_pred             ----------H----HHHHCCCHHHHHHHHHHHHHHC-------CCCCCCCEEEEEEECC
Q ss_conf             ----------5----8651933012699999999980-------6889998999999714
Q gi|254780497|r  275 ----------T----VDIHGNTSAASIPLALAVAVKE-------GRVKKGDCLLLEAMGG  313 (324)
Q Consensus       275 ----------~----~~~~Gn~~sas~~~~L~~~~~~-------g~l~~Gd~vll~~~G~  313 (324)
                                |    +--.||...++=+..+.++.++       .+++.-+..|..+.|.
T Consensus       324 ~~~~~G~lPvNtsGGlls~Ghp~gatG~~~~~E~~~QLrG~Ag~rQV~~a~~~l~~~~GG  383 (400)
T PRK06157        324 FFDADGGVPCQIDGGLKCFGHPIGASGLRMLYEMYLQLLGRAGERQLKDPRLGLTHNLGG  383 (400)
T ss_pred             CCCCCCCEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCC
T ss_conf             835799730668850530798674009999999999964776566489864899957898


No 52 
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.64  E-value=4.7e-14  Score=109.44  Aligned_cols=297  Identities=19%  Similarity=0.251  Sum_probs=169.1

Q ss_pred             CEEEEEEEEEECCCCEECHHHHHH-HHCCCHHH--HH--HCCCCCEEEEEC-CC---------------CCHHHHHHHHH
Q ss_conf             226999999964984117889998-80999878--11--024751889828-98---------------89999999999
Q gi|254780497|r    2 IRSTVRGIGLSLPRRVLSNSDLES-IVDTSDGW--IK--RRVGISRRHIAG-KD---------------ETTASLGEAAA   60 (324)
Q Consensus         2 ~~~~I~~~g~ylP~~~v~~~el~~-~~~~~~~~--i~--~~~GI~~R~~~~-~~---------------e~~~~la~~Aa   60 (324)
                      .+|.|+|+|.-.|.-. +.|++-+ ...-....  +.  ...+...|.... ++               ....-++.+++
T Consensus         4 rrVaItG~g~~~p~g~-~~e~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~~~~~~~~~~~d~~~~~~l~aa   82 (414)
T PRK08722          4 RRVVVTGMGMLSPVGN-TVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKDFNCEEYMSKKDARKMDLFIQYGIAAG   82 (414)
T ss_pred             CCEEEECCEEECCCCC-CHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHCCHHHHHHHHHH
T ss_conf             9799987686897959-999999999739983663784565579886657728889467589999986699999999999


Q ss_pred             HHHHHHHCCCCCCCCE----EEEECCCC-----------------CCC----CCC-----CCCCHHHHHHCCCCCCCCCC
Q ss_conf             9999740212354433----66501223-----------------345----898-----53100112202686444421
Q gi|254780497|r   61 RDALHHAEMSVDDIDL----IIVATSTP-----------------DQT----FPS-----TAVNIQNRLGMKRGFAFDMQ  110 (324)
Q Consensus        61 ~~al~~a~~~~~~Id~----ii~~s~~~-----------------~~~----~p~-----~a~~i~~~LGl~~~~~~di~  110 (324)
                      .+||+++|+++.+++.    +++++...                 ...    .|.     .+.+|...+|++ .+++.++
T Consensus        83 ~~Al~dAGl~~~~~~~~r~Gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~-Gp~~tv~  161 (414)
T PRK08722         83 IQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHKALVEKGPRKISPFFVPSTIVNMIAGHMSIMRGLR-GPNIAIS  161 (414)
T ss_pred             HHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC-CCCCCCC
T ss_conf             999996289943246564479994056717779999999985486545842222457789999999983998-9872535


Q ss_pred             CCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCC-C----------C-----------CCCCC-CCCCCCCCCCCCEEEE
Q ss_conf             0122003467888998964155653167630224-3----------2-----------22456-6323234544312344
Q gi|254780497|r  111 AVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFS-R----------I-----------VDWSD-RSTCVLFGDGAGALIL  167 (324)
Q Consensus       111 ~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S-~----------~-----------~d~~d-~~~~~lfGDGAaA~ll  167 (324)
                      .+|+|++.||..|+.+|+.|..+.+++.++|... +          .           ..+.| ....+.+|+||+++||
T Consensus       162 tACsS~l~Ai~~A~~~I~~G~~d~aivGG~~~~~~p~~~~~f~~~~~ls~~~~~p~~~~rPFD~~rdG~v~gEGa~~~vL  241 (414)
T PRK08722        162 TACTTGLHNIGHAARMIAYGDADAMLAGGAEKASTPLGMGGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGMMVL  241 (414)
T ss_pred             CHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEE
T ss_conf             54078999999999998679857443277322038288999886531202589965465665579998353064218987


Q ss_pred             ECCCCCCCCCCC--CCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             026544654344--541012320355555617754876544433200103202444557777777888898740010001
Q gi|254780497|r  168 EGVEVKGSSMAD--TGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENI  245 (324)
Q Consensus       168 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~di  245 (324)
                      ++.+........  ..+.+.-..+|+..               ......++        ......++++|++++++++||
T Consensus       242 e~~~~A~~rGa~i~a~i~G~g~~~d~~~---------------~~~p~p~g--------~~~~~~m~~al~~agi~~~~I  298 (414)
T PRK08722        242 EEYEHAKARGAKIYAELVGFGMSGDAYH---------------MTSPSEDG--------SGGALAMEAAMRDAGITGEQI  298 (414)
T ss_pred             EEHHHHHHCCCCCEEEEEEEEECCCCCC---------------CCCCCCCH--------HHHHHHHHHHHHHCCCCHHHC
T ss_conf             0088898679974399987875368888---------------86679757--------999999999998749998788


Q ss_pred             CCCCCCCCCHHH-----HHHHHHHCCCC-HHHHH-H-HHHHHCCCHHHHHHHHHHH---HHHCCCCCC------------
Q ss_conf             210244444158-----99999971978-76733-6-5865193301269999999---998068899------------
Q gi|254780497|r  246 DWFVPHQANWRI-----INSIVDKMKIP-FDKVI-V-TVDIHGNTSAASIPLALAV---AVKEGRVKK------------  302 (324)
Q Consensus       246 d~~~~Hq~~~~~-----~~~~~~~lgl~-~e~~~-~-~~~~~Gn~~sas~~~~L~~---~~~~g~l~~------------  302 (324)
                      |++-.|-.+-..     .+.+.+.++-. .++++ . +=..+||+.+++=.+.+-.   +++++.+.|            
T Consensus       299 ~yI~aHGTgT~~gD~~E~~ai~~~fg~~~~~~~~v~S~Ks~iGH~~~AaG~~~~i~~~lal~~~~ippt~n~~~p~~~~~  378 (414)
T PRK08722        299 GYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLD  378 (414)
T ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf             66986358787759999999999966357897521470033022378889999999999996498189899999898888


Q ss_pred             -------------CCEEEEEEECCCCCEEEEEEE
Q ss_conf             -------------989999997145014568786
Q gi|254780497|r  303 -------------GDCLLLEAMGGGFTSGTVLLR  323 (324)
Q Consensus       303 -------------Gd~vll~~~G~G~s~~a~llr  323 (324)
                                   -.+++.-+||-|=+-.+++||
T Consensus       379 l~~~p~~~~~~~~~~~al~nsfGfGG~Na~lvl~  412 (414)
T PRK08722        379 IDLVPHTARKVEGMEYAICNSFGFGGTNGSLIFK  412 (414)
T ss_pred             CCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEE
T ss_conf             5358787766789848999670668222899999


No 53 
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.64  E-value=6.3e-14  Score=108.63  Aligned_cols=292  Identities=18%  Similarity=0.283  Sum_probs=163.2

Q ss_pred             CCEEEEEEEEEECCCCEECHHHH-HHHHC-CC-----HHHHHHCCCCCEEEEECCC---------------CCHHHHHHH
Q ss_conf             92269999999649841178899-98809-99-----8781102475188982898---------------899999999
Q gi|254780497|r    1 MIRSTVRGIGLSLPRRVLSNSDL-ESIVD-TS-----DGWIKRRVGISRRHIAGKD---------------ETTASLGEA   58 (324)
Q Consensus         1 M~~~~I~~~g~ylP~~~v~~~el-~~~~~-~~-----~~~i~~~~GI~~R~~~~~~---------------e~~~~la~~   58 (324)
                      |++|.|+|+|...|--. +.+++ +.... .+     +++.  ..|...+....++               ....-++..
T Consensus         1 mrrVvITG~G~vsp~G~-~~~e~w~~L~~G~sgi~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~r~~~~~~~~a~~   77 (406)
T PRK07967          1 MRRVVITGLGIVSSIGN-NQQEVLASLREGRSGITFSQEFA--ELGMRSQVWGNVKLDPEELIDRKVMRFMGDAAAYAYL   77 (406)
T ss_pred             CCEEEEECCEEECCCCC-CHHHHHHHHHCCCCCEEECCCCC--CCCCCCCEEEECCCCHHHCCCHHHHHCCCHHHHHHHH
T ss_conf             97199985437898829-99999999981999766688544--4599761677568893660898887027999999999


Q ss_pred             HHHHHHHHHCCCCCCCC----EEEEECCCCC------------------CCCC--------C-CCCCHHHHHHCCCCCCC
Q ss_conf             99999974021235443----3665012233------------------4589--------8-53100112202686444
Q gi|254780497|r   59 AARDALHHAEMSVDDID----LIIVATSTPD------------------QTFP--------S-TAVNIQNRLGMKRGFAF  107 (324)
Q Consensus        59 Aa~~al~~a~~~~~~Id----~ii~~s~~~~------------------~~~p--------~-~a~~i~~~LGl~~~~~~  107 (324)
                      |+++||+++|+++++++    -|+.++..+.                  ...|        + .+..+...+|++ .+++
T Consensus        78 Aa~eAl~dAGl~~~~~~~~r~Gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~a~~is~~~~l~-Gp~~  156 (406)
T PRK07967         78 AMEQAIADAGLSEDQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIK-GVNY  156 (406)
T ss_pred             HHHHHHHHCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC-CCCC
T ss_conf             999999975998245585654899927873188899999998741897622834899886668999999984899-9753


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC----------------------CCCCC-CCCCCCCCCCCCE
Q ss_conf             421012200346788899896415565316763022432----------------------22456-6323234544312
Q gi|254780497|r  108 DMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRI----------------------VDWSD-RSTCVLFGDGAGA  164 (324)
Q Consensus       108 di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~----------------------~d~~d-~~~~~lfGDGAaA  164 (324)
                      .+..+|++++.||..|..+|++|..+.+|+.++|..+..                      ..+.| ....+.+|+||++
T Consensus       157 tv~~aCas~~~Ai~~A~~~i~~G~~d~~i~GG~d~~~~~~~~~~~~~~~l~~~~~~~P~~~~rPFd~~r~G~v~gEGa~~  236 (406)
T PRK07967        157 SISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRDGFVIAGGGGV  236 (406)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf             54542127889999999999769978777144023575134467777777622477987675666688998414775799


Q ss_pred             EEEECCCCCCCCCCC--CCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             344026544654344--541012320355555617754876544433200103202444557777777888898740010
Q gi|254780497|r  165 LILEGVEVKGSSMAD--TGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTI  242 (324)
Q Consensus       165 ~ll~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~  242 (324)
                      +||++.+........  ..+.+....+|+                 ......++        +...+.++++|+..+   
T Consensus       237 lvLE~~e~A~~rGa~i~a~i~g~g~~~d~-----------------~~~~~p~~--------~g~~~~~~~al~~~~---  288 (406)
T PRK07967        237 VVVEELEHALARGAKIYAEIVGYGATSDG-----------------YDMVAPSG--------EGAVRCMQMALATVD---  288 (406)
T ss_pred             EEEHHHHHHHHCCCEEEEEEECCEECCCC-----------------CCCCCCCH--------HHHHHHHHHHHHCCC---
T ss_conf             86101688986899789999353431589-----------------88879878--------999999999982644---


Q ss_pred             CCCCCCCCCCCCHHH-----HHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH---HHHHCCCCC-------------
Q ss_conf             001210244444158-----99999971978767336586519330126999999---999806889-------------
Q gi|254780497|r  243 ENIDWFVPHQANWRI-----INSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALA---VAVKEGRVK-------------  301 (324)
Q Consensus       243 ~did~~~~Hq~~~~~-----~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~---~~~~~g~l~-------------  301 (324)
                      .|||++..|-.+-..     .+.+.+.++-..-.+-.+=..+||+..++=.+.+-   .+++++.+.             
T Consensus       289 ~~idyi~aHgtgt~~~D~~E~~Ai~~~fg~~~~~v~s~K~~~GH~~~aaGa~e~i~~~~al~~~~ippt~n~~~~dp~~~  368 (406)
T PRK07967        289 TPIDYINPHGTSTPVGDVKELGAIREVFGDKCPAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAA  368 (406)
T ss_pred             CCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf             34658995457687889999999999867789830166565456517679999999999996197289999899993224


Q ss_pred             ------------CCCEEEEEEEC-CCCCEEEEEEEC
Q ss_conf             ------------99899999971-450145687869
Q gi|254780497|r  302 ------------KGDCLLLEAMG-GGFTSGTVLLRW  324 (324)
Q Consensus       302 ------------~Gd~vll~~~G-~G~s~~a~llrw  324 (324)
                                  +-+++|.-+|| .|.....++=||
T Consensus       369 ~l~~v~~~~~~~~~~~al~nsfGFGG~Na~lvl~r~  404 (406)
T PRK07967        369 GMPIVTETTDNAKLTTVMSNSFGFGGTNATLVFRRY  404 (406)
T ss_pred             CCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEEE
T ss_conf             897568887678878899956148835489999643


No 54 
>PRK06364 consensus
Probab=99.64  E-value=7.7e-14  Score=108.10  Aligned_cols=254  Identities=20%  Similarity=0.249  Sum_probs=152.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC--CCCCCCCHHHHHHCC--CCCCCCCCCCCCCHHHHHHHH
Q ss_conf             9889999999999999974021235443366501223345--898531001122026--864444210122003467888
Q gi|254780497|r   48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQT--FPSTAVNIQNRLGMK--RGFAFDMQAVCSGFVYAVTTA  123 (324)
Q Consensus        48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~--~p~~a~~i~~~LGl~--~~~~~di~~~C~~~~~al~~A  123 (324)
                      ++.+..+|+.+|+++||+++|++|+|||.++.++......  ....+..++...|++  +.+++.++.+|+++..++..|
T Consensus        21 ~~~s~~~L~~eA~~~Al~dAgl~~~dID~v~~~~~~~g~~~~~~~~~~~~a~~~gl~~~~vp~~~V~~~caSG~~Ai~~A  100 (389)
T PRK06364         21 WDKSLRDLAVEAGLEAIKDANIYSKDLQMLYASNSLAGTINEQSNIAALAADFSGIAEEHVPAVRVEASTASGGAAVREA  100 (389)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHH
T ss_conf             99798999999999999880989899899988156665556524399999997599855886699887017899999999


Q ss_pred             HHHHHHCCCCCCEEEEECCCCCCC------------C--CC---------------------------------------
Q ss_conf             998964155653167630224322------------2--45---------------------------------------
Q gi|254780497|r  124 DSYIRSGVVRRVMVIGSDTFSRIV------------D--WS---------------------------------------  150 (324)
Q Consensus       124 ~~li~~g~~~~~Lvv~~e~~S~~~------------d--~~---------------------------------------  150 (324)
                      ...|++|..+.+|+++.|.+|...            +  |.                                       
T Consensus       101 ~~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~y~~~~g~~~e~~a~va~~~~~~  180 (389)
T PRK06364        101 YLAIKSGEYDVVMVGGVEKMTDIYGHEIIDVQSSILDREWESFNGATPAAMAAIIARRYMHDFNVEREAISMIAVNDHAN  180 (389)
T ss_pred             HHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf             99997297778999610003567776544445433330023303548999999999999999696999999999976563


Q ss_pred             ----------CCC------------------CCCCCCCCCCEEEEECCCCCCCCCC-CCCCEEEEEECCCCCCCCEEECC
Q ss_conf             ----------663------------------2323454431234402654465434-45410123203555556177548
Q gi|254780497|r  151 ----------DRS------------------TCVLFGDGAGALILEGVEVKGSSMA-DTGILSTYLCSDGSYIDKLYVDG  201 (324)
Q Consensus       151 ----------d~~------------------~~~lfGDGAaA~ll~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  201 (324)
                                ++.                  .+....|||+|+||.+.+....... ...++......+.     ...  
T Consensus       181 A~~nP~A~~r~~~t~e~vl~s~~i~~Pl~~~d~s~~~DGAaAvVl~s~e~a~~~~~~~v~i~~~~~~~~~-----~~~--  253 (389)
T PRK06364        181 ASRNPDAQYRNKITVKQVMNSDPVAEPLNVFDCSPISDGASAIILASEDFVKKNRKDGVRILSSAMAEDY-----LAL--  253 (389)
T ss_pred             HHHCCCCCCCCCCCHHHHHCCCCCCCCCCHHHCCCCCCCEEEEEEECHHHHHHCCCCCEEEEEEEEECCC-----CCC--
T ss_conf             7619601115776788862368767876074457788831799993389997568997599999996245-----555--


Q ss_pred             CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH----HHH----
Q ss_conf             765444332001032024445577777778888987400100012102444441589999997197876----733----
Q gi|254780497|r  202 GPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD----KVI----  273 (324)
Q Consensus       202 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~~----  273 (324)
                      +  ..+.          +  ..........+++|+++|++++|||.+-+|-+--..--.+.|.||+.++    ++.    
T Consensus       254 ~--~~~~----------~--~~~~~~~~A~~~A~~~AGl~~~DIDl~Ei~DaFa~~~l~~le~lG~~~~Ge~~~~~~~~~  319 (389)
T PRK06364        254 H--SRKS----------I--YTLESTKIAARLALDRAGIKSDDVSFLELNDSYSIYGLLELEDLGFAEKGKAKDLVYDEI  319 (389)
T ss_pred             C--CCCC----------C--CCCCCHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHCCCC
T ss_conf             7--7786----------5--445408999999999819997886177522655499999999809998773144315874


Q ss_pred             -------HH----HHHHCCCHHHHHHHHHHHHHHC-------CCCCCCCEEEEEEEC-CCCCEEEEEE
Q ss_conf             -------65----8651933012699999999980-------688999899999971-4501456878
Q gi|254780497|r  274 -------VT----VDIHGNTSAASIPLALAVAVKE-------GRVKKGDCLLLEAMG-GGFTSGTVLL  322 (324)
Q Consensus       274 -------~~----~~~~Gn~~sas~~~~L~~~~~~-------g~l~~Gd~vll~~~G-~G~s~~a~ll  322 (324)
                             .|    +--+||-..++=...+.++..+       .+++.-.+.|....| .|.+....+|
T Consensus       320 ~~~G~~pvN~~GG~la~Ghp~gatG~~~~~ea~~QLrg~ag~rQv~~a~~al~~~~gG~g~~~~v~il  387 (389)
T PRK06364        320 KLNGRLPVNPSGGLKAKGNPLGATGVSQFVEAYLQLKGKAGQRQVKSARYGLLHNMAGTGATSVVHIV  387 (389)
T ss_pred             CCCCCCEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEEEEEE
T ss_conf             46998437388178767993006799999999999702110346788669998167744210799996


No 55 
>PRK08768 consensus
Probab=99.64  E-value=3.9e-14  Score=109.96  Aligned_cols=298  Identities=20%  Similarity=0.240  Sum_probs=166.5

Q ss_pred             CC-EEEEEEEEEECCCCEECHHHH-HHHH-CCCHH-HHHH--CCCCCEE-----------EEECCC-----CCHHHHHHH
Q ss_conf             92-269999999649841178899-9880-99987-8110--2475188-----------982898-----899999999
Q gi|254780497|r    1 MI-RSTVRGIGLSLPRRVLSNSDL-ESIV-DTSDG-WIKR--RVGISRR-----------HIAGKD-----ETTASLGEA   58 (324)
Q Consensus         1 M~-~~~I~~~g~ylP~~~v~~~el-~~~~-~~~~~-~i~~--~~GI~~R-----------~~~~~~-----e~~~~la~~   58 (324)
                      |+ +|.|+|+|...|--. +.+++ .... +.+.- .+.+  ..+...+           .+..+.     .....++..
T Consensus         1 M~rrVvITGmG~vtp~G~-~~~~~w~~L~~G~s~i~~~~~~d~~~~~~~~~g~i~~fd~~~~~~~~~~~~~d~~~~~~l~   79 (411)
T PRK08768          1 MSRRVVVTGMGMVSPLGN-DLATSWDGIVHGRSGIGPITQIDASQFTTKIAGEIKNFDPTLFVSAKDVKKMDSFIHYGVG   79 (411)
T ss_pred             CCCCEEEECCEEECCCCC-CHHHHHHHHHCCCCCEECCCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHCCHHHHHHHH
T ss_conf             989899987677897969-9999999998089855407756631487776554588792554899999756999999999


Q ss_pred             HHHHHHHHHCCCCCCCCE----EEEECCCCC-----------------CCCC---------CCCCCHHHHHHCCCCCCCC
Q ss_conf             999999740212354433----665012233-----------------4589---------8531001122026864444
Q gi|254780497|r   59 AARDALHHAEMSVDDIDL----IIVATSTPD-----------------QTFP---------STAVNIQNRLGMKRGFAFD  108 (324)
Q Consensus        59 Aa~~al~~a~~~~~~Id~----ii~~s~~~~-----------------~~~p---------~~a~~i~~~LGl~~~~~~d  108 (324)
                      |+++||+++|+++++++.    +++++....                 ...|         ..+.+|...+|++ .+++.
T Consensus        80 aa~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~g~~-Gp~~t  158 (411)
T PRK08768         80 ASFMALDDSGLEINESNAERVGAILGSGIGGLLGIEEQTIKFHEGGARKISPFYVPSTIINMLPGQVSLIKGLK-GPTFS  158 (411)
T ss_pred             HHHHHHHHHCCCHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC-CCCCC
T ss_conf             99999774189900147655279992266653027899999985685546822556667668999999981998-97625


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCC-C---------------------CCCCC-CCCCCCCCCCCCEE
Q ss_conf             2101220034678889989641556531676302243-2---------------------22456-63232345443123
Q gi|254780497|r  109 MQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSR-I---------------------VDWSD-RSTCVLFGDGAGAL  165 (324)
Q Consensus       109 i~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~-~---------------------~d~~d-~~~~~lfGDGAaA~  165 (324)
                      +..+|++++.||..|+.+|++|+.+.+++.++|.... .                     ..+.| ....+.+|+||+++
T Consensus       159 v~taCaS~l~Al~~A~~~i~~G~~d~~ivgg~~~~~~p~~~~~f~~l~~ls~~~~~P~~~~rPFd~~rdG~v~gEGa~~~  238 (411)
T PRK08768        159 AVSACATSNHSIGTAMRMIQHGDADVMLAGGAERGSSPSSVGGFCAMKAMSTRNDDPTGASRPWDKQRDGFVLGDGAGVL  238 (411)
T ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCEEEEE
T ss_conf             35411378899999999986788674552642021587889999986545203789887666665799986866804899


Q ss_pred             EEECCCCCCCCCC--CCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             4402654465434--45410123203555556177548765444332001032024445577777778888987400100
Q gi|254780497|r  166 ILEGVEVKGSSMA--DTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIE  243 (324)
Q Consensus       166 ll~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~  243 (324)
                      +|++.+.......  ...+.+.-..+|+..          ..     ....++        ......++++|++++++++
T Consensus       239 vLe~~e~A~~rga~i~a~i~g~~~~~d~~~----------~~-----~p~~~~--------~~~~~~~~~al~~a~~~~~  295 (411)
T PRK08768        239 VLEEYEHAKARGARIYAELVGFGASSDAFH----------MT-----APSEDG--------EGAARSMAAAMRDAKLNPE  295 (411)
T ss_pred             EECCHHHHHHCCCCEEEEEEEEEECCCCCC----------CC-----CCCCCH--------HHHHHHHHHHHHHCCCCCC
T ss_conf             971488898679907899977876147888----------87-----889777--------9999999999997698931


Q ss_pred             CCCCCCCCCCCHHH-----HHHHHHHCCCCHHHH-H-HHHHHHCCCHHHHHHHHHHH---HHHCCCCCC-----------
Q ss_conf             01210244444158-----999999719787673-3-65865193301269999999---998068899-----------
Q gi|254780497|r  244 NIDWFVPHQANWRI-----INSIVDKMKIPFDKV-I-VTVDIHGNTSAASIPLALAV---AVKEGRVKK-----------  302 (324)
Q Consensus       244 did~~~~Hq~~~~~-----~~~~~~~lgl~~e~~-~-~~~~~~Gn~~sas~~~~L~~---~~~~g~l~~-----------  302 (324)
                      |||++-.|-.+-..     .+.+.+.++=...+. + .+=..+||+.+++=.+.+..   +++.+.+.|           
T Consensus       296 ~i~yi~aHgtgT~~~D~~E~~ai~~~fg~~~~~~~i~s~Ks~~GH~~~aaG~~~~~~~~l~l~~~~ippt~n~~~p~~~~  375 (411)
T PRK08768        296 QIGYLNAHGTSTPLGDLAETMAMKRALGDHAYKTMVSSTKSMTGHLLGAAGGVEAIFSVMALHTGIIPPTINLEEPSEGC  375 (411)
T ss_pred             CEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf             02489967566755399999999998567899874789445543208999999999999997169739999999999889


Q ss_pred             -------------CCEEEEEEECCCCCEEEEEEE
Q ss_conf             -------------989999997145014568786
Q gi|254780497|r  303 -------------GDCLLLEAMGGGFTSGTVLLR  323 (324)
Q Consensus       303 -------------Gd~vll~~~G~G~s~~a~llr  323 (324)
                                   -..++.-+||=|=+-.+++||
T Consensus       376 ~l~~v~~~~~~~~~~~al~nsfGfGG~Na~lvl~  409 (411)
T PRK08768        376 DLDYVPNVAREVQVDAVMSNGFGFGGTNGTLVFK  409 (411)
T ss_pred             CCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEE
T ss_conf             8544899766687788999671177010899998


No 56 
>TIGR03150 fabF 3-oxoacyl-[acyl-carrier-protein] synthase 2. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.63  E-value=6.8e-14  Score=108.44  Aligned_cols=297  Identities=20%  Similarity=0.286  Sum_probs=166.8

Q ss_pred             CEEEEEEEEEECCCCEECHHHHHH-HHC-CCH-HHHHH--CCCCCEEE---EE--CCCC-----------CHHHHHHHHH
Q ss_conf             226999999964984117889998-809-998-78110--24751889---82--8988-----------9999999999
Q gi|254780497|r    2 IRSTVRGIGLSLPRRVLSNSDLES-IVD-TSD-GWIKR--RVGISRRH---IA--GKDE-----------TTASLGEAAA   60 (324)
Q Consensus         2 ~~~~I~~~g~ylP~~~v~~~el~~-~~~-~~~-~~i~~--~~GI~~R~---~~--~~~e-----------~~~~la~~Aa   60 (324)
                      .+|.|+|+|.-+|.-. +.+++-+ ... .+. ..+.+  ..+...+.   +.  ++.+           ...-++.+++
T Consensus         1 rrVaItG~g~~~P~g~-~~~~~w~~L~~g~s~i~~~~~~d~~~~~~~~~g~v~~fd~~~~i~~~~a~~~dp~~~l~l~aa   79 (407)
T TIGR03150         1 RRVVVTGLGAVTPLGN-GVEEFWENLLAGKSGIGPITRFDASDLPVKIAGEVKDFDPEDYIDKKEARRMDRFIQYALAAA   79 (407)
T ss_pred             CEEEEEECEEECCCCC-CHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEECCCCHHHCCCHHHHHHCCHHHHHHHHHH
T ss_conf             9399984677897979-999999999739974443687786468775677727889466589999975199999999999


Q ss_pred             HHHHHHHCCCCCCCC----EEEEECCCC-----------------CCC----CCC-----CCCCHHHHHHCCCCCCCCCC
Q ss_conf             999974021235443----366501223-----------------345----898-----53100112202686444421
Q gi|254780497|r   61 RDALHHAEMSVDDID----LIIVATSTP-----------------DQT----FPS-----TAVNIQNRLGMKRGFAFDMQ  110 (324)
Q Consensus        61 ~~al~~a~~~~~~Id----~ii~~s~~~-----------------~~~----~p~-----~a~~i~~~LGl~~~~~~di~  110 (324)
                      .+||+++|+.+++++    .|++++...                 ...    .|.     .+++|...+|++ .+++.+.
T Consensus        80 ~~Al~dAG~~~~~~~~~~~gv~~gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~is~~~~l~-Gp~~tv~  158 (407)
T TIGR03150        80 KEAVEDSGLDIEEEDAERVGVIVGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAK-GPNHAVV  158 (407)
T ss_pred             HHHHHHCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCC
T ss_conf             999986399844528664599992576745779999999985384445854015766258999999985999-9644644


Q ss_pred             CCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC-CC---------------------CCC-CCCCCCCCCCCCCCCEEEE
Q ss_conf             012200346788899896415565316763022-43---------------------222-4566323234544312344
Q gi|254780497|r  111 AVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF-SR---------------------IVD-WSDRSTCVLFGDGAGALIL  167 (324)
Q Consensus       111 ~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~-S~---------------------~~d-~~d~~~~~lfGDGAaA~ll  167 (324)
                      .+|+|++.||..|..+|++|+.+.+||.++|.. ++                     ... |+.....+.+|+||+++||
T Consensus       159 taCsSsl~Al~~A~~~i~~G~~d~aivGG~~~~l~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~a~G~v~gEGa~~vvL  238 (407)
T TIGR03150       159 TACATGTHAIGDAFRLIQYGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDRDGFVMGEGAGVLVL  238 (407)
T ss_pred             CHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf             44389999999999998739854655037443579899999998877730678987776542247997445484578740


Q ss_pred             ECCCCCCCCCCC--CCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             026544654344--541012320355555617754876544433200103202444557777777888898740010001
Q gi|254780497|r  168 EGVEVKGSSMAD--TGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENI  245 (324)
Q Consensus       168 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~di  245 (324)
                      ++.+........  ..+.+.-..+|+..          ...     ...++        ......++++|++++++++||
T Consensus       239 e~~~~A~~~g~~I~a~i~g~g~~~d~~~----------~t~-----~~p~~--------~~~~~~i~~al~~agi~~~~I  295 (407)
T TIGR03150       239 EELEHAKARGAKIYAEIVGYGMSGDAYH----------ITA-----PAPEG--------EGAARAMRAALKDAGINPEDV  295 (407)
T ss_pred             CCHHHHHHCCCEEEEEEEEEEEECCCCC----------CCC-----CCCCC--------HHHHHHHHHHHHHHCCCCCCE
T ss_conf             6699998779968999821055015887----------646-----59981--------678889999999868998633


Q ss_pred             CCCCCCCCCHHH-----HHHHHHHCCCCHHHH-H-HHHHHHCCCHHHHHHHHHHH---HHHCCCCCC-------------
Q ss_conf             210244444158-----999999719787673-3-65865193301269999999---998068899-------------
Q gi|254780497|r  246 DWFVPHQANWRI-----INSIVDKMKIPFDKV-I-VTVDIHGNTSAASIPLALAV---AVKEGRVKK-------------  302 (324)
Q Consensus       246 d~~~~Hq~~~~~-----~~~~~~~lgl~~e~~-~-~~~~~~Gn~~sas~~~~L~~---~~~~g~l~~-------------  302 (324)
                      |++-.|-.+-..     .+.+.+.++=...++ + .+=..+||+..++=.+.+-.   .++.+.+.|             
T Consensus       296 ~yIe~Hgtgt~~~D~~E~~al~~~fg~~~~~~~i~S~K~~~GH~~~AaG~~~lik~~l~l~~~~ipp~~n~~~~~~~~~~  375 (407)
T TIGR03150       296 DYINAHGTSTPLGDKAETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECDL  375 (407)
T ss_pred             EEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf             49997368787769999999999862568986578855554314899999999999999825963898998999999984


Q ss_pred             -----------CCEEEEEEECCCCCEEEEEEE
Q ss_conf             -----------989999997145014568786
Q gi|254780497|r  303 -----------GDCLLLEAMGGGFTSGTVLLR  323 (324)
Q Consensus       303 -----------Gd~vll~~~G~G~s~~a~llr  323 (324)
                                 -.+++..+||-|=+-.+++||
T Consensus       376 ~~v~~~~~~~~~~~al~~sfGfGG~Na~~vl~  407 (407)
T TIGR03150       376 DYVPNEARERKIDYALSNSFGFGGHNASLVFK  407 (407)
T ss_pred             CCCCCCCCCCCCCEEEEECCCCCCEEEEEEEC
T ss_conf             51889886788899999672367354899969


No 57 
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=99.63  E-value=7.1e-14  Score=108.30  Aligned_cols=102  Identities=19%  Similarity=0.145  Sum_probs=78.8

Q ss_pred             EEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC--CCCCCHHH-HHHCCCCCCCCCCCCCCCHHHH
Q ss_conf             89828988999999999999997402123544336650122334589--85310011-2202686444421012200346
Q gi|254780497|r   43 RHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFP--STAVNIQN-RLGMKRGFAFDMQAVCSGFVYA  119 (324)
Q Consensus        43 R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p--~~a~~i~~-~LGl~~~~~~di~~~C~~~~~a  119 (324)
                      |++..++.+..+|+.+|+++||+++|++|+|||.|++++..++....  .....+.. ..++....++-++.+|+++..+
T Consensus        17 r~~~~~~~~~~~L~~eA~~~Al~dAGl~~~dID~v~~G~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~v~~~caSG~~A   96 (408)
T PRK06289         17 RNWTKEGRDFADLTREVVDGTLAAAGIDADDIGVVHVGNFFGELFAGQGHLGAMPATVHPALWGTPASRHEAACASGSVA   96 (408)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCHHHHHH
T ss_conf             78887899999999999999999849998998999997415643445102566788764212588614463523899999


Q ss_pred             HHHHHHHHHHCCCCCCEEEEECCCC
Q ss_conf             7888998964155653167630224
Q gi|254780497|r  120 VTTADSYIRSGVVRRVMVIGSDTFS  144 (324)
Q Consensus       120 l~~A~~li~~g~~~~~Lvv~~e~~S  144 (324)
                      +..|...|++|.++.+|+++.|.++
T Consensus        97 ~~~A~~~I~sG~~dvvla~G~e~ms  121 (408)
T PRK06289         97 TLAAIADLRSGAYDVALVVGLELEK  121 (408)
T ss_pred             HHHHHHHHHCCCCCEEEEEEEEECC
T ss_conf             9999999974888779998888626


No 58 
>PRK08371 consensus
Probab=99.62  E-value=1.1e-13  Score=107.09  Aligned_cols=274  Identities=19%  Similarity=0.259  Sum_probs=160.5

Q ss_pred             CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf             92269999999649841178899988099987811024751889828988999999999999997402123544336650
Q gi|254780497|r    1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVA   80 (324)
Q Consensus         1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~   80 (324)
                      |.+|.|.|++.- |-.                          |+   .+.+..+|+.+|++++|+++|++  +||.++++
T Consensus         1 M~~v~IVg~~~T-p~g--------------------------r~---~~~~~~~L~~ea~~~Al~dAgi~--~iD~v~~g   48 (388)
T PRK08371          1 MEKVIIVGVGMT-PVG--------------------------EH---WRTSLRDLAVEAILKAMDDAGID--KVDSLYVG   48 (388)
T ss_pred             CCCEEEEEEEEC-CCE--------------------------EC---CCCCHHHHHHHHHHHHHHHCCCC--HHHEEEEE
T ss_conf             981899996034-444--------------------------48---99898999999999999980998--33348991


Q ss_pred             CCCCCCC--CCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC--------
Q ss_conf             1223345--898531001122026864444210122003467888998964155653167630224322245--------
Q gi|254780497|r   81 TSTPDQT--FPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWS--------  150 (324)
Q Consensus        81 s~~~~~~--~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~--------  150 (324)
                      +..+...  ....+..++..+|+++..+..++.+|+|++.++..|...|++|..+.+|+++.|.+|+.....        
T Consensus        49 ~~~~~~~~~~~~~~~~~a~~~Gl~~vp~~~v~~~caSg~~Ai~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~  128 (388)
T PRK08371         49 NMASGSFIEQENLGALIADWAGLGNIPAVKVEAACASGGAAVQEGAKAVLSGLEDVVLVVGVEKMTDAWPSDATRYLAYA  128 (388)
T ss_pred             CCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCC
T ss_conf             35654222132399999997599998624666735789999999999998288988999867534678887530001245


Q ss_pred             -CCC------------------------------------------------------------------------CCCC
Q ss_conf             -663------------------------------------------------------------------------2323
Q gi|254780497|r  151 -DRS------------------------------------------------------------------------TCVL  157 (324)
Q Consensus       151 -d~~------------------------------------------------------------------------~~~l  157 (324)
                       |..                                                                        .+..
T Consensus       129 ~d~~~~~~~g~~~~~~~al~a~~~~~~yg~t~e~~a~vav~~~~~A~~np~A~~~~~~t~e~~~~s~~i~~pl~~~d~s~  208 (388)
T PRK08371        129 ADAEWELFHGASFVALNALIMRLYMNTYGYTEEDLALFAVNAHANGAKNPYAMFKRPITVETVMKSPYIADPLKLFDASP  208 (388)
T ss_pred             CCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCHHHHCCCC
T ss_conf             44440210483777789999999999958998883799996707676097560368865889614775457166634687


Q ss_pred             CCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             45443123440265446543445410123203555556177548765444332001032024445577777778888987
Q gi|254780497|r  158 FGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDS  237 (324)
Q Consensus       158 fGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~  237 (324)
                      ..|||+|+||.+.+..... ....-...++...+...+...+.      .....+          .........+++|++
T Consensus       209 ~~DGAaAvvl~s~e~A~~~-g~~~~~~v~~~g~g~~~~~~~~~------~~~d~~----------~~~~~~~A~~~al~~  271 (388)
T PRK08371        209 VCDGAAAVIITSPEKAKEL-GVPKDKWVEVAGMGRAIDTINLA------NREDLL----------TLKAAKIAAEKAYKM  271 (388)
T ss_pred             CCCCHHHHHHCCHHHHHHC-CCCCCEEEEEEEEEECCCCCCCC------CCCCCC----------CCCHHHHHHHHHHHH
T ss_conf             7560687762389999865-99965289999998535655556------676333----------464599999999998


Q ss_pred             HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH----HH------------HHH----HHHHCCCHHHH---HHHHHHHH
Q ss_conf             400100012102444441589999997197876----73------------365----86519330126---99999999
Q gi|254780497|r  238 THLTIENIDWFVPHQANWRIINSIVDKMKIPFD----KV------------IVT----VDIHGNTSAAS---IPLALAVA  294 (324)
Q Consensus       238 ~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~------------~~~----~~~~Gn~~sas---~~~~L~~~  294 (324)
                      +|++++|||.+-+|-+--...-...+.|||.+.    ++            +.|    .--+||-..++   ....+.+-
T Consensus       272 AGl~~~DIDv~Ei~daFa~~~l~~le~lGl~~~Ge~~~~~~~g~~~~~G~~pvN~~GG~ls~Ghp~GatG~~~~~e~v~Q  351 (388)
T PRK08371        272 AGVEPKDIDFFEVHDAFTVMAALSLEALGVAEKGKGAKLAKEGQIAIDGDYPIQTMGGLKARGHPVGATGVYQTVEAVLQ  351 (388)
T ss_pred             CCCCHHHCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCHHHCCCCCCHHHHHHHHHHHHH
T ss_conf             49998889477531433588999999849997882677886588456999628588169765986247799999999999


Q ss_pred             HHC----C-CCCCCCEEEEEEECC-CCCEEEEEEE
Q ss_conf             980----6-889998999999714-5014568786
Q gi|254780497|r  295 VKE----G-RVKKGDCLLLEAMGG-GFTSGTVLLR  323 (324)
Q Consensus       295 ~~~----g-~l~~Gd~vll~~~G~-G~s~~a~llr  323 (324)
                      ++.    + +++.-+..|..+.|. |-....+++|
T Consensus       352 Lrg~ag~~~qv~~a~~~l~~~~gG~~~~~~v~il~  386 (388)
T PRK08371        352 LRGEAPNGIQVPDAEVGLTQNIGGTGSNITVTILR  386 (388)
T ss_pred             HHHHCCCCCCCCCCCEEEEECCCCCHHHEEEEEEE
T ss_conf             86200667226888699993567613428999997


No 59 
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=99.62  E-value=2.5e-14  Score=111.24  Aligned_cols=100  Identities=17%  Similarity=0.147  Sum_probs=85.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC-CCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             898899999999999999740212354433665012233-45898531001122026-8644442101220034678889
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPD-QTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTAD  124 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~-~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~  124 (324)
                      -.+.++.+|++.+++.+|++++++|++||.+++++..+. ...+..+..+.-..|++ ..+++.|+..|+|++.|+..|.
T Consensus        21 l~~~~~~~L~a~ai~~~l~r~~i~p~~Id~vi~G~v~~~g~~~~n~aR~~~L~aGlp~~vpa~tVn~~CaSGl~Av~~A~  100 (382)
T PRK07801         21 LAGVHPADLGAHVLRGLVDRNDIDPAAVDDVIFGCVDAIGPQAGNIARTSWLAAGYPEEVPGVTVDRQCGSSQQAIHFAA  100 (382)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHH
T ss_conf             79999999999999999998097989989899971666566556799999997699988864888412158999999999


Q ss_pred             HHHHHCCCCCCEEEEECCCCCC
Q ss_conf             9896415565316763022432
Q gi|254780497|r  125 SYIRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       125 ~li~~g~~~~~Lvv~~e~~S~~  146 (324)
                      ..|++|..+.+|+++.|.+|+.
T Consensus       101 ~~I~~G~~dv~lagGvEsMS~~  122 (382)
T PRK07801        101 QAIMSGTADVIVAGGVQNMSQI  122 (382)
T ss_pred             HHHCCCCCCEEEECCEEECCCC
T ss_conf             8862899674665154322557


No 60 
>PRK06158 thiolase; Provisional
Probab=99.60  E-value=2.5e-13  Score=104.81  Aligned_cols=248  Identities=18%  Similarity=0.163  Sum_probs=150.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             89889999999999999974021235443366501223345898531001122026864444210122003467888998
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSY  126 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~l  126 (324)
                      .++.+..+|+.+|+++||+++|++|+|||.+++++...  .  .....+.+.||+++.....+..+|+++..++..|...
T Consensus        23 ~~~~s~~eL~~eA~~~Al~DAGi~~~dID~~~~g~~~~--~--~~g~~~a~~lGl~~~~~~~~~~ggas~~~al~~A~~a   98 (384)
T PRK06158         23 APGLSAMELLAQAAVRALADAGLTMADVDGLFTASPDS--A--LWGLSVAEYLGIRPRFVDGTMIGGSSFVSHLLPAALA   98 (384)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCC--C--CHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHH
T ss_conf             89979999999999999997599999909899971576--6--5399999982999812436666868999999999999


Q ss_pred             HHHCCCCCCEEEEECCCCCC-------CC---------------------------------------------------
Q ss_conf             96415565316763022432-------22---------------------------------------------------
Q gi|254780497|r  127 IRSGVVRRVMVIGSDTFSRI-------VD---------------------------------------------------  148 (324)
Q Consensus       127 i~~g~~~~~Lvv~~e~~S~~-------~d---------------------------------------------------  148 (324)
                      |++|.++.+||+..+..+..       .+                                                   
T Consensus        99 I~sG~~d~vlV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~~~Al~a~rym~~yG~t~E~lA~vavk~r~nA~~NP~  178 (384)
T PRK06158         99 LEAGLCDVALICYGSNQRSAGGKLVSMLDPQPYEAPYKPVNPVTAYALAAARHMHQYGTTREQLAEVAVAARQWAQLNPE  178 (384)
T ss_pred             HHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf             98588538999523555556655433568744443235554688999999999999798899999999999998706986


Q ss_pred             --CCCCC------------------CCCCCCCCCCEEEEECCCCCCCCCCCCCC--EEEEEECCCCCCCCEEECCCCCCC
Q ss_conf             --45663------------------23234544312344026544654344541--012320355555617754876544
Q gi|254780497|r  149 --WSDRS------------------TCVLFGDGAGALILEGVEVKGSSMADTGI--LSTYLCSDGSYIDKLYVDGGPSTS  206 (324)
Q Consensus       149 --~~d~~------------------~~~lfGDGAaA~ll~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  206 (324)
                        +..+-                  -+...+|||+|+||.+.+... ...+..+  ...-..++.               
T Consensus       179 A~~r~~it~edvl~s~~Ia~PL~l~dc~~~sDGAaAvVl~s~e~Ar-~l~~~pV~i~g~g~~~~~---------------  242 (384)
T PRK06158        179 AFMRDPLTIDDVLAARMVSDPLSVRDCCLVTDGAGAVVMVRADRAR-DLPRPPVYVLGAAAATWH---------------  242 (384)
T ss_pred             CCCCCCCCHHHHHCCCCCCCCHHHCCCCCCCCCEEEEEEECHHHHH-HCCCCCEEEEEEEEECCC---------------
T ss_conf             3137887999972153545660011466566634899995288884-479995799999986168---------------


Q ss_pred             CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH----HHH---------
Q ss_conf             4332001032024445577777778888987400100012102444441589999997197876----733---------
Q gi|254780497|r  207 RTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD----KVI---------  273 (324)
Q Consensus       207 ~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~~---------  273 (324)
                        ......  ..+   .........+++++++|++++|||.+-+|-.-...--.+.|.||+-+.    +++         
T Consensus       243 --~~~~~~--~d~---~~~~~~~aa~~A~~~AGi~p~DiDvaev~D~Ft~~~l~~~E~lG~~~~Ge~~~~v~~G~~~~~G  315 (384)
T PRK06158        243 --RQISSM--PDL---TVTAAAESGPRAFAMAGVTPADIDVVELYDAFTINTILFLEDLGFCAKGEGGAFVEGGRIAPGG  315 (384)
T ss_pred             --CCCCCC--CCC---CHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCC
T ss_conf             --764335--521---0279999999999980999777878864177608899999984999898469999779956799


Q ss_pred             ---HH----HHHHCCCHHHHHHHHHHHHHHC-------CCCCCCCEEEEEEEC-CCCCEEEEEE
Q ss_conf             ---65----8651933012699999999980-------688999899999971-4501456878
Q gi|254780497|r  274 ---VT----VDIHGNTSAASIPLALAVAVKE-------GRVKKGDCLLLEAMG-GGFTSGTVLL  322 (324)
Q Consensus       274 ---~~----~~~~Gn~~sas~~~~L~~~~~~-------g~l~~Gd~vll~~~G-~G~s~~a~ll  322 (324)
                         .|    +--+||.+.. =+..+.++.++       .+++.-+..|..+.| .+.+..+++|
T Consensus       316 ~~PvN~sGGlls~GhpGat-G~~~~~E~~~QLrG~ag~rQV~~a~~al~~~~GG~~~~~~~~vL  378 (384)
T PRK06158        316 RLPVNTNGGGLSCVHPGMY-GLFLIIEAVRQLRGEAGERQVAGAEVALAHGNGGVLSSQATAIL  378 (384)
T ss_pred             CEEECCCCHHHCCCCCHHH-HHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEE
T ss_conf             7415379701238996177-99999999999617756675898778999688862211599998


No 61 
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.60  E-value=3e-14  Score=110.73  Aligned_cols=99  Identities=18%  Similarity=0.221  Sum_probs=84.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             98899999999999999740212354433665012233458985310011220268-64444210122003467888998
Q gi|254780497|r   48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTADSY  126 (324)
Q Consensus        48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~~l  126 (324)
                      ++.++.+|+..+++++|++++++|++||.||++.+.+...-+..+.++.=..|++. ..++.|+..|.|++.|+..|...
T Consensus        27 ~~~~~~~L~a~~i~~~l~r~~~~~~~Id~vi~G~~~~~g~g~n~aR~~~L~aGlp~~vpa~tVnr~C~SGl~Ai~~a~~~  106 (397)
T PRK06954         27 ASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHDM  106 (397)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHH
T ss_conf             89999999999999999873989899798999823655656649999999769998887788726658999999999999


Q ss_pred             HHHCCCCCCEEEEECCCCCC
Q ss_conf             96415565316763022432
Q gi|254780497|r  127 IRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       127 i~~g~~~~~Lvv~~e~~S~~  146 (324)
                      |++|..+.+|+++.|.+|+.
T Consensus       107 I~sG~~dvvlagGvEsmS~~  126 (397)
T PRK06954        107 LVAGSVDVIVAGGMESMTNA  126 (397)
T ss_pred             HHCCCCCEEEEECCCCCCCC
T ss_conf             96799745676334456767


No 62 
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.59  E-value=1.8e-13  Score=105.73  Aligned_cols=291  Identities=16%  Similarity=0.223  Sum_probs=158.3

Q ss_pred             CCEEEEEEEEEECCCCEECHHHHHH-HH-CCCHHH-HHHCCCCCEEE----EECCCC------------CHHHHHHHHHH
Q ss_conf             9226999999964984117889998-80-999878-11024751889----828988------------99999999999
Q gi|254780497|r    1 MIRSTVRGIGLSLPRRVLSNSDLES-IV-DTSDGW-IKRRVGISRRH----IAGKDE------------TTASLGEAAAR   61 (324)
Q Consensus         1 M~~~~I~~~g~ylP~~~v~~~el~~-~~-~~~~~~-i~~~~GI~~R~----~~~~~e------------~~~~la~~Aa~   61 (324)
                      |++|.|+|+|..-|-- .+.+++-+ .. +.+... +.+.-......    +.++++            ....++..|++
T Consensus         2 m~rVvITGiGivsplG-~~~~~~w~~L~~G~s~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~~l~~~~~R~~~~a~~A~~   80 (395)
T PRK09185          2 MTPVYITAFGATSALG-AGLDAILAALRAGRASGMRPCDFGWLPLPTWVGEVDGVDLPALPAALADFDCRNNRLALLALQ   80 (395)
T ss_pred             CCCEEEECHHHCCCCC-CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCHHHHHHHHHHH
T ss_conf             9869994620048780-899999999984898764676666557882278746855443727776323577799999999


Q ss_pred             H---HHHHH--CCCCCCCCEEEEECCC------------------C-CCCC----C-CCCCCHHHHHHCCCCCCCCCCCC
Q ss_conf             9---99740--2123544336650122------------------3-3458----9-85310011220268644442101
Q gi|254780497|r   62 D---ALHHA--EMSVDDIDLIIVATST------------------P-DQTF----P-STAVNIQNRLGMKRGFAFDMQAV  112 (324)
Q Consensus        62 ~---al~~a--~~~~~~Id~ii~~s~~------------------~-~~~~----p-~~a~~i~~~LGl~~~~~~di~~~  112 (324)
                      +   ++..+  ..+++.+++++-.+..                  | ++..    | +.+..|+..+|++ .+++.++.+
T Consensus        81 ~~~~a~~~a~~~~~~~riGvviGts~gg~~~~e~~~~~~~~~~~~p~~~~~~~~~~~~~a~~Ia~~~gl~-Gp~~t~~~A  159 (395)
T PRK09185         81 QIEPAVEAAIARYGADRIGVVLGTSTSGILEGEEAYARRDPHGAFPADFHYAQQELGSPADFLRAYLGLS-GPAYTISTA  159 (395)
T ss_pred             HHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCEEECCC
T ss_conf             9999985205334987689999547011899999999972379888751100025014999999996898-963200144


Q ss_pred             CCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC---------------CCCCCC-CCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf             2200346788899896415565316763022432---------------224566-323234544312344026544654
Q gi|254780497|r  113 CSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRI---------------VDWSDR-STCVLFGDGAGALILEGVEVKGSS  176 (324)
Q Consensus       113 C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~---------------~d~~d~-~~~~lfGDGAaA~ll~~~~~~~~~  176 (324)
                      |++++.||..|+++|+.|..+.+++.++|..++.               .++.|+ ...+.+|+||++++||+.+.....
T Consensus       160 CaSg~~Ai~~A~~~I~~G~~d~~i~Gg~d~l~~~~~~~f~~~~~ls~~~~rPFd~~r~G~v~gEGa~~~vLE~~~~a~~~  239 (395)
T PRK09185        160 CSSSAKVFASARRLLEAGLCDAVIVGGVDSLCRLTLNGFNSLESLSPGPCQPFSANRDGINIGEAAAFFLLRPATRDDAA  239 (395)
T ss_pred             CCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECEEEEEEECHHHCCCCC
T ss_conf             60899999999999985998889980212245520578776422466788765579997365056899997455629997


Q ss_pred             CCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
Q ss_conf             34454101232035555561775487654443320010320244455777777788889874001000121024444415
Q gi|254780497|r  177 MADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWR  256 (324)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~  256 (324)
                         ..+......+|+.+.               .....+|        ......++++|++++++++||||+..|-.+-.
T Consensus       240 ---~~~~G~~~~~da~~~---------------~~p~p~g--------~g~~~am~~Al~~a~~~~~di~yv~aHgtgT~  293 (395)
T PRK09185        240 ---VLLLGVGESSDAHHM---------------SAPHPEG--------LGARLAMQAALADAGLEAADIGYINLHGTATP  293 (395)
T ss_pred             ---EEEEEEEECCCCCCC---------------CCCCCCH--------HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCC
T ss_conf             ---899998851677777---------------7889888--------99999999999973999343666996167686


Q ss_pred             H-----HHHHHHHCCCCHHHH-H-HHHHHHCCCHHHHHHH----HHHHHHHCCCCC------------------------
Q ss_conf             8-----999999719787673-3-6586519330126999----999999806889------------------------
Q gi|254780497|r  257 I-----INSIVDKMKIPFDKV-I-VTVDIHGNTSAASIPL----ALAVAVKEGRVK------------------------  301 (324)
Q Consensus       257 ~-----~~~~~~~lgl~~e~~-~-~~~~~~Gn~~sas~~~----~L~~~~~~g~l~------------------------  301 (324)
                      .     .+.+.+.+|   ++. + .+=..+||+-.++=.+    .+-.+.+++.+.                        
T Consensus       294 ~~D~~E~~Ai~~vfg---~~~pvss~Ks~~GH~lgaaG~~e~~~~~l~l~~~~~iPpt~n~~~~dp~~~~~~v~~~~~~~  370 (395)
T PRK09185        294 LNDAMESRAVAAVFG---DTVPCSSTKPLTGHTLGAAGAVEAAICWLALNRDLPLPGHVNDGQPDPALPPLYLVENRQAL  370 (395)
T ss_pred             CCCHHHHHHHHHHHC---CCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             658999999999848---88624676411043078899999999999998289859989999989888765468887568


Q ss_pred             CCCEEEEEEEC-CCCCEEEEEEE
Q ss_conf             99899999971-45014568786
Q gi|254780497|r  302 KGDCLLLEAMG-GGFTSGTVLLR  323 (324)
Q Consensus       302 ~Gd~vll~~~G-~G~s~~a~llr  323 (324)
                      +-+.+|.-+|| .|... +++|+
T Consensus       371 ~~~~~l~nsfGFGG~Na-~lvl~  392 (395)
T PRK09185        371 ALRYVMSNSFAFGGSNC-SLIFG  392 (395)
T ss_pred             CCCEEEEECCCCCCEEE-EEEEE
T ss_conf             98899995614883626-89984


No 63 
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=99.57  E-value=8.7e-14  Score=107.75  Aligned_cols=100  Identities=21%  Similarity=0.201  Sum_probs=84.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHH-CCCCCCCCEEEEECCCCCCCC-CCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             898899999999999999740-212354433665012233458-985310011220268644442101220034678889
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHA-EMSVDDIDLIIVATSTPDQTF-PSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTAD  124 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a-~~~~~~Id~ii~~s~~~~~~~-p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~  124 (324)
                      -++.++.||+..+++.+|++. +++|++||-||++++.+.... ...+..+.-..|++..+++.|+..|.|++.|+..|.
T Consensus        22 l~~~~~~~L~a~~i~~~l~r~~~l~p~~Id~Vi~G~~~~~g~~g~n~aR~aaL~aGl~~vpa~TVnr~C~SGl~Ai~~aa  101 (405)
T PRK07851         22 LVDMRPDDLAAQMVRAALDKVPALDPHDIDDLMLGCGLPGGESGFNIARVVAVLLGYDFLPGTTVNRYCSSSLQTTRMAF  101 (405)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHH
T ss_conf             89999999999999999986679798998989998377546432309999999739999863457560205799999999


Q ss_pred             HHHHHCCCCCCEEEEECCCCCC
Q ss_conf             9896415565316763022432
Q gi|254780497|r  125 SYIRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       125 ~li~~g~~~~~Lvv~~e~~S~~  146 (324)
                      ..|++|..+-+|+.+.|.+|+.
T Consensus       102 ~~I~~G~~dvvlAGGvEsMS~~  123 (405)
T PRK07851        102 HAIKAGEGDAFISAGVETVSRF  123 (405)
T ss_pred             HHHHCCCCCEEEEECCCCCCCC
T ss_conf             9997699998999681715567


No 64 
>PRK07491 consensus
Probab=99.57  E-value=7.4e-14  Score=108.21  Aligned_cols=100  Identities=19%  Similarity=0.259  Sum_probs=85.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             89889999999999999974021235443366501223345898531001122026-86444421012200346788899
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADS  125 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~  125 (324)
                      -++.++.+|+..+++.+|+|++++|++||-||++++.+.-.-+..+..+.-..|++ ...++.|+..|+|++.++..|..
T Consensus        22 l~~~~~~~L~~~~i~~~l~r~~l~~~~Id~Vi~G~v~~~g~g~n~aR~~~L~aGlp~~vp~~tVnr~C~SGl~Ai~~Aa~  101 (392)
T PRK07491         22 FANTPAHELGAVAIKAALERAGVDAADVSEVILGQVLTAGQGQNPARQASIKAGLPQESPAWGINQLCGSGLRAVALGAQ  101 (392)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHH
T ss_conf             79999999999999999987197989989899994575565561999999976989888648980603457789999999


Q ss_pred             HHHHCCCCCCEEEEECCCCCC
Q ss_conf             896415565316763022432
Q gi|254780497|r  126 YIRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       126 li~~g~~~~~Lvv~~e~~S~~  146 (324)
                      .|++|..+-+|+.+.|.+|+.
T Consensus       102 ~I~~G~~dvvlagGvEsmS~~  122 (392)
T PRK07491        102 QIANGDAKIVVAGGQESMSMA  122 (392)
T ss_pred             HHCCCCCCEEEEECCCCCCCC
T ss_conf             865898646776324423556


No 65 
>PRK08041 consensus
Probab=99.57  E-value=8.5e-14  Score=107.80  Aligned_cols=100  Identities=17%  Similarity=0.210  Sum_probs=86.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             898899999999999999740212354433665012233458985310011220268-6444421012200346788899
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTADS  125 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~~  125 (324)
                      -.+.++.||+..+++.+|+|++++|++||-||+++..+....+..+..+.-..|++. ..++.|+..|.|++.|+..|..
T Consensus        21 l~~~~~~~L~a~~ik~~l~r~gi~~~~ID~vi~G~v~~~g~g~n~aR~~al~aGlp~~vpa~tVnr~C~SGl~Ai~~Aa~  100 (391)
T PRK08041         21 LARHSAVELGSLVVKALIERTGVPAYAVDEVILGQVLTAGAGQNPARQSAIKGGLPNSVSAITINDVCGSGLKALHLATQ  100 (391)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHH
T ss_conf             78999999999999999998198989989899980576565665999999976999888717875165687899999999


Q ss_pred             HHHHCCCCCCEEEEECCCCCC
Q ss_conf             896415565316763022432
Q gi|254780497|r  126 YIRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       126 li~~g~~~~~Lvv~~e~~S~~  146 (324)
                      .|++|..+.+|+.+.|.+|+.
T Consensus       101 ~I~~G~~dvvlagGvEsmS~~  121 (391)
T PRK08041        101 AIQCGEADIVIAGGQENMSRA  121 (391)
T ss_pred             HHHCCCCCEEEEEEEECCCCC
T ss_conf             986799766777412214658


No 66 
>PRK06363 consensus
Probab=99.57  E-value=5.5e-13  Score=102.66  Aligned_cols=201  Identities=20%  Similarity=0.216  Sum_probs=128.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC--CCCCCCHHHHHHCCC--CCCCCCCCCCCCHHHHHHHHH
Q ss_conf             8899999999999999740212354433665012233458--985310011220268--644442101220034678889
Q gi|254780497|r   49 DETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTF--PSTAVNIQNRLGMKR--GFAFDMQAVCSGFVYAVTTAD  124 (324)
Q Consensus        49 ~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~--p~~a~~i~~~LGl~~--~~~~di~~~C~~~~~al~~A~  124 (324)
                      +.+..+|+.+|++.+|++++++|+|||.+++++.+.+...  ...+..++..+|+..  .++..++.+|++++.++..|.
T Consensus        19 ~~s~~~L~~ea~~~Al~dAgl~~~dID~v~~g~~~~~~~~~~~~~~~~~a~~~Gl~~~~vp~~~v~~~C~SG~~Ai~~Aa   98 (387)
T PRK06363         19 ERSFRDLIVEAGIKAIEDANVSGEDIDAMYVGNMSGGRFVGQEHIGALIADYAGLNTLPIPATRVEAACASGGLALRQAV   98 (387)
T ss_pred             CCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHH
T ss_conf             97989999999999999809798999999998257543446130999999973998887654888663179999999999


Q ss_pred             HHHHHCCCCCCEEEEECCCCCCCCCC------------CCC---------------------------------------
Q ss_conf             98964155653167630224322245------------663---------------------------------------
Q gi|254780497|r  125 SYIRSGVVRRVMVIGSDTFSRIVDWS------------DRS---------------------------------------  153 (324)
Q Consensus       125 ~li~~g~~~~~Lvv~~e~~S~~~d~~------------d~~---------------------------------------  153 (324)
                      ..|++|.++.+|+.+.|.+|+.-+..            .+.                                       
T Consensus        99 ~~I~sG~~dvvlagG~E~ms~~~~~~~~~~~~~d~~~~~~~g~~~~~~~a~~a~~~~~~yG~tre~~a~~A~~s~~~A~~  178 (387)
T PRK06363         99 LAVASGYHDIVLAAGVEKMTDVGDATSALATAADREWEAFVGATFPSLYAMIAKRHMHEYGTTREQLAQVAVKNHENGAK  178 (387)
T ss_pred             HHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
T ss_conf             99974998689996013677887655422224453520013775189999999999999796999999999981664542


Q ss_pred             ----------------------------CCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCC
Q ss_conf             ----------------------------2323454431234402654465434454101232035555561775487654
Q gi|254780497|r  154 ----------------------------TCVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPST  205 (324)
Q Consensus       154 ----------------------------~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (324)
                                                  .+....|||+|+||.+.+.... .....+   +...-+...+...+..   .
T Consensus       179 np~a~~~~~~t~d~~~~~~~i~~pl~~~d~s~~sDGAaAvvl~s~e~A~~-~~~~pv---~i~g~~~~~~~~~~~~---~  251 (387)
T PRK06363        179 NPYAQFRNEITVDQVLNSSMVADPLRLLDCSPVSDGAAAVIVCPAEKARE-YTDTPI---YIKASAQASDTIALHD---R  251 (387)
T ss_pred             CCCCCCCCCCCHHHHCCCCCCCCCCHHHHCCCCCCCCEEEEECCHHHHHH-CCCCCE---EEEEEEEEECCCCCCC---C
T ss_conf             85001578754755226665666531555246688834899715999986-599957---9999999835544567---8


Q ss_pred             CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCH
Q ss_conf             4433200103202444557777777888898740010001210244444158999999719787
Q gi|254780497|r  206 SRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPF  269 (324)
Q Consensus       206 ~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~  269 (324)
                       +  ...          ........++++++++|++++|||.+=+|-+-...--...+.||+.+
T Consensus       252 -~--~~~----------~~~~~~~a~~~a~~~AGl~~~DiD~~Ei~eaFa~~~l~~~e~lGl~~  302 (387)
T PRK06363        252 -K--DIT----------TLDATVVASKKAYEMAGLTPKDIDVAEVHDCFTIAELCAIEDLGFCK  302 (387)
T ss_pred             -C--CCC----------CCCHHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHHHHHHHCCCCC
T ss_conf             -8--644----------57716999999999849998887576411101688999999819985


No 67 
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.57  E-value=9.9e-14  Score=107.40  Aligned_cols=98  Identities=15%  Similarity=0.162  Sum_probs=80.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHC-CCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             988999999999999997402123544336650122334589853100112202-6864444210122003467888998
Q gi|254780497|r   48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGM-KRGFAFDMQAVCSGFVYAVTTADSY  126 (324)
Q Consensus        48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl-~~~~~~di~~~C~~~~~al~~A~~l  126 (324)
                      ....+.||+.+|++.+|+++|++|++||.||+++..+.......+.++.-..|+ ...+++.|+.+|+|++.|+..|...
T Consensus        19 ~~~~a~eL~~~ai~~al~~agi~~~~Id~vi~G~~~~~g~g~n~ar~~~l~ag~~~~vp~~tV~~~CaSG~~Ai~~A~~~   98 (393)
T cd00826          19 ANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQEAPAIGMNNLCGSGLRALALAMQL   98 (393)
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf             78999999999999999982969899898999925875555419999999759998997688768478999999999999


Q ss_pred             HHHCCCCCCEEEEECCCCC
Q ss_conf             9641556531676302243
Q gi|254780497|r  127 IRSGVVRRVMVIGSDTFSR  145 (324)
Q Consensus       127 i~~g~~~~~Lvv~~e~~S~  145 (324)
                      |++|..+.+|+++.|.+|.
T Consensus        99 I~sG~~dvvlagGvEsms~  117 (393)
T cd00826          99 IAGGDANCILAGGFEKMET  117 (393)
T ss_pred             HHCCCCCEEEEEEEEECCC
T ss_conf             9769999899950550676


No 68 
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=99.56  E-value=6.4e-14  Score=108.60  Aligned_cols=100  Identities=18%  Similarity=0.185  Sum_probs=87.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             898899999999999999740212354433665012233458985310011220268-6444421012200346788899
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTADS  125 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~~  125 (324)
                      -.+.++.+|+..+++.+|++++++|++||.||++++.+...-+..+.++.-..|++. ..++.|+..|+|++.|+..|..
T Consensus        21 l~~~~~~~L~~~~i~~~l~~~gl~~~~Id~vi~G~v~~~~~g~n~ar~~al~aGlp~~vp~~tVnr~C~Sgl~Ai~~A~~  100 (388)
T PRK06366         21 FSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAAR  100 (388)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf             68899899999999999987198989989899995275455651999999975999888658885725599999999999


Q ss_pred             HHHHCCCCCCEEEEECCCCCC
Q ss_conf             896415565316763022432
Q gi|254780497|r  126 YIRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       126 li~~g~~~~~Lvv~~e~~S~~  146 (324)
                      .|++|..+.+|+.+.|.+|+.
T Consensus       101 ~I~sG~~dvviagGvEsMS~~  121 (388)
T PRK06366        101 EIMLGERDLVIAGGMENMSNA  121 (388)
T ss_pred             HHHCCCCCEEEEECCCCCCCC
T ss_conf             996699876787042214578


No 69 
>PRK07124 consensus
Probab=99.56  E-value=3.5e-14  Score=110.30  Aligned_cols=99  Identities=24%  Similarity=0.285  Sum_probs=87.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             9889999999999999974021235443366501223345898531001122026-864444210122003467888998
Q gi|254780497|r   48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADSY  126 (324)
Q Consensus        48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~l  126 (324)
                      .+.++.||+.++++++|++++++|++||.||+++..+....+..+.++.-..|++ ..+++.|+..|+|++.|+..|...
T Consensus        22 ~~~~~~~L~~~ai~~al~~~~i~~~~Id~vi~G~v~~~g~g~n~ar~~al~aGlp~~iP~~tV~~aCaSG~~Ai~~A~~~  101 (402)
T PRK07124         22 KSVPAGELAGVAIKGALEQAKVSPEAIDEVIVGNVVSAGQGMGPGRQAAIFAGIPEEVPAYSLNMVCGSGMKTVMDAVSH  101 (402)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHH
T ss_conf             89999999999999999983989899998999934755556679999999769998885699725778999999999999


Q ss_pred             HHHCCCCCCEEEEECCCCCC
Q ss_conf             96415565316763022432
Q gi|254780497|r  127 IRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       127 i~~g~~~~~Lvv~~e~~S~~  146 (324)
                      |++|.++.+|+++.|.+|+.
T Consensus       102 I~sG~~dvvlagGvEsmS~~  121 (402)
T PRK07124        102 IKAGDAEVVVAAGVEVMSQI  121 (402)
T ss_pred             HHCCCCCEEEECCEECCCCC
T ss_conf             86799767896551015667


No 70 
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.56  E-value=9.4e-13  Score=101.14  Aligned_cols=293  Identities=20%  Similarity=0.232  Sum_probs=163.7

Q ss_pred             EEEEEEEEEECCCCE--ECHHHH-HHHHCCCHHH--HHH-CCCCCEEEEEC-------CC---------CCHHHHHHHHH
Q ss_conf             269999999649841--178899-9880999878--110-24751889828-------98---------89999999999
Q gi|254780497|r    3 RSTVRGIGLSLPRRV--LSNSDL-ESIVDTSDGW--IKR-RVGISRRHIAG-------KD---------ETTASLGEAAA   60 (324)
Q Consensus         3 ~~~I~~~g~ylP~~~--v~~~el-~~~~~~~~~~--i~~-~~GI~~R~~~~-------~~---------e~~~~la~~Aa   60 (324)
                      +|.|+|+|...|--.  -+.+++ .....-....  +.+ .... .+++..       +.         ....-|+.+++
T Consensus         2 RVvItGiG~~~P~G~g~~~~~~fW~~L~~G~s~i~~~~~~~~~~-~~~~~g~v~~~~~~~~~~~~~~~~d~~~~~~l~aa   80 (407)
T cd00828           2 RVVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLKSRF-DRGVAGQIPTGDIPGWDAKRTGIVDRTTLLALVAT   80 (407)
T ss_pred             CEEEEECEEECCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCC-CCEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHH
T ss_conf             29998171889798898999999999976997645898554678-72386647887735589889874599999999999


Q ss_pred             HHHHHHHCCCCC------CCCEEEEECCCCC-----------------CCC------C-CCCCCHHHHHHCCCCCCCCCC
Q ss_conf             999974021235------4433665012233-----------------458------9-853100112202686444421
Q gi|254780497|r   61 RDALHHAEMSVD------DIDLIIVATSTPD-----------------QTF------P-STAVNIQNRLGMKRGFAFDMQ  110 (324)
Q Consensus        61 ~~al~~a~~~~~------~Id~ii~~s~~~~-----------------~~~------p-~~a~~i~~~LGl~~~~~~di~  110 (324)
                      ++||+++|+++.      ++. |++++...+                 +..      | ..++++...+++.+.+++.+.
T Consensus        81 ~~Al~dAGl~~~~~~~~~r~g-v~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~~Gp~~tv~  159 (407)
T cd00828          81 EEALADAGITDPYEVHPSEVG-VVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLSSHGPIKTPV  159 (407)
T ss_pred             HHHHHHCCCCCHHHCCCCCEE-EEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCEE
T ss_conf             999996799964552787669-9999677438889988776554058732502301422488999998587889852650


Q ss_pred             CCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC---------------------CCCCC-CCCCCCCCCCCCEEEEE
Q ss_conf             012200346788899896415565316763022432---------------------22456-63232345443123440
Q gi|254780497|r  111 AVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRI---------------------VDWSD-RSTCVLFGDGAGALILE  168 (324)
Q Consensus       111 ~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~---------------------~d~~d-~~~~~lfGDGAaA~ll~  168 (324)
                      .+|+|++.||..|+.+|++|+++.+++.++|..+..                     ..+.| ....+..|+||+++||+
T Consensus       160 tACaSsl~Ai~~A~~~I~~G~~d~aivGg~~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~rdG~v~gEGa~~lvLe  239 (407)
T cd00828         160 GACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDETRDGFVEAEGAGVLVLE  239 (407)
T ss_pred             CHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEECCCCEEEEEE
T ss_conf             35079999999996662368514466431223563667999874454227899887513036678986834852177650


Q ss_pred             CCCCCCCCCC--CCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             2654465434--45410123203555556177548765444332001032024445577777778888987400100012
Q gi|254780497|r  169 GVEVKGSSMA--DTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENID  246 (324)
Q Consensus       169 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did  246 (324)
                      +.+.......  ...+......+|+...                .....        .+...+.++++|++++++++||+
T Consensus       240 ~~~~A~~rg~~i~a~i~g~~~~~dg~~~----------------~~~~~--------~~~~~~~~~~Al~~A~i~~~~i~  295 (407)
T cd00828         240 RAELALARGAPIYGRVAGTASTTDGAGR----------------SVPAG--------GKGIARAIRTALAKAGLSLDDLD  295 (407)
T ss_pred             EHHHHHHCCCEEEEEECCEEEECCCCCC----------------CCCCC--------CHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             4866766889799964364786689888----------------77986--------26789999999997199954563


Q ss_pred             CCCCCCCCHHH-----HHHHHHHCCCCHHHH--HHHHHHHCCCHHHHHHHHHHHHH---HCCCCCC--------------
Q ss_conf             10244444158-----999999719787673--36586519330126999999999---8068899--------------
Q gi|254780497|r  247 WFVPHQANWRI-----INSIVDKMKIPFDKV--IVTVDIHGNTSAASIPLALAVAV---KEGRVKK--------------  302 (324)
Q Consensus       247 ~~~~Hq~~~~~-----~~~~~~~lgl~~e~~--~~~~~~~Gn~~sas~~~~L~~~~---~~g~l~~--------------  302 (324)
                      ++-.|-.+-..     .+.+.+.++-..++.  -.+=..+||+.+++=.+.+-..+   +.+.+.|              
T Consensus       296 yI~aHgtgT~~gD~~E~~Al~~~f~~~~~~~~i~S~K~~~GH~~~aaG~~~li~~~l~l~~~~ippt~n~~~~~p~~~~~  375 (407)
T cd00828         296 VISAHGTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVEHL  375 (407)
T ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf             89951676866699999999998621378870445012303167899999999999998439719999989999765613


Q ss_pred             ------------CCEEEEEEECCCCCEEEEE
Q ss_conf             ------------9899999971450145687
Q gi|254780497|r  303 ------------GDCLLLEAMGGGFTSGTVL  321 (324)
Q Consensus       303 ------------Gd~vll~~~G~G~s~~a~l  321 (324)
                                  -++++..+||-|-+-.+++
T Consensus       376 ~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lv  406 (407)
T cd00828         376 SVVGLSRDLNLKVRAALVNAFGFGGSNAALV  406 (407)
T ss_pred             CCCCCCCCCCCCCCEEEEECCCCCCEEEEEE
T ss_conf             3777687688999799997835680507896


No 71 
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.54  E-value=2.7e-12  Score=98.23  Aligned_cols=250  Identities=20%  Similarity=0.181  Sum_probs=150.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC--CCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             988999999999999997402123544336650122334589--853100112202686444421012200346788899
Q gi|254780497|r   48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFP--STAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADS  125 (324)
Q Consensus        48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p--~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~  125 (324)
                      ++.+..+|+.+|+++||+++|++|+|||.+++++. ++....  .....+.+.||+.....+.+..+|+++..+++.|..
T Consensus        21 ~~~s~~~L~~eA~~~Al~DAGl~~~dID~~~~g~~-~~~~~g~~~~~~~~~~~lG~~~~p~~~v~~~~asg~~a~~~A~~   99 (391)
T PRK08313         21 QDVSMAGLVREAIDRALADAGLTFDDIDAVVVGKA-PDFFEGVMMPELFLADAIGATGKPLIRVHTAGSVGGSTAVVAAS   99 (391)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECC-CCCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHH
T ss_conf             99799999999999999974999899899999765-76455543557899997078788437882531789999999999


Q ss_pred             HHHHCCCCCCEEEEECCCCCCC------------------------------------------------------C---
Q ss_conf             8964155653167630224322------------------------------------------------------2---
Q gi|254780497|r  126 YIRSGVVRRVMVIGSDTFSRIV------------------------------------------------------D---  148 (324)
Q Consensus       126 li~~g~~~~~Lvv~~e~~S~~~------------------------------------------------------d---  148 (324)
                      .|++|.++.+|+++.|..+..-                                                      |   
T Consensus       100 aI~sG~~d~vlv~g~ek~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~a~rym~~yG~t~E~lA~Vav~~r~~A~~NP~A  179 (391)
T PRK08313        100 LVQSGKYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRRSGAPTHIGAMVAVKDRLNGAKNPYA  179 (391)
T ss_pred             HHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf             99748877899987403577654210147874203244766999999999999986989999999999999876119730


Q ss_pred             -CCCCC--------C-----------CCCCCCCCCEEEEECCCCCCCCCC---CCC-CEEEEEECCCCCCCCEEECCCCC
Q ss_conf             -45663--------2-----------323454431234402654465434---454-10123203555556177548765
Q gi|254780497|r  149 -WSDRS--------T-----------CVLFGDGAGALILEGVEVKGSSMA---DTG-ILSTYLCSDGSYIDKLYVDGGPS  204 (324)
Q Consensus       149 -~~d~~--------~-----------~~lfGDGAaA~ll~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~  204 (324)
                       +..+.        +           +....|||+|+||.+.+.......   ... +...-..++.     ..      
T Consensus       180 ~~r~~~lt~edvl~s~~Ia~PL~l~dc~~~sDGAaAvVl~s~e~a~~~~~~~~~~~~i~g~~~~~~~-----~~------  248 (391)
T PRK08313        180 HLHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADARVAEGHPVAWIHGTALRTEP-----LA------  248 (391)
T ss_pred             CCCCCCCCHHHCCCCCEEECCCCHHHCCCCCCCCEEEEEECHHHHHHCCCCCCCEEEEEEEEEECCC-----CC------
T ss_conf             0058999888803686475687503018989864799995399997524578972999999986588-----76------


Q ss_pred             CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCCCCCCCCCCHHHHHHHHHHCCCCHH----HHHH----
Q ss_conf             44433200103202444557777777888898740010--0012102444441589999997197876----7336----
Q gi|254780497|r  205 TSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTI--ENIDWFVPHQANWRIINSIVDKMKIPFD----KVIV----  274 (324)
Q Consensus       205 ~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~--~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~~~----  274 (324)
                       ......+.          ........+++++++|+++  +|||.+-+|-.--...-...|.||+-+.    +++.    
T Consensus       249 -~~~~d~~~----------~~~~~~aa~~a~~~Agi~~P~~DiDvaevyD~Ft~~~l~~lE~lGfc~~Ge~~~~v~~G~~  317 (391)
T PRK08313        249 -FAGRDQVN----------PQAGRDAAAALWKAAGITDPIDEIDVAEIYVPFSWFEPMWLENLGFAPEGEGWKLTEAGET  317 (391)
T ss_pred             -CCCCCCCC----------CHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHCCCC
T ss_conf             -45566455----------0899999999999759999510164788615643899999998399888826999977894


Q ss_pred             -------------HHHHHCCCHHHHHHHHHHHHHHC--C-----CCCCCCEEEEEEECCCCCEEEEEE
Q ss_conf             -------------58651933012699999999980--6-----889998999999714501456878
Q gi|254780497|r  275 -------------TVDIHGNTSAASIPLALAVAVKE--G-----RVKKGDCLLLEAMGGGFTSGTVLL  322 (324)
Q Consensus       275 -------------~~~~~Gn~~sas~~~~L~~~~~~--g-----~l~~Gd~vll~~~G~G~s~~a~ll  322 (324)
                                   .+. -+.++ ++=...+.++.++  |     +++.-...|.-+.|.|.+..++.+
T Consensus       318 ~~~G~lPvNtsGGlls-g~p~g-a~G~~~v~Ea~~QLrG~Ag~rQV~~a~~al~~~~GG~~~~~~v~i  383 (391)
T PRK08313        318 AIGGRLPVNPSGGVLS-SNPIG-ASGMIRFAEAALQVMGKAGEHQVPGARKALGHAYGGGSQFFSMWV  383 (391)
T ss_pred             CCCCCCCEECCCCHHC-CCCCC-HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEEEE
T ss_conf             6799844508972330-89872-679999999999965776566489751899955677121699999


No 72 
>PRK09051 beta-ketothiolase; Provisional
Probab=99.54  E-value=2e-13  Score=105.49  Aligned_cols=100  Identities=20%  Similarity=0.249  Sum_probs=84.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC-CCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHH
Q ss_conf             898899999999999999740212354433665012233458-985310011220268-644442101220034678889
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTF-PSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTAD  124 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~-p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~  124 (324)
                      -.+.++.||+..+++.+|++++++|++||-||++++.+...- +..+....-..|++. ..++.|+..|.|++.++..|.
T Consensus        22 l~~~~~~~L~a~~i~~~l~r~~i~p~~Id~Vi~G~v~~~g~~~~niaR~aal~aGlp~~vp~~tVnr~C~SGl~Ai~~Aa  101 (394)
T PRK09051         22 LKDFAPTDLGAIVVREALARAGVDGDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPALNVNRLCGSGLQAIVSAA  101 (394)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHH
T ss_conf             78998899999999999987198989989799992355676676789999997699988871887155477899999999


Q ss_pred             HHHHHCCCCCCEEEEECCCCCC
Q ss_conf             9896415565316763022432
Q gi|254780497|r  125 SYIRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       125 ~li~~g~~~~~Lvv~~e~~S~~  146 (324)
                      ..|++|..+.+|+.+.|.+|+.
T Consensus       102 ~~I~~G~~d~viAGGvEsmS~~  123 (394)
T PRK09051        102 QAILLGDADVAIGGGAESMSRA  123 (394)
T ss_pred             HHHHCCCCCEEEEECCHHCCCC
T ss_conf             9997699887787241020358


No 73 
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.54  E-value=1.8e-12  Score=99.33  Aligned_cols=288  Identities=20%  Similarity=0.262  Sum_probs=162.0

Q ss_pred             CCEEEEEEEEEECCCCEECHHHH-HHHHCCCHHHHHHCCCCCE-----------EE---EE--------CCC-----CCH
Q ss_conf             92269999999649841178899-9880999878110247518-----------89---82--------898-----899
Q gi|254780497|r    1 MIRSTVRGIGLSLPRRVLSNSDL-ESIVDTSDGWIKRRVGISR-----------RH---IA--------GKD-----ETT   52 (324)
Q Consensus         1 M~~~~I~~~g~ylP~~~v~~~el-~~~~~~~~~~i~~~~GI~~-----------R~---~~--------~~~-----e~~   52 (324)
                      |++|.|+|+|...|--. +.+++ +....       -++||..           +.   +.        ++.     ...
T Consensus         1 MrRVvITGiG~vsp~G~-~~e~~w~~L~~-------G~sgi~~~~~~d~~~~~~~~ag~v~~fd~~~~~~~~~~~~~dr~   72 (405)
T PRK08439          1 MKRVVVTGMGMINSLGL-DKESSFKAICN-------GECGIKKITLFDASDFPVKIAGEITDFDPTEVMDPKEVKKADRF   72 (405)
T ss_pred             CCCEEEECCEEECCCCC-CHHHHHHHHHC-------CCCCEEECCCCCCCCCCCEEEEEECCCCHHHCCCHHHHHHHCHH
T ss_conf             97199973134798718-99999999983-------99977748876766897418998388795673899999862899


Q ss_pred             HHHHHHHHHHHHHHHCCCC----CCCCEEEEECCCCC-----------------CCCC----C-----CCCCHHHHHHCC
Q ss_conf             9999999999997402123----54433665012233-----------------4589----8-----531001122026
Q gi|254780497|r   53 ASLGEAAARDALHHAEMSV----DDIDLIIVATSTPD-----------------QTFP----S-----TAVNIQNRLGMK  102 (324)
Q Consensus        53 ~~la~~Aa~~al~~a~~~~----~~Id~ii~~s~~~~-----------------~~~p----~-----~a~~i~~~LGl~  102 (324)
                      ..++..|+++||+++|+..    +.+.. ++++....                 ...|    .     .+.+|...+|++
T Consensus        73 ~~lal~aa~eAl~dAGl~~~~~~~r~Gv-~~gt~~g~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~a~~is~~~~~~  151 (405)
T PRK08439         73 IQLGLKAAREAMKDAGFLEEHDKDRFGV-SSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLK  151 (405)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCEEE-EEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             9999999999998448775577566799-998667755779999999984697644802767888889999999983998


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC-CC----------C-----------CCCCCC-CCCCCCC
Q ss_conf             86444421012200346788899896415565316763022-43----------2-----------224566-3232345
Q gi|254780497|r  103 RGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF-SR----------I-----------VDWSDR-STCVLFG  159 (324)
Q Consensus       103 ~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~-S~----------~-----------~d~~d~-~~~~lfG  159 (324)
                       .+++.++.+|++++.||..|..+|+.|..+.++|+++|.. ++          .           ..+.|+ ...+..|
T Consensus       152 -Gp~~tv~tACass~~Ai~~A~~~I~~G~~d~~ivgG~~~~l~~~~~~~f~~~~~ls~~~~~P~~~~rPFD~~r~G~v~g  230 (405)
T PRK08439        152 -GPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFASMKALSTRNDDPKKASRPFDKDRDGFVMG  230 (405)
T ss_pred             -CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf             -9765626375899999999999997089776774150220273568999875323025889654667876899847742


Q ss_pred             CCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             44312344026544654344541012320355555617754876544433200103202444557777777888898740
Q gi|254780497|r  160 DGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTH  239 (324)
Q Consensus       160 DGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~g  239 (324)
                      +||+++||++.+......  ..+...... .+...+     +       .+....+        .....+.++++|+++|
T Consensus       231 EGa~~lvLe~~~~A~~rg--a~i~a~i~G-~~~~~d-----~-------~~~t~P~--------~~g~~~a~~~Al~~ag  287 (405)
T PRK08439        231 EGAGALVLEEYESAKKRG--AKIYAELIG-FGESGD-----A-------NHITSPA--------PDGPLRAMKKALEMAG  287 (405)
T ss_pred             CCEEEEEECCHHHHHHCC--CEEEEEEEE-ECCCCC-----C-------CCCCCCC--------HHHHHHHHHHHHHHCC
T ss_conf             467889724488786579--968999998-767668-----8-------8998989--------8999999999999759


Q ss_pred             CCCCCCCCCCCCCCCHH-----HHHHHHHHCCCCHHH--HHHHHHHHCCCHHHHHHHHHH---HHHHCCCCCC-------
Q ss_conf             01000121024444415-----899999971978767--336586519330126999999---9998068899-------
Q gi|254780497|r  240 LTIENIDWFVPHQANWR-----IINSIVDKMKIPFDK--VIVTVDIHGNTSAASIPLALA---VAVKEGRVKK-------  302 (324)
Q Consensus       240 l~~~did~~~~Hq~~~~-----~~~~~~~~lgl~~e~--~~~~~~~~Gn~~sas~~~~L~---~~~~~g~l~~-------  302 (324)
                      ++  +||++-.|-.+-.     -.+.+.+.++-....  +-.+=..+||+-.++=.+.+.   .+++++.+.|       
T Consensus       288 ~~--~idyi~aHgTgT~~gD~~E~~Ai~~vfg~~~~~~~v~S~Ks~iGH~~gAaG~~e~i~~~lal~~g~ippt~n~~~~  365 (405)
T PRK08439        288 NP--KVDYVNAHGTSTPYNDKNETAALKELFGSKENVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETP  365 (405)
T ss_pred             CC--CEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             99--6117972057687878999999999856667788865731000323666789999999999964955898999999


Q ss_pred             -----------------CCEEEEEEECCCCCEEEEEEE
Q ss_conf             -----------------989999997145014568786
Q gi|254780497|r  303 -----------------GDCLLLEAMGGGFTSGTVLLR  323 (324)
Q Consensus       303 -----------------Gd~vll~~~G~G~s~~a~llr  323 (324)
                                       -+.++--+||=|=+-.+++||
T Consensus       366 dp~~~l~~v~~~~~~~~~~~al~nSFGFGG~Na~lvl~  403 (405)
T PRK08439        366 DPECDLDYIPNIARKADLKAVMSNSFGFGGTNGVVIFK  403 (405)
T ss_pred             CCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEE
T ss_conf             98898212789765688789999660477267899998


No 74 
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.53  E-value=1.9e-12  Score=99.20  Aligned_cols=254  Identities=19%  Similarity=0.163  Sum_probs=153.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC--CCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             988999999999999997402123544336650122334589--853100112202686444421012200346788899
Q gi|254780497|r   48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFP--STAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADS  125 (324)
Q Consensus        48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p--~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~  125 (324)
                      ++++..+|+.+|+++||+++|++++|||.+++++. ++....  -.+.++.+.+|+.+.+...+..+|+++..++..|..
T Consensus        26 ~~~s~~eL~~eA~~~Al~DAGl~~~dID~~~~g~~-~~~~~g~~~~~~~~~~~~g~~~~p~~~v~~~~asg~~a~~~A~~  104 (393)
T PRK06065         26 MLETPQELAWEAARQALDEAGLELKDIDCVVIGSA-PDAFDGVHMKGEYLAHGSGGIRKPVSRVFVGGATGVMVPIAGWY  104 (393)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECC-CCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH
T ss_conf             99999999999999999984999899899999556-76545432036899975477788447874452788999999999


Q ss_pred             HHHHCCCCCCEEEEECCCCCCC-----------CC--CCC----------------------------------------
Q ss_conf             8964155653167630224322-----------24--566----------------------------------------
Q gi|254780497|r  126 YIRSGVVRRVMVIGSDTFSRIV-----------DW--SDR----------------------------------------  152 (324)
Q Consensus       126 li~~g~~~~~Lvv~~e~~S~~~-----------d~--~d~----------------------------------------  152 (324)
                      .|++|.++.+||++.|..+...           |+  +.+                                        
T Consensus       105 ~I~sG~~d~vlvvg~ek~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~Al~a~rym~~yG~t~E~lA~Vav~~r~~A~~  184 (393)
T PRK06065        105 HVASGLCKKVLAVAEEKMSPARPHPQSVFRYIWDPILEKPLNPNLIWIFAMEMHRYMHVCGVKKEDIALVSVKNKRNALN  184 (393)
T ss_pred             HHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf             98678776899987404688876631466630350113667886799999999999998499999999999999998744


Q ss_pred             --C--------------C-----------CCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCC
Q ss_conf             --3--------------2-----------323454431234402654465434454101232035555561775487654
Q gi|254780497|r  153 --S--------------T-----------CVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPST  205 (324)
Q Consensus       153 --~--------------~-----------~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (324)
                        .              +           +...+|||+|+||.+.+.... ..+..+   ++..-+...+...+     .
T Consensus       185 NP~A~~r~~~t~edvl~S~~Ia~PL~l~Dc~~~sDGAaAvVl~s~e~A~~-l~~~pv---~I~g~g~~~~~~~~-----~  255 (393)
T PRK06065        185 NPYAQLAANITVEDVLNSEVLVWPVQLLDVSPVSDGAAAMVLASEDVARR-YTDTPV---WVEGVGWTLDNTEW-----T  255 (393)
T ss_pred             CCHHHCCCCCCHHHHCCCCCCHHCCCHHHCCCCCCCEEEEEEECHHHHHH-CCCCCE---EEEEEEEECCCCCC-----C
T ss_conf             92966479999688604741221324253188788218999944899975-689978---99999974367664-----5


Q ss_pred             CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCCCCCCCCCCHHHHHHHHHHCCCCHH----HHHH-----
Q ss_conf             4433200103202444557777777888898740010--0012102444441589999997197876----7336-----
Q gi|254780497|r  206 SRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTI--ENIDWFVPHQANWRIINSIVDKMKIPFD----KVIV-----  274 (324)
Q Consensus       206 ~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~--~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~~~-----  274 (324)
                      .          +.+  ..........+++.+++|+++  +|||.+-+|-.--..--...|.||+-+.    +++.     
T Consensus       256 ~----------~d~--~~~~~~~~aa~~Ay~~AGi~~p~~DiDv~evyD~Ft~~el~~lE~lGfc~~Ge~~~~v~~G~~~  323 (393)
T PRK06065        256 N----------RDL--AYPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDYKELHHIEGLMLAKRGEAPKLLKEGVFD  323 (393)
T ss_pred             C----------CCC--CCCHHHHHHHHHHHHHCCCCCCHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCC
T ss_conf             4----------553--3217999999999997699997200737985067508899999984999898379999779956


Q ss_pred             -------H----HHHHCCCHHHHHHHHHHHHHHC--C-----CCCCCCEE-EEEEECC-CCCEEEEEEE
Q ss_conf             -------5----8651933012699999999980--6-----88999899-9999714-5014568786
Q gi|254780497|r  275 -------T----VDIHGNTSAASIPLALAVAVKE--G-----RVKKGDCL-LLEAMGG-GFTSGTVLLR  323 (324)
Q Consensus       275 -------~----~~~~Gn~~sas~~~~L~~~~~~--g-----~l~~Gd~v-ll~~~G~-G~s~~a~llr  323 (324)
                             |    +--.||-..++=...+.++.++  |     ++++.-++ |.-+.|. |-....++||
T Consensus       324 ~~G~lPvNtsGGlls~Ghp~gatG~~~~~Ea~~QLrG~Ag~rQV~~~~~~gl~~~~Gg~~~~~~v~il~  392 (393)
T PRK06065        324 RDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYWQLKGTAGKMQVKKPVHTGVAQAWGDLMQAGTVIVMR  392 (393)
T ss_pred             CCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHCEEEEEEC
T ss_conf             799713538971002888561569999999999965776777479987789981667500345999955


No 75 
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.53  E-value=9.8e-13  Score=101.05  Aligned_cols=100  Identities=17%  Similarity=0.187  Sum_probs=84.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC-CCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHH
Q ss_conf             8988999999999999997402123544336650122334-58985310011220268-644442101220034678889
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQ-TFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTAD  124 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~-~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~  124 (324)
                      -.+.++.||+..+++.+|++++++|++||-||++++.+-. .-...+..+.-.-|++. ..++.|+..|.|++.++..|.
T Consensus        23 l~~~~~~~L~a~~i~~~l~r~~i~~~~Id~vi~G~v~~~g~~g~n~aR~~al~aGlp~~vpa~TVnr~C~SGl~Ai~~Aa  102 (402)
T PRK08242         23 LHEVKPVRLAAGLLNALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQINRFCASGLEAVNLAA  102 (402)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHH
T ss_conf             79898999999999999987098989999799980776554457799999997699988864788450557899999999


Q ss_pred             HHHHHCCCCCCEEEEECCCCCC
Q ss_conf             9896415565316763022432
Q gi|254780497|r  125 SYIRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       125 ~li~~g~~~~~Lvv~~e~~S~~  146 (324)
                      ..|++|..+.++..+.|.+|+.
T Consensus       103 ~~I~~G~~dv~iAGGvEsmS~~  124 (402)
T PRK08242        103 AKVRSGWDDLVIAGGVESMSRV  124 (402)
T ss_pred             HHHHCCCCCEEEECCCCCCCCC
T ss_conf             9996699888997661345657


No 76 
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=99.53  E-value=1.6e-12  Score=99.62  Aligned_cols=251  Identities=19%  Similarity=0.202  Sum_probs=151.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             89889999999999999974021235443366501223345898531001122026864444210122003467888998
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSY  126 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~l  126 (324)
                      .++.+..+|+.+|+++||+++|++++|||.+++++..+..    ....+.+.||++......+..+|+++..++..|...
T Consensus        20 ~~~~t~~~La~eA~~~AL~DAGl~~~DIDg~~~~~~~~~~----~~~~~~~~lGi~~~~~~~~~~gGas~~~~~~~A~~a   95 (388)
T PRK08142         20 APDKSVAQLHAEVAKGALADAGLTLADVDGYFCAGDAPGL----GPASMVDYLGLKVRHVDSTETGGSSYLAHVGHAAQA   95 (388)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCCC----CHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHH
T ss_conf             8998999999999999999759998999999876788874----189999970998576447546357999999999999


Q ss_pred             HHHCCCCCCEEEEECCCCC--------------C--CCCC----------------------------------------
Q ss_conf             9641556531676302243--------------2--2245----------------------------------------
Q gi|254780497|r  127 IRSGVVRRVMVIGSDTFSR--------------I--VDWS----------------------------------------  150 (324)
Q Consensus       127 i~~g~~~~~Lvv~~e~~S~--------------~--~d~~----------------------------------------  150 (324)
                      |++|.++.+||+.++....              .  ..|+                                        
T Consensus        96 IasG~~d~vlv~~a~~~~~~~~~~~~~~~~~~~~~~~~~e~p~G~~~~~~~Al~a~rym~~yG~t~e~lA~vav~~r~~A  175 (388)
T PRK08142         96 IAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYGMCAMRHMHEYGTTSEQLAWIKVAASHHA  175 (388)
T ss_pred             HHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf             98488778999981233566777544334456676420112357746999999999999997969999999999999986


Q ss_pred             ---------CCC------------------CCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCC
Q ss_conf             ---------663------------------23234544312344026544654344541012320355555617754876
Q gi|254780497|r  151 ---------DRS------------------TCVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGP  203 (324)
Q Consensus       151 ---------d~~------------------~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (324)
                               .+.                  -+...+|||+|+||.+.+.... .....+   ++..-+....     ...
T Consensus       176 ~~NP~A~~r~~~t~edvl~s~~Ia~Pl~l~dc~~~sDGaaAvvl~s~e~a~~-l~~~~v---~i~g~g~~~~-----~~~  246 (388)
T PRK08142        176 QHNPHAMLRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALIVARPEIARS-LKRPLV---KVLGAGEAIK-----GQM  246 (388)
T ss_pred             CCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECHHHHHH-CCCCCE---EEEEEEEECC-----CCC
T ss_conf             0494101589989788347752352222474077668618999935999976-689958---9999997247-----876


Q ss_pred             CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH----HHH------
Q ss_conf             5444332001032024445577777778888987400100012102444441589999997197876----733------
Q gi|254780497|r  204 STSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD----KVI------  273 (324)
Q Consensus       204 ~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~~------  273 (324)
                      ....  .           ...........++++++|++++|||.+-+|-.-...--...|.||+-+.    +++      
T Consensus       247 ~~~~--d-----------~~~~~~~~aa~~a~~~AGi~p~DiDv~e~yD~fs~~~~~~lE~lGfc~~Ge~~~~v~~G~~~  313 (388)
T PRK08142        247 GGKV--D-----------LTYSGAAWSGPAAFAEAGVTPADIKYASIYDSFTITVLMQLEDLGFCKKGEGGKFVADGNLI  313 (388)
T ss_pred             CCCC--C-----------CCHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCC
T ss_conf             6565--4-----------41258999999999985999888747863277508899999982997888369998779902


Q ss_pred             -------HH----HHHHCCCHHHHHHHHHHHHHHCCCCCCC--------CEEEEEEECC----CCCEEEEEEE
Q ss_conf             -------65----8651933012699999999980688999--------8999999714----5014568786
Q gi|254780497|r  274 -------VT----VDIHGNTSAASIPLALAVAVKEGRVKKG--------DCLLLEAMGG----GFTSGTVLLR  323 (324)
Q Consensus       274 -------~~----~~~~Gn~~sas~~~~L~~~~~~g~l~~G--------d~vll~~~G~----G~s~~a~llr  323 (324)
                             .|    +--.||.+.++=+..+.++.++-+=+.|        +..|.-++|.    +....+++|+
T Consensus       314 ~~~G~lPvNtsGGlls~ghp~~atG~~~~~Eav~QLrG~Ag~~~QV~~a~~al~~~~GG~~~~~~~~~~~il~  386 (388)
T PRK08142        314 SGVGKLPFNTDGGGLCNNHPANRGGMTKVIEAVRQLRGEAHPAVQVPNCDLALAHGTGGLLGSRHGSATLILE  386 (388)
T ss_pred             CCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEE
T ss_conf             2899802508964321898662379999999999971778987667987589996888401247614899970


No 77 
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.52  E-value=1.2e-12  Score=100.59  Aligned_cols=243  Identities=19%  Similarity=0.216  Sum_probs=146.2

Q ss_pred             HHHHHHHHHHHHHHHHCCC-CC-----CCCEEEEECCCCC-----------------CC--------CCC-CCCCHHHHH
Q ss_conf             9999999999999740212-35-----4433665012233-----------------45--------898-531001122
Q gi|254780497|r   52 TASLGEAAARDALHHAEMS-VD-----DIDLIIVATSTPD-----------------QT--------FPS-TAVNIQNRL   99 (324)
Q Consensus        52 ~~~la~~Aa~~al~~a~~~-~~-----~Id~ii~~s~~~~-----------------~~--------~p~-~a~~i~~~L   99 (324)
                      ...|++.|+++||+++|+. .+     +++ |++++....                 ..        +|+ .+++|...+
T Consensus         4 ~~~~a~~AA~eAl~dAGl~~~~~~~~~r~G-V~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~   82 (336)
T PRK09116          4 VSLMATRASELALADAGLLGDPILTDGRMG-VAYGSSTGSTDPIGAFGTMLLTGSMSGITATTYVRMMPHTTAVNVGLFF   82 (336)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCEE-EEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHH
T ss_conf             899999999999996599998667888889-9999574768999999999971898764835776532229999999996


Q ss_pred             HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC---------------------CCCC-CCCCCC
Q ss_conf             026864444210122003467888998964155653167630224322---------------------2456-632323
Q gi|254780497|r  100 GMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIV---------------------DWSD-RSTCVL  157 (324)
Q Consensus       100 Gl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~---------------------d~~d-~~~~~l  157 (324)
                      |++ .+++.+..+|++++.||..|..+|++|+.+.+++.++|..++..                     ++.| ....+.
T Consensus        83 ~l~-Gps~tv~tACsSs~~Al~~A~~~I~~G~~d~~i~Gg~~~l~~~~~~~f~~l~~~s~~~~~p~~~~rPFD~~r~G~v  161 (336)
T PRK09116         83 GLK-GRVIPTSSACTSGSQGIGYAYEAIKYGYQTLMLAGGAEELCPTEAAVFDTLFATSTKNDAPELTPRPFDANRDGLV  161 (336)
T ss_pred             CCC-CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
T ss_conf             899-9751635541689999999999997599888993500026880789999999983489999877787778999547


Q ss_pred             CCCCCCEEEEECCCCCCCCCC--CCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             454431234402654465434--454101232035555561775487654443320010320244455777777788889
Q gi|254780497|r  158 FGDGAGALILEGVEVKGSSMA--DTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVF  235 (324)
Q Consensus       158 fGDGAaA~ll~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L  235 (324)
                      .|+|+++++|++.+.......  ...+.+....+|+..                 ....+        .....+.++++|
T Consensus       162 ~gEGa~~lvLe~~~~A~~rga~i~a~i~G~~~~~dg~~-----------------~t~P~--------~~~~~~~~~~al  216 (336)
T PRK09116        162 IGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAH-----------------VTQPQ--------AETMQIAMELAL  216 (336)
T ss_pred             ECCEEEEEEEEEHHHHHHCCCEEEEEEECEEECCCCCC-----------------CCCCC--------HHHHHHHHHHHH
T ss_conf             70434799972889998679957999812066048888-----------------98979--------999999999999


Q ss_pred             HHHHCCCCCCCCCCCCCCCHHH-----HHHHHHHCCCCHHHHHH-HHHHHCCCHHHHHHHHHHH---HHHCCCCC-----
Q ss_conf             8740010001210244444158-----99999971978767336-5865193301269999999---99806889-----
Q gi|254780497|r  236 DSTHLTIENIDWFVPHQANWRI-----INSIVDKMKIPFDKVIV-TVDIHGNTSAASIPLALAV---AVKEGRVK-----  301 (324)
Q Consensus       236 ~~~gl~~~did~~~~Hq~~~~~-----~~~~~~~lgl~~e~~~~-~~~~~Gn~~sas~~~~L~~---~~~~g~l~-----  301 (324)
                      ++++++++|||++-.|-.+-..     .+.+.+.++-  +..+. +=..+||+..++=.+.+..   +++++.+.     
T Consensus       217 ~~ag~~~~~i~yI~aHgtgT~~gD~~E~~ai~~~fg~--~~pi~S~Ks~~GH~~gAaG~~e~i~~~~~l~~g~ipp~~n~  294 (336)
T PRK09116        217 KDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFGA--RMPISSLKSYFGHTLGACGALEAWFSIEMMNEGWFAPTLNL  294 (336)
T ss_pred             HHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCC--CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             9709880212289953777888899999999998576--78887764210441777999999999999965961898999


Q ss_pred             --------------------CCCEEEEEEECCCCCEEEEEEE
Q ss_conf             --------------------9989999997145014568786
Q gi|254780497|r  302 --------------------KGDCLLLEAMGGGFTSGTVLLR  323 (324)
Q Consensus       302 --------------------~Gd~vll~~~G~G~s~~a~llr  323 (324)
                                          +-+.++.-+||=|=+=.+++||
T Consensus       295 ~~~~p~~~~l~~v~~~~~~~~~~~~l~nsfGfGG~Na~lvlr  336 (336)
T PRK09116        295 TNVDPACGALDYIMGEGREIDTEYVMSNNFAFGGINTSLIFK  336 (336)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEC
T ss_conf             999977665677788774378889999344287445899979


No 78 
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=99.52  E-value=3.3e-13  Score=104.08  Aligned_cols=100  Identities=18%  Similarity=0.172  Sum_probs=83.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC-CCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             89889999999999999974021235443366501223345-898531001122026-8644442101220034678889
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQT-FPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTAD  124 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~-~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~  124 (324)
                      -.+.++.||++.+++.+|++++++|++||-||++.+.+... ....+..+.-.-|++ ...++.|+..|+|++.|+..|.
T Consensus        21 l~~~~~~~L~a~~i~~~l~r~~i~~~~Id~vi~G~v~~~g~~~~n~aR~~al~aGlp~~vp~~tVnr~CaSGl~Ai~~Aa  100 (401)
T PRK08131         21 LASVRPDDLAATVIRRLVEKSGFAGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVNRLCASGLSAVIDAA  100 (401)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHH
T ss_conf             89998899999999999997298989989899981466565446699999996699988871687525357899999999


Q ss_pred             HHHHHCCCCCCEEEEECCCCCC
Q ss_conf             9896415565316763022432
Q gi|254780497|r  125 SYIRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       125 ~li~~g~~~~~Lvv~~e~~S~~  146 (324)
                      ..|++|..+-+|+++.|.+|+.
T Consensus       101 ~~I~~G~~dvvlagGvEsMS~~  122 (401)
T PRK08131        101 RAITCGEGDLYLAGGVESMSRA  122 (401)
T ss_pred             HHHHCCCCCEEEEEEEECCCCC
T ss_conf             9985799772588506503546


No 79 
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.51  E-value=6e-13  Score=102.38  Aligned_cols=99  Identities=11%  Similarity=0.117  Sum_probs=81.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC-CCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             98899999999999999740212354433665012233458-98531001122026-86444421012200346788899
Q gi|254780497|r   48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTF-PSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADS  125 (324)
Q Consensus        48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~-p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~  125 (324)
                      .+.++.+|+..+++.+|++++++|++||-|+++++.+.-.. +..+..+.-.-|++ ..+++.|+..|+|++.|+..|..
T Consensus        28 ~~~~~~~L~a~~~~~~l~r~gi~~~~Id~vi~G~~~~~g~~~~~~aR~~~l~aGlp~~vpa~tVn~~CaSG~~Ai~~A~~  107 (394)
T PRK06445         28 NDLRPEELAAVLINALIEKTGIKPEEIGDVITGCALQVGENWLYGGRHVVLLAKLPYTIPAMHVDRQCASSLTTVAIGAM  107 (394)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHH
T ss_conf             78999999999999999874989899697999647555656674889999976999888748885541689999999999


Q ss_pred             HHHHCCCCCCEEEEECCCCCC
Q ss_conf             896415565316763022432
Q gi|254780497|r  126 YIRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       126 li~~g~~~~~Lvv~~e~~S~~  146 (324)
                      .|++|..+.+|+++.|.+|+.
T Consensus       108 ~I~sG~~dvvlAgGvEsmS~~  128 (394)
T PRK06445        108 EIATGMADIVIAGGVEHMTHT  128 (394)
T ss_pred             HHHCCCCCEEEEECEECCCCC
T ss_conf             997399999999474236678


No 80 
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.51  E-value=1.6e-13  Score=106.04  Aligned_cols=222  Identities=18%  Similarity=0.208  Sum_probs=138.5

Q ss_pred             HHHHHHHHHHHHHCCCCCCCC----EEEEECCCCCCCC------------------CC-CCCCHHHHHHCCCCCCCCCCC
Q ss_conf             999999999974021235443----3665012233458------------------98-531001122026864444210
Q gi|254780497|r   55 LGEAAARDALHHAEMSVDDID----LIIVATSTPDQTF------------------PS-TAVNIQNRLGMKRGFAFDMQA  111 (324)
Q Consensus        55 la~~Aa~~al~~a~~~~~~Id----~ii~~s~~~~~~~------------------p~-~a~~i~~~LGl~~~~~~di~~  111 (324)
                      |+.+++.+||+++|+++++++    -|+.+++..+|..                  ++ .|++|...+|++ .+++.|..
T Consensus        90 l~L~~a~~Al~dAG~~~~~l~~~r~GV~vG~~~~d~~~~~~~~~~~~~~~~~~~~~~s~~a~ris~~~~l~-Gp~~~vdt  168 (424)
T smart00825       90 LLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR-GPSVTVDT  168 (424)
T ss_pred             HHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC-CCEEEECC
T ss_conf             99999999999739983565887438999751663777764175557852024531768999999985899-96351414


Q ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC-CC----------CC------CCCC-CCCCCCCCCCCCEEEEECCCCC
Q ss_conf             12200346788899896415565316763022-43----------22------2456-6323234544312344026544
Q gi|254780497|r  112 VCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF-SR----------IV------DWSD-RSTCVLFGDGAGALILEGVEVK  173 (324)
Q Consensus       112 ~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~-S~----------~~------d~~d-~~~~~lfGDGAaA~ll~~~~~~  173 (324)
                      +|+|++.||..|..+|++|+.+.+|+-+++.. +.          .+      .+.| ....+.+|+|++++||++.+..
T Consensus       169 ACsSsl~Al~~A~~~i~~G~~D~alvGg~~~~~~p~~~~~~~~~~~lS~~g~~rpFD~~adG~v~gEGa~~lvLk~l~~A  248 (424)
T smart00825      169 ACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGVVVLKRLSDA  248 (424)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCEEECCCCEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHH
T ss_conf             72899999999999997699633001426673487899998615787999987557788998410476579974659999


Q ss_pred             CCCC--CCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             6543--44541012320355555617754876544433200103202444557777777888898740010001210244
Q gi|254780497|r  174 GSSM--ADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPH  251 (324)
Q Consensus       174 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~H  251 (324)
                      ....  ....+.+....+|+....               ....++        ....++++++|++++++|+||+++-.|
T Consensus       249 ~~~g~~Iya~I~G~~~~~dG~~~~---------------~~~P~~--------~~~~~~~~~Al~~a~i~p~~I~yieaH  305 (424)
T smart00825      249 LRDGDPILAVIRGSAVNQDGRSNG---------------LTAPSG--------PAQARLIRQALARAGVDPADVDYVEAH  305 (424)
T ss_pred             HHCCCCEEEEEECEEEECCCCCCC---------------CCCCCH--------HHHHHHHHHHHHHHCCCCCCCCEEEEC
T ss_conf             876991799993437825898787---------------789998--------999999999999829896646879960


Q ss_pred             CCCHHH-----HHHHHHHCCCCH--HH-H-HH-HHHHHCCCHHHHHHHHHHH---HHHCCCC
Q ss_conf             444158-----999999719787--67-3-36-5865193301269999999---9980688
Q gi|254780497|r  252 QANWRI-----INSIVDKMKIPF--DK-V-IV-TVDIHGNTSAASIPLALAV---AVKEGRV  300 (324)
Q Consensus       252 q~~~~~-----~~~~~~~lgl~~--e~-~-~~-~~~~~Gn~~sas~~~~L~~---~~~~g~l  300 (324)
                      -.+...     .+.+.+.++-..  .+ + +. +=..+||+.+++=.+.+-.   +++++.+
T Consensus       306 gtgt~~gD~~E~~al~~~f~~~~~~~~~~~igS~K~~~GH~~~AaG~~~lik~~lal~~~~i  367 (424)
T smart00825      306 GTGTPLGDPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTI  367 (424)
T ss_pred             CCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf             36687779999999999962368877842520453442333777899999999999856970


No 81 
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=99.51  E-value=1.6e-13  Score=106.06  Aligned_cols=273  Identities=14%  Similarity=0.155  Sum_probs=152.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC-CCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             8988999999999999997402123544336650122334-5898531001122026-8644442101220034678889
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQ-TFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTAD  124 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~-~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~  124 (324)
                      -.+.++.||+..+++.+|+|++++|++||.||++++.+.. ..+..+..+.-..|++ ...++.|+..|+|++.|+..|.
T Consensus        21 l~~~~~~~L~~~a~~~~l~r~~v~~~~Id~vi~G~v~~~g~~~~n~aR~~~l~aglp~~vpa~tvn~~C~SGl~Ai~~A~  100 (390)
T PRK06504         21 LAGWHPADLAAQVLDALVDRSGADPAQIEDVIMGCVSQAGEQAMNVARNAVLASKLPESVPGTSIDRQCGSSQQALHFAA  100 (390)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHH
T ss_conf             89998999999999999988098989989899991787453324099999997799976754777346785899999999


Q ss_pred             HHHHHCCCCCCEEEEECCCCCCCCC--C------------CCC-----CCCCCCCCCCEEEE------ECCCCCC-----
Q ss_conf             9896415565316763022432224--5------------663-----23234544312344------0265446-----
Q gi|254780497|r  125 SYIRSGVVRRVMVIGSDTFSRIVDW--S------------DRS-----TCVLFGDGAGALIL------EGVEVKG-----  174 (324)
Q Consensus       125 ~li~~g~~~~~Lvv~~e~~S~~~d~--~------------d~~-----~~~lfGDGAaA~ll------~~~~~~~-----  174 (324)
                      ..|++|..+.+|+.+.|.+|+.-..  .            ++.     ....|+.+.+|-.+      ++++...     
T Consensus       101 ~~I~sG~~dv~lagGvEsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~AE~~A~~ygisRe~qD~~A~~S  180 (390)
T PRK06504        101 QAVMSGTMDVVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQFTGAEMMAKKYGLSKDQLDEYALQS  180 (390)
T ss_pred             HHHHCCCCCEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf             99847996777315621036898876543331126776688235663788754336799999999795999999999999


Q ss_pred             ---------CCCCCCCCEEEEEECCCCCCCCEEECCCCCCC---CCCC---CHH-------------HCCHH--------
Q ss_conf             ---------54344541012320355555617754876544---4332---001-------------03202--------
Q gi|254780497|r  175 ---------SSMADTGILSTYLCSDGSYIDKLYVDGGPSTS---RTVG---CIR-------------MEGKA--------  218 (324)
Q Consensus       175 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~-------------~~g~~--------  218 (324)
                               ......+++................+.+....   +...   .+.             .||-.        
T Consensus       181 h~~A~~A~~~g~f~~EIvPv~~~~~~~~~~~~~~De~~R~~~t~e~l~~l~p~~~~gtvTagnss~~~DGAAavll~Se~  260 (390)
T PRK06504        181 HQRAIAATQAGKFKDEIVPLEITRADGSTDMHTIDEGIRFDATLEGIKGVKLIAEGGKLTAATASQICDGASGVMVVNER  260 (390)
T ss_pred             HHHHHHHHHCCCCCCEEEEEEEECCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             99999998748952016877874378870140465455788588777415446889977688667777616888874499


Q ss_pred             -H--------------------HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--
Q ss_conf             -4--------------------44557777777888898740010001210244444158999999719787673365--
Q gi|254780497|r  219 -V--------------------FKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--  275 (324)
Q Consensus       219 -~--------------------~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--  275 (324)
                       .                    .......-...++++|+++|++++|||.|=+|-+--...-.+.+.|+++++|+..+  
T Consensus       261 ~a~~~gl~pla~i~~~~~~g~dP~~m~~~p~~A~~k~L~~agl~~~Did~~EinEAFA~~~l~~~~~l~~d~~kvN~~GG  340 (390)
T PRK06504        261 GLKALGVKPLARIHHMTVTGGDPVIMLEAPLPATERALKKAGMKIDDIDLYEVNEAFASVPLAWLKATGADPERLNVNGG  340 (390)
T ss_pred             HHHHCCCCCEEEEECCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCHHHCCCCCC
T ss_conf             99987998269995303752687887243999999999985998113885451035588899999984898676788863


Q ss_pred             HHHHCCCHH---HHHHHHHHHHHHCCCCCCCCEEEE-EEECCCCCEEEEEEE
Q ss_conf             865193301---269999999998068899989999-997145014568786
Q gi|254780497|r  276 VDIHGNTSA---ASIPLALAVAVKEGRVKKGDCLLL-EAMGGGFTSGTVLLR  323 (324)
Q Consensus       276 ~~~~Gn~~s---as~~~~L~~~~~~g~l~~Gd~vll-~~~G~G~s~~a~llr  323 (324)
                      .--+||=..   +-+.+.|.+.++.   +.|.+.+. ...|.|.-. +++++
T Consensus       341 aiA~GHP~GaTGar~~~~l~~~L~~---~~~~~gl~s~c~ggG~g~-a~viE  388 (390)
T PRK06504        341 AIALGHPLGASGTKLMTTLIHALKQ---RGKRYGLQTMCEGGGMAN-VTIVE  388 (390)
T ss_pred             HHHHCCCCCCCHHHHHHHHHHHHHH---HCCCEEEEEECCCCCCEE-EEEEE
T ss_conf             9872989130799999999999998---299989999613013333-69898


No 82 
>PRK07025 consensus
Probab=99.51  E-value=3.4e-13  Score=104.00  Aligned_cols=99  Identities=18%  Similarity=0.221  Sum_probs=85.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             98899999999999999740212354433665012233458985310011220268-64444210122003467888998
Q gi|254780497|r   48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTADSY  126 (324)
Q Consensus        48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~~l  126 (324)
                      .+.++.||++.+++.+|++++++|++||-||+++..+...-+..+..+.-..|++. .+++.|+..|+|++.|+..|...
T Consensus        22 ~~~~~~~L~~~~i~~~l~r~~i~~~~Id~vi~G~v~~~g~g~n~aR~~al~aGlp~~vp~~tVnr~C~SGl~Ai~~Aa~~  101 (393)
T PRK07025         22 AKIAAPELGATVIRAVLERAGVKPEQVSEVILGQVLTAGSGQNPARQALIKAGLPNAVPGMTINKVCGSGLKAVMLAANA  101 (393)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHH
T ss_conf             88989999999999999982989899898999924765556649999999769998886488841536778999999999


Q ss_pred             HHHCCCCCCEEEEECCCCCC
Q ss_conf             96415565316763022432
Q gi|254780497|r  127 IRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       127 i~~g~~~~~Lvv~~e~~S~~  146 (324)
                      |++|..+.+|+.+.|.+|+.
T Consensus       102 I~~G~~dvvlagGvEsmS~~  121 (393)
T PRK07025        102 IVAGDAEIVVAGGQENMSAA  121 (393)
T ss_pred             HHCCCCCEEEEEEEEECCCC
T ss_conf             86799766788601103567


No 83 
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.50  E-value=9.5e-13  Score=101.12  Aligned_cols=99  Identities=17%  Similarity=0.263  Sum_probs=86.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             9889999999999999974021235443366501223345898531001122026-864444210122003467888998
Q gi|254780497|r   48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADSY  126 (324)
Q Consensus        48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~l  126 (324)
                      .+.++.+|+..+++.+|+|++++|++||-||++++.+...-|..+.++.-..|++ ...++.|+..|.|++.|+..|...
T Consensus        22 ~~~~~~~L~a~~ik~~l~r~~i~~~~Id~Vi~G~~~~~g~~~~~aR~aaL~aGlp~~vpa~tVnr~C~SGl~Ai~~Aa~~  101 (404)
T PRK06205         22 KPVPAEELAATVLRALVERTGIDPARVDDVIFGQCYPNGEAPAIGRVAALDAGLPVTVPGMQLDRRCGSGLQAVITAAMQ  101 (404)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHH
T ss_conf             99988999999999999981989899897999942656767779999999779898875588815053327899999999


Q ss_pred             HHHCCCCCCEEEEECCCCCC
Q ss_conf             96415565316763022432
Q gi|254780497|r  127 IRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       127 i~~g~~~~~Lvv~~e~~S~~  146 (324)
                      |++|..+.+|+.+.|.+|+.
T Consensus       102 I~sG~~dvviaGGvEsmS~~  121 (404)
T PRK06205        102 VQTGAADVVIAGGAESMSNV  121 (404)
T ss_pred             HHCCCCCEEEECCCCCCCCC
T ss_conf             96499777874142124668


No 84 
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=99.50  E-value=7.9e-13  Score=101.65  Aligned_cols=272  Identities=17%  Similarity=0.146  Sum_probs=149.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC-CCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             8988999999999999997402123544336650122334-5898531001122026-8644442101220034678889
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQ-TFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTAD  124 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~-~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~  124 (324)
                      -.+.++.||+..+++.+|+|++++|++||-||++++.+.- .....+....=.-|++ ...++.|+..|.|++.++..|.
T Consensus        21 l~~~~~~~L~a~~ik~~l~r~~l~~~~id~Vi~G~v~~~g~~g~n~aR~aaL~aGlp~~vpa~tVnr~C~Sgl~Ai~~aa  100 (387)
T PRK07850         21 LSGLHAAELLGAVQRAVVERAGIDPGDVEQVIGGCVTQAGEQSNNITRVAWLTAGLPEHVGATTVDCQCGSAQQANHLVA  100 (387)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHH
T ss_conf             89998899999999999987298989979899987867655456899999997799976760656351117899999999


Q ss_pred             HHHHHCCCCCCEEEEECCCCCCCCCC----CCC----CCCCCCCC---CCE------EEEECCCCCC-------------
Q ss_conf             98964155653167630224322245----663----23234544---312------3440265446-------------
Q gi|254780497|r  125 SYIRSGVVRRVMVIGSDTFSRIVDWS----DRS----TCVLFGDG---AGA------LILEGVEVKG-------------  174 (324)
Q Consensus       125 ~li~~g~~~~~Lvv~~e~~S~~~d~~----d~~----~~~lfGDG---AaA------~ll~~~~~~~-------------  174 (324)
                      ..|++|..+.+++.+.|.+|+.--..    ++.    ..+.+.+.   -+|      .=+++++...             
T Consensus       101 ~~I~~G~~dv~iaGG~EsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~tAE~~A~~~gIsRe~qD~~A~~Sh~rA~~A~  180 (387)
T PRK07850        101 GLIAAGAIDVGIACGIEAMSRVPLGANAGPDRGLPRPDSWDIDMPNQFEAAERIAKRRGITREDVDAFGLASQRRAAQAW  180 (387)
T ss_pred             HHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             99877998899982503036787767678887875355407677206689999999849898999999999999999998


Q ss_pred             -CCCCCCCCEEEEEEC-CC--CCC-C--CEEECCCCCC--CCC----CCCHH------------HCCHH-----------
Q ss_conf             -543445410123203-55--555-6--1775487654--443----32001------------03202-----------
Q gi|254780497|r  175 -SSMADTGILSTYLCS-DG--SYI-D--KLYVDGGPST--SRT----VGCIR------------MEGKA-----------  218 (324)
Q Consensus       175 -~~~~~~~~~~~~~~~-~~--~~~-~--~~~~~~~~~~--~~~----~~~~~------------~~g~~-----------  218 (324)
                       ......+++...... +.  ... +  .+..+.+...  .+.    ...|.            .||-.           
T Consensus       181 ~~G~f~~EIvPv~~~~~d~~~~~~~~~~~~~~De~~r~tt~e~La~LkPvf~~GtvTAgNss~~~DGAAavll~s~~~a~  260 (387)
T PRK07850        181 AEGRFDREISPVQAPVLDEQGQPTGERRLVTRDQGLRDTTMEGLAGLKPVLEGGIHTAGTSSQISDGAAAVLWMDEDRAR  260 (387)
T ss_pred             HCCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             74983104766650012345775587168637888666766567522898999766567667555406898883699999


Q ss_pred             ---------H---------HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH--HH
Q ss_conf             ---------4---------445577777778888987400100012102444441589999997197876733658--65
Q gi|254780497|r  219 ---------V---------FKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTV--DI  278 (324)
Q Consensus       219 ---------~---------~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~--~~  278 (324)
                               +         .......-...+.++|+++||+++|||.|=+|-+--...-.+.+.|++++||+..+-  =-
T Consensus       261 ~~gl~p~a~i~~~a~~g~dP~~m~~gPv~A~~k~L~~agl~~~Did~~EinEAFAaq~l~~~~~l~~d~~kvN~~GGaiA  340 (387)
T PRK07850        261 ALGLRPRARIVAQALVGAEPYYHLDGPVQSTAKVLEKAGMKIGDIDLVEINEAFASVVLSWAQVHEPDMDRVNVNGGAIA  340 (387)
T ss_pred             HCCCCEEEEEEEEEEEECCHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCHHHCCCCCCHHH
T ss_conf             87998259999667887485770706899999999985998346876786057788999999873997989799864887


Q ss_pred             HCCCH---HHHHHHHHHHHHHCCCCCCCCEEEEE-EECCCCCEEEEEE
Q ss_conf             19330---12699999999980688999899999-9714501456878
Q gi|254780497|r  279 HGNTS---AASIPLALAVAVKEGRVKKGDCLLLE-AMGGGFTSGTVLL  322 (324)
Q Consensus       279 ~Gn~~---sas~~~~L~~~~~~g~l~~Gd~vll~-~~G~G~s~~a~ll  322 (324)
                      +||=.   .+=+...|-+.++.   +.|.+.+.. ..|.|.-. ++++
T Consensus       341 lGHP~GasGaRi~~~l~~~L~~---~~~~~Gl~t~C~ggG~g~-A~ii  384 (387)
T PRK07850        341 LGHPVGSTGARLITTALHELER---TDKSTALITMCAGGALST-GTII  384 (387)
T ss_pred             HCCCCCCCHHHHHHHHHHHHHH---CCCCEEEEEECCHHCHHH-EEEE
T ss_conf             5888121379999999999987---299999999622014324-5989


No 85 
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=99.50  E-value=1.4e-12  Score=100.13  Aligned_cols=267  Identities=22%  Similarity=0.223  Sum_probs=149.9

Q ss_pred             CEEEEEEEEEECCCCEECHHHH-HHHHCCCHHH--HHH--CCCCCEE-----------EEECC-----CCCHHHHHHHHH
Q ss_conf             2269999999649841178899-9880999878--110--2475188-----------98289-----889999999999
Q gi|254780497|r    2 IRSTVRGIGLSLPRRVLSNSDL-ESIVDTSDGW--IKR--RVGISRR-----------HIAGK-----DETTASLGEAAA   60 (324)
Q Consensus         2 ~~~~I~~~g~ylP~~~v~~~el-~~~~~~~~~~--i~~--~~GI~~R-----------~~~~~-----~e~~~~la~~Aa   60 (324)
                      .+|.|+|+|...|.-. +.+++ +....-....  +.+  ..+...+           ...++     -+...-|+..|+
T Consensus         1 rRVvItG~g~~~P~g~-~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~v~~f~~~~~~~~~~~~~~d~~~~~~l~aa   79 (399)
T cd00832           1 RRAVVTGIGVVAPNGL-GVEEYWKAVLDGRSGLGPITRFDPSGYPARLAGEVPDFDAAEHLPGRLLPQTDRMTRLALAAA   79 (399)
T ss_pred             CCEEEECCEEECCCCC-CHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHCCHHHHHHHHHH
T ss_conf             9299971677897959-999999999729983542775575568776456779878011689889874699999999999


Q ss_pred             HHHHHHHCCCCCCCCE----EEEECCCCCC-----------------CCCC---------CCCCHHHHHHCCCCCCCCCC
Q ss_conf             9999740212354433----6650122334-----------------5898---------53100112202686444421
Q gi|254780497|r   61 RDALHHAEMSVDDIDL----IIVATSTPDQ-----------------TFPS---------TAVNIQNRLGMKRGFAFDMQ  110 (324)
Q Consensus        61 ~~al~~a~~~~~~Id~----ii~~s~~~~~-----------------~~p~---------~a~~i~~~LGl~~~~~~di~  110 (324)
                      ++||+++|+++++++-    |+.++....+                 ..|.         .+.+|...+|++ .+++-+.
T Consensus        80 ~~Al~dAGl~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~gl~-Gp~~tv~  158 (399)
T cd00832          80 DWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGMR-GPSGVVV  158 (399)
T ss_pred             HHHHHHCCCCHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-CCCCCHH
T ss_conf             998886099845648774289994256760255899999974185425611213566778888999982898-8741021


Q ss_pred             CCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCC---------------C------CCCCCCC-CCCCCCCCCCCEEEEE
Q ss_conf             0122003467888998964155653167630224---------------3------2224566-3232345443123440
Q gi|254780497|r  111 AVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFS---------------R------IVDWSDR-STCVLFGDGAGALILE  168 (324)
Q Consensus       111 ~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S---------------~------~~d~~d~-~~~~lfGDGAaA~ll~  168 (324)
                      .+|+|++.|+..|..+|+.| .+.+++.++|...               .      ...+.|. ...+.+|+||+++||+
T Consensus       159 tacsssl~Ai~~A~~~i~~G-~d~~i~Gg~~~~l~p~~~~~~~~~g~ls~~~~p~~~~rPFD~~r~G~v~GEGa~~lvLe  237 (399)
T cd00832         159 AEQAGGLDALAQARRLVRRG-TPLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAAAGYVPGEGGAILVLE  237 (399)
T ss_pred             CCCCHHHHHHHHHHHHHHCC-CCHHHCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEC
T ss_conf             14707999999999998769-72012177404516288999987566456999986504776789806642766788845


Q ss_pred             CCCCCCCCCCC--CCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             26544654344--5410123203555556177548765444332001032024445577777778888987400100012
Q gi|254780497|r  169 GVEVKGSSMAD--TGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENID  246 (324)
Q Consensus       169 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did  246 (324)
                      +.+........  ..+.+.-...|+          .. ..       .+        ...+.+.++++|++++++++|||
T Consensus       238 ~~~~A~~rGa~i~a~i~G~~~~~d~----------~~-~~-------~~--------~~~~~~a~~~Al~~agi~p~~I~  291 (399)
T cd00832         238 DAAAARERGARVYGEIAGYAATFDP----------PP-GS-------GR--------PPGLARAIRLALADAGLTPEDVD  291 (399)
T ss_pred             CHHHHHHCCCEEEEEEEEEEECCCC----------CC-CC-------CC--------HHHHHHHHHHHHHHHCCCCCEEE
T ss_conf             4988987889599999888984899----------89-99-------89--------79999999999997199967056


Q ss_pred             CCCCCCCCHH-----HHHHHHHHCCCCHHHH--HHHHHHHCCCHHHHHHHHHHH---HHHCCC
Q ss_conf             1024444415-----8999999719787673--365865193301269999999---998068
Q gi|254780497|r  247 WFVPHQANWR-----IINSIVDKMKIPFDKV--IVTVDIHGNTSAASIPLALAV---AVKEGR  299 (324)
Q Consensus       247 ~~~~Hq~~~~-----~~~~~~~~lgl~~e~~--~~~~~~~Gn~~sas~~~~L~~---~~~~g~  299 (324)
                      ++..|-.+-.     =.+.+.+.++-  ++.  -.+=..+||+.+++=.+.+-.   +++++.
T Consensus       292 yI~aHgTGT~~gD~~E~~Ai~~~fg~--~~~pv~S~K~~iGH~~~AaG~~~~i~~ll~l~~g~  352 (399)
T cd00832         292 VVFADAAGVPELDRAEAAALAAVFGP--RGVPVTAPKTMTGRLYAGGAPLDVATALLALRDGV  352 (399)
T ss_pred             EEEEECCCCCCCCHHHHHHHHHHHCC--CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             99983375855699999999999669--99878995422110699999999999999983596


No 86 
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.49  E-value=3e-12  Score=97.98  Aligned_cols=100  Identities=19%  Similarity=0.240  Sum_probs=86.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             898899999999999999740212354433665012233458985310011220268-6444421012200346788899
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTADS  125 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~~  125 (324)
                      -.+.++.||+..+++.+|++++++|++||-||++++.+...-+..+.++.-..|++. ..++.|+..|.|++.++..|..
T Consensus        21 l~~~~~~~L~a~~i~~~l~r~~i~p~~Id~Vi~G~v~~~g~g~n~aR~~aL~aGlp~~vp~~tVnr~C~SGl~Ai~~Aa~  100 (392)
T PRK05656         21 LANIPAVDLGAAVIRQLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQ  100 (392)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHH
T ss_conf             78998899999999999998399989989899990476566663999999977999888648985253677899999999


Q ss_pred             HHHHCCCCCCEEEEECCCCCC
Q ss_conf             896415565316763022432
Q gi|254780497|r  126 YIRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       126 li~~g~~~~~Lvv~~e~~S~~  146 (324)
                      .|++|..+-+|+.+.|.+|+.
T Consensus       101 ~I~~G~~dv~iagGvEsmS~~  121 (392)
T PRK05656        101 AIRCGDAEVIIAGGQENMSLA  121 (392)
T ss_pred             HHHCCCCCEEEEECCCCCCCC
T ss_conf             986699757898343336788


No 87 
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.48  E-value=1.5e-12  Score=99.87  Aligned_cols=100  Identities=19%  Similarity=0.230  Sum_probs=84.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC-CCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             8988999999999999997402123544336650122334-5898531001122026-8644442101220034678889
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQ-TFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTAD  124 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~-~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~  124 (324)
                      -.+.++.+|+..+++.+|+|++++|++||-||++++.+.- .-+..+..++=.-|++ ...++.|+..|.|++.++.+|.
T Consensus        22 l~~~~~~eL~a~~i~~~l~r~gi~~~~Id~Vi~G~v~~~g~~g~n~aR~aaL~aGlp~~vpa~tVnr~C~SGl~Ai~~Aa  101 (392)
T PRK07108         22 FNMTHGATLGGHVVAAAVERAKLDPARVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVNRFCSSGLQTIALAA  101 (392)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHH
T ss_conf             88999999999999999987098989999899994665565557799999996699988862777574555389999998


Q ss_pred             HHHHHCCCCCCEEEEECCCCCC
Q ss_conf             9896415565316763022432
Q gi|254780497|r  125 SYIRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       125 ~li~~g~~~~~Lvv~~e~~S~~  146 (324)
                      ..|++|..+.++..+.|.+|..
T Consensus       102 ~~I~~G~~dv~iAGGvEsmS~~  123 (392)
T PRK07108        102 QRIIAGEGDVFVAGGVESISCV  123 (392)
T ss_pred             HHHHCCCCCEEEEECEECCCCC
T ss_conf             7863899986788045114557


No 88 
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.48  E-value=2.5e-12  Score=98.44  Aligned_cols=100  Identities=19%  Similarity=0.240  Sum_probs=86.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             89889999999999999974021235443366501223345898531001122026-86444421012200346788899
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADS  125 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~  125 (324)
                      -.+.++.+|++.+++.+|+|++++|++||-||++++.+....+..|..+.=.-|++ ...++.|+..|+|++.++..|..
T Consensus        32 l~~~~~~~L~a~~ik~~l~r~~i~p~~Id~Vi~G~v~~~~~g~n~AR~aaL~aGlp~~vp~~TVnr~C~SGl~Ai~~Aa~  111 (436)
T PRK08963         32 FHGVPAVDLGKMVVGELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAE  111 (436)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHH
T ss_conf             58899899999999999998298989999899983675676772999999975999888626776322356899999999


Q ss_pred             HHHHCCCCCCEEEEECCCCCC
Q ss_conf             896415565316763022432
Q gi|254780497|r  126 YIRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       126 li~~g~~~~~Lvv~~e~~S~~  146 (324)
                      .|++|..+.+|..+.|.+|+.
T Consensus       112 ~I~~G~~dvvlaGGvEsMS~~  132 (436)
T PRK08963        112 SIMAGTIDIGIAGGADSSSVL  132 (436)
T ss_pred             HHHCCCCCEEEEECCCCCCCC
T ss_conf             997499978999451224668


No 89 
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.48  E-value=4.3e-11  Score=90.53  Aligned_cols=248  Identities=16%  Similarity=0.231  Sum_probs=155.6

Q ss_pred             HHHHHHHHHHHHHHHH-CCCCCCCCEEEEECCC-CCC-CC---CCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             9999999999999740-2123544336650122-334-58---98531001122026-8644442101220034678889
Q gi|254780497|r   52 TASLGEAAARDALHHA-EMSVDDIDLIIVATST-PDQ-TF---PSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTAD  124 (324)
Q Consensus        52 ~~~la~~Aa~~al~~a-~~~~~~Id~ii~~s~~-~~~-~~---p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~  124 (324)
                      ...|+..|.++++++. ..++.++.+++..... +.. +.   ......+.+.+|.. +..+.-+..||.|+..+|..|.
T Consensus        64 l~~la~~Al~eal~~~~~~~~~~~~l~l~l~e~~r~g~~~~~~~~~l~~l~~~~g~~~~~~s~~~~~G~as~~~al~~A~  143 (346)
T PRK06147         64 LAAMAAPALAEALEGLPALDASEAPLLLCVAEEERPGRPAGLEERLLRSLEEELGLRFEPGSAVIARGRVSGAVALLQAR  143 (346)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHH
T ss_conf             99999999999985078656323646998366557778751057899999987275667660565256304999999999


Q ss_pred             HHHHHCCCCCCEEEEECCCCC------------CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf             989641556531676302243------------22245663232345443123440265446543445410123203555
Q gi|254780497|r  125 SYIRSGVVRRVMVIGSDTFSR------------IVDWSDRSTCVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGS  192 (324)
Q Consensus       125 ~li~~g~~~~~Lvv~~e~~S~------------~~d~~d~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~  192 (324)
                      .+|+.|....+||.++|.+-.            .... +....++.|.||++++|++.+......  ..+...-+..+..
T Consensus       144 ~~l~~g~~~~~lv~GvDS~~~~~~l~~~~~~~rL~~~-~~~~GfvpGEgAa~llL~~~~~a~~rg--a~i~g~g~g~e~a  220 (346)
T PRK06147        144 RLIAAGGCPRVLVAGVDSLLTGPTLAHYEARERLLSS-QNSNGFIPGEAAAAVLLGRPAAARAPQ--LPCLGLGLGREPA  220 (346)
T ss_pred             HHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCC-CCCCCCCCCCHHEEEEECCCCHHHCCC--CCEEEEEEECCCC
T ss_conf             9986599987999987234787899999860542689-998895852020478852611001479--8234566203665


Q ss_pred             CCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH--H---HHHHHCCC
Q ss_conf             556177548765444332001032024445577777778888987400100012102444441589--9---99997197
Q gi|254780497|r  193 YIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRII--N---SIVDKMKI  267 (324)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~--~---~~~~~lgl  267 (324)
                      .+.          ...   ...+|        +.+.+.++.+|+.+++.+++|++++.|..+....  +   .+.+.++.
T Consensus       221 ~~~----------~~~---~p~~g--------~Gl~~A~~~Al~~ag~~~~~v~~~~ad~nGe~~r~~e~~~a~~R~~~~  279 (346)
T PRK06147        221 TVE----------SED---LPLRG--------DGLTQAFRAALAEAGIGLEDVGYRLADLNGEQYRFKEAALAESRLFRV  279 (346)
T ss_pred             CCC----------CCC---CCCCC--------HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCC
T ss_conf             334----------778---99865--------799999999998627985677779968998844213799999975202


Q ss_pred             CHH--HHHHHHHHHCCCHHHHHHHHHHHH---HHCCCCCCCCEEEEEEECCCCCEEEEEEEC
Q ss_conf             876--733658651933012699999999---980688999899999971450145687869
Q gi|254780497|r  268 PFD--KVIVTVDIHGNTSAASIPLALAVA---VKEGRVKKGDCLLLEAMGGGFTSGTVLLRW  324 (324)
Q Consensus       268 ~~e--~~~~~~~~~Gn~~sas~~~~L~~~---~~~g~l~~Gd~vll~~~G~G~s~~a~llrw  324 (324)
                      ..+  ..+..-+.+||+++|+-++.+.-+   +++| ..||..+|+++-.-+=..++++|++
T Consensus       280 ~~~~~~~~~pa~~~G~~GAA~G~~~~a~a~~a~~~g-~~pg~~~l~~~s~d~g~r~A~~l~~  340 (346)
T PRK06147        280 PHEFPDLWHPAECLGECGAALGPALLGVALAASRKG-YGPGPPVLCHASDDDGARGAAVLEY  340 (346)
T ss_pred             CCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHC-CCCCCCEEEEECCCCCCEEEEEEEE
T ss_conf             566666568777516478899999999999999828-6899867999547887526999850


No 90 
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.47  E-value=8e-12  Score=95.23  Aligned_cols=99  Identities=18%  Similarity=0.188  Sum_probs=82.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC-CCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             89889999999999999974021235443366501223345-898531001122026-8644442101220034678889
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQT-FPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTAD  124 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~-~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~  124 (324)
                      -.+.++.||+..+++.+++|++++|++||-||++.+.+.-. .+..+.++.=.-|++ ...++.|+..|.|++.++..|.
T Consensus        24 l~~~~~~~Lga~~i~~~l~r~gi~p~~ID~Vi~G~v~~~g~~g~n~aR~aaL~AGlp~~vpa~TVnr~C~SGl~Ai~~aa  103 (417)
T PRK06025         24 LAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLDRFCGGGITSVNLAA  103 (417)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHH
T ss_conf             79998999999999999987098979989899980777654346599999996799988860787574640899999999


Q ss_pred             HHHHHCCCCCCEEEEECCCCC
Q ss_conf             989641556531676302243
Q gi|254780497|r  125 SYIRSGVVRRVMVIGSDTFSR  145 (324)
Q Consensus       125 ~li~~g~~~~~Lvv~~e~~S~  145 (324)
                      ..|++|..+-++..+.|.+|+
T Consensus       104 ~~I~~G~~dvviAGGvEsmS~  124 (417)
T PRK06025        104 AQIMSGMEDLVIAGGTEMMSY  124 (417)
T ss_pred             HHHHCCCCCEEEEEEEECCCC
T ss_conf             999769998678953423676


No 91 
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.47  E-value=7.5e-13  Score=101.78  Aligned_cols=223  Identities=19%  Similarity=0.208  Sum_probs=138.3

Q ss_pred             HHHHHHHHHHHHHHCCCCCCCC----EEEEECCCCCCC--------------CC-----CCCCCHHHHHHCCCCCCCCCC
Q ss_conf             9999999999974021235443----366501223345--------------89-----853100112202686444421
Q gi|254780497|r   54 SLGEAAARDALHHAEMSVDDID----LIIVATSTPDQT--------------FP-----STAVNIQNRLGMKRGFAFDMQ  110 (324)
Q Consensus        54 ~la~~Aa~~al~~a~~~~~~Id----~ii~~s~~~~~~--------------~p-----~~a~~i~~~LGl~~~~~~di~  110 (324)
                      -|+.+++++||+++|+++++++    -|+.++...++.              .+     ..+++|...+|++ .+++.+.
T Consensus        89 rl~L~~a~eAl~dAG~~~~~~~~~r~GV~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~~~-Gp~~~v~  167 (421)
T cd00833          89 RLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR-GPSLTVD  167 (421)
T ss_pred             HHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCCC
T ss_conf             999999999997528983464886349996666664788974275657853013543117999999996899-9600335


Q ss_pred             CCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC-CC----------C------CCCCC-CCCCCCCCCCCCEEEEECCCC
Q ss_conf             012200346788899896415565316763022-43----------2------22456-632323454431234402654
Q gi|254780497|r  111 AVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF-SR----------I------VDWSD-RSTCVLFGDGAGALILEGVEV  172 (324)
Q Consensus       111 ~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~-S~----------~------~d~~d-~~~~~lfGDGAaA~ll~~~~~  172 (324)
                      .+|+|++.||..|..+|++|..+.+|+.+++.. +.          .      ..+.| ....+..|+||++++|++.+.
T Consensus       168 tACaSsl~Ai~~A~~~i~~G~~d~ai~Gg~~~~~~~~~~~~~~~~~~ls~~~~~rpFD~~~~G~v~gEGa~~lvLe~~~~  247 (421)
T cd00833         168 TACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADADGYVRGEGVGVVVLKRLSD  247 (421)
T ss_pred             CHHHHHHHHHHHHHHHHHCCCCCEEEECEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHH
T ss_conf             36279999999999998579943544120003158689999863578689998567888999865557513543687899


Q ss_pred             CCCCCC--CCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             465434--454101232035555561775487654443320010320244455777777788889874001000121024
Q gi|254780497|r  173 KGSSMA--DTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVP  250 (324)
Q Consensus       173 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~  250 (324)
                      ......  ...+......+|+....               ....+        .+...+.++++|++++++++||+++-.
T Consensus       248 A~~~g~~I~a~i~G~g~~~dg~~~~---------------~~~P~--------~~~~~~~~~~al~~agi~~~~i~yiea  304 (421)
T cd00833         248 ALRDGDRIYAVIRGSAVNQDGRTKG---------------ITAPS--------GEAQAALIRRAYARAGVDPSDIDYVEA  304 (421)
T ss_pred             HHHCCCCEEEEEEEEEECCCCCCCC---------------CCCCC--------HHHHHHHHHHHHHHHCCCCCEEEEEEE
T ss_conf             9876994799998999806897778---------------88875--------668999999999972999441208997


Q ss_pred             CCCCHHH-----HHHHHHHCCCCH---HHH-H-HHHHHHCCCHHHHHHHHHHH---HHHCCCC
Q ss_conf             4444158-----999999719787---673-3-65865193301269999999---9980688
Q gi|254780497|r  251 HQANWRI-----INSIVDKMKIPF---DKV-I-VTVDIHGNTSAASIPLALAV---AVKEGRV  300 (324)
Q Consensus       251 Hq~~~~~-----~~~~~~~lgl~~---e~~-~-~~~~~~Gn~~sas~~~~L~~---~~~~g~l  300 (324)
                      |-.+-..     .+.+.+.++=..   ..+ + .+=..+||+-+++=.+.+-.   +++++.+
T Consensus       305 HgtgT~~gD~~E~~ai~~~f~~~~~~~~~~~v~S~Ks~~GH~~~AaG~~~~i~~~lal~~~~i  367 (421)
T cd00833         305 HGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVI  367 (421)
T ss_pred             ECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf             447686669999999999961257777863023543453433576799999999999855982


No 92 
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=99.47  E-value=5.5e-12  Score=96.24  Aligned_cols=99  Identities=15%  Similarity=0.188  Sum_probs=86.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             898899999999999999740212354433665012233458985310011220268-6444421012200346788899
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTADS  125 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~~  125 (324)
                      -.+.++.+|+..+++.+|++++++|++||-||++++.+....+..+.++.-..|++. +.++.|+..|.|++.|+..|..
T Consensus        22 l~~~~~~~L~a~vi~~~l~r~~i~p~~Id~Vi~G~v~~~~~g~n~AR~aaL~aGlp~~vp~~TVnr~C~SGl~Ai~~aa~  101 (392)
T PRK06633         22 LSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAAN  101 (392)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf             78898899999999999987499989999899991575665666999999976999888726887733799999999999


Q ss_pred             HHHHCCCCCCEEEEECCCCC
Q ss_conf             89641556531676302243
Q gi|254780497|r  126 YIRSGVVRRVMVIGSDTFSR  145 (324)
Q Consensus       126 li~~g~~~~~Lvv~~e~~S~  145 (324)
                      .|++|..+.++..+.|.+|.
T Consensus       102 ~I~~G~~dvviaGGvEsmS~  121 (392)
T PRK06633        102 SIMTGDNEIVIAGGQENMSL  121 (392)
T ss_pred             HHHCCCCCEEEEECCCCCCC
T ss_conf             99679986777403354554


No 93 
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.46  E-value=2e-12  Score=99.08  Aligned_cols=100  Identities=16%  Similarity=0.143  Sum_probs=83.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHH-HCCCCCCCCEEEEECCCCCC-CCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHH
Q ss_conf             89889999999999999974-02123544336650122334-5898531001122026-864444210122003467888
Q gi|254780497|r   47 GKDETTASLGEAAARDALHH-AEMSVDDIDLIIVATSTPDQ-TFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTA  123 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~-a~~~~~~Id~ii~~s~~~~~-~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A  123 (324)
                      -++.++.||+..+++.+++| ++++|++||-||+++..+.. .-...+.++.=..|++ ..+++.|+..|.|++.++..|
T Consensus        22 l~~~~~~~L~a~~i~~~l~r~~~l~~~~Id~vi~G~v~~~~~~g~n~aR~aaL~aGlp~~vpa~tVnr~C~SGl~Ai~~A  101 (387)
T PRK08947         22 FRNVRAEDLSAHLMRALLARNPALDPAEIEDIIWGCVQQTLEQGFNIARNAALLAGIPHTVPAVTVNRLCGSSMQALHDA  101 (387)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHH
T ss_conf             78899999999999999974589698998989997066554433359999999769998886166401423799999999


Q ss_pred             HHHHHHCCCCCCEEEEECCCCCC
Q ss_conf             99896415565316763022432
Q gi|254780497|r  124 DSYIRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       124 ~~li~~g~~~~~Lvv~~e~~S~~  146 (324)
                      ...|++|..+-+|+.+.|.+|+.
T Consensus       102 a~~I~~G~~dvvlaGGvEsMS~~  124 (387)
T PRK08947        102 ARAIMTGDGDVFLIGGVEHMGHV  124 (387)
T ss_pred             HHHHCCCCCCEEEEEEECCCCCC
T ss_conf             98652799778998410225778


No 94 
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=99.45  E-value=1.7e-12  Score=99.49  Aligned_cols=99  Identities=22%  Similarity=0.284  Sum_probs=86.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             98899999999999999740212354433665012233458985310011220268-64444210122003467888998
Q gi|254780497|r   48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTADSY  126 (324)
Q Consensus        48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~~l  126 (324)
                      .+.++.||+..+.+.+|+|++++|++||-||++.+.+....+..|.+++-..|++. ..++.|+..|.|++.|+..|...
T Consensus        23 ~~~~~~~L~a~~i~~~l~r~~i~p~~Id~Vi~G~v~~~~~~~n~AR~aaL~aGlp~~vp~~TVnr~C~SGl~Ai~~Aa~~  102 (426)
T PRK08170         23 GPFSASDLAVQAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIGRVAALRLGCGEDVPGWTVQRNCASGMQALDSAARN  102 (426)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf             88898999999999999974999899998999933625666779999999769998887267766123799999999999


Q ss_pred             HHHCCCCCCEEEEECCCCCC
Q ss_conf             96415565316763022432
Q gi|254780497|r  127 IRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       127 i~~g~~~~~Lvv~~e~~S~~  146 (324)
                      |++|..+.+|..+.|.+|+.
T Consensus       103 I~~G~~dvviAGGvEsMS~~  122 (426)
T PRK08170        103 IALGRADLVLAGGTEALSRA  122 (426)
T ss_pred             HHCCCCCEEEEECCCCCCCC
T ss_conf             85599888999372204567


No 95 
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=99.45  E-value=1.3e-12  Score=100.17  Aligned_cols=100  Identities=16%  Similarity=0.175  Sum_probs=83.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHH-CCCCCCCCEEEEECCCCCCC-CCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHH
Q ss_conf             898899999999999999740-21235443366501223345-898531001122026-864444210122003467888
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHA-EMSVDDIDLIIVATSTPDQT-FPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTA  123 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a-~~~~~~Id~ii~~s~~~~~~-~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A  123 (324)
                      -.+.++.+|+..+++.+|+|+ +++|++||-||++++.+.-. .+..|..+.-..|++ ...++.|+..|.|++.++..|
T Consensus        21 l~~~~~~~L~a~~i~~~l~r~~~l~~~~Id~vi~G~~~~~g~~g~n~aR~aal~aGlp~~vpa~TVnr~C~SGl~Ai~~A  100 (401)
T PRK09050         21 LSSVRADDLGAVPLKALMERNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTINRLCGSGMDAVGTA  100 (401)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHH
T ss_conf             79998899999999999973589698998959996377657455769999999779998885578601307899999999


Q ss_pred             HHHHHHCCCCCCEEEEECCCCCC
Q ss_conf             99896415565316763022432
Q gi|254780497|r  124 DSYIRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       124 ~~li~~g~~~~~Lvv~~e~~S~~  146 (324)
                      ...|++|..+.+|+.+.|.+|+.
T Consensus       101 a~~I~~G~~dv~iaGGvEsmS~~  123 (401)
T PRK09050        101 ARAIKAGEAELMIAGGVESMSRA  123 (401)
T ss_pred             HHHHHCCCCCEEEEECCCCCCCC
T ss_conf             99984799777986142355656


No 96 
>PRK06689 consensus
Probab=99.44  E-value=1e-12  Score=100.93  Aligned_cols=100  Identities=20%  Similarity=0.238  Sum_probs=85.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             898899999999999999740212354433665012233458985310011220268-6444421012200346788899
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTADS  125 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~~  125 (324)
                      -.+.++.||++.+++.+|++++++|++||-||++.+.+.-..+..|..+.=.-|++. ..++.|+..|.|++.|+..|..
T Consensus        21 l~~~~~~~L~a~~i~~~l~r~gi~p~~Id~vi~G~~~~~g~~~n~AR~aaL~aGlp~~vp~~tVnr~C~Sgl~Ai~~aa~  100 (391)
T PRK06689         21 LKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTVTGYTIQRQCSSGMQAIMSAAM  100 (391)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHH
T ss_conf             78898899999999999987499979989899980667666660999999976999888706776621578999999999


Q ss_pred             HHHHCCCCCCEEEEECCCCCC
Q ss_conf             896415565316763022432
Q gi|254780497|r  126 YIRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       126 li~~g~~~~~Lvv~~e~~S~~  146 (324)
                      .|++|..+-++..+.|.+|+.
T Consensus       101 ~I~~G~~dvviAGGvEsMS~~  121 (391)
T PRK06689        101 QIQLGVSEVVVAGGVEAMSSS  121 (391)
T ss_pred             HHHCCCCCEEEEECCCCCCCC
T ss_conf             986799865686043467777


No 97 
>PRK07937 lipid-transfer protein; Provisional
Probab=99.42  E-value=3.6e-11  Score=91.08  Aligned_cols=259  Identities=14%  Similarity=0.041  Sum_probs=148.8

Q ss_pred             CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf             92269999999649841178899988099987811024751889828988999999999999997402123544336650
Q gi|254780497|r    1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVA   80 (324)
Q Consensus         1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~   80 (324)
                      |.+|.|.|+|. .|-.+                          +. +...+..+|+++|+++||+++|++++|||.++.+
T Consensus         1 MrdVaIVGvG~-t~f~r--------------------------~~-~~~~~~~eL~~eA~~~Al~DAGl~~~DId~~~~g   52 (352)
T PRK07937          1 MRDVAVVGFAH-APHVR--------------------------RT-DGTTNGVEMLMPCFAQLYEELGITKADIGFWCSG   52 (352)
T ss_pred             CCCEEEEEEEE-CCCCC--------------------------CC-CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEE
T ss_conf             98579999640-67644--------------------------88-8898999999999999999849998999789671


Q ss_pred             CCCCCCCCCCCCCC--HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC---------CC
Q ss_conf             12233458985310--01122026864444210122003467888998964155653167630224322---------24
Q gi|254780497|r   81 TSTPDQTFPSTAVN--IQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIV---------DW  149 (324)
Q Consensus        81 s~~~~~~~p~~a~~--i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~---------d~  149 (324)
                      +.  ++.....-..  ....||.  .+.+.+++.|+++..++..|...|++|.++.+|+++.|..++..         |+
T Consensus        53 ~~--d~~~G~~~~~~~~~~~lg~--~p~~~~~~~~~sg~~Al~~A~~aI~sG~~d~vLvvG~ek~s~g~~~~~~~~~~dp  128 (352)
T PRK07937         53 SS--DYLAGRAFSFISAIDSIGA--VPPINESHVEMDAAWALYEAYIKILTGEVDTALVYGFGKSSAGTLRRVLARQLDP  128 (352)
T ss_pred             CC--CCCCCCCHHHHHHHHHCCC--CCCEEEECEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCC
T ss_conf             46--5345410135777764368--7745330102229999999999986789998999873366877533333345781


Q ss_pred             --C------------------------------------------CCC------------C-----------CCCCCCCC
Q ss_conf             --5------------------------------------------663------------2-----------32345443
Q gi|254780497|r  150 --S------------------------------------------DRS------------T-----------CVLFGDGA  162 (324)
Q Consensus       150 --~------------------------------------------d~~------------~-----------~~lfGDGA  162 (324)
                        .                                          +|.            +           +...+|||
T Consensus       129 ~~~~~~~~~~~~~~al~ar~~m~~~g~t~E~lA~Vavkn~~nA~~NP~A~~~~tvedvl~s~~ia~PL~~~dc~p~sDGA  208 (352)
T PRK07937        129 YTVAPLWPDSVSMAGLQARLGLDAGKWTEEQMAEVAADSFADARRNDSAQPSISVDELLARPYFADPLRRHDIAPITDGA  208 (352)
T ss_pred             HHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCEECCCCCHHHHCCCCCEE
T ss_conf             13133446278999999999998549999999999999988772198766789999982688355788566508878726


Q ss_pred             CEEEEECCCCCCCCCCCCCC--EEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             12344026544654344541--0123203555556177548765444332001032024445577777778888987400
Q gi|254780497|r  163 GALILEGVEVKGSSMADTGI--LSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHL  240 (324)
Q Consensus       163 aA~ll~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl  240 (324)
                      +|+||.+.+.... ..+..+  ......++....          .          .+.+     ...+.......+.+|+
T Consensus       209 aAvVl~s~e~Ar~-l~~~pv~I~g~~~~~~~~~~----------~----------~~dl-----~~~~~~~~aa~~aagi  262 (352)
T PRK07937        209 AAIVLAAGDRARE-LRERPAWITGIEHRIETPAL----------G----------ARDL-----TVSPSTAAAAEAATGG  262 (352)
T ss_pred             EEEEEECHHHHHH-CCCCCEEEEEEEEECCCCCC----------C----------CCCC-----CCCHHHHHHHHHHCCC
T ss_conf             9999955999975-66897899998984368877----------7----------6655-----2379999999997499


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH----HHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC-CCC
Q ss_conf             10001210244444158999999719787673365----8651933012699999999980688999899999971-450
Q gi|254780497|r  241 TIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT----VDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMG-GGF  315 (324)
Q Consensus       241 ~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~----~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G-~G~  315 (324)
                      +|+|||.+=+|-.--..--.+.|.|||..+ ++.|    +-- ||--.|+=+..+.++.++-+=+.|++-+--+.+ +.+
T Consensus       263 ~p~DiDvaElhD~Fs~~el~~~E~LGl~g~-~pVN~sGG~ls-ghp~gAtGl~~~~E~~~ql~~~~~~rqv~~a~~G~~~  340 (352)
T PRK07937        263 DTGDIDVAELHAPFTHQELILAEAIGLPDK-TKVNPSGGALA-ANPMFAAGLERIGFAARHIWDGSARRALAHATSGPAL  340 (352)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHCCCCCC-CCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
T ss_conf             953475788725750778999884288999-54668986210-6986428999999999998555556325767555122


Q ss_pred             CEEE
Q ss_conf             1456
Q gi|254780497|r  316 TSGT  319 (324)
Q Consensus       316 s~~a  319 (324)
                      ..+.
T Consensus       341 q~n~  344 (352)
T PRK07937        341 QQNL  344 (352)
T ss_pred             HCCE
T ss_conf             3137


No 98 
>PRK08234 consensus
Probab=99.42  E-value=1.8e-12  Score=99.38  Aligned_cols=99  Identities=16%  Similarity=0.223  Sum_probs=84.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHH-CCCCCCCCEEEEECCCCCCC-CCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             98899999999999999740-21235443366501223345-898531001122026-8644442101220034678889
Q gi|254780497|r   48 KDETTASLGEAAARDALHHA-EMSVDDIDLIIVATSTPDQT-FPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTAD  124 (324)
Q Consensus        48 ~~e~~~~la~~Aa~~al~~a-~~~~~~Id~ii~~s~~~~~~-~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~  124 (324)
                      .+.++.+|++.+++.+++|. +++|++||-||++.+.+... .+..+..+.-.-|++ ...++.|+..|.|++.|+..|.
T Consensus        22 ~~~~~~~L~a~~i~~~l~r~~~~~~~~Id~vi~G~v~~~g~~~~n~aR~aaL~aGlp~~vpa~tVnr~C~SGl~Ai~~Aa  101 (400)
T PRK08234         22 RDVRPDDLAAVVIRALIERNPNVPVEQIDDVVFGNANQAGEDNRNVARMAALLAGLPVEVAGVTVNRLCGSGLDAVAYAA  101 (400)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHH
T ss_conf             88988999999999999746896989989899990676564446699999997699988861677153035999999999


Q ss_pred             HHHHHCCCCCCEEEEECCCCCC
Q ss_conf             9896415565316763022432
Q gi|254780497|r  125 SYIRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       125 ~li~~g~~~~~Lvv~~e~~S~~  146 (324)
                      ..|++|..+.+|+.+.|.+|+.
T Consensus       102 ~~I~~G~~dvviagGvEsmS~~  123 (400)
T PRK08234        102 RAIWAGEGEIMIAGGTESMTRA  123 (400)
T ss_pred             HHHHCCCCCEEEECCCCCCCCC
T ss_conf             9985899757885152443436


No 99 
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=99.40  E-value=1.6e-11  Score=93.24  Aligned_cols=100  Identities=14%  Similarity=0.090  Sum_probs=84.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             898899999999999999740212354433665012233458985310011220268-6444421012200346788899
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTADS  125 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~~  125 (324)
                      -.+.++.||+..+++.+|+|++++|++||-||++++.+.-..+..|..+.=.-|++. ..++.|+..|.|++.++..|..
T Consensus        26 l~~~~~~~L~~~~i~~~l~r~gi~~~~iD~vi~G~v~~~g~~~n~aR~~aL~aGlp~~vp~~TVnr~C~SGl~Ai~~Aa~  105 (428)
T PRK09268         26 YADASNQDMLTAALDGLVERFGLHGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPETPAYDLQQACGTGLEAAILVAN  105 (428)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHH
T ss_conf             78898899999999999998299989999899993576565653999999966989888726885275799999999999


Q ss_pred             HHHHCCCCCCEEEEECCCCCC
Q ss_conf             896415565316763022432
Q gi|254780497|r  126 YIRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       126 li~~g~~~~~Lvv~~e~~S~~  146 (324)
                      .|++|..+.++..+.|.+|+.
T Consensus       106 ~I~~G~~dvviAGGvEsmS~~  126 (428)
T PRK09268        106 KIALGQIDSGIAGGVDTTSDA  126 (428)
T ss_pred             HHHCCCCCEEEEECCCCCCCC
T ss_conf             998799988999461235678


No 100
>PRK07855 lipid-transfer protein; Provisional
Probab=99.40  E-value=5.2e-11  Score=90.05  Aligned_cols=253  Identities=14%  Similarity=0.142  Sum_probs=141.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCC-CCCCCCCCHHHHHHHHHHH
Q ss_conf             988999999999999997402123544336650122334589853100112202686444-4210122003467888998
Q gi|254780497|r   48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAF-DMQAVCSGFVYAVTTADSY  126 (324)
Q Consensus        48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~-di~~~C~~~~~al~~A~~l  126 (324)
                      ++.+..+|+.+|+++||+++|++++|||.+++.+..   ..+  ...+.+.+|+.+...+ .+..+|+++..++..|...
T Consensus        20 ~~~s~~~L~~eA~~~AL~DAGl~~~dIDg~~~~~~~---~~~--~~~ia~~lG~~~~~~~~~v~~~g~s~~~~~~~A~~a   94 (386)
T PRK07855         20 SGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMD---TNP--EIAVARAVGIGELKFFSQIGYGGGAACATVQQAAMA   94 (386)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECC---CCC--HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             998999999999999999759999996999896078---882--899999719988753221478855799999999999


Q ss_pred             HHHCCCCCCEEEEECCCCC-------------------------------------------CC----------------
Q ss_conf             9641556531676302243-------------------------------------------22----------------
Q gi|254780497|r  127 IRSGVVRRVMVIGSDTFSR-------------------------------------------IV----------------  147 (324)
Q Consensus       127 i~~g~~~~~Lvv~~e~~S~-------------------------------------------~~----------------  147 (324)
                      |++|.++.+|++.++....                                           +.                
T Consensus        95 IasG~~d~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~G~~~p~~~~Al~a~rym~~yG~t~E~lA~Vavk  174 (386)
T PRK07855         95 VATGVADVVVAYRAFNERSGMRFGQVQTGLATNPTSEGVDYGWSYPHGLLTPAAWVAMIARRYMHEYGATSEDFGRVAVA  174 (386)
T ss_pred             HHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf             97387778999974146763223667555555533233331100234677668899999999999979599999999999


Q ss_pred             -------C----CCCC-CC------------------CCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCE
Q ss_conf             -------2----4566-32------------------3234544312344026544654344541012320355555617
Q gi|254780497|r  148 -------D----WSDR-ST------------------CVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKL  197 (324)
Q Consensus       148 -------d----~~d~-~~------------------~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (324)
                             |    +..+ -+                  +...+|||+|+||.+.+.........-.+.......+  .+..
T Consensus       175 nr~nA~~NP~A~~~~~~iT~edvl~S~~Ia~PL~lldc~~~sDGAaAvVl~s~e~A~~~~~~pv~i~~~~~g~~--~~~~  252 (386)
T PRK07855        175 DRKHAATNPKAFFYGKPITLEDHQNSRWIAEPLRLLDCCQETDGAVAIVVTSAERARDLKQRPAVIEAAAQGSG--ADQY  252 (386)
T ss_pred             HHHHHHCCCHHHHCCCCCCHHHHHCCCCCCCCCHHHHCCCCCCCEEEEEEECHHHHHHCCCCCEEEEEEEEEEC--CCCC
T ss_conf             99987419598873789889998516671665457553887884389999449999756899779999998713--6765


Q ss_pred             EECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH----HHH
Q ss_conf             7548765444332001032024445577777778888987400100012102444441589999997197876----733
Q gi|254780497|r  198 YVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD----KVI  273 (324)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~~  273 (324)
                               ......+.+   +  ...+......+++++++|++++|||.+-+|-.--..--...|.||+-+.    +++
T Consensus       253 ---------~~~~~~~~d---~--~~~~~~~~aa~~ay~~AGi~p~DiDv~e~~D~Ft~~el~~lE~lG~c~~Ge~~~~v  318 (386)
T PRK07855        253 ---------TMTSYYRDD---L--TGLPEMGLVARQLWRQSGLGPADIQTAILYDHFTPFVLMQLEELGFCGRGEAKDFI  318 (386)
T ss_pred             ---------CCCCCCCCC---C--CCCCHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHCCCCCCCCHHHHH
T ss_conf             ---------544334564---4--45627999999999984999788726763067709999999984998898379999


Q ss_pred             H------------H----HHHHCCCHHHHHHHHHHHHHHC---CCCCCCCEEEEEEECCCCCEEEEEE
Q ss_conf             6------------5----8651933012699999999980---6889998999999714501456878
Q gi|254780497|r  274 V------------T----VDIHGNTSAASIPLALAVAVKE---GRVKKGDCLLLEAMGGGFTSGTVLL  322 (324)
Q Consensus       274 ~------------~----~~~~Gn~~sas~~~~L~~~~~~---g~l~~Gd~vll~~~G~G~s~~a~ll  322 (324)
                      .            |    +--.||...++-.....+-++-   +++ +|-+..|+.-|.|...++++|
T Consensus       319 ~~G~~~~~G~~PvN~sGGlls~gh~~G~~gv~Eav~QLrG~A~~QV-~~a~~alv~~~gG~~~~~~~l  385 (386)
T PRK07855        319 ADGAIEIGGRLPINTHGGQLGEAYIHGMNGIAEAVRQLRGTSVNQV-PGVEHVLVTAGTGVPTSGLIL  385 (386)
T ss_pred             HCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCCC-CCHHEEEEECCCCHHHHHHCC
T ss_conf             7799557997146589700146764307789999999748641359-940458893898444433015


No 101
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.34  E-value=1.3e-11  Score=93.90  Aligned_cols=270  Identities=15%  Similarity=0.164  Sum_probs=148.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHH-CCCCCCCCEEEEECCCCCCC-CCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHH
Q ss_conf             98899999999999999740-21235443366501223345-8985310011220268-644442101220034678889
Q gi|254780497|r   48 KDETTASLGEAAARDALHHA-EMSVDDIDLIIVATSTPDQT-FPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTAD  124 (324)
Q Consensus        48 ~~e~~~~la~~Aa~~al~~a-~~~~~~Id~ii~~s~~~~~~-~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~  124 (324)
                      .+.++.+|+..+++.+|+|+ +++|++||-||++++.+.-. -...+.+.+-.-|++. ..++.|+..|.|++.|+..|.
T Consensus        27 ~~~~~~~L~a~~i~~~l~r~~~l~~~~Id~vi~G~~~~~~~~g~n~aR~aal~aGlp~~vp~~tVnr~C~SGl~Ai~~Aa  106 (399)
T PRK09052         27 KNTRPDDLLAHVLRAAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVNRFCASGLQAVAMAA  106 (399)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHH
T ss_conf             88998999999999999865797989989799970644565566899999997599988871578651336899999999


Q ss_pred             HHHHHCCCCCCEEEEECCCCCCCCCCCC------------CCCCCCCCCCCEE------EEECCCCCC------------
Q ss_conf             9896415565316763022432224566------------3232345443123------440265446------------
Q gi|254780497|r  125 SYIRSGVVRRVMVIGSDTFSRIVDWSDR------------STCVLFGDGAGAL------ILEGVEVKG------------  174 (324)
Q Consensus       125 ~li~~g~~~~~Lvv~~e~~S~~~d~~d~------------~~~~lfGDGAaA~------ll~~~~~~~------------  174 (324)
                      ..|++|..+-+++.+.|.+|+.--..++            ....-++-|-+|=      =++|++...            
T Consensus       107 ~~I~~G~~dvviaGG~EsMS~~P~~~~~~~~~~~~~~~~~~~~~~~~Mg~tAE~~A~~~~isRe~qD~~A~~Sh~rA~~A  186 (399)
T PRK09052        107 DRIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDENVGIAYGMGLTAEKVAEQWKVSREDQDAFALESHQKAIAA  186 (399)
T ss_pred             HHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf             99868998889861520246686567877778044236867544446888999999996989999999999999999998


Q ss_pred             --CCCCCCCCEEEEEEC---CCCC------CCCEEECCCCCCCC-------CCCCHHH-------------CCHH-----
Q ss_conf             --543445410123203---5555------56177548765444-------3320010-------------3202-----
Q gi|254780497|r  175 --SSMADTGILSTYLCS---DGSY------IDKLYVDGGPSTSR-------TVGCIRM-------------EGKA-----  218 (324)
Q Consensus       175 --~~~~~~~~~~~~~~~---~~~~------~~~~~~~~~~~~~~-------~~~~~~~-------------~g~~-----  218 (324)
                        ......+++......   +...      ...+..+.+.....       ....|+.             ||-.     
T Consensus       187 ~~~G~f~~EIvPv~v~~~~~~~~~~~~~~~~~~~~~De~~R~~tt~e~La~Lkp~F~~~GtvTAgNsS~lsDGAAavll~  266 (399)
T PRK09052        187 QQAGEFKDEITPYEIVERFPDLATGEIDVKTRTIDLDEGPRADTSLEGLAKLKPVFANKGSVTAGNSSQTSDGAGAVILV  266 (399)
T ss_pred             HHCCCCHHHEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCCCEECHHCCCCCCHHHHHHHH
T ss_conf             76597532164478422456654453234545754688867897888872467752799857842358443067888773


Q ss_pred             ----HH--------------------HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH
Q ss_conf             ----44--------------------455777777788889874001000121024444415899999971978767336
Q gi|254780497|r  219 ----VF--------------------KYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIV  274 (324)
Q Consensus       219 ----~~--------------------~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~  274 (324)
                          ..                    ......-...+.++|+++||+++|||+|=+|-+-....-.+.+.|++++||+..
T Consensus       267 s~~~a~~~gl~plAri~~~~~~g~~P~~m~~gPv~A~~k~L~~agl~~~Did~~EinEAFA~~~l~~~~~l~id~~kvN~  346 (399)
T PRK09052        267 SEKALKQFNLTPLARFVSFAVAGVPPEIMGIGPIEAIPAALKQAGLKQDDLDWIELNEAFAAQSLAVIRDLGLDPSKVNP  346 (399)
T ss_pred             HHHHHHHCCCCEEEEEEEEEEEECCHHHHCCCHHHHHHHHHHHCCCCHHHCCEEEEHHHHHHHHHHHHHHHCCCHHHCCC
T ss_conf             49999976997279999547998287885768999999999983998667787886034388899999982997989699


Q ss_pred             H--HHHHCCCHH---HHHHHHHHHHHHCCCCCCCCEEEE-EEECCCCCEEEE
Q ss_conf             5--865193301---269999999998068899989999-997145014568
Q gi|254780497|r  275 T--VDIHGNTSA---ASIPLALAVAVKEGRVKKGDCLLL-EAMGGGFTSGTV  320 (324)
Q Consensus       275 ~--~~~~Gn~~s---as~~~~L~~~~~~g~l~~Gd~vll-~~~G~G~s~~a~  320 (324)
                      +  -=-+||=..   +-+...|-+.++.   +.+.+.+. ...|.|.-...+
T Consensus       347 ~GGaiAlGHP~GasGari~~tl~~~L~~---~~~~~G~~s~C~ggG~g~A~~  395 (399)
T PRK09052        347 LGGAIALGHPLGATGAIRTATVVHGLRR---TNLKYGMVTMCVGTGMGAAGI  395 (399)
T ss_pred             CCCHHHHCCCCCCCHHHHHHHHHHHHHH---CCCCEEEEEECCCCCCEEEEE
T ss_conf             8778874887031099999999999987---099989999724445077999


No 102
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.34  E-value=6.1e-11  Score=89.61  Aligned_cols=99  Identities=21%  Similarity=0.269  Sum_probs=81.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC-CCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHH
Q ss_conf             8988999999999999997402123544336650122334-58985310011220268-644442101220034678889
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQ-TFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTAD  124 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~-~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~  124 (324)
                      -.+.++.+|+..+++.+|+|++++ .+||-||++...+.- .-...+.++.-.-|++. ..++.|+..|.|++.++..|.
T Consensus        16 l~~~~~~~L~a~~i~~~l~r~~i~-~~id~vi~G~~~~~~~~g~n~aR~aal~aGlp~~vp~~TVnr~C~SGl~Ai~~aa   94 (384)
T PRK07661         16 LKTVRPDDLGALVVKETLKRANYE-GPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITINRYCSSGLQSIAYGA   94 (384)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCC-CCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHH
T ss_conf             899999999999999999860989-6359699994766465566699999997699988772677350216899999999


Q ss_pred             HHHHHCCCCCCEEEEECCCCCC
Q ss_conf             9896415565316763022432
Q gi|254780497|r  125 SYIRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       125 ~li~~g~~~~~Lvv~~e~~S~~  146 (324)
                      ..|++|..+-+|..+.|.+|+.
T Consensus        95 ~~I~~G~~dvviAGGvEsMS~~  116 (384)
T PRK07661         95 ERIMLGHSEAVLAGGAESMSLV  116 (384)
T ss_pred             HHHHCCCCCEEEECCEECCCCC
T ss_conf             9997699767875462122578


No 103
>TIGR02845 spore_V_AD stage V sporulation protein AD; InterPro: IPR010894   This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation ..
Probab=99.33  E-value=2.2e-11  Score=92.46  Aligned_cols=235  Identities=20%  Similarity=0.297  Sum_probs=152.1

Q ss_pred             CCCHHHHH-----HHHHHHHHHHHCCCCC--CCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             88999999-----9999999974021235--4433665012233458985310011220268644442101220034678
Q gi|254780497|r   49 DETTASLG-----EAAARDALHHAEMSVD--DIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVT  121 (324)
Q Consensus        49 ~e~~~~la-----~~Aa~~al~~a~~~~~--~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~  121 (324)
                      +|++.+||     .+|++.||+|+++..+  +||+++-+= ...+..  +++.+++.||+|-   |-+=++||-++-+|-
T Consensus        42 ge~SwEkAEr~lm~~Av~~aL~Ka~l~~~PP~vD~~LAGD-LLNQ~~--~anFvAR~L~iPf---lGLygACsTs~E~L~  115 (331)
T TIGR02845        42 GEDSWEKAERKLMEDAVNLALKKANLKKDPPDVDFFLAGD-LLNQII--TANFVARELGIPF---LGLYGACSTSMETLA  115 (331)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHH-HHHHHH--HHHHHHHHCCCCC---EECCCHHHHHHHHHH
T ss_conf             7201899999999999999875358712787211120103-666789--9989887458882---340213578999999


Q ss_pred             HHHHHHHHCCCCCCEEEEECCCC---CCCCC-C----C-CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf             88998964155653167630224---32224-5----6-63232345443123440265446543445410123203555
Q gi|254780497|r  122 TADSYIRSGVVRRVMVIGSDTFS---RIVDW-S----D-RSTCVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGS  192 (324)
Q Consensus       122 ~A~~li~~g~~~~~Lvv~~e~~S---~~~d~-~----d-~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~  192 (324)
                      ++..+|..|-.+++|.-.+--++   |=++| +    + |.++-.-==||+|+||++.+...+      | ..  -|-|+
T Consensus       116 ~gA~lv~GGfAd~vLaAtSSHy~taERQFRYPTEyG~Qkp~tAq~TVTGAGA~~l~~~~~~~~------i-t~--aT~Gk  186 (331)
T TIGR02845       116 LGAMLVDGGFADRVLAATSSHYATAERQFRYPTEYGVQKPPTAQWTVTGAGAVLLASTGGGPR------I-TS--ATIGK  186 (331)
T ss_pred             HHHHHHHCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHEEEECCCCCCCE------E-EE--EEEEE
T ss_conf             999998320022111121111353221025651256115998861250346486544789436------4-14--53014


Q ss_pred             CCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC---CCHHHHHHHHHHC-CCC
Q ss_conf             556177548765444332001032024445577777778888987400100012102444---4415899999971-978
Q gi|254780497|r  193 YIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQ---ANWRIINSIVDKM-KIP  268 (324)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq---~~~~~~~~~~~~l-gl~  268 (324)
                      -.|     .|-..+.+.+          .-+.+...+.|...|++.|.+++|.|.+++=-   .++.|.+.++++= |++
T Consensus       187 V~D-----~G~~dP~~mG----------~AMAPAAaDTI~~Hf~dtg~~~~DYDLIvTGDL~rvG~~I~~~LL~e~yg~~  251 (331)
T TIGR02845       187 VVD-----LGLTDPLDMG----------AAMAPAAADTIEAHFKDTGRSVDDYDLIVTGDLARVGSEILRKLLKEEYGYD  251 (331)
T ss_pred             EEE-----CCCCCCCCHH----------HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCC
T ss_conf             771-----2336864113----------5412689999999998707880401367873300214899999988860875


Q ss_pred             HHHHHH-----HH----HHH-----CCCHHHHHHHH-HHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf             767336-----58----651-----93301269999-99999806889998999999714501
Q gi|254780497|r  269 FDKVIV-----TV----DIH-----GNTSAASIPLA-LAVAVKEGRVKKGDCLLLEAMGGGFT  316 (324)
Q Consensus       269 ~e~~~~-----~~----~~~-----Gn~~sas~~~~-L~~~~~~g~l~~Gd~vll~~~G~G~s  316 (324)
                      -.+-+.     .+    ++.     |--.||.+... |=+-+++|+|   .|+|+++.|+=+|
T Consensus       252 ~~~~Y~DCG~~IY~~dqqdV~AGGSG~ACSAvV~yGyll~~l~~G~l---~k~LvvaTGALLS  311 (331)
T TIGR02845       252 VTEKYDDCGVMIYRPDQQDVFAGGSGCACSAVVTYGYLLKELKRGKL---KKVLVVATGALLS  311 (331)
T ss_pred             CCCEECCCCEEEECCCCCCCCCCCCCCCHHHEEHHHHHHHHHHCCCC---EEEEEEECCHHHH
T ss_conf             00010456467533887810577856650332113789999836971---2788885103322


No 104
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=99.33  E-value=2.6e-10  Score=85.52  Aligned_cols=248  Identities=18%  Similarity=0.116  Sum_probs=145.4

Q ss_pred             CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCC-CC-CCCCEEE
Q ss_conf             922699999996498411788999880999878110247518898289889999999999999974021-23-5443366
Q gi|254780497|r    1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEM-SV-DDIDLII   78 (324)
Q Consensus         1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~-~~-~~Id~ii   78 (324)
                      |++|.|.|+|.. |-.+                          +  .++.+..+|+.+|+++||+++|+ +| .|||.++
T Consensus         1 M~~VaIvGvG~t-~f~~--------------------------~--~~d~s~~eL~~eA~~~Al~DAG~~~~~~did~~~   51 (375)
T PRK06066          1 MMRVAIVGIGWY-GFKP--------------------------T--TPDLSFREMMFEAAVRAYEDAGGINPRRDVDAFI   51 (375)
T ss_pred             CCEEEEEECCCC-CCCC--------------------------C--CCCCCHHHHHHHHHHHHHHHCCCCCCHHHEEEEE
T ss_conf             970899961367-7689--------------------------9--9998999999999999999679998665600676


Q ss_pred             EECCCCCCCCC-CCC-CCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC--------
Q ss_conf             50122334589-853-10011220268644442101220034678889989641556531676302243222--------
Q gi|254780497|r   79 VATSTPDQTFP-STA-VNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVD--------  148 (324)
Q Consensus        79 ~~s~~~~~~~p-~~a-~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d--------  148 (324)
                      .+.  +++... ..+ ....+.+|....   .+...|+++..++..|...|++|.++.+||++.+..+....        
T Consensus        52 ~~~--~~~~~g~~~~~~~~~~~lG~~~~---p~~~v~~~G~~al~~A~~aIaSG~~dvvlv~g~~k~s~~~~~~~~~~~~  126 (375)
T PRK06066         52 SCQ--EDFWEGIAISDEFAPDPIGGAMR---PTMTVAGDGLQGLAHAYMHINSGLADVVVVESHAKPSDILTFPDVVKFA  126 (375)
T ss_pred             ECC--CCCCCCHHHHHHHHHHHHCCCCC---CEEEEECHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHCC
T ss_conf             613--33344055787765876246678---5488527799999999999971988889997044667766511144404


Q ss_pred             ----CCC-------------------------------------------CC--------------C-----------CC
Q ss_conf             ----456-------------------------------------------63--------------2-----------32
Q gi|254780497|r  149 ----WSD-------------------------------------------RS--------------T-----------CV  156 (324)
Q Consensus       149 ----~~d-------------------------------------------~~--------------~-----------~~  156 (324)
                          |..                                           |.              +           +.
T Consensus       127 ~d~~~~~~~g~~~~~~~~al~A~rym~~yG~t~E~lA~vavk~r~~A~~NP~A~~~~~~t~edvl~s~~ia~PL~~~dc~  206 (375)
T PRK06066        127 MDPIYLRPLGPPNPHFLAGLEAVKFMARRGVTREDLALVVEKNKKAGLKNPRASYASNVSLDDVLSSEYVVYPLTELDIA  206 (375)
T ss_pred             CCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHCCCCCEECCCCCCCCC
T ss_conf             68550023687659999999999999886979999999999999988539840306999999980797650575300226


Q ss_pred             CCCCCCCEEEEECCCCCCCCCCCCCC--EEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf             34544312344026544654344541--0123203555556177548765444332001032024445577777778888
Q gi|254780497|r  157 LFGDGAGALILEGVEVKGSSMADTGI--LSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKV  234 (324)
Q Consensus       157 lfGDGAaA~ll~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~  234 (324)
                      ..+|||+|+||.+.+.... ..+..+  ......++....          ......            .........+++
T Consensus       207 ~~sDGAaA~Vv~s~~~A~~-~~~~pv~i~g~g~~~~~~~~----------~~~~~~------------~~~~~~~a~~~A  263 (375)
T PRK06066        207 PFVDGAIVVVLASEEVARK-LTDTPVWIKGIGWATDTSNL----------ETADLG------------KAMYMRKAADMA  263 (375)
T ss_pred             CCCCCEEEEEEECHHHHHH-CCCCCEEEEEEEEECCCCCC----------CCCCCC------------CCHHHHHHHHHH
T ss_conf             6768428999935899975-68998899999985268776----------622345------------336899999999


Q ss_pred             HHHHHCCC--CCCCCCCCCCCCHHHHHHHHHHCCCCHHH--HH------------HH----HHHHCCCHHHHHHHHHHHH
Q ss_conf             98740010--00121024444415899999971978767--33------------65----8651933012699999999
Q gi|254780497|r  235 FDSTHLTI--ENIDWFVPHQANWRIINSIVDKMKIPFDK--VI------------VT----VDIHGNTSAASIPLALAVA  294 (324)
Q Consensus       235 L~~~gl~~--~did~~~~Hq~~~~~~~~~~~~lgl~~e~--~~------------~~----~~~~Gn~~sas~~~~L~~~  294 (324)
                      .+.+|++.  +|||.+-+|-.-....-...|.||+..+-  ++            .|    +--+||...++=+..+.++
T Consensus       264 y~~Agi~~p~~DiDv~elyD~ft~~~l~~lE~lG~~geg~~~~~~G~~~~~G~~PvNtsGG~ls~Ghp~ga~G~~~~~E~  343 (375)
T PRK06066        264 YKMAGIASPAKEVDFAFVDDRYSYKELQHIEALGLAGKAAKDLREGYFEPGGELPVNPSGGHLAKGVPLEASGLSLLLDA  343 (375)
T ss_pred             HHHCCCCCCHHHCCEEEECCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEECCCCHHHCCCCCCHHHHHHHHHH
T ss_conf             99807999866661557516661999999998489842889997799567998206089824428985750699999999


Q ss_pred             HHCCCCCCCCE
Q ss_conf             98068899989
Q gi|254780497|r  295 VKEGRVKKGDC  305 (324)
Q Consensus       295 ~~~g~l~~Gd~  305 (324)
                      .++-+=+.|++
T Consensus       344 ~~QLrg~ag~R  354 (375)
T PRK06066        344 VEYLRQGGVER  354 (375)
T ss_pred             HHHHHCCCCCC
T ss_conf             99974353043


No 105
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=99.32  E-value=1e-10  Score=88.21  Aligned_cols=100  Identities=17%  Similarity=0.167  Sum_probs=83.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHHH-CCCCCCCCEEEEECCCCCCC-CCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHH
Q ss_conf             898899999999999999740-21235443366501223345-8985310011220268-64444210122003467888
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHA-EMSVDDIDLIIVATSTPDQT-FPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTA  123 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a-~~~~~~Id~ii~~s~~~~~~-~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A  123 (324)
                      -.+.++.||+..+.+.+++|+ +++|++||-||++.+.+... .+..+..+.-..|++. ..++.|+..|.|++.|+..|
T Consensus        21 l~~~~~~~L~a~~i~~~l~r~~~i~~~~Id~Vi~G~~~~~g~~g~n~aR~~aL~aGlp~~vpa~TVnr~C~SGl~Ai~~a  100 (400)
T PRK13359         21 LSSVRADDLGAVPLKALVERNRDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGTTINRLCGSGMDAVGVA  100 (400)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHH
T ss_conf             79998899999999999972699798999979998277556545768999999769998876267613211499999999


Q ss_pred             HHHHHHCCCCCCEEEEECCCCCC
Q ss_conf             99896415565316763022432
Q gi|254780497|r  124 DSYIRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       124 ~~li~~g~~~~~Lvv~~e~~S~~  146 (324)
                      ...|++|..+-+|..+.|.+|+.
T Consensus       101 a~~I~~G~~dvviAGGvEsmS~~  123 (400)
T PRK13359        101 ARAIKSGEAALMIAGGVESMSRA  123 (400)
T ss_pred             HHHHHCCCCCEEEECCEECCCCC
T ss_conf             99985799887885155115556


No 106
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.24  E-value=2.4e-10  Score=85.77  Aligned_cols=267  Identities=18%  Similarity=0.176  Sum_probs=141.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             89889999999999999974021235443366501223345898531001122026-86444421012200346788899
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADS  125 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~  125 (324)
                      -.+.++.||+..+++.+.++   .|++||-||++.+.+.  -...+.++.-..|++ ...++.|+..|.|++.|+..|..
T Consensus        20 l~~~~~~~L~~~~i~~l~~~---~~~~Id~vi~G~v~~~--g~n~aR~aaL~aGlp~~vp~~tVnr~C~SGl~Av~~aa~   94 (361)
T PRK06690         20 LKDYEVQQLAAPLLTFLSKG---MERAIDDVILGNVVGP--GGNVARLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACH   94 (361)
T ss_pred             CCCCCHHHHHHHHHHHHHHC---CCCCCCEEEEEECCCC--CCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHH
T ss_conf             78998899999999999727---9111685999956776--750999999975999888758887531588999999999


Q ss_pred             HHHHCCCCCCEEEEECCCCCCCCCC-CCCCCCCCCCC---CCEEE------EECCCCCC--------------CCCCCCC
Q ss_conf             8964155653167630224322245-66323234544---31234------40265446--------------5434454
Q gi|254780497|r  126 YIRSGVVRRVMVIGSDTFSRIVDWS-DRSTCVLFGDG---AGALI------LEGVEVKG--------------SSMADTG  181 (324)
Q Consensus       126 li~~g~~~~~Lvv~~e~~S~~~d~~-d~~~~~lfGDG---AaA~l------l~~~~~~~--------------~~~~~~~  181 (324)
                      .|++|..+-++..+.|.+|+.--.. .+.....++|-   -+|-.      +++.+...              ......+
T Consensus        95 ~I~~G~~dvviAGGvEsmS~~P~~~~~~~~~~~~~d~~MG~tAE~vA~~~~isRe~qDe~A~~Sh~rA~~A~~~G~f~~E  174 (361)
T PRK06690         95 FIQGGAGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKGYIHEE  174 (361)
T ss_pred             HHHCCCCCEEEECCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             99679999899847014012521145677854347965899999999984979999999999989999999874985211


Q ss_pred             CEEEE------EECCCCCCCC------EEECCCC-----CCCCCCC---CHHH-------CCHH-H------------HH
Q ss_conf             10123------2035555561------7754876-----5444332---0010-------3202-4------------44
Q gi|254780497|r  182 ILSTY------LCSDGSYIDK------LYVDGGP-----STSRTVG---CIRM-------EGKA-V------------FK  221 (324)
Q Consensus       182 ~~~~~------~~~~~~~~~~------~~~~~~~-----~~~~~~~---~~~~-------~g~~-~------------~~  221 (324)
                      ++...      ...+.+....      ...+.+.     ......+   .+-+       .|-. +            ..
T Consensus       175 IvPv~~~~de~~~~~~~~e~ll~~l~P~f~~~GtvTAgNsS~~sDGAAavll~se~~A~~~gl~p~ariv~~a~~g~~P~  254 (361)
T PRK06690        175 ILSFNGLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDPN  254 (361)
T ss_pred             CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEECCCCCCCCCHHHHHHHHCHHHHHHCCCCCEEEEEEEEEEEECHH
T ss_conf             37666512566789987798863289853678844342167300078999985799999779980699986789974835


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH--HHHCCCH---HHHHHHHHHHHHH
Q ss_conf             5577777778888987400100012102444441589999997197876733658--6519330---1269999999998
Q gi|254780497|r  222 YAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTV--DIHGNTS---AASIPLALAVAVK  296 (324)
Q Consensus       222 ~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~--~~~Gn~~---sas~~~~L~~~~~  296 (324)
                      .....-...++++|+++|++++|||.|=+|-+--...-...+.|++++||+..+-  =-+||=-   .+-+...|-+.++
T Consensus       255 ~m~~~Pi~A~~~~L~~agl~~~Did~~EinEAFA~q~l~~~~~l~id~~kvN~~GGaiAlGHP~GasGaRi~~tl~~~L~  334 (361)
T PRK06690        255 LPGTGPIFAVNKLLNEMNMKVEDIDYFEINEAFASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAK  334 (361)
T ss_pred             HCCCCHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf             54825699999999975997122651120267788899999983898888499855887488803458999999999998


Q ss_pred             CCCCCCCCEEEE-EEECCCCCEEEEEE
Q ss_conf             068899989999-99714501456878
Q gi|254780497|r  297 EGRVKKGDCLLL-EAMGGGFTSGTVLL  322 (324)
Q Consensus       297 ~g~l~~Gd~vll-~~~G~G~s~~a~ll  322 (324)
                      .   +.|.+.+. ...|.|.-. ++++
T Consensus       335 ~---~~~~~Gl~s~C~ggG~g~-A~ii  357 (361)
T PRK06690        335 R---ERMKYGIATLGIGGGIGL-ALLF  357 (361)
T ss_pred             H---CCCCEEEEEECCCCCHHH-EEEE
T ss_conf             7---199989999633023314-7999


No 107
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.17  E-value=1.9e-09  Score=80.08  Aligned_cols=215  Identities=18%  Similarity=0.181  Sum_probs=134.9

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCE----EEEECCCCCCCCCC-------------------CCCCHHHHHHCCCCCCCCCCC
Q ss_conf             9999999999740212354433----66501223345898-------------------531001122026864444210
Q gi|254780497|r   55 LGEAAARDALHHAEMSVDDIDL----IIVATSTPDQTFPS-------------------TAVNIQNRLGMKRGFAFDMQA  111 (324)
Q Consensus        55 la~~Aa~~al~~a~~~~~~Id~----ii~~s~~~~~~~p~-------------------~a~~i~~~LGl~~~~~~di~~  111 (324)
                      |..+-+-++|+++|+.|+.+..    |..+....+|....                   .+++|...|+++ .+.+.|..
T Consensus        94 llLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~-GPs~~vdt  172 (1061)
T COG3321          94 LLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLS-GPSVTVDT  172 (1061)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHCCCHHEEECC-CCCCCCCC
T ss_conf             99999999999759992225674248996565666444232221235522102542202101012204345-78542223


Q ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC---------CCC--CC-------CCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf             12200346788899896415565316763022---------432--22-------4566323234544312344026544
Q gi|254780497|r  112 VCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF---------SRI--VD-------WSDRSTCVLFGDGAGALILEGVEVK  173 (324)
Q Consensus       112 ~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~---------S~~--~d-------~~d~~~~~lfGDGAaA~ll~~~~~~  173 (324)
                      +|++.+.|+++|+..|.+|++..+|+-+....         ++.  +.       +......+..|.|+++++|.+-...
T Consensus       173 aCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG~g~vvLKrl~~A  252 (1061)
T COG3321         173 ACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAGVVVLKRLSDA  252 (1061)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCHHHCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEHHHH
T ss_conf             67678999999999875487201320222103586044434430355866775787555786687214689986258878


Q ss_pred             CCCC--CCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             6543--44541012320355555617754876544433200103202444557777777888898740010001210244
Q gi|254780497|r  174 GSSM--ADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPH  251 (324)
Q Consensus       174 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~H  251 (324)
                      ....  ...-+..+....||+..               +....        ......+++++.|+++++++++|+++=.|
T Consensus       253 ~~dgd~IyavI~gsavn~dG~~~---------------gltaP--------~~~aQ~~v~~~al~~a~i~p~tv~yvEaH  309 (1061)
T COG3321         253 ERDGDRIYAVIRGSAVNQDGRSN---------------GLTAP--------NLEAQADVIREALADAGIDPATVQYVEAH  309 (1061)
T ss_pred             HHCCCEEEEEEEEEEEECCCCCC---------------CCCCC--------CHHHHHHHHHHHHHHCCCCCCCCEEEEEC
T ss_conf             75799179999502550577656---------------74478--------88899999999998559990335167611


Q ss_pred             CCCHHH-----HHHHHHHCCCC-HHHHH---HHHHHHCCCHHHHHHHHHHH
Q ss_conf             444158-----99999971978-76733---65865193301269999999
Q gi|254780497|r  252 QANWRI-----INSIVDKMKIP-FDKVI---VTVDIHGNTSAASIPLALAV  293 (324)
Q Consensus       252 q~~~~~-----~~~~~~~lgl~-~e~~~---~~~~~~Gn~~sas~~~~L~~  293 (324)
                      ..+...     +..+.+..+-. +++..   +.-.++||+.+|.=...|-+
T Consensus       310 gTGT~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK  360 (1061)
T COG3321         310 GTGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIK  360 (1061)
T ss_pred             CCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf             477656478999889998603576773001211102367788879999999


No 108
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.17  E-value=7.1e-10  Score=82.79  Aligned_cols=231  Identities=24%  Similarity=0.339  Sum_probs=132.9

Q ss_pred             CCEEEEEEEEEECCCCEECHHH-HHHHH-CCC-----HHHHHH----CC-C-CCE--EEEECC----CCCHHHHHHHHHH
Q ss_conf             9226999999964984117889-99880-999-----878110----24-7-518--898289----8899999999999
Q gi|254780497|r    1 MIRSTVRGIGLSLPRRVLSNSD-LESIV-DTS-----DGWIKR----RV-G-ISR--RHIAGK----DETTASLGEAAAR   61 (324)
Q Consensus         1 M~~~~I~~~g~ylP~~~v~~~e-l~~~~-~~~-----~~~i~~----~~-G-I~~--R~~~~~----~e~~~~la~~Aa~   61 (324)
                      |.+|.|+|+|..-|--. +.++ |.... +.+     ..|-..    +. | |..  -++...    -+...-+++.|++
T Consensus         2 ~~rVviTG~g~vs~lG~-~~~~~~~~l~~g~sgi~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~r~~d~~~~~a~~Aa~   80 (412)
T COG0304           2 MRRVVITGLGIVSSLGN-GVEEVWAALLAGKSGIRPITRFDASGLGVKIAGEIKDLDDQIAKKERRFMDRFSQLAVVAAV   80 (412)
T ss_pred             CCEEEEECCEEECCCCC-CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHCCCHHHHHHHHHHH
T ss_conf             86299943456313658-87999999865878877666456557787503433520101366766141589999999999


Q ss_pred             HHHHHHCCCC-CCCC--E-EEEECCCCCC----------------------C----CCC-CCCCHHHHHHCCCCCCCCCC
Q ss_conf             9997402123-5443--3-6650122334----------------------5----898-53100112202686444421
Q gi|254780497|r   62 DALHHAEMSV-DDID--L-IIVATSTPDQ----------------------T----FPS-TAVNIQNRLGMKRGFAFDMQ  110 (324)
Q Consensus        62 ~al~~a~~~~-~~Id--~-ii~~s~~~~~----------------------~----~p~-~a~~i~~~LGl~~~~~~di~  110 (324)
                      +|++++|+++ .+.+  . ++.+|..+..                      .    .|+ .+..++..+|++ ...+.++
T Consensus        81 ~Al~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~g~~-G~~~t~~  159 (412)
T COG0304          81 EALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGLK-GPNYTPV  159 (412)
T ss_pred             HHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCC-CCCCCHH
T ss_conf             999975998433568627999931677841256678888752786676820566653514789999985877-8767806


Q ss_pred             CCCCCHHHHHHHHHHHHHHCCCCCCEEEEECC-CC---------------C------CCCCCCC-CCCCCCCCCCCEEEE
Q ss_conf             01220034678889989641556531676302-24---------------3------2224566-323234544312344
Q gi|254780497|r  111 AVCSGFVYAVTTADSYIRSGVVRRVMVIGSDT-FS---------------R------IVDWSDR-STCVLFGDGAGALIL  167 (324)
Q Consensus       111 ~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~-~S---------------~------~~d~~d~-~~~~lfGDGAaA~ll  167 (324)
                      .+|+++.+++..|..+|+.|..+.+++.++|. .+               +      ..++.|+ ...+++|.||+.+||
T Consensus       160 tACatg~~aIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~a~~Alst~nd~p~~asrPfd~~RdGFV~gEGag~lVL  239 (412)
T COG0304         160 TACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNRDGFVIGEGAGALVL  239 (412)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEE
T ss_conf             66776888999999999739999899846533158989999998787567889953358888888997788540457886


Q ss_pred             ECCCCCCCCCCC--CCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             026544654344--541012320355555617754876544433200103202444557777777888898740010001
Q gi|254780497|r  168 EGVEVKGSSMAD--TGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENI  245 (324)
Q Consensus       168 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~di  245 (324)
                      |..+........  ..+...-..+|.     ..+..     +.     .+|        ....+.++.+|+++|++++||
T Consensus       240 E~~ehA~aRGA~Iyaei~G~g~~~Da-----~h~t~-----P~-----p~g--------~Ga~~am~~AL~~Agl~~~~i  296 (412)
T COG0304         240 EELEHALARGAKIYAEIVGYGTTSDA-----YHITA-----PA-----PDG--------EGAIRAMRAALADAGLTPEDI  296 (412)
T ss_pred             CCHHHHHHCCCCEEEEEEEEEECCCC-----CCCCC-----CC-----CCC--------CHHHHHHHHHHHHCCCCHHHC
T ss_conf             37624866899658999877731440-----13678-----99-----787--------569999999999849997679


Q ss_pred             CCCCCCCCCHH
Q ss_conf             21024444415
Q gi|254780497|r  246 DWFVPHQANWR  256 (324)
Q Consensus       246 d~~~~Hq~~~~  256 (324)
                      ||+..|-.+-.
T Consensus       297 dYinaHgTsT~  307 (412)
T COG0304         297 DYINAHGTSTP  307 (412)
T ss_pred             CEEECCCCCCC
T ss_conf             98947876687


No 109
>pfam00109 ketoacyl-synt Beta-ketoacyl synthase, N-terminal domain. The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains most of the structures involved in dimer formation and also the active site cysteine.
Probab=99.08  E-value=9.2e-10  Score=82.06  Aligned_cols=167  Identities=22%  Similarity=0.325  Sum_probs=104.3

Q ss_pred             EEEEEEEEEECCCCEECHHHHHHHH--CCC------HHH--HH--HCCCCCEE-EEECCC------------CCHHHHHH
Q ss_conf             2699999996498411788999880--999------878--11--02475188-982898------------89999999
Q gi|254780497|r    3 RSTVRGIGLSLPRRVLSNSDLESIV--DTS------DGW--IK--RRVGISRR-HIAGKD------------ETTASLGE   57 (324)
Q Consensus         3 ~~~I~~~g~ylP~~~v~~~el~~~~--~~~------~~~--i~--~~~GI~~R-~~~~~~------------e~~~~la~   57 (324)
                      +|.|+|+|.-.|.-. +.|++-+.+  +.+      ..+  ..  .+.+-+-. +..++.            ....-+++
T Consensus         3 ~VvITG~G~vtp~G~-~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~d~~~~~~~   81 (243)
T pfam00109         3 PVAITGMGCRFPGGV-GPEEFWELLLAGRDAIREFPADLSGLYPPSRVAGEIYGFDFDAAFFGISPREAEAMDPQQRLAL   81 (243)
T ss_pred             CEEEECCEEECCCCC-CHHHHHHHHHCCCCEEEECCCHHHHCCCCCCCCEECCCCCCCHHHCCCCHHHHHHCCHHHHHHH
T ss_conf             999986688997989-9999999998599888746950644479876010146778781115989999985499999999


Q ss_pred             HHHHHHHHHHCCCCCCCC-----EEEEECCCCC--------------CC--------CCC-CCCCHHHHHHCCCCCCCCC
Q ss_conf             999999974021235443-----3665012233--------------45--------898-5310011220268644442
Q gi|254780497|r   58 AAARDALHHAEMSVDDID-----LIIVATSTPD--------------QT--------FPS-TAVNIQNRLGMKRGFAFDM  109 (324)
Q Consensus        58 ~Aa~~al~~a~~~~~~Id-----~ii~~s~~~~--------------~~--------~p~-~a~~i~~~LGl~~~~~~di  109 (324)
                      .|+++||+++|++++++.     -|+.++....              ..        .|+ .+.+|+..+|++ .+++.+
T Consensus        82 ~aa~~Al~dAGl~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g~~-Gp~~t~  160 (243)
T pfam00109        82 EAAWEALEDAGLDPASLRGSDRTGVFVGSGSGDYAELQALDSAGGPRRGSPYLTGAWMPSVAAGRISYRLGLR-GPSVTV  160 (243)
T ss_pred             HHHHHHHHHCCCCHHHCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCC-CCCCCC
T ss_conf             9999999984998467278872899998647648999976303674334641105645117888998674157-986466


Q ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC-CC----------CC-------CCCCC-CCCCCCCCCCCEEEEECC
Q ss_conf             1012200346788899896415565316763022-43----------22-------24566-323234544312344026
Q gi|254780497|r  110 QAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF-SR----------IV-------DWSDR-STCVLFGDGAGALILEGV  170 (324)
Q Consensus       110 ~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~-S~----------~~-------d~~d~-~~~~lfGDGAaA~ll~~~  170 (324)
                      +.+|++++.||..|..+|++|+.+.+|+.++|.. +.          .+       .+.|+ ...+++|+||+++||++.
T Consensus       161 ~~ACaSg~~AI~~A~~~I~~G~~d~~i~Gg~~~~~~~~~~~~f~~~~a~~~~~~~~rpfd~~~~G~v~GEGaa~lvLE~~  240 (243)
T pfam00109       161 DTACSSSLVALHAAVRSIRRGECDLALAGGVEAPLTPGGFAGFSAAGALLSPDGPCKAFDPFADGFVRGEGVGAVLLKEL  240 (243)
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEH
T ss_conf             55207899999999975336983879997841556978999999747857979998887899996553614998999767


Q ss_pred             C
Q ss_conf             5
Q gi|254780497|r  171 E  171 (324)
Q Consensus       171 ~  171 (324)
                      +
T Consensus       241 e  241 (243)
T pfam00109       241 S  241 (243)
T ss_pred             H
T ss_conf             6


No 110
>pfam00108 Thiolase_N Thiolase, N-terminal domain. Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase.
Probab=99.06  E-value=3.9e-10  Score=84.48  Aligned_cols=100  Identities=25%  Similarity=0.285  Sum_probs=86.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             89889999999999999974021235443366501223345898531001122026-86444421012200346788899
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADS  125 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~  125 (324)
                      -.+.++.+|+..+++.+|++++++|++||.||++.+.+....+..+..+.-..|++ .+.++.|+..|.|++.++..|..
T Consensus        21 l~~~~~~~L~~~~~~~~l~r~~~~p~~Id~vi~G~~~~~g~~~n~aR~~~l~aGlp~~vp~~tvnr~C~Sgl~Ai~~Aa~  100 (264)
T pfam00108        21 LKDLSAVDLGAIAIKAALERAGVKPEDVDEVIMGNVLQAGEGQNPARQAALKAGIPDSVPAVTINKVCGSGLKAVALAAQ  100 (264)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHH
T ss_conf             78898899999999999998599968835688843665677662999999976999888668982320179999999999


Q ss_pred             HHHHCCCCCCEEEEECCCCCC
Q ss_conf             896415565316763022432
Q gi|254780497|r  126 YIRSGVVRRVMVIGSDTFSRI  146 (324)
Q Consensus       126 li~~g~~~~~Lvv~~e~~S~~  146 (324)
                      .|++|..+.+|+.+.|.+|+.
T Consensus       101 ~I~~G~~dv~iagGvEsmS~~  121 (264)
T pfam00108       101 AIRAGDADIVVAGGVESMSNA  121 (264)
T ss_pred             HHHCCCCCEEEEECCCCCCCC
T ss_conf             983798766787221356545


No 111
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.04  E-value=1.1e-08  Score=75.10  Aligned_cols=232  Identities=23%  Similarity=0.319  Sum_probs=145.6

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf             99999999999997402123544336650122334589853100112202686444421012200346788899896415
Q gi|254780497|r   52 TASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGV  131 (324)
Q Consensus        52 ~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~  131 (324)
                      ...|-.+|++.+|+++++.++|||+++-+--.. +..+  ++..++.|+++   -|-+-++|+.+..+|.+|..++..|-
T Consensus        56 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLln-Q~i~--s~f~ar~l~IP---f~GlyGACST~~Esl~laa~~vdgg~  129 (336)
T PRK08304         56 ESKLMSDAIQQALQKANLKESDIDYLLAGDLLN-QTIS--ANFVARELGIP---FLGLYGACSTMMESLALASMLIDGGF  129 (336)
T ss_pred             HHHHHHHHHHHHHHHCCCCHHHCEEEEECHHHH-HHHH--HHHHHHHCCCC---EEEHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             999999999999997499977873897222455-4677--66779865998---01025677889999999999982663


Q ss_pred             CCCCEEEEECCCC---CCCC----C-CC-CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCC
Q ss_conf             5653167630224---3222----4-56-632323454431234402654465434454101232035555561775487
Q gi|254780497|r  132 VRRVMVIGSDTFS---RIVD----W-SD-RSTCVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGG  202 (324)
Q Consensus       132 ~~~~Lvv~~e~~S---~~~d----~-~d-~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (324)
                      .+++|..++.-++   |-++    | .+ |.++-..=-||+|+||++......      + ...  |-|+-.|     .+
T Consensus       130 A~~vla~tSSH~~tAErQFR~P~EyG~Qrp~tAqwTVTGaGa~il~~~~~~p~------I-t~~--TiGkVvD-----~G  195 (336)
T PRK08304        130 ADRVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAVLLSKEGSGPK------I-TYA--TIGKVID-----YG  195 (336)
T ss_pred             HHHHHEECCCCCHHHHHHCCCCHHCCCCCCCCCCEEEECEEEEEEECCCCCCE------E-EEE--EEEEEEE-----CC
T ss_conf             64531002334203665515803206779986517887517999813899977------9-898--6788876-----48


Q ss_pred             CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC---CCHHHHHHHHHHCCCCHHHHHH-----
Q ss_conf             65444332001032024445577777778888987400100012102444---4415899999971978767336-----
Q gi|254780497|r  203 PSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQ---ANWRIINSIVDKMKIPFDKVIV-----  274 (324)
Q Consensus       203 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq---~~~~~~~~~~~~lgl~~e~~~~-----  274 (324)
                      -...     +.| |    ..+.+...+.|.+.+++.|.+++|.|.++.--   .++.+.+.+.++-|++.+..+.     
T Consensus       196 i~D~-----~nM-G----aAMAPAA~dTI~~hf~Dtg~~p~dYDlIvTGDLg~vG~~i~~~Ll~e~g~~i~~~~~DCG~~  265 (336)
T PRK08304        196 IKDP-----LDM-G----AAMAPAAADTIKQHFEDTGRTPEDYDLIVTGDLGAVGREIAKELLKEEGYDISDNYNDCGVM  265 (336)
T ss_pred             CCCC-----CCC-H----HHHHHHHHHHHHHHHHHHCCCHHHCCEEEECCHHHHHHHHHHHHHHHCCCCHHHCCCCCCEE
T ss_conf             8884-----303-5----55537899999999998099900234899664588789999999998097855522756768


Q ss_pred             HHH----H--HCCC---HHHHHHHH-HHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf             586----5--1933---01269999-99999806889998999999714501
Q gi|254780497|r  275 TVD----I--HGNT---SAASIPLA-LAVAVKEGRVKKGDCLLLEAMGGGFT  316 (324)
Q Consensus       275 ~~~----~--~Gn~---~sas~~~~-L~~~~~~g~l~~Gd~vll~~~G~G~s  316 (324)
                      .++    +  -|-.   .||.++.. +-.-+++|++   .+||+++.|+=+|
T Consensus       266 iyd~e~Qdv~aGGSGcgCSAvV~~g~il~~m~~g~~---krvL~vaTGALlS  314 (336)
T PRK08304        266 IYDSEQQDVFAGGSGCACSAVVTYGYLYKELQKGKL---KRVLVVATGALLS  314 (336)
T ss_pred             EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC---CEEEEEECCHHCC
T ss_conf             763777765688765444789989998999864873---1799997403138


No 112
>pfam07451 SpoVAD Stage V sporulation protein AD (SpoVAD). This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation.
Probab=99.04  E-value=1.4e-08  Score=74.50  Aligned_cols=232  Identities=21%  Similarity=0.285  Sum_probs=145.4

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf             99999999999997402123544336650122334589853100112202686444421012200346788899896415
Q gi|254780497|r   52 TASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGV  131 (324)
Q Consensus        52 ~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~  131 (324)
                      ...|-.+|++.||+|++++++|||+++-+--. .+..+  ++..++.|+++   -|-+-++|+.+..+|.+|.-++..|-
T Consensus        51 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLl-nQ~i~--ssf~ar~l~iP---f~GlyGACST~~E~l~laa~~vd~g~  124 (329)
T pfam07451        51 ESKMLEEAVKLALKKAGLKKDDIDYLLAGDLL-NQIIS--SSFAARTLGIP---FLGLYGACSTMMESLALAAMLVDGGF  124 (329)
T ss_pred             HHHHHHHHHHHHHHHCCCCHHHCEEEEECHHH-HHHHH--HHHHHHHCCCC---EEEHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             99999999999998749998886489501244-32577--77889863998---12113566778999999999984665


Q ss_pred             CCCCEEEEECCCC---CCCC----C-CC-CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCC
Q ss_conf             5653167630224---3222----4-56-632323454431234402654465434454101232035555561775487
Q gi|254780497|r  132 VRRVMVIGSDTFS---RIVD----W-SD-RSTCVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGG  202 (324)
Q Consensus       132 ~~~~Lvv~~e~~S---~~~d----~-~d-~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (324)
                      .+++|..++.-++   |-++    | .+ |.++-+.=-||+|+||++......      + ...  |-|+-.|     .+
T Consensus       125 A~~vla~tSSH~~tAErQFR~P~EyG~QrpptAqWTVTGaGa~il~~~~~~p~------I-t~~--TiGkVvD-----~G  190 (329)
T pfam07451       125 ADYVLAATSSHFASAERQFRFPTEYGGQRPPTAQWTVTGAGAVLLGKEGDGPR------I-TSA--TIGKVVD-----YG  190 (329)
T ss_pred             HHHEEEEECCCCHHHHHHCCCCHHCCCCCCCCCCEEEECEEEEEEECCCCCCE------E-EEE--EEEEEEE-----CC
T ss_conf             43413431445203665426822116779986637887518999943899877------9-898--7788876-----58


Q ss_pred             CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC---CCHHHHHHHHHHCCCCHHHHHH-----
Q ss_conf             65444332001032024445577777778888987400100012102444---4415899999971978767336-----
Q gi|254780497|r  203 PSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQ---ANWRIINSIVDKMKIPFDKVIV-----  274 (324)
Q Consensus       203 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq---~~~~~~~~~~~~lgl~~e~~~~-----  274 (324)
                      -...     +.| |    ..+.+...+.|.+.+++.|.+++|.|.++.--   .++.+.+.+.++-|++.++.+.     
T Consensus       191 i~Dp-----~nM-G----aAMAPAA~dTI~~hf~D~g~~p~dYDlIvTGDLG~vG~~i~~~Ll~~~g~~i~~~~~DCG~~  260 (329)
T pfam07451       191 IKDP-----NNM-G----AAMAPAAADTIEQHFQDTGRDPSDYDLIVTGDLGKVGREIAEDLLKEKGYDISENYQDCGLL  260 (329)
T ss_pred             CCCC-----CCC-H----HHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCHHHHHHHHHHHHHHHCCCCHHHCCCCCCEE
T ss_conf             8884-----302-5----55647899999999997099922444799664488789999999998198844431766768


Q ss_pred             HHH----HH--CCCH---HHHHHHH-HHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf             586----51--9330---1269999-99999806889998999999714501
Q gi|254780497|r  275 TVD----IH--GNTS---AASIPLA-LAVAVKEGRVKKGDCLLLEAMGGGFT  316 (324)
Q Consensus       275 ~~~----~~--Gn~~---sas~~~~-L~~~~~~g~l~~Gd~vll~~~G~G~s  316 (324)
                      .++    +.  |-.|   ||.++.. |-.-+++|++   .+||+++.|+=+|
T Consensus       261 Iyd~~~Q~v~aGGSGcgCSAvV~~g~il~~m~~g~~---krvL~VaTGALlS  309 (329)
T pfam07451       261 IYDNEKQDVHAGGSGCGCSAVVLYGYLLKKMKKGEL---KRVLFVATGALLS  309 (329)
T ss_pred             EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC---EEEEEEECCHHCC
T ss_conf             664787765578764336899999998999965872---1899997503138


No 113
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases; InterPro: IPR002155   Two different types of thiolase , ,  are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis.   In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes.   There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction.   Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases ..
Probab=99.03  E-value=5.2e-10  Score=83.63  Aligned_cols=101  Identities=23%  Similarity=0.263  Sum_probs=85.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHH-CCCCCCCCEEEEECCCCCCCC-CCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHH
Q ss_conf             898899999999999999740-212354433665012233458-98531001122026-864444210122003467888
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHA-EMSVDDIDLIIVATSTPDQTF-PSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTA  123 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a-~~~~~~Id~ii~~s~~~~~~~-p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A  123 (324)
                      -++.++.||++.+.+++|+|+ +++|++||-||++++.+.--- ...+..++=.-|++ +.+++.|+..|+|++.|+..|
T Consensus        19 ~~~~~a~dL~~~~i~~ll~r~p~l~~~~iD~vi~G~V~~~g~~g~~~aR~aaL~AGl~~~vpa~tvnr~CaSGl~Av~~a   98 (447)
T TIGR01930        19 LKDLSAEDLGAAVIKELLERNPGLDPELIDDVILGNVLQAGEQGQNIARQAALAAGLPESVPALTVNRQCASGLQAVALA   98 (447)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHH
T ss_conf             57878799999999999985368884672817761000577644148999998706898787344202324279999999


Q ss_pred             HHHHHHCCCCCCEEEEECCCCCCC
Q ss_conf             998964155653167630224322
Q gi|254780497|r  124 DSYIRSGVVRRVMVIGSDTFSRIV  147 (324)
Q Consensus       124 ~~li~~g~~~~~Lvv~~e~~S~~~  147 (324)
                      ...|++|.+.-+|.-+.|.+|+.-
T Consensus        99 a~~I~~G~~d~~~AGGvEsMS~~P  122 (447)
T TIGR01930        99 AQKIRAGEADVVVAGGVESMSRVP  122 (447)
T ss_pred             HHHHHCCCCCEEEEECCCCCCCCC
T ss_conf             988534850167860745446675


No 114
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.01  E-value=2.3e-08  Score=73.20  Aligned_cols=265  Identities=21%  Similarity=0.171  Sum_probs=142.7

Q ss_pred             CEEEEEEEEEECCCCEECHHH-HHHHHCCC------HHHHHHC-C----CCC-EEEEECCC-----CCHHHHHHHHHHHH
Q ss_conf             226999999964984117889-99880999------8781102-4----751-88982898-----89999999999999
Q gi|254780497|r    2 IRSTVRGIGLSLPRRVLSNSD-LESIVDTS------DGWIKRR-V----GIS-RRHIAGKD-----ETTASLGEAAARDA   63 (324)
Q Consensus         2 ~~~~I~~~g~ylP~~~v~~~e-l~~~~~~~------~~~i~~~-~----GI~-~R~~~~~~-----e~~~~la~~Aa~~a   63 (324)
                      .+|.|+|+|..-|--. +.++ |.....-.      .+..... .    .+. ..++..+.     ....-|++.|+++|
T Consensus         6 rRVVITGiG~VsplG~-g~~~~w~aL~~G~~~~~~d~~~~~~~~~~~~~~~d~~~~~~~~~~~r~m~~~~~~a~~AA~~A   84 (397)
T PRK06519          6 NDVVITGIGLVSSLGE-GLDAHWAALAAARVQPNVDTETFAPYPVHPLPEIDWDLQIPKRGDQRQMEAWQRLGTYAAGLA   84 (397)
T ss_pred             CCEEEECHHHCCCCCC-CHHHHHHHHHCCCCCCCCCHHHCCCCCCEECCCCCHHHCCCCHHHHHCCCHHHHHHHHHHHHH
T ss_conf             9789908044068828-999999998779992542743258754216788883430565155532579999999999999


Q ss_pred             HHHHCCCCCC-----CCEEEEECCCC------------------C---C--------CCCC---------CCCCHHHHHH
Q ss_conf             9740212354-----43366501223------------------3---4--------5898---------5310011220
Q gi|254780497|r   64 LHHAEMSVDD-----IDLIIVATSTP------------------D---Q--------TFPS---------TAVNIQNRLG  100 (324)
Q Consensus        64 l~~a~~~~~~-----Id~ii~~s~~~------------------~---~--------~~p~---------~a~~i~~~LG  100 (324)
                      |+++|+++++     +++++ ++...                  +   +        ..|.         .+..|.-++|
T Consensus        85 l~dAGl~~~~~~~~~~gv~v-gsg~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~P~~~~~~l~n~~a~~isi~~g  163 (397)
T PRK06519         85 LDDAGIKGNEEICSTMDMIV-AAGGGERDIAVDTAILNEARKGNDRGGLLNERLMTELRPTLFLAQLSNLLAGNISIVHK  163 (397)
T ss_pred             HHHCCCCCCCCCCCCCCEEE-EECCCCCCEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf             99679998700104656799-95366653044222102444334562033321456678268898877628999999837


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCC----------------CCCC------CCCCCCCCCC
Q ss_conf             26864444210122003467888998964155653167630224----------------3222------4566323234
Q gi|254780497|r  101 MKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFS----------------RIVD------WSDRSTCVLF  158 (324)
Q Consensus       101 l~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S----------------~~~d------~~d~~~~~lf  158 (324)
                      ++ .+++.+.++|+++.+||..|.++|+.|..+.+|+.++|...                +..+      +.|| ..+.+
T Consensus       164 ~~-Gp~~tv~tACASg~~AIg~A~~~Ir~G~aDv~iaGGae~~~~p~~~~~~~~~~~~s~~~~~P~~a~~~~dR-~GfVl  241 (397)
T PRK06519        164 VT-GSSRTFMGEEGAGVSAIRIALARIASGQSTHALVGGAYNAERKDMLLLYELGGLLLKDGWAPVWSRKGSAG-GGFIL  241 (397)
T ss_pred             CC-CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC-CCEEE
T ss_conf             88-76654026038899999999999977998889986201333728999999733434799992224897567-97354


Q ss_pred             CCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             54431234402654465434454101232035555561775487654443320010320244455777777788889874
Q gi|254780497|r  159 GDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDST  238 (324)
Q Consensus       159 GDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~  238 (324)
                      |.||+.+|||..+.......  .+..... ..+..          ...+      .++         .....++.+|+++
T Consensus       242 GEGAa~LVLE~~ehA~aRGA--~IyaEi~-G~g~~----------~~~~------~~g---------~~~~~~~~al~~a  293 (397)
T PRK06519        242 GSGGAFLVLESREHAEARGA--RPYARLS-GVVSD----------RARR------SPG---------DVEASLERLWSAA  293 (397)
T ss_pred             CCCEEEEEECCHHHHHHCCC--EEEEEEE-EEECC----------CCCC------CCC---------HHHHHHHHHHHHC
T ss_conf             16638999735878985899--2689997-64058----------8899------980---------8999999999867


Q ss_pred             HCCCCCCCCCCCCCCCHHHHH-----HHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHH---HHHHHCCCCCC
Q ss_conf             001000121024444415899-----99997197876733658651933012699999---99998068899
Q gi|254780497|r  239 HLTIENIDWFVPHQANWRIIN-----SIVDKMKIPFDKVIVTVDIHGNTSAASIPLAL---AVAVKEGRVKK  302 (324)
Q Consensus       239 gl~~~did~~~~Hq~~~~~~~-----~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L---~~~~~~g~l~~  302 (324)
                      ++.++++.+ +.|..+..-.+     .+.+..++|   +-.+=.-+||+-.|+=-+.+   ..++++|.+.|
T Consensus       294 g~~~~~~~~-~~~~tgt~~~d~~e~~al~~~~~~p---VSStKsm~GH~lGAAGAiEav~~~Lal~~g~iPP  361 (397)
T PRK06519        294 GGLAAPTAV-ISGATGAHPATAEERAALEAHPGAP---VRGTGTLFGHLMEAQFPLGLALAALSVSRGALFP  361 (397)
T ss_pred             CCCCCCEEE-ECCCCCCCCCHHHHHHHHHHCCCCC---EECCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             999757489-8489888842799999986467996---7554476510078999999999999983197189


No 115
>PRK12404 stage V sporulation protein AD; Provisional
Probab=98.96  E-value=3.2e-08  Score=72.20  Aligned_cols=232  Identities=19%  Similarity=0.237  Sum_probs=143.7

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf             99999999999997402123544336650122334589853100112202686444421012200346788899896415
Q gi|254780497|r   52 TASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGV  131 (324)
Q Consensus        52 ~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~  131 (324)
                      ...|-.+|++.||+|+++.++|||+++-+--.. +..+  ++..++.|+++   -|-+-++|+.+..+|.+|.-++..|-
T Consensus        54 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLln-Q~i~--ssf~ar~l~iP---f~GlyGACST~~E~L~laa~~vd~g~  127 (334)
T PRK12404         54 HKKLFEEACSRATEKAKLRKDDIQFVLAGDLIN-QITP--TSFAARTLGTP---YLGLFGACSTSMEGLALGASIVNAKG  127 (334)
T ss_pred             HHHHHHHHHHHHHHHCCCCHHHCEEEEECHHHH-HHHH--HHHHHHHCCCC---EEEHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             999999999999987499978864896122443-2578--77889864998---01113566778999999999984665


Q ss_pred             CCCCEEEEECCCC---CCCC----C-CC-CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCC
Q ss_conf             5653167630224---3222----4-56-632323454431234402654465434454101232035555561775487
Q gi|254780497|r  132 VRRVMVIGSDTFS---RIVD----W-SD-RSTCVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGG  202 (324)
Q Consensus       132 ~~~~Lvv~~e~~S---~~~d----~-~d-~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (324)
                      .+++|..++.-++   |-++    | .+ |.++-+.=-||+|+||++......      + ...  |-|+-.|     .+
T Consensus       128 A~~vla~tSSH~~tAErQFR~P~EyG~QrpptAqWTVTGaGa~il~~~~~~p~------I-t~~--TiGkVvD-----~G  193 (334)
T PRK12404        128 AKYLLTGASSHNTAVEKQFRYPTEYGGQKPPTAQWTVTGAGAAILSKTGHGPR------V-TSA--TIGRVVD-----MG  193 (334)
T ss_pred             HHHEEEEECCCCHHHHHHCCCCHHCCCCCCCCCCEEEECEEEEEEECCCCCCE------E-EEE--EEEEEEE-----CC
T ss_conf             43502320445203665425822116779986627887618999943899977------9-898--7788876-----58


Q ss_pred             CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC---CCHHHHHHHHHHCCCC--HHHHHH---
Q ss_conf             65444332001032024445577777778888987400100012102444---4415899999971978--767336---
Q gi|254780497|r  203 PSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQ---ANWRIINSIVDKMKIP--FDKVIV---  274 (324)
Q Consensus       203 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq---~~~~~~~~~~~~lgl~--~e~~~~---  274 (324)
                      -...     +.| |    ....+...+.|.+.+++.|.+|+|.|.++.--   .++.+.+.+.++-|++  .++..+   
T Consensus       194 i~D~-----~nM-G----aAMAPAA~dTI~~hf~D~g~~p~dYDlI~TGDLG~vG~~i~~~Ll~~~g~~i~~~~~~DCG~  263 (334)
T PRK12404        194 LTDP-----FNM-G----GAMAPAAVDTIEAHLRDRQIDASYYDLIVTGDLGHVGREIAYDLLHKHGTKVTSEQFQDCGL  263 (334)
T ss_pred             CCCC-----CCC-H----HHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
T ss_conf             8884-----302-5----55547899999999997099923445799664388789999999998198887455376674


Q ss_pred             -HHHH-----HCCCH---HHHHHHH-HHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf             -5865-----19330---1269999-99999806889998999999714501
Q gi|254780497|r  275 -TVDI-----HGNTS---AASIPLA-LAVAVKEGRVKKGDCLLLEAMGGGFT  316 (324)
Q Consensus       275 -~~~~-----~Gn~~---sas~~~~-L~~~~~~g~l~~Gd~vll~~~G~G~s  316 (324)
                       .+++     -|-.|   ||.++.. +-.-+++|++   .+||+++.|+=+|
T Consensus       264 ~Iy~~~Q~v~aGGSGcgCSA~V~~g~il~~m~~g~~---krvL~VaTGALlS  312 (334)
T PRK12404        264 LIYREGQPVIAGASGPGCSATVVYGHLLNRMKRGEL---KKILVVATGALLS  312 (334)
T ss_pred             EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC---EEEEEEECCHHCC
T ss_conf             634689875688765336899999999999964873---0899997503138


No 116
>KOG1394 consensus
Probab=98.93  E-value=9.4e-09  Score=75.61  Aligned_cols=232  Identities=25%  Similarity=0.321  Sum_probs=136.7

Q ss_pred             CCEEEEEEEEEECCCCEECHHHHHHHHCCCHH----------HHHHC-CC-CCE----EEEECCCC----CHHHHHHHHH
Q ss_conf             92269999999649841178899988099987----------81102-47-518----89828988----9999999999
Q gi|254780497|r    1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDG----------WIKRR-VG-ISR----RHIAGKDE----TTASLGEAAA   60 (324)
Q Consensus         1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~----------~i~~~-~G-I~~----R~~~~~~e----~~~~la~~Aa   60 (324)
                      |.+|.|+|+|...|--.=...-|...+.-..+          .|..+ -| |.+    -+|...++    +..-+++.|+
T Consensus        23 ~rRVVITGmG~VTplG~~v~~~w~~Ll~GesGI~~l~~~d~k~~p~~v~g~Ip~f~~e~~~s~~~~r~ms~~~~~al~aa  102 (440)
T KOG1394          23 MRRVVITGMGAVTPLGNGVHTSWRNLLSGESGISSLEGPDYKSIPFTVAGKIPRFSVEDYVSKGDERRMSKFTKLALTAA  102 (440)
T ss_pred             CEEEEEECCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             30599955634202777757789876536667421466420247620113056633114436244666557899999999


Q ss_pred             HHHHHHHCCCCC---CCCE----EEEECCCC---------------------CCCCC----C-CCCCHHHHHHCCCCCCC
Q ss_conf             999974021235---4433----66501223---------------------34589----8-53100112202686444
Q gi|254780497|r   61 RDALHHAEMSVD---DIDL----IIVATSTP---------------------DQTFP----S-TAVNIQNRLGMKRGFAF  107 (324)
Q Consensus        61 ~~al~~a~~~~~---~Id~----ii~~s~~~---------------------~~~~p----~-~a~~i~~~LGl~~~~~~  107 (324)
                      ++||+++++.+.   +.|.    |..++.-.                     +|..|    + .+.+|.-++|+. .+..
T Consensus       103 ~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~~gl~-Gpnh  181 (440)
T KOG1394         103 EEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMKYGLR-GPNH  181 (440)
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHCCC-CCCH
T ss_conf             999973688886412455441045851463329999999999987223433863000665036510334531576-7761


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC---------------CC-CCC------CCCC-CCCCCCCCCCCE
Q ss_conf             421012200346788899896415565316763022---------------43-222------4566-323234544312
Q gi|254780497|r  108 DMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF---------------SR-IVD------WSDR-STCVLFGDGAGA  164 (324)
Q Consensus       108 di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~---------------S~-~~d------~~d~-~~~~lfGDGAaA  164 (324)
                      .++.+|+.+..++.-|..+|+.|..+..|.-++|.+               |. .-|      +.|. ...+.+|.||+.
T Consensus       182 svSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~RdGFVmGEGagv  261 (440)
T KOG1394         182 SVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKKRDGFVMGEGAGV  261 (440)
T ss_pred             HHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCEEE
T ss_conf             66766651430588888788707654552267530005222343788777641589931037888667773565066058


Q ss_pred             EEEECCCCCCCCCC--CCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             34402654465434--4541012320355555617754876544433200103202444557777777888898740010
Q gi|254780497|r  165 LILEGVEVKGSSMA--DTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTI  242 (324)
Q Consensus       165 ~ll~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~  242 (324)
                      +++|.-|.......  ..++++.-+.+|     ...+     +.+     ..||        ......++++|+++|++|
T Consensus       262 lvlEelEHA~~RgA~I~AE~lGygls~D-----a~Hi-----T~P-----~~dG--------~Ga~~am~raL~~Agl~p  318 (440)
T KOG1394         262 LVLEELEHAKKRGAPIYAEVLGYGLSSD-----AYHI-----TSP-----DPDG--------AGAVLAMERALKDAGLSP  318 (440)
T ss_pred             EEHHHHHHHHHCCCCEEHHHHCCCCCCC-----CCCC-----CCC-----CCCC--------CHHHHHHHHHHHHCCCCH
T ss_conf             7618678898749915277645752566-----3434-----789-----9873--------058999999998749995


Q ss_pred             CCCCCCCCCCCCHH
Q ss_conf             00121024444415
Q gi|254780497|r  243 ENIDWFVPHQANWR  256 (324)
Q Consensus       243 ~did~~~~Hq~~~~  256 (324)
                      +||||+--|..+-.
T Consensus       319 e~i~YvNAHATST~  332 (440)
T KOG1394         319 EDIDYVNAHATSTP  332 (440)
T ss_pred             HHCCEEECCCCCCC
T ss_conf             65570530333576


No 117
>KOG1390 consensus
Probab=98.80  E-value=3.1e-07  Score=65.98  Aligned_cols=269  Identities=22%  Similarity=0.234  Sum_probs=147.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             98899999999999999740212354433665012233458985310011220268-64444210122003467888998
Q gi|254780497|r   48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTADSY  126 (324)
Q Consensus        48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~~l  126 (324)
                      ...+..+|+.-|++.+|+|+.++|+|++-+|++...+-.+--..+.+.+=--|++. ..|..++-.|+|++-++.+|..-
T Consensus        26 ssl~A~~Lgsvaikaalera~~~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvNkvCaSgmKAv~laaQs  105 (396)
T KOG1390          26 SSLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVNKVCASGMKAVILAAQS  105 (396)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHH
T ss_conf             45762567789999999853798788455541030126667666777776269985214676236666568999999889


Q ss_pred             HHHCCCCCCEEEEECCCCCCCC-CCCCCCC---------CCCCCC-----------CCEEEE------ECCCCCC-----
Q ss_conf             9641556531676302243222-4566323---------234544-----------312344------0265446-----
Q gi|254780497|r  127 IRSGVVRRVMVIGSDTFSRIVD-WSDRSTC---------VLFGDG-----------AGALIL------EGVEVKG-----  174 (324)
Q Consensus       127 i~~g~~~~~Lvv~~e~~S~~~d-~~d~~~~---------~lfGDG-----------AaA~ll------~~~~~~~-----  174 (324)
                      |+.|....++..+.|.+|..-- +..|...         .+.-||           -+|=..      .|.++..     
T Consensus       106 I~~G~~divVaGGmEsMS~vP~~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~~~~MG~~aE~~ak~~~ItRe~QD~yAI~S  185 (396)
T KOG1390         106 IQTGHADIVVAGGMESMSNVPYLYVARGGVKYGGVQLVDGIVKDGLTDAYDKCHMGICAENTAKKYQITREEQDAYAIES  185 (396)
T ss_pred             HHCCCCCEEEECCCCHHCCCCCHHHHCCCCCCCCEEEEECHHHCCHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf             83387657986250200138523133157675880444301223467776067753058664777477676525688886


Q ss_pred             ---------CCCCCCCCEEEEEEC---------CC------------CCCCCEEECCCCCCCCCC--------CCHHHCC
Q ss_conf             ---------543445410123203---------55------------555617754876544433--------2001032
Q gi|254780497|r  175 ---------SSMADTGILSTYLCS---------DG------------SYIDKLYVDGGPSTSRTV--------GCIRMEG  216 (324)
Q Consensus       175 ---------~~~~~~~~~~~~~~~---------~~------------~~~~~~~~~~~~~~~~~~--------~~~~~~g  216 (324)
                               .....+++......+         |.            .....+..+++..+....        ..+-|.+
T Consensus       186 y~r~~~Aq~~g~f~~EIVPV~V~~~rg~~~v~~DEe~~k~~~~~~~~~l~~vF~~~ggTVTaaNAS~lnDGAAAvvL~s~  265 (396)
T KOG1390         186 YKRSENAQKAGKFDKEIVPVEVKTKRGETVVKKDEEPKKGSNIEKLSKLRPVFKEDGGTVTAANASTLNDGAAAVVLMSG  265 (396)
T ss_pred             HHHHHHHHHCCCCCCCEEEEEEECCCCCEEECCCHHHHCCCCHHHHCCCCCEEECCCCEECCCCCCCCCCCCEEEEEECH
T ss_conf             78778888607788724668983277757863440120132255530045336427975624534665766003677136


Q ss_pred             H-----------------------HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHH
Q ss_conf             0-----------------------24445577777778888987400100012102444441589999997197876733
Q gi|254780497|r  217 K-----------------------AVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVI  273 (324)
Q Consensus       217 ~-----------------------~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~  273 (324)
                      .                       ..|.-+   =...+..+|+++||+.+|||+|=++.+---..-...+.|+++|+++.
T Consensus       266 e~~~~~glkPLArIv~~~dAa~~P~df~ia---P~laipk~lk~aG~~~sdVd~~EiNEAFs~v~lA~iK~LgldP~kVN  342 (396)
T KOG1390         266 EAAKELGLKPLARIVAWGDAATEPIDFTIA---PALAIPKALKKAGLEQSDVDYWEINEAFSVVVLANIKKLGLDPSKVN  342 (396)
T ss_pred             HHHHHCCCCHHHHHHHHHHHCCCHHHCCCC---HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC
T ss_conf             458676982678775035412481430456---57777899987285666525876644666777777887378876636


Q ss_pred             HHH--HHHCC---CHHHHHHHHHHHHHHCCCCCCCCEEE-EEEECCCCCEEEEEEE
Q ss_conf             658--65193---30126999999999806889998999-9997145014568786
Q gi|254780497|r  274 VTV--DIHGN---TSAASIPLALAVAVKEGRVKKGDCLL-LEAMGGGFTSGTVLLR  323 (324)
Q Consensus       274 ~~~--~~~Gn---~~sas~~~~L~~~~~~g~l~~Gd~vl-l~~~G~G~s~~a~llr  323 (324)
                      .+-  --+||   ++.+.++..|.+.++.   +.|++.+ -+.-|.|-.. +++++
T Consensus       343 v~GGAValGHPlG~SGaRi~~tL~~~L~~---~~g~~GvAaiCnGGGgas-a~vie  394 (396)
T KOG1390         343 VHGGAVALGHPLGMSGARILVTLLHTLEQ---KGGKIGVAAICNGGGGAS-AMVIE  394 (396)
T ss_pred             CCCCEEECCCCCCCCCHHHHHHHHHHHHH---HCCCEEEEEEECCCCCEE-EEEEE
T ss_conf             77854533787677505399999999986---078503798851898500-48886


No 118
>KOG1389 consensus
Probab=98.80  E-value=1.3e-07  Score=68.32  Aligned_cols=272  Identities=19%  Similarity=0.244  Sum_probs=148.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHH-HCCCCCC-CCCCCCCCCHHHHHHHHH
Q ss_conf             89889999999999999974021235443366501223345898531001122-0268644-442101220034678889
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRL-GMKRGFA-FDMQAVCSGFVYAVTTAD  124 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~L-Gl~~~~~-~di~~~C~~~~~al~~A~  124 (324)
                      .++..+-+|-..+.+..+++.+++|++|+-|+++++.....- ...++++..+ |++-... .-++-.|+|++++.....
T Consensus        56 fkdt~pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~g-a~e~R~a~~~ag~P~tvpv~tvNRqCsSGLqaVadiA  134 (435)
T KOG1389          56 FKDTRPDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSG-ASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADIA  134 (435)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHHCCEEEEECCCCCCC-HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             555882899999999997651899789501355210377753-6898899997189865602566434214778999999


Q ss_pred             HHHHHCCCCCCEEEEECCCCCCC--CC-----------CCCCCCCC-CC---CC-CCEEEEECCCCCC------------
Q ss_conf             98964155653167630224322--24-----------56632323-45---44-3123440265446------------
Q gi|254780497|r  125 SYIRSGVVRRVMVIGSDTFSRIV--DW-----------SDRSTCVL-FG---DG-AGALILEGVEVKG------------  174 (324)
Q Consensus       125 ~li~~g~~~~~Lvv~~e~~S~~~--d~-----------~d~~~~~l-fG---DG-AaA~ll~~~~~~~------------  174 (324)
                      .-|++|.+.-.|-.+.|.++...  .|           .+...+++ +|   .- |.-.=++++++..            
T Consensus       135 ~~Ir~G~ydIGla~GvESMt~~~~~g~~g~~~~~~~~~~~A~dCllpmGitsEnva~rfgvsR~eqD~~Av~S~kkAa~A  214 (435)
T KOG1389         135 AKIRAGFYDIGLAAGVESMTTNYPRGWPGSINPRLQKFEKARDCLLPMGITSENVAERFGVSREEQDEAAVDSHKKAAAA  214 (435)
T ss_pred             HHHHCCCEEEECCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf             88744836630013511210367888866658424331577614432253157789872977656468888878999987


Q ss_pred             --CCCCCCCCEEE--EEECCCCCCC---CEEECCCCCCC-------CCCCCHHHCCHHH---------------------
Q ss_conf             --54344541012--3203555556---17754876544-------4332001032024---------------------
Q gi|254780497|r  175 --SSMADTGILST--YLCSDGSYID---KLYVDGGPSTS-------RTVGCIRMEGKAV---------------------  219 (324)
Q Consensus       175 --~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~-------~~~~~~~~~g~~~---------------------  219 (324)
                        ......+++..  .+ .|++..+   .+..+.+....       .....|++||-..                     
T Consensus       215 ~~~G~f~dEIiPv~tkv-~D~~g~~k~i~v~~DeGiRp~ttl~~l~klkpvFkkdGttTagNsSQvSDGa~aVLLmkRs~  293 (435)
T KOG1389         215 TAKGKFKDEIIPVKTKV-VDPKGDEKPITVSVDEGIRPNTTLESLAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSV  293 (435)
T ss_pred             HHCCCCHHHEEEEEEEC-CCCCCCCCCEEEECCCCCCCCCCHHHHHHCCHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHH
T ss_conf             64486323321100121-58867756626734788787765667763431422178203576311255535644436656


Q ss_pred             -----------H-HHHHHHH---------HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH---
Q ss_conf             -----------4-4557777---------777888898740010001210244444158999999719787673365---
Q gi|254780497|r  220 -----------F-KYAVEKA---------VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT---  275 (324)
Q Consensus       220 -----------~-~~~~~~~---------~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~---  275 (324)
                                 | .|....+         .-.|..+|+.+||..+|||+|=++.+-.+-.-...++|+|++||+..+   
T Consensus       294 A~qlgLPvlgvfr~f~~vGv~P~iMGiGPavAIp~alk~aGL~v~did~FEINEAFAsQ~~yc~~KL~ld~ekVN~~GGa  373 (435)
T KOG1389         294 AMQLGLPVLGVFRDFAAVGVPPAIMGIGPAVAIPKALKAAGLEVDDIDLFEINEAFASQALYCRNKLGLDPEKVNVNGGA  373 (435)
T ss_pred             HHHCCCCEEEEEEEEEEECCCHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCHHHCCCCCCE
T ss_conf             76549954677653244068889838772434288998749852235413233888888999998738988884888862


Q ss_pred             ---HHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEE
Q ss_conf             ---8651933012699999999980688999899999971450145687
Q gi|254780497|r  276 ---VDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFTSGTVL  321 (324)
Q Consensus       276 ---~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~a~l  321 (324)
                         -+-+|-+|+--+.--|+++-+++.-.... |+-+..|.|+-..++.
T Consensus       374 iAlGHPlGatGAR~VaTlL~emKrrgkd~~~G-VvSmCIGtGmGaAAvF  421 (435)
T KOG1389         374 IALGHPLGATGARCVATLLHEMKRRGKDCRFG-VVSMCIGTGMGAAAVF  421 (435)
T ss_pred             EECCCCCCCCCHHHHHHHHHHHHHHCCCCCCC-EEEEEECCCCCHHEEE
T ss_conf             33068757741759999999998633255555-6888524785322025


No 119
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=98.76  E-value=1e-06  Score=62.70  Aligned_cols=96  Identities=22%  Similarity=0.173  Sum_probs=72.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCC-CCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             98899999999999999740212-35443366501223345898531001122026864444210122003467888998
Q gi|254780497|r   48 KDETTASLGEAAARDALHHAEMS-VDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSY  126 (324)
Q Consensus        48 ~~e~~~~la~~Aa~~al~~a~~~-~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~l  126 (324)
                      +..++.+|..+|++.|++++|.+ .+.||.|.+.-...+ .++.....|+++||+.+...+--..|=.+--.-+..++.-
T Consensus        25 ~~~ePl~Lm~~A~~~A~~DaG~~l~~~IDsI~VVr~~sw-~y~np~~~lA~rLG~~pa~~~~t~~GGn~PQ~LVneaa~r  103 (502)
T PRK08257         25 RGLEPVDLMAAAARAAAADAGADLLEAIDSVAVVNQLSW-RYRNPPGLLAERLGADPARTVYGPVGGNSPQRLVNEAALR  103 (502)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHHCCEEEEECCCCC-CCCCHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHH
T ss_conf             147999999999999998608205875978985132256-4799899999973999775798369983689999999999


Q ss_pred             HHHCCCCCCEEEEECCCC
Q ss_conf             964155653167630224
Q gi|254780497|r  127 IRSGVVRRVMVIGSDTFS  144 (324)
Q Consensus       127 i~~g~~~~~Lvv~~e~~S  144 (324)
                      |+.|+.+-+||+++|..+
T Consensus       104 Ia~Ge~~~aLI~GgEA~~  121 (502)
T PRK08257        104 IARGEADVVLVAGAEAQS  121 (502)
T ss_pred             HHCCCCCEEEEECHHHHH
T ss_conf             976885479997440699


No 120
>KOG1202 consensus
Probab=98.70  E-value=4.5e-07  Score=64.93  Aligned_cols=295  Identities=20%  Similarity=0.266  Sum_probs=158.7

Q ss_pred             CEEEEEEEEEECCCCEECHHHHHHHH--C------CCHHHHHHCCCCCEEEEE---------------CC----CCCHHH
Q ss_conf             22699999996498411788999880--9------998781102475188982---------------89----889999
Q gi|254780497|r    2 IRSTVRGIGLSLPRRVLSNSDLESIV--D------TSDGWIKRRVGISRRHIA---------------GK----DETTAS   54 (324)
Q Consensus         2 ~~~~I~~~g~ylP~~~v~~~el~~~~--~------~~~~~i~~~~GI~~R~~~---------------~~----~e~~~~   54 (324)
                      -.+.|.|+.--+|+.- ..+||-.-+  |      -+--|-.-..|.-+|+=-               .+    =....-
T Consensus        11 ~divIsG~SGklPes~-ni~eF~~nLl~GvDmVtdd~rRW~~GlygLP~R~gKlKdL~kFDa~FF~Vh~KQA~~MDP~lR   89 (2376)
T KOG1202          11 EDIVISGMSGKLPESD-NVKEFGDNLLAGVDMVTDDPRRWEAGLYGLPKRSGKLKDLNKFDAGFFGVHPKQANTMDPQLR   89 (2376)
T ss_pred             CCEEEECCCCCCCCCC-CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHCCCCHHHHHCCCHHHH
T ss_conf             7689853567799864-189998764234312547743444532588244312334656311221277634310398999


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCE-----EEEECC--CCCCC--CC---------CC-CCCHHHHHHCC---CCCCCCCCCC
Q ss_conf             9999999999740212354433-----665012--23345--89---------85-31001122026---8644442101
Q gi|254780497|r   55 LGEAAARDALHHAEMSVDDIDL-----IIVATS--TPDQT--FP---------ST-AVNIQNRLGMK---RGFAFDMQAV  112 (324)
Q Consensus        55 la~~Aa~~al~~a~~~~~~Id~-----ii~~s~--~~~~~--~p---------~~-a~~i~~~LGl~---~~~~~di~~~  112 (324)
                      |-.++--+|+-++|++|.|+.-     -|-+|.  |...+  .|         ++ -+|.++++-.+   +.+.|.+..+
T Consensus        90 lLLE~t~EAivDaGiNP~dLRGsrTGV~vG~S~sETs~~l~~d~dtv~GY~ltGC~RaMfaNRiSytFDf~GPSfsvDTA  169 (2376)
T KOG1202          90 LLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGPSFSVDTA  169 (2376)
T ss_pred             HHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCEEEEEECCCCCEEEECH
T ss_conf             99998899998368886663764431799735543443224798600331014778998633405899536883455124


Q ss_pred             CCCHHHHHHHHHHHHHHCCCCCCEEEEECCCC-C-----CCC---CCCCCCCCC---------CCCCCCEEEEECCCCCC
Q ss_conf             22003467888998964155653167630224-3-----222---456632323---------45443123440265446
Q gi|254780497|r  113 CSGFVYAVTTADSYIRSGVVRRVMVIGSDTFS-R-----IVD---WSDRSTCVL---------FGDGAGALILEGVEVKG  174 (324)
Q Consensus       113 C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S-~-----~~d---~~d~~~~~l---------fGDGAaA~ll~~~~~~~  174 (324)
                      |+|.+.||+.|.+-|.+|++.+++|-++...- +     +.+   .++..++-.         =.||++|++|.+.....
T Consensus       170 CSSSL~ALq~A~~~ir~Gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avllqrk~~Ar  249 (2376)
T KOG1202         170 CSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVLLQRKSLAR  249 (2376)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEECCCHHHHHHHHCCCCCCCCCCCHHCCCCCEEECCCEEEEEEEHHHHHH
T ss_conf             56889999999999864688466410562575441456778743758898610010037823512756999874457787


Q ss_pred             CCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             54344541012320355555617754876544433200103202444557777777888898740010001210244444
Q gi|254780497|r  175 SSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQAN  254 (324)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~  254 (324)
                      +.  ...+++..+.+||-...-+..|              .|        +.-.++++++.+++|+.|+++-++=-|-.+
T Consensus       250 Rv--YAtilnartNTDGfKEqGvTfP--------------~G--------~~Q~qLi~e~Yse~Gl~P~sv~YvEAHGtG  305 (2376)
T KOG1202         250 RV--YATILNARTNTDGFKEQGVTFP--------------SG--------DMQEQLIRETYSEAGLNPESVVYVEAHGTG  305 (2376)
T ss_pred             HH--HHHHHCCCCCCCCHHHCCCCCC--------------CC--------HHHHHHHHHHHHHCCCCCCCEEEEEECCCC
T ss_conf             88--8875204557874221386578--------------80--------799999999998619892327999721677


Q ss_pred             HH---------HHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH---HC---------------------CCCC
Q ss_conf             15---------899999971978767336586519330126999999999---80---------------------6889
Q gi|254780497|r  255 WR---------IINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAV---KE---------------------GRVK  301 (324)
Q Consensus       255 ~~---------~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~---~~---------------------g~l~  301 (324)
                      .+         +.+.++..-. .+=.+-++-.+.||.-+||=..+|+..+   +.                     |+++
T Consensus       306 TkVGDpQEaN~it~~fC~~Rt-~pLLIGSvKSNMGHaEPASGv~alaKillsmE~glip~NLHy~tPNp~ip~L~dGrLk  384 (2376)
T KOG1202         306 TKVGDPQEANGITRFFCATRT-TPLLIGSVKSNMGHAEPASGVCALAKILLSMEEGLIPPNLHYNTPNPEIPALVDGRLK  384 (2376)
T ss_pred             CCCCCHHHHHHHHHHHHHCCC-CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCEEE
T ss_conf             877996787368898851588-7327652024579998640078999999988727578866568999876201056257


Q ss_pred             --------CCCEEEEEEECCCCCEEEEEE
Q ss_conf             --------998999999714501456878
Q gi|254780497|r  302 --------KGDCLLLEAMGGGFTSGTVLL  322 (324)
Q Consensus       302 --------~Gd~vll~~~G~G~s~~a~ll  322 (324)
                              +|..|-+-|||=|-+-.-+++
T Consensus       385 VVd~~lp~~GGivGiNSFGFGGsN~HviL  413 (2376)
T KOG1202         385 VVDRPLPWRGGIVGINSFGFGGSNAHVIL  413 (2376)
T ss_pred             EECCCCCCCCCEEEEECCCCCCCCEEEEE
T ss_conf             86578875686333413446887405995


No 121
>KOG1406 consensus
Probab=98.68  E-value=9e-09  Score=75.74  Aligned_cols=95  Identities=20%  Similarity=0.236  Sum_probs=76.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             98899999999999999740212354433665012233458985310011220268644442101220034678889989
Q gi|254780497|r   48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYI  127 (324)
Q Consensus        48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li  127 (324)
                      ++.+..||+.+|..++|+++++.-++|+.-+.+-..+|....   .+-.-++|++..+.|++++.|+.+.++|-+|..+|
T Consensus        25 ~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgdstcg---qraiyevgmtgipi~nvnnncatgssalflakqii  101 (408)
T KOG1406          25 ADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDSTCG---QRAIYEVGMTGIPIYNVNNNCATGSSALFLAKQII  101 (408)
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHEEEECCCCCC---HHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHH
T ss_conf             688670789999998888629977998766412452587530---67888704667624623675356704889999998


Q ss_pred             HHCCCCCCEEEEECCCCC
Q ss_conf             641556531676302243
Q gi|254780497|r  128 RSGVVRRVMVIGSDTFSR  145 (324)
Q Consensus       128 ~~g~~~~~Lvv~~e~~S~  145 (324)
                      ++|...-+|..+-|.+++
T Consensus       102 esgn~dcvlalgfekm~~  119 (408)
T KOG1406         102 ESGNSDCVLALGFEKMER  119 (408)
T ss_pred             HCCCCCEEEEECHHHCCC
T ss_conf             657753587613023077


No 122
>KOG1391 consensus
Probab=98.49  E-value=3.8e-06  Score=59.00  Aligned_cols=96  Identities=20%  Similarity=0.337  Sum_probs=79.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-----CCCCCCCCCCCCCHHHHHH
Q ss_conf             89889999999999999974021235443366501223345898531001122026-----8644442101220034678
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-----RGFAFDMQAVCSGFVYAVT  121 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-----~~~~~di~~~C~~~~~al~  121 (324)
                      -++.+..||..-|++.+|+.+++.++.+|.||++...   ...+.+.++.+..|++     ...++.|+--|-|+.+++-
T Consensus        23 LKg~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~---aSSsDgIYl~RHvGL~~GvP~e~pALtiNRLCGSGFQsiV   99 (396)
T KOG1391          23 LKGLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVL---ASSSDGIYLARHVGLRVGVPKETPALTINRLCGSGFQSIV   99 (396)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEEE---ECCCCCEEEEECCCCCCCCCCCCCCEEEHHHHCCCHHHHH
T ss_conf             1575444678899998886438883233258871134---1257726754003532278676673343013131279898


Q ss_pred             HHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf             889989641556531676302243
Q gi|254780497|r  122 TADSYIRSGVVRRVMVIGSDTFSR  145 (324)
Q Consensus       122 ~A~~li~~g~~~~~Lvv~~e~~S~  145 (324)
                      .++.-|.-|..+-+|.-+.|.+|.
T Consensus       100 NgaQ~I~vgea~ivL~GGtEnMSq  123 (396)
T KOG1391         100 NGAQEICVGEAEIVLCGGTENMSQ  123 (396)
T ss_pred             HHHHHHHCCCCEEEEECCCCCCCC
T ss_conf             667776307615998447452345


No 123
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=98.39  E-value=5.9e-07  Score=64.15  Aligned_cols=99  Identities=21%  Similarity=0.220  Sum_probs=77.6

Q ss_pred             CCCHHHHHHHHHHHHHHHH--CCCCCCCCEEEEECCCCCC-CCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHH
Q ss_conf             8899999999999999740--2123544336650122334-58985310011220268-644442101220034678889
Q gi|254780497|r   49 DETTASLGEAAARDALHHA--EMSVDDIDLIIVATSTPDQ-TFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTAD  124 (324)
Q Consensus        49 ~e~~~~la~~Aa~~al~~a--~~~~~~Id~ii~~s~~~~~-~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~  124 (324)
                      +....++.....+..+++.  ++++.+||-+++++..+.. ..+..+..++..+|++. .+++.++.+|+|++.++..|.
T Consensus        24 ~l~~e~l~~a~~~a~~~~~~~~vd~~~v~~vi~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~~~c~SG~~Av~~A~  103 (392)
T COG0183          24 ELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAA  103 (392)
T ss_pred             HCCHHHHHHHHHHHHHHHCCCCCCHHHHHHEEECCCCCHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHH
T ss_conf             62799999999997644222049855410214401341100335388999998599989870899645711999999999


Q ss_pred             HHHHHCCCCCCEEEEECCCCCCC
Q ss_conf             98964155653167630224322
Q gi|254780497|r  125 SYIRSGVVRRVMVIGSDTFSRIV  147 (324)
Q Consensus       125 ~li~~g~~~~~Lvv~~e~~S~~~  147 (324)
                      ..|++|..+.+|+++.|.+|+..
T Consensus       104 ~~I~sG~~dvvlagG~E~mS~~~  126 (392)
T COG0183         104 QAIASGEADVVLAGGVEKMSDAP  126 (392)
T ss_pred             HHHHCCCCCEEEEEEECCCCCCC
T ss_conf             99977998889998561145687


No 124
>pfam08540 HMG_CoA_synt_C Hydroxymethylglutaryl-coenzyme A synthase C terminal.
Probab=98.31  E-value=1.3e-05  Score=55.61  Aligned_cols=110  Identities=15%  Similarity=0.275  Sum_probs=67.1

Q ss_pred             HHCCHHHHHHHHHHHHHHHHHHHHH---------HHCCCCCCCCCCCCCCCHHHHHHHHHHC------------------
Q ss_conf             1032024445577777778888987---------4001000121024444415899999971------------------
Q gi|254780497|r  213 RMEGKAVFKYAVEKAVELIEKVFDS---------THLTIENIDWFVPHQANWRIINSIVDKM------------------  265 (324)
Q Consensus       213 ~~~g~~~~~~~~~~~~~~i~~~L~~---------~gl~~~did~~~~Hq~~~~~~~~~~~~l------------------  265 (324)
                      ..||+..-+.+++.+........++         .+...+++|++++|.|--++.+.-..+|                  
T Consensus        29 ~VDGk~Si~cYl~ALd~cy~~Y~~K~~~~~~~~~~~~~ld~fd~~~FH~Py~KlvqKs~arl~~nD~~~~~~~~~~~~~~  108 (282)
T pfam08540        29 VVDGKLSLQCYLKALDSCYKNYCKKIEKQTKDGGTKFGLDDFDYVIFHSPYCKLVQKSLARLLYNDFLRNPSSDKGNGVY  108 (282)
T ss_pred             EECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCH
T ss_conf             44728899999999999999999998730023677663766778998575448999999999987653065520110001


Q ss_pred             -------CCCHH----------------------HH---HHHHHHHCCCHHHHHHHHHHHHHHCCCC--CCCCEEEEEEE
Q ss_conf             -------97876----------------------73---3658651933012699999999980688--99989999997
Q gi|254780497|r  266 -------KIPFD----------------------KV---IVTVDIHGNTSAASIPLALAVAVKEGRV--KKGDCLLLEAM  311 (324)
Q Consensus       266 -------gl~~e----------------------~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~l--~~Gd~vll~~~  311 (324)
                             +++.|                      |+   ...-.++||++++|++++|..++.+...  -.|++|.|.||
T Consensus       109 ~~l~~~~~~~~e~s~~dk~~ek~~~~~sk~~f~~kv~psl~~~~~vGNmYTaSlY~~L~SLL~~~~~~~L~GkRIg~FSY  188 (282)
T pfam08540       109 EKLEALGGLKLEDSYTDRDLEKAFMQLSKPLFKKKTKPSLLLPTQVGNMYTASLYAALASLLSHVSADELAGKRIGMFSY  188 (282)
T ss_pred             HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC
T ss_conf             11100014644540100689999998708989863261878878607500699999999998437752348998999851


Q ss_pred             CCCCCEEEEEE
Q ss_conf             14501456878
Q gi|254780497|r  312 GGGFTSGTVLL  322 (324)
Q Consensus       312 G~G~s~~a~ll  322 (324)
                      |+|+..+.--+
T Consensus       189 GSGlaas~FS~  199 (282)
T pfam08540       189 GSGLAASLFSL  199 (282)
T ss_pred             CCCCCEEEEEE
T ss_conf             66611246758


No 125
>KOG1392 consensus
Probab=98.27  E-value=1.6e-06  Score=61.35  Aligned_cols=107  Identities=20%  Similarity=0.253  Sum_probs=80.9

Q ss_pred             CCCEEEEEC----CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCC
Q ss_conf             751889828----98899999999999999740212354433665012233458985310011220268-6444421012
Q gi|254780497|r   39 GISRRHIAG----KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVC  113 (324)
Q Consensus        39 GI~~R~~~~----~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C  113 (324)
                      |+++-++..    ++.-+-||+.+|.+.+|++..++.+.||+|||+|...+.-....|..-+-.-|.++ .++-.+..+|
T Consensus        49 gvrtpfl~sgt~ykdlmphdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktpahtvtmac  128 (465)
T KOG1392          49 GVRTPFLVSGTVYKDLMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTPAHTVTMAC  128 (465)
T ss_pred             CCCCCEEECCCCHHHHCHHHHHHHHHHHHHHHCCCCHHHHCEEEEHHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEEH
T ss_conf             36575365262055306058899999999875259888833453034577775012888999865898888641565210


Q ss_pred             CCHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf             20034678889989641556531676302243
Q gi|254780497|r  114 SGFVYAVTTADSYIRSGVVRRVMVIGSDTFSR  145 (324)
Q Consensus       114 ~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~  145 (324)
                      .+.-.|+-....+|++|.++.++.-+.|.+|.
T Consensus       129 issn~amttgmgliatg~~dvivaggvelmsd  160 (465)
T KOG1392         129 ISSNVAMTTGMGLIATGNADVIVAGGVELMSD  160 (465)
T ss_pred             HCCCHHHHCCCEEEEECCCCEEEECCEEECCC
T ss_conf             10351433062057507767798756554026


No 126
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA; InterPro: IPR004432   Members of this entry represent PfaA, which is involved in omega-3 polyunsaturated fatty acid biosynthesis, for example PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is found together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologues of PfaA, also included in this entry, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis; an alternative to the more familiar iterated mechanism of chain extension and desaturation, and like PfaA the more distant homologues are likewise found near genes for homologues of PfaB, PfaC, and/or PfaD..
Probab=96.63  E-value=0.003  Score=40.51  Aligned_cols=187  Identities=19%  Similarity=0.314  Sum_probs=105.4

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCEEE------EECCCCCCCCCC-----CCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             999999999974021235443366------501223345898-----531001122026864444210122003467888
Q gi|254780497|r   55 LGEAAARDALHHAEMSVDDIDLII------VATSTPDQTFPS-----TAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTA  123 (324)
Q Consensus        55 la~~Aa~~al~~a~~~~~~Id~ii------~~s~~~~~~~p~-----~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A  123 (324)
                      |-.=..+|.|+.+|++-+|=.+||      |.+ +-++-.|+     ++++|++++.+...-|. +..+|+|.+.||++|
T Consensus       141 LQyPVL~KV~K~SG~~d~D~~~lI~KF~~~Yi~-WEENSFPG~LGNVIsGRIANRFDlGG~NCV-VDAACAGSLAA~~~A  218 (2773)
T TIGR02813       141 LQYPVLKKVFKASGVEDEDSEMLIKKFQDQYIH-WEENSFPGSLGNVISGRIANRFDLGGMNCV-VDAACAGSLAALRLA  218 (2773)
T ss_pred             CCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCHHHCCHHHHHCCCCCCHH-HHHHHHHHHHHHHHH
T ss_conf             033368888741588764689999987621344-414578976433010101100015884256-666436679999999


Q ss_pred             HHHHHHCCCCCCEE---EEECC-------CCC--------CCCCCCCCC-CCCCCCCCCEEEEECCCCCCCCCCC--CCC
Q ss_conf             99896415565316---76302-------243--------222456632-3234544312344026544654344--541
Q gi|254780497|r  124 DSYIRSGVVRRVMV---IGSDT-------FSR--------IVDWSDRST-CVLFGDGAGALILEGVEVKGSSMAD--TGI  182 (324)
Q Consensus       124 ~~li~~g~~~~~Lv---v~~e~-------~S~--------~~d~~d~~~-~~lfGDGAaA~ll~~~~~~~~~~~~--~~~  182 (324)
                      -+-+-.|+. -++|   ||+|+       ||+        -+.+.|.++ .++.|.|-+=+-|-|-+...+..-.  .-+
T Consensus       219 ls~L~E~RS-e~MI~GGVC~DNSP~MYMSFSKTPAFTT~E~I~PFD~DSKGMMIGEGIGM~AlKRLeDAERDGD~iYaV~  297 (2773)
T TIGR02813       219 LSELLEGRS-EMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQPFDIDSKGMMIGEGIGMVALKRLEDAERDGDRIYAVI  297 (2773)
T ss_pred             HHHHCCCCC-CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf             986302532-1456275324888730202367876567885343314567544316555565332110105887789987


Q ss_pred             EEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             01232035555561775487654443320010320244455777777788889874001000121024444415899999
Q gi|254780497|r  183 LSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIV  262 (324)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~  262 (324)
                      .+.=..+||+|.. +|.            -|.+|          -.+.++++.+++|..|.-+..+=-|=.+-. -=-++
T Consensus       298 KGvGaSSDGkFKS-IYA------------PRP~G----------QAKAL~RAYdDAGF~P~~~GliEAHGTGT~-AGD~A  353 (2773)
T TIGR02813       298 KGVGASSDGKFKS-IYA------------PRPEG----------QAKALKRAYDDAGFAPHTVGLIEAHGTGTA-AGDVA  353 (2773)
T ss_pred             ECCCCCCCCCEEE-EEC------------CCCCH----------HHHHHHHHHHHCCCCCCCEEEEECCCCCCC-CCCCH
T ss_conf             3101376873223-217------------89844----------689987546432799751100621677764-12202


Q ss_pred             HHCCCC
Q ss_conf             971978
Q gi|254780497|r  263 DKMKIP  268 (324)
Q Consensus       263 ~~lgl~  268 (324)
                      |--||.
T Consensus       354 EF~GL~  359 (2773)
T TIGR02813       354 EFSGLV  359 (2773)
T ss_pred             HHCCCC
T ss_conf             331430


No 127
>pfam00195 Chal_sti_synt_N Chalcone and stilbene synthases, N-terminal domain. The C-terminal domain of Chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in this N-terminal domain.
Probab=96.58  E-value=0.015  Score=36.09  Aligned_cols=88  Identities=14%  Similarity=-0.002  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC----CCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf             45577777778888987400100012102444----44158999999719787673365865193301269999999998
Q gi|254780497|r  221 KYAVEKAVELIEKVFDSTHLTIENIDWFVPHQ----ANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVK  296 (324)
Q Consensus       221 ~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq----~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~  296 (324)
                      +.+++...+..+++|++.|+.++||+++++-.    ..+.+--.++++|||+++--...+.-.|.-+... -+..+..+-
T Consensus       100 ~~a~~La~~Aa~~AL~~aG~~~~dIthlv~vt~TG~~~Pg~d~~l~~~LGL~~~v~R~~i~~~GC~gg~~-gL~~A~~~~  178 (228)
T pfam00195       100 VEVPKLGKEAALKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRVMLYQQGCFAGGT-VLRLAKDLA  178 (228)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCHHEEEECCCCHHHHH-HHHHHHHHH
T ss_conf             9999999999999999958898899999999479998874789999982989872111411454164899-999999999


Q ss_pred             CCCCCCCCEEEEEEE
Q ss_conf             068899989999997
Q gi|254780497|r  297 EGRVKKGDCLLLEAM  311 (324)
Q Consensus       297 ~g~l~~Gd~vll~~~  311 (324)
                        +-+|+.+||+++.
T Consensus       179 --~~~p~~~VLvv~~  191 (228)
T pfam00195       179 --ENNKGARVLVVCS  191 (228)
T ss_pred             --HHCCCCEEEEEEE
T ss_conf             --8299987999982


No 128
>pfam02803 Thiolase_C Thiolase, C-terminal domain. Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase.
Probab=96.29  E-value=0.021  Score=35.07  Aligned_cols=93  Identities=24%  Similarity=0.268  Sum_probs=58.7

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH--HHHCCCHHH---HHHHHHHHHHHCCCCC
Q ss_conf             77778888987400100012102444441589999997197876733658--651933012---6999999999806889
Q gi|254780497|r  227 AVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTV--DIHGNTSAA---SIPLALAVAVKEGRVK  301 (324)
Q Consensus       227 ~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~--~~~Gn~~sa---s~~~~L~~~~~~g~l~  301 (324)
                      -...++++|+++|++++|||+|=+|-+--...-...+.|++++||+...-  =-+||=..+   -+...|.+.++.   +
T Consensus        24 p~~A~~~lL~r~gl~~~Did~~EinEAFA~~~l~~~~~l~id~ekvN~~GGaiAlGHP~GaSGarlv~~l~~~L~~---~  100 (123)
T pfam02803        24 PAYAIPKALKKAGLTVNDIDLFEINEAFAAQALAVAKDLGIDPEKVNVNGGAIALGHPLGASGARILVTLLHELKR---R  100 (123)
T ss_pred             HHHHHHHHHHHCCCCHHHCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHH---H
T ss_conf             9999999999829985546645641456777899999719892014898873442788466248999999999998---3


Q ss_pred             CCCEEEE-EEECCCCCEEEEEEE
Q ss_conf             9989999-997145014568786
Q gi|254780497|r  302 KGDCLLL-EAMGGGFTSGTVLLR  323 (324)
Q Consensus       302 ~Gd~vll-~~~G~G~s~~a~llr  323 (324)
                      .+.+.+. ...|.|.- .+++++
T Consensus       101 ~~~~G~as~C~gGG~g-~A~llE  122 (123)
T pfam02803       101 GGKYGLATLCIGGGQG-VAMIIE  122 (123)
T ss_pred             CCCEEEEEEECCCCEE-EEEEEE
T ss_conf             9999999970355608-899997


No 129
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=96.20  E-value=0.028  Score=34.30  Aligned_cols=11  Identities=0%  Similarity=0.063  Sum_probs=4.1

Q ss_pred             HHHHHHHCCCC
Q ss_conf             99997402123
Q gi|254780497|r   61 RDALHHAEMSV   71 (324)
Q Consensus        61 ~~al~~a~~~~   71 (324)
                      ++..+++||+-
T Consensus        42 ~~i~~~tgI~~   52 (361)
T cd00831          42 KRLCAKTGIET   52 (361)
T ss_pred             HHHHHCCCCCE
T ss_conf             99997269861


No 130
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases; InterPro: IPR002155   Two different types of thiolase , ,  are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis.   In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes.   There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction.   Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases ..
Probab=96.19  E-value=0.0031  Score=40.39  Aligned_cols=79  Identities=25%  Similarity=0.279  Sum_probs=52.6

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCC---------------C--CHHHHHHHHH--HHCC---CHHH
Q ss_conf             777888898740010001210244444158999999719---------------7--8767336586--5193---3012
Q gi|254780497|r  228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMK---------------I--PFDKVIVTVD--IHGN---TSAA  285 (324)
Q Consensus       228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lg---------------l--~~e~~~~~~~--~~Gn---~~sa  285 (324)
                      ...++++|+++||+.+|||+|=+|-+-....-...+.|+               +  +.+|+-.+=-  =+||   .+.|
T Consensus       331 ~~A~~~aL~kaGL~~~diDl~E~NEAFAaqvL~~~~~L~~~~~~~~~LG~~~a~~~~~~~k~NvnGGAIAlGHPlGasGA  410 (447)
T TIGR01930       331 VPAIPKALKKAGLSISDIDLFEINEAFAAQVLASIKELGLDDYIRQALGRDTALLDIDLEKVNVNGGAIALGHPLGASGA  410 (447)
T ss_pred             HHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEECCCCCCCCCCCCCHHHCCCCCCCHHH
T ss_conf             88999999984987335031013678999999999971784688863041110025861241766532111630023188


Q ss_pred             HHHHHHHHHHHCCCCCCCCEEE
Q ss_conf             6999999999806889998999
Q gi|254780497|r  286 SIPLALAVAVKEGRVKKGDCLL  307 (324)
Q Consensus       286 s~~~~L~~~~~~g~l~~Gd~vl  307 (324)
                      =+.+.|-+.|++.+ +.+.+.+
T Consensus       411 Ri~~tL~~~L~~~~-~g~~~G~  431 (447)
T TIGR01930       411 RIVTTLLHELKRRK-KGKRYGL  431 (447)
T ss_pred             HHHHHHHHHHHHCC-CCCCHHH
T ss_conf             99999999998514-8953016


No 131
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=95.50  E-value=0.016  Score=35.85  Aligned_cols=17  Identities=12%  Similarity=0.331  Sum_probs=9.8

Q ss_pred             HHHHHHHHHHHCCCCCC
Q ss_conf             77888898740010001
Q gi|254780497|r  229 ELIEKVFDSTHLTIENI  245 (324)
Q Consensus       229 ~~i~~~L~~~gl~~~di  245 (324)
                      .+++.+.++.|+.++.+
T Consensus       259 ~~~~~v~~~lgl~~ek~  275 (327)
T PRK05963        259 RIVDKVCETLGIPRAKA  275 (327)
T ss_pred             HHHHHHHHHCCCCHHHH
T ss_conf             99999999829797870


No 132
>TIGR02845 spore_V_AD stage V sporulation protein AD; InterPro: IPR010894   This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation ..
Probab=95.33  E-value=0.04  Score=33.30  Aligned_cols=66  Identities=18%  Similarity=0.398  Sum_probs=39.4

Q ss_pred             HHHHHHHHHHHHHHHCCCC--CCCCCCCCCCCHHHH------HHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf             7777778888987400100--012102444441589------99999719787673365865193301269999999998
Q gi|254780497|r  225 EKAVELIEKVFDSTHLTIE--NIDWFVPHQANWRII------NSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVK  296 (324)
Q Consensus       225 ~~~~~~i~~~L~~~gl~~~--did~~~~Hq~~~~~~------~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~  296 (324)
                      +.+.++|+.+|+|++++.+  |||+|+-    ...+      ..+++.|+||   +   +--||=|++..==|+|.-.+-
T Consensus        52 ~lm~~Av~~aL~Ka~l~~~PP~vD~~LA----GDLLNQ~~~anFvAR~L~iP---f---lGLygACsTs~E~L~~gA~lv  121 (331)
T TIGR02845        52 KLMEDAVNLALKKANLKKDPPDVDFFLA----GDLLNQIITANFVARELGIP---F---LGLYGACSTSMETLALGAMLV  121 (331)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCEEEEEH----HHHHHHHHHHHHHHHHCCCC---C---EECCCHHHHHHHHHHHHHHHH
T ss_conf             9999999998753587127872111201----03666789998988745888---2---340213578999999999998


Q ss_pred             CCCC
Q ss_conf             0688
Q gi|254780497|r  297 EGRV  300 (324)
Q Consensus       297 ~g~l  300 (324)
                      +|-+
T Consensus       122 ~GGf  125 (331)
T TIGR02845       122 DGGF  125 (331)
T ss_pred             HCCC
T ss_conf             3200


No 133
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=95.31  E-value=0.046  Score=32.96  Aligned_cols=14  Identities=21%  Similarity=0.451  Sum_probs=5.5

Q ss_pred             HHHHHHHHHCCCCC
Q ss_conf             88889874001000
Q gi|254780497|r  231 IEKVFDSTHLTIEN  244 (324)
Q Consensus       231 i~~~L~~~gl~~~d  244 (324)
                      ++.+.++.++.++.
T Consensus       259 ~~~i~~~Lgl~~~k  272 (326)
T PRK12879        259 IESLCEKLGIPLEK  272 (326)
T ss_pred             HHHHHHHCCCCHHH
T ss_conf             99999980979888


No 134
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=95.31  E-value=0.15  Score=29.73  Aligned_cols=93  Identities=13%  Similarity=0.131  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH--HHHHH--HHHHCCCH---HHHHHHHHHHHHHCCC
Q ss_conf             77778888987400100012102444441589999997197876--73365--86519330---1269999999998068
Q gi|254780497|r  227 AVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD--KVIVT--VDIHGNTS---AASIPLALAVAVKEGR  299 (324)
Q Consensus       227 ~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e--~~~~~--~~~~Gn~~---sas~~~~L~~~~~~g~  299 (324)
                      -...++++|+++|++++|||.|=+|-+--...-...+.||++.|  |+..+  -=-+||=.   .+-+...|-+.++.  
T Consensus       298 p~~A~~k~L~~agl~~~Did~~EinEAFA~q~l~~~~~lg~~~d~~kvN~~GGaiAlGHP~GAsGarl~~~l~~~L~~--  375 (400)
T PRK13359        298 PAPATQKLLARLGMTLDQFDVIELNEAFASQGLAVLRMLGVADDDARVNPNGGAIALGHPLGASGARLVTTALYQLHR--  375 (400)
T ss_pred             HHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH--
T ss_conf             999999999976998456877786046688899999981999877748988668874888022479999999999998--


Q ss_pred             CCCCCEEEEE-EECCCCCEEEEEEE
Q ss_conf             8999899999-97145014568786
Q gi|254780497|r  300 VKKGDCLLLE-AMGGGFTSGTVLLR  323 (324)
Q Consensus       300 l~~Gd~vll~-~~G~G~s~~a~llr  323 (324)
                       +.|.+.+.. ..|.|.-. +++++
T Consensus       376 -~~~~~Gl~t~c~ggG~G~-A~~iE  398 (400)
T PRK13359        376 -TGGRFALCTMCIGVGQGI-AIAIE  398 (400)
T ss_pred             -HCCCEEEEEECCCCCHHH-EEEEE
T ss_conf             -099989999622013323-69898


No 135
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=95.29  E-value=0.017  Score=35.74  Aligned_cols=16  Identities=6%  Similarity=0.268  Sum_probs=8.4

Q ss_pred             HHHHHHHHCCCCHHHH
Q ss_conf             8999999719787673
Q gi|254780497|r  257 IINSIVDKMKIPFDKV  272 (324)
Q Consensus       257 ~~~~~~~~lgl~~e~~  272 (324)
                      .++.+.++.|+.++.+
T Consensus       245 ~~~~~L~~~gl~~~dI  260 (339)
T PRK09258        245 TWEAFLQQLGWSVEQV  260 (339)
T ss_pred             HHHHHHHHCCCCHHHC
T ss_conf             9999999839998998


No 136
>pfam08392 FAE1_CUT1_RppA FAE1/Type III polyketide synthase-like protein. The members of this family are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region featured in this family contains the active site residues, as well as motifs involved in substrate binding.
Probab=95.24  E-value=0.07  Score=31.78  Aligned_cols=34  Identities=24%  Similarity=0.451  Sum_probs=16.7

Q ss_pred             CEEEEECCCCCC-------CC-C---CCCCCCCCCCCCCCEEEEE
Q ss_conf             316763022432-------22-4---5663232345443123440
Q gi|254780497|r  135 VMVIGSDTFSRI-------VD-W---SDRSTCVLFGDGAGALILE  168 (324)
Q Consensus       135 ~Lvv~~e~~S~~-------~d-~---~d~~~~~lfGDGAaA~ll~  168 (324)
                      +|||++-.+++.       ++ |   .|..++-+-|-||+|-+++
T Consensus       107 iLVvNcSlf~PtPSLsamivNrykmR~di~s~nLsGMGCSAglIs  151 (290)
T pfam08392       107 ILVVNCSLFNPTPSLSAMIVNRYKMRGDIKSYNLSGMGCSAGLIS  151 (290)
T ss_pred             EEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHH
T ss_conf             999967788888528999988606864300633667651134757


No 137
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=94.90  E-value=0.11  Score=30.59  Aligned_cols=37  Identities=14%  Similarity=0.062  Sum_probs=17.2

Q ss_pred             HHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf             8999999719787673365865193301269999999998
Q gi|254780497|r  257 IINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVK  296 (324)
Q Consensus       257 ~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~  296 (324)
                      .++.+.++.|+..+.+-..+.   |..+.-+.-.+.+.++
T Consensus       277 ~~~~~L~~~gl~~~dId~~vp---HQAn~ri~~~v~~~l~  313 (378)
T PRK06816        277 PYLELVDKRRLDPDAIDHFLP---HYSSEYFREKIVELLA  313 (378)
T ss_pred             HHHHHHHHCCCCHHHCCEEEC---CCCHHHHHHHHHHHHH
T ss_conf             999999984999899888812---6105999999999987


No 138
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=94.85  E-value=0.12  Score=30.20  Aligned_cols=16  Identities=31%  Similarity=0.368  Sum_probs=7.5

Q ss_pred             HHHHHHHHHHCCCCCC
Q ss_conf             7888898740010001
Q gi|254780497|r  230 LIEKVFDSTHLTIENI  245 (324)
Q Consensus       230 ~i~~~L~~~gl~~~di  245 (324)
                      .++.+.++.|+.++.+
T Consensus       255 ~~~~~~~~lgi~~~k~  270 (320)
T cd00830         255 IIEAVAKRLGLPEEKV  270 (320)
T ss_pred             HHHHHHHHHCCCHHHH
T ss_conf             9999999809698996


No 139
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=94.79  E-value=0.11  Score=30.49  Aligned_cols=14  Identities=0%  Similarity=0.086  Sum_probs=5.3

Q ss_pred             HHHHHHHCCCCHHH
Q ss_conf             99999971978767
Q gi|254780497|r  258 INSIVDKMKIPFDK  271 (324)
Q Consensus       258 ~~~~~~~lgl~~e~  271 (324)
                      ++.+.++.|+.++.
T Consensus       226 i~~~L~~~gl~~~d  239 (319)
T PRK09352        226 AREALEAAGLTPED  239 (319)
T ss_pred             HHHHHHHCCCCHHH
T ss_conf             99999874998323


No 140
>PRK07491 consensus
Probab=94.65  E-value=0.21  Score=28.77  Aligned_cols=91  Identities=14%  Similarity=0.162  Sum_probs=56.5

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--HHHHCCCHHHH---HHHHHHHHHHCCCCCC
Q ss_conf             777888898740010001210244444158999999719787673365--86519330126---9999999998068899
Q gi|254780497|r  228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--VDIHGNTSAAS---IPLALAVAVKEGRVKK  302 (324)
Q Consensus       228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--~~~~Gn~~sas---~~~~L~~~~~~g~l~~  302 (324)
                      ...++++|+++|++++|||.|=+|-+--...-.+.+.||++++|+..+  .=-+||=..++   +...|.+.++.   +.
T Consensus       293 v~A~~k~L~~agl~~~Did~~EinEAFA~q~l~~~~~lg~d~~kvN~~GGaiA~GHP~GaTGarl~~~l~~~L~~---~~  369 (392)
T PRK07491        293 IPASRKALEKAGWSVGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARVLNTLLFEMQR---RD  369 (392)
T ss_pred             HHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---HC
T ss_conf             999999999769985568877750567888999999839978886898548873888020089999999999998---09


Q ss_pred             CCEEEE-EEECCCCCEEEEEE
Q ss_conf             989999-99714501456878
Q gi|254780497|r  303 GDCLLL-EAMGGGFTSGTVLL  322 (324)
Q Consensus       303 Gd~vll-~~~G~G~s~~a~ll  322 (324)
                      |.+.+. ...|.|.-. ++++
T Consensus       370 ~~~gl~s~C~ggG~g~-A~li  389 (392)
T PRK07491        370 AKKGLATLCIGGGMGV-AMCV  389 (392)
T ss_pred             CCEEEEEECCCCCEEE-EEEE
T ss_conf             9989999623333078-9999


No 141
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=94.56  E-value=0.18  Score=29.22  Aligned_cols=92  Identities=18%  Similarity=0.225  Sum_probs=55.6

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCH---HHHHHH--HHHHCCCH---HHHHHHHHHHHHHCCC
Q ss_conf             777888898740010001210244444158999999719787---673365--86519330---1269999999998068
Q gi|254780497|r  228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPF---DKVIVT--VDIHGNTS---AASIPLALAVAVKEGR  299 (324)
Q Consensus       228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~---e~~~~~--~~~~Gn~~---sas~~~~L~~~~~~g~  299 (324)
                      ...++++|+++|++++|||.|=+|-+--...-.+.+.|++++   ||+..+  .=-+||=.   .+-+.+.|.+.++.  
T Consensus       301 v~A~~~~L~~agl~~~Did~~EinEAFA~q~la~~~~l~i~~~d~~kvN~~GGaiAlGHP~GaTGarl~~~l~~~L~~--  378 (404)
T PRK06205        301 VPATEKALARAGLTLDDIDLIELNEAFAAQVLAVLKEWGFSDADEERLNVNGSGISLGHPVGATGGRILATLLRELQR--  378 (404)
T ss_pred             HHHHHHHHHHCCCCHHHCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH--
T ss_conf             999999999859983107744631477888999999839898873408988548874888120189999999999997--


Q ss_pred             CCCCCEEEE-EEECCCCCEEEEEEE
Q ss_conf             899989999-997145014568786
Q gi|254780497|r  300 VKKGDCLLL-EAMGGGFTSGTVLLR  323 (324)
Q Consensus       300 l~~Gd~vll-~~~G~G~s~~a~llr  323 (324)
                       +.|.+.+. ...|.|.- .+++++
T Consensus       379 -~~~~~Gl~s~C~ggG~g-~A~~iE  401 (404)
T PRK06205        379 -RQGRYGLETMCIGGGQG-LAAVFE  401 (404)
T ss_pred             -HCCCEEEEEECCCCCEE-EEEEEE
T ss_conf             -09998999964210304-389999


No 142
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=94.54  E-value=0.074  Score=31.61  Aligned_cols=16  Identities=19%  Similarity=0.358  Sum_probs=7.7

Q ss_pred             HHHHHHHHHHCCCCCC
Q ss_conf             7888898740010001
Q gi|254780497|r  230 LIEKVFDSTHLTIENI  245 (324)
Q Consensus       230 ~i~~~L~~~gl~~~di  245 (324)
                      .++.+.++.++.++.+
T Consensus       258 ~~~~i~~~lgl~~~k~  273 (327)
T CHL00203        258 ILEAVADRLSIPHSKM  273 (327)
T ss_pred             HHHHHHHHHCCCHHHH
T ss_conf             9999999819797886


No 143
>PRK06845 consensus
Probab=94.48  E-value=0.23  Score=28.53  Aligned_cols=92  Identities=18%  Similarity=0.218  Sum_probs=57.4

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--HHHHCCCHHHH---HHHHHHHHHHCCCCCC
Q ss_conf             777888898740010001210244444158999999719787673365--86519330126---9999999998068899
Q gi|254780497|r  228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--VDIHGNTSAAS---IPLALAVAVKEGRVKK  302 (324)
Q Consensus       228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--~~~~Gn~~sas---~~~~L~~~~~~g~l~~  302 (324)
                      ...++++|+++|++++|||.|=+|-+--...-...+.|||+++++..+  .--+||=..|+   +...|-+.++.   +.
T Consensus       293 ~~A~~~al~~agl~~~Did~~EinEAFA~~~l~~~~~lgl~~~~vN~~GGaiA~GHPiGATG~r~v~~l~~~L~~---~~  369 (392)
T PRK06845        293 APAIRAALERAGLTLSDMDLVEVNEAFAAQYLAVEKELGLNPEITNVNGGAIALGHPLGASGARITITLAYELKR---RG  369 (392)
T ss_pred             HHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---CC
T ss_conf             999999999859996568866761467889999999709891542888418860988110489999999999987---09


Q ss_pred             CCEEEE-EEECCCCCEEEEEEE
Q ss_conf             989999-997145014568786
Q gi|254780497|r  303 GDCLLL-EAMGGGFTSGTVLLR  323 (324)
Q Consensus       303 Gd~vll-~~~G~G~s~~a~llr  323 (324)
                      |.+.+. ...|.|.- .+++++
T Consensus       370 g~~gl~~~c~ggG~g-~a~~iE  390 (392)
T PRK06845        370 AKYGVGSACIGGGQG-IALVLE  390 (392)
T ss_pred             CCEEEEEEEEECCCE-EEEEEE
T ss_conf             988999870000303-179998


No 144
>PRK08234 consensus
Probab=94.43  E-value=0.23  Score=28.42  Aligned_cols=93  Identities=18%  Similarity=0.165  Sum_probs=58.5

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--HHHHCCCH---HHHHHHHHHHHHHCCCCC
Q ss_conf             7777888898740010001210244444158999999719787673365--86519330---126999999999806889
Q gi|254780497|r  227 AVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--VDIHGNTS---AASIPLALAVAVKEGRVK  301 (324)
Q Consensus       227 ~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--~~~~Gn~~---sas~~~~L~~~~~~g~l~  301 (324)
                      -...++++|+++|++++|||.|=+|-+--...-...+.|+++++|+..+  .=-+||=.   .+-+.+.|-+.++.   +
T Consensus       299 p~~A~~~~L~ragl~~~Did~~EinEAFA~~~l~~~~~l~i~~~kvN~~GGaiAlGHP~GaTGarl~~~l~~~L~~---~  375 (400)
T PRK08234        299 PVFATRKALRRAGLTVDDIDLVELNEAFAAQALACIRELGLDRAKVNVNGGAIALGHPLGASGARILTTLIYEMRR---R  375 (400)
T ss_pred             HHHHHHHHHHHCCCCHHHCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---C
T ss_conf             6999999998749984228756760777888999999848978877898548874888032189999999999998---0


Q ss_pred             CCCEEEE-EEECCCCCEEEEEEE
Q ss_conf             9989999-997145014568786
Q gi|254780497|r  302 KGDCLLL-EAMGGGFTSGTVLLR  323 (324)
Q Consensus       302 ~Gd~vll-~~~G~G~s~~a~llr  323 (324)
                      .+.+.+. ...|.|.-. +++++
T Consensus       376 ~~~~Gl~s~C~ggG~g~-a~liE  397 (400)
T PRK08234        376 GSRYGLATMCIGVGQGI-ATIVE  397 (400)
T ss_pred             CCCEEEEEECCCCCCEE-EEEEE
T ss_conf             99889999643214032-89999


No 145
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=94.20  E-value=0.32  Score=27.58  Aligned_cols=91  Identities=24%  Similarity=0.327  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--HHHHCCCH---HHHHHHHHHHHHHCCCCCC
Q ss_conf             777888898740010001210244444158999999719787673365--86519330---1269999999998068899
Q gi|254780497|r  228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--VDIHGNTS---AASIPLALAVAVKEGRVKK  302 (324)
Q Consensus       228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--~~~~Gn~~---sas~~~~L~~~~~~g~l~~  302 (324)
                      ...++++|+++|++++|||.|=+|-+--...-...+.|++++||+..+  -=-+||=.   .+-+.+.|.+.++.   +.
T Consensus       303 v~A~~k~L~~agl~~~did~~EinEAFA~q~la~~~~l~id~~kvN~~GGaiAlGHP~GaSGariv~~l~~~L~~---~~  379 (402)
T PRK08242        303 VPATRKALAKAGLTISDIDLFELNEAFASVVLRFMKALGIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELER---RG  379 (402)
T ss_pred             HHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---CC
T ss_conf             999999999869984568878860666888999999849988884998667874888035589999999999987---09


Q ss_pred             CCEEEE-EEECCCCCEEEEEE
Q ss_conf             989999-99714501456878
Q gi|254780497|r  303 GDCLLL-EAMGGGFTSGTVLL  322 (324)
Q Consensus       303 Gd~vll-~~~G~G~s~~a~ll  322 (324)
                      |.+.+. ...|.|.-. ++++
T Consensus       380 ~~~Gl~s~C~ggG~g~-A~~i  399 (402)
T PRK08242        380 KRTALITLCVGGGMGI-ATII  399 (402)
T ss_pred             CCEEEEEECCCCCCEE-EEEE
T ss_conf             9889999733336032-8999


No 146
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=94.13  E-value=0.082  Score=31.32  Aligned_cols=27  Identities=33%  Similarity=0.297  Sum_probs=13.2

Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf             999999999997402123544336650
Q gi|254780497|r   54 SLGEAAARDALHHAEMSVDDIDLIIVA   80 (324)
Q Consensus        54 ~la~~Aa~~al~~a~~~~~~Id~ii~~   80 (324)
                      +...++++++|+++|++|+|||++...
T Consensus       145 ~~~~~~i~~al~~agl~~~dId~v~~H  171 (254)
T cd00327         145 EGLARAARKALEGAGLTPSDIDYVEAH  171 (254)
T ss_pred             HHHHHHHHHHHHHCCCCHHHCCEEEEC
T ss_conf             899999999999839986452579978


No 147
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.12  E-value=0.17  Score=29.35  Aligned_cols=18  Identities=17%  Similarity=0.008  Sum_probs=9.9

Q ss_pred             CCCCCCCCCCCEEEEECC
Q ss_conf             323234544312344026
Q gi|254780497|r  153 STCVLFGDGAGALILEGV  170 (324)
Q Consensus       153 ~~~~lfGDGAaA~ll~~~  170 (324)
                      ...+-+||-.--++++++
T Consensus       227 ~Mgwdv~d~G~~~vlSrd  244 (356)
T COG3424         227 IMGWDVGDQGLKVVLSRD  244 (356)
T ss_pred             CCCEEECCCCEEEEECCC
T ss_conf             011530488479997573


No 148
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=94.08  E-value=0.23  Score=28.52  Aligned_cols=15  Identities=20%  Similarity=0.337  Sum_probs=11.8

Q ss_pred             CCCCCCCEEEEECCC
Q ss_conf             345443123440265
Q gi|254780497|r  157 LFGDGAGALILEGVE  171 (324)
Q Consensus       157 lfGDGAaA~ll~~~~  171 (324)
                      -+.|||+|++|.+.+
T Consensus       246 ~~~DGAAavll~Se~  260 (390)
T PRK06504        246 QICDGASGVMVVNER  260 (390)
T ss_pred             CCCCHHHHHHHHHHH
T ss_conf             777616888874499


No 149
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.95  E-value=0.059  Score=32.23  Aligned_cols=11  Identities=0%  Similarity=0.060  Sum_probs=4.0

Q ss_pred             HHHHHCCCCHH
Q ss_conf             99997197876
Q gi|254780497|r  260 SIVDKMKIPFD  270 (324)
Q Consensus       260 ~~~~~lgl~~e  270 (324)
                      .+.++.|+..+
T Consensus       238 ~~L~~~gl~~~  248 (329)
T PRK07204        238 KLLMDTGYSLA  248 (329)
T ss_pred             HHHHHCCCCHH
T ss_conf             99987199978


No 150
>PRK06840 hypothetical protein; Validated
Probab=93.95  E-value=0.072  Score=31.69  Aligned_cols=16  Identities=13%  Similarity=0.183  Sum_probs=10.3

Q ss_pred             HHHHHHHHCCCCHHHH
Q ss_conf             8999999719787673
Q gi|254780497|r  257 IINSIVDKMKIPFDKV  272 (324)
Q Consensus       257 ~~~~~~~~lgl~~e~~  272 (324)
                      +++..+++.|+.++.+
T Consensus       242 ~i~~~L~~~gl~~~DI  257 (337)
T PRK06840        242 VIREALRKSGYTPKDI  257 (337)
T ss_pred             HHHHHHHHCCCCHHHC
T ss_conf             9999999849995786


No 151
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=93.90  E-value=0.32  Score=27.52  Aligned_cols=91  Identities=21%  Similarity=0.213  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--HHHHCCCH---HHHHHHHHHHHHHCCCCCC
Q ss_conf             777888898740010001210244444158999999719787673365--86519330---1269999999998068899
Q gi|254780497|r  228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--VDIHGNTS---AASIPLALAVAVKEGRVKK  302 (324)
Q Consensus       228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--~~~~Gn~~---sas~~~~L~~~~~~g~l~~  302 (324)
                      ...++++|+++|++++|||.|=+|-+--...-...+.||+++||+..+  .=-+||=.   .+-+...|-+.++.   +.
T Consensus       305 v~A~~~~L~~agl~~~Did~~EinEAFA~q~l~~~~~lgid~~kvNv~GGaiAlGHP~GAsGarl~~~l~~~L~~---~~  381 (405)
T PRK07851        305 IEASKQALARAGMTIDDIDLVEINEAFAVQVLGSARELGIDEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQT---HD  381 (405)
T ss_pred             HHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---CC
T ss_conf             999999999769980248755640667888999999848988881998558873887031179999999999998---09


Q ss_pred             CCEEEE-EEECCCCCEEEEE
Q ss_conf             989999-9971450145687
Q gi|254780497|r  303 GDCLLL-EAMGGGFTSGTVL  321 (324)
Q Consensus       303 Gd~vll-~~~G~G~s~~a~l  321 (324)
                      |.+.+. ...|.|.....++
T Consensus       382 ~~~gl~t~C~ggG~g~A~~i  401 (405)
T PRK07851        382 KTFGLETMCVGGGQGMAMVI  401 (405)
T ss_pred             CCEEEEEECCCCCEEEEEEE
T ss_conf             98899996331040538999


No 152
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=93.89  E-value=0.29  Score=27.83  Aligned_cols=91  Identities=20%  Similarity=0.211  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--HHHHCCCHHH---HHHHHHHHHHHCCCCCC
Q ss_conf             777888898740010001210244444158999999719787673365--8651933012---69999999998068899
Q gi|254780497|r  228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--VDIHGNTSAA---SIPLALAVAVKEGRVKK  302 (324)
Q Consensus       228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--~~~~Gn~~sa---s~~~~L~~~~~~g~l~~  302 (324)
                      ...++++|+++|++++|||.|=+|-+--...-.+.+.||+++||+..+  .--+||=..+   -+.+.|-+.++.   +.
T Consensus       283 ~~A~~~~l~~agl~~~Did~~EinEAFA~~~l~~~~~lg~~~~kvN~~GGaia~GHP~GATG~r~~~~l~~~L~~---~~  359 (382)
T PRK07801        283 IPATRYALDKTGLTIDDIDVVEINEAFAPVVMAWLKETGADPEKVNPNGGAIALGHPLGATGAKLMTTLLHELER---TG  359 (382)
T ss_pred             HHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---CC
T ss_conf             999999999849981138855740366888999999828992435888439871988032799999999999987---09


Q ss_pred             CCEEEE-EEECCCCCEEEEEE
Q ss_conf             989999-99714501456878
Q gi|254780497|r  303 GDCLLL-EAMGGGFTSGTVLL  322 (324)
Q Consensus       303 Gd~vll-~~~G~G~s~~a~ll  322 (324)
                      |.+.+. ...|.|.-. ++++
T Consensus       360 ~~~g~~s~c~ggG~g~-a~ii  379 (382)
T PRK07801        360 GRYGLQTMCEGGGTAN-VTII  379 (382)
T ss_pred             CCEEEEEECCCCCCEE-EEEE
T ss_conf             9989999533013232-6989


No 153
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=93.85  E-value=0.32  Score=27.58  Aligned_cols=14  Identities=7%  Similarity=0.207  Sum_probs=7.7

Q ss_pred             CCCCCCCEEEEECC
Q ss_conf             12354433665012
Q gi|254780497|r   69 MSVDDIDLIIVATS   82 (324)
Q Consensus        69 ~~~~~Id~ii~~s~   82 (324)
                      |.-.+.|.+|++.+
T Consensus       158 I~~G~~d~~i~gg~  171 (379)
T PRK05952        158 IQTGQCQRVIAGAV  171 (379)
T ss_pred             HHCCCCCEEEEEEE
T ss_conf             98399887986787


No 154
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=93.68  E-value=0.52  Score=26.23  Aligned_cols=92  Identities=21%  Similarity=0.300  Sum_probs=54.4

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH--HHHHH--HHHHCCCH---HHHHHHHHHHHHHCCCC
Q ss_conf             7778888987400100012102444441589999997197876--73365--86519330---12699999999980688
Q gi|254780497|r  228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD--KVIVT--VDIHGNTS---AASIPLALAVAVKEGRV  300 (324)
Q Consensus       228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e--~~~~~--~~~~Gn~~---sas~~~~L~~~~~~g~l  300 (324)
                      ...++++|+++|++++|||.|=+|-+--...-...+.||++.|  |+..+  .--+||=.   .+-+.+.|.+.++.   
T Consensus       299 v~A~~~~L~~agl~~~Did~~EinEAFA~~~l~~~~~lgl~~d~~kvN~~GGaiA~GHP~GATGarl~~~l~~~L~~---  375 (401)
T PRK08131        299 VEAIKKALARAGLTLDDMDIIEINEAFASQVLSCLKGLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTAARELQR---  375 (401)
T ss_pred             HHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---
T ss_conf             99999999975998123877785026688899999980999887808988668873888020089999999999987---


Q ss_pred             CCCCEEEEE-EECCCCCEEEEEEE
Q ss_conf             999899999-97145014568786
Q gi|254780497|r  301 KKGDCLLLE-AMGGGFTSGTVLLR  323 (324)
Q Consensus       301 ~~Gd~vll~-~~G~G~s~~a~llr  323 (324)
                      +.|.+.+.. ..|.|.- .+++++
T Consensus       376 ~~~~~g~~t~c~ggG~g-~a~~iE  398 (401)
T PRK08131        376 RGGRYAVVSLCIGVGQG-LAMVIE  398 (401)
T ss_pred             CCCCEEEEEECCCCCCE-EEEEEE
T ss_conf             19988999962210413-089999


No 155
>PRK07855 lipid-transfer protein; Provisional
Probab=93.60  E-value=0.22  Score=28.66  Aligned_cols=16  Identities=25%  Similarity=0.511  Sum_probs=10.8

Q ss_pred             CC--EEEEEEEEEECCCCE
Q ss_conf             92--269999999649841
Q gi|254780497|r    1 MI--RSTVRGIGLSLPRRV   17 (324)
Q Consensus         1 M~--~~~I~~~g~ylP~~~   17 (324)
                      ||  +|.|.|+|.. |-.+
T Consensus         1 ~m~~~vAIvGvG~t-~f~r   18 (386)
T PRK07855          1 MLSGKAAIVGIGAT-EFSK   18 (386)
T ss_pred             CCCCCEEEEEEEEE-CCEE
T ss_conf             98998899975530-2246


No 156
>PRK08041 consensus
Probab=93.59  E-value=0.43  Score=26.77  Aligned_cols=92  Identities=14%  Similarity=0.152  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--HHHHCCCHH---HHHHHHHHHHHHCCCCCC
Q ss_conf             777888898740010001210244444158999999719787673365--865193301---269999999998068899
Q gi|254780497|r  228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--VDIHGNTSA---ASIPLALAVAVKEGRVKK  302 (324)
Q Consensus       228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--~~~~Gn~~s---as~~~~L~~~~~~g~l~~  302 (324)
                      ...++++|+++|++++|||.|=+|-+--...-...+.|+++++|+..+  .--+||=..   +-+.+.|-+.++.   +.
T Consensus       293 v~A~~k~L~~agl~~~Did~~EinEAFA~q~l~~~~~l~~d~~~vN~~GGaiA~GHP~GATGarl~~~l~~~L~~---~~  369 (391)
T PRK08041        293 VYATRRCLERVGWQLADVDLIEANEAFAAQALSVGKMLEWDERRVNVNGGAIALGHPIGASGCRILVSLVHEMVK---RN  369 (391)
T ss_pred             HHHHHHHHHHCCCCHHHCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---HC
T ss_conf             999999999859985448678860477999999999738983638988528874888121589999999999998---19


Q ss_pred             CCEEEEE-EECCCCCEEEEEEE
Q ss_conf             9899999-97145014568786
Q gi|254780497|r  303 GDCLLLE-AMGGGFTSGTVLLR  323 (324)
Q Consensus       303 Gd~vll~-~~G~G~s~~a~llr  323 (324)
                      |.+.+.. ..|.|.- .+++++
T Consensus       370 ~~~gl~s~C~ggG~g-~A~~iE  390 (391)
T PRK08041        370 ARKGLATLCIGGGQG-VALTIE  390 (391)
T ss_pred             CCEEEEEECCCCCEE-EEEEEE
T ss_conf             998999973433306-799996


No 157
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=93.54  E-value=0.37  Score=27.15  Aligned_cols=93  Identities=15%  Similarity=0.196  Sum_probs=58.5

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH--HHHCCCH---HHHHHHHHHHHHHCCCCC
Q ss_conf             77778888987400100012102444441589999997197876733658--6519330---126999999999806889
Q gi|254780497|r  227 AVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTV--DIHGNTS---AASIPLALAVAVKEGRVK  301 (324)
Q Consensus       227 ~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~--~~~Gn~~---sas~~~~L~~~~~~g~l~  301 (324)
                      -...++++|+++|++.+|||.|=+|-+--...-.+.+.|+++.||+..+-  =-+||=.   .+-+...|-+.++.   +
T Consensus       292 p~~A~~k~L~~agl~~~Did~~EinEAFA~q~l~~~~~l~~d~~kvN~~GGaiAlGHP~GaTGarl~~~l~~~L~~---~  368 (392)
T PRK06633        292 PVPASQKALSKAGWSVNDLEVIEVNEAFAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHNLRR---A  368 (392)
T ss_pred             HHHHHHHHHHHCCCCHHHCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---C
T ss_conf             1999999999849983108678860366888999998709978886898558874788111589999999999987---1


Q ss_pred             CCCEEEEE-EECCCCCEEEEEEE
Q ss_conf             99899999-97145014568786
Q gi|254780497|r  302 KGDCLLLE-AMGGGFTSGTVLLR  323 (324)
Q Consensus       302 ~Gd~vll~-~~G~G~s~~a~llr  323 (324)
                      .|.+.+.. ..|.|.- .+++++
T Consensus       369 ~~~~Gl~s~C~ggG~G-~A~iiE  390 (392)
T PRK06633        369 KAKKGLVTLCIGGGMG-MAMCVE  390 (392)
T ss_pred             CCCEEEEEECCCCCHH-HEEEEE
T ss_conf             9998999962310430-369998


No 158
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=93.48  E-value=0.34  Score=27.37  Aligned_cols=16  Identities=25%  Similarity=0.360  Sum_probs=12.0

Q ss_pred             CCCCCCCEEEEECCCC
Q ss_conf             3454431234402654
Q gi|254780497|r  157 LFGDGAGALILEGVEV  172 (324)
Q Consensus       157 lfGDGAaA~ll~~~~~  172 (324)
                      -..|||+|+||.+.+.
T Consensus       243 ~~~DGAAavll~s~~~  258 (387)
T PRK07850        243 QISDGAAAVLWMDEDR  258 (387)
T ss_pred             CCCCHHHHHHHHHHHH
T ss_conf             5554068988836999


No 159
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=93.39  E-value=0.36  Score=27.24  Aligned_cols=17  Identities=41%  Similarity=0.489  Sum_probs=12.6

Q ss_pred             CCCCCCCEEEEECCCCC
Q ss_conf             34544312344026544
Q gi|254780497|r  157 LFGDGAGALILEGVEVK  173 (324)
Q Consensus       157 lfGDGAaA~ll~~~~~~  173 (324)
                      -+.|||+|+||-+.+..
T Consensus       255 ~lsDGAAavll~s~~~a  271 (399)
T PRK09052        255 QTSDGAGAVILVSEKAL  271 (399)
T ss_pred             CCCCHHHHHHHHHHHHH
T ss_conf             44306788877349999


No 160
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=93.35  E-value=0.37  Score=27.18  Aligned_cols=91  Identities=16%  Similarity=0.158  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH--HHHHH--HHHHCCCHH---HHHHHHHHHHHHCCCC
Q ss_conf             7778888987400100012102444441589999997197876--73365--865193301---2699999999980688
Q gi|254780497|r  228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD--KVIVT--VDIHGNTSA---ASIPLALAVAVKEGRV  300 (324)
Q Consensus       228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e--~~~~~--~~~~Gn~~s---as~~~~L~~~~~~g~l  300 (324)
                      ...++++|+++|++++|||.|=+|-+--...-...+.||+++|  |+..+  .=-+||=..   +=+...|-+.++.   
T Consensus       300 ~~A~~~~L~~agl~~~DiD~~EinEAFA~q~l~~~~~lg~~~d~~kvN~~GGaiAlGHP~GATGari~~~l~~~L~~---  376 (401)
T PRK09050        300 APATRKLLARLGLTIDQFDVIELNEAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLER---  376 (401)
T ss_pred             HHHHHHHHHHCCCCHHHCCEEEECHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---
T ss_conf             99999999985998544878997024377799999984999885507999678875888022289999999999998---


Q ss_pred             CCCCEEEEE-EECCCCCEEEEEE
Q ss_conf             999899999-9714501456878
Q gi|254780497|r  301 KKGDCLLLE-AMGGGFTSGTVLL  322 (324)
Q Consensus       301 ~~Gd~vll~-~~G~G~s~~a~ll  322 (324)
                      +.|.+.+.. ..|.|.-. ++++
T Consensus       377 ~~~~~gl~s~C~ggG~g~-A~~i  398 (401)
T PRK09050        377 TGGRYALCTMCIGVGQGI-ALAI  398 (401)
T ss_pred             HCCCEEEEEECCCCCCEE-EEEE
T ss_conf             099989999754335044-8999


No 161
>pfam02803 Thiolase_C Thiolase, C-terminal domain. Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase.
Probab=93.32  E-value=0.22  Score=28.63  Aligned_cols=99  Identities=24%  Similarity=0.250  Sum_probs=62.1

Q ss_pred             CCCHHHH---HHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC--------CCCCCCCCCCCCHH
Q ss_conf             8899999---999999999740212354433665012233458985310011220268--------64444210122003
Q gi|254780497|r   49 DETTASL---GEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR--------GFAFDMQAVCSGFV  117 (324)
Q Consensus        49 ~e~~~~l---a~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~--------~~~~di~~~C~~~~  117 (324)
                      +-++.+|   .+.|++++|++++++.+|||++=..-.+.     +.+-...++||++.        +.++--=.||+|.-
T Consensus        14 g~~P~~~~~ap~~A~~~lL~r~gl~~~Did~~EinEAFA-----~~~l~~~~~l~id~ekvN~~GGaiAlGHP~GaSGar   88 (123)
T pfam02803        14 GVDPAIMGIGPAYAIPKALKKAGLTVNDIDLFEINEAFA-----AQALAVAKDLGIDPEKVNVNGGAIALGHPLGASGAR   88 (123)
T ss_pred             ECCHHHHCCCHHHHHHHHHHHCCCCHHHCCEEEECHHHH-----HHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHH
T ss_conf             459889613699999999998299855466456414567-----778999997198920148988734427884662489


Q ss_pred             HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf             4678889989641556531676302243222456632323454431234402
Q gi|254780497|r  118 YAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGDGAGALILEG  169 (324)
Q Consensus       118 ~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGDGAaA~ll~~  169 (324)
                      ..+.++..|-+.+ .+++++..+-                -|..+.|++||+
T Consensus        89 lv~~l~~~L~~~~-~~~G~as~C~----------------gGG~g~A~llER  123 (123)
T pfam02803        89 ILVTLLHELKRRG-GKYGLATLCI----------------GGGQGVAMIIER  123 (123)
T ss_pred             HHHHHHHHHHHHC-CCEEEEEEEC----------------CCCEEEEEEEEC
T ss_conf             9999999999839-9999999703----------------556088999979


No 162
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=93.29  E-value=0.52  Score=26.19  Aligned_cols=91  Identities=22%  Similarity=0.255  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--HHHHCCCHHH---HHHHHHHHHHHCCCCCC
Q ss_conf             777888898740010001210244444158999999719787673365--8651933012---69999999998068899
Q gi|254780497|r  228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--VDIHGNTSAA---SIPLALAVAVKEGRVKK  302 (324)
Q Consensus       228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--~~~~Gn~~sa---s~~~~L~~~~~~g~l~~  302 (324)
                      ...++++|+++|++++|||.|=+|-+--..--...+.||++++++..+  .--+||=..|   -+.+.|.+.++.   +.
T Consensus       295 ~~A~~~al~~agl~~~Did~~EinEAFA~~~l~~~~~lg~~~~~vN~~GGaia~GHP~GATGar~v~~l~~~L~~---~~  371 (394)
T PRK06445        295 VPASRKALEKAGLKVKDIDLWEINEAFAVVVLYAIKELGIDPERVNIRGGAIAIGHPLGATGARIIGTLARQLQI---KG  371 (394)
T ss_pred             HHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---HC
T ss_conf             999999999739986678866760377888999999809887765898538872988021389999999999998---19


Q ss_pred             CCEEEE-EEECCCCCEEEEEE
Q ss_conf             989999-99714501456878
Q gi|254780497|r  303 GDCLLL-EAMGGGFTSGTVLL  322 (324)
Q Consensus       303 Gd~vll-~~~G~G~s~~a~ll  322 (324)
                      |.+.+. ...|.|.-. ++++
T Consensus       372 ~~~g~~t~c~ggG~g~-A~~i  391 (394)
T PRK06445        372 KDYGVATLCVGGGQGA-AVVL  391 (394)
T ss_pred             CCEEEEEECCCCCCEE-EEEE
T ss_conf             9989999522003120-7999


No 163
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=93.28  E-value=0.4  Score=26.97  Aligned_cols=93  Identities=15%  Similarity=0.156  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH--HHHCCCHHH---HHHHHHHHHHHCCCCC
Q ss_conf             77778888987400100012102444441589999997197876733658--651933012---6999999999806889
Q gi|254780497|r  227 AVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTV--DIHGNTSAA---SIPLALAVAVKEGRVK  301 (324)
Q Consensus       227 ~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~--~~~Gn~~sa---s~~~~L~~~~~~g~l~  301 (324)
                      -...++++|+++|++++|||.|=+|-+-....-.+.+.|+++++|+..+-  =-+||=..+   -+.+.|-+.++.   +
T Consensus       293 p~~A~~k~L~~agl~~~Did~~EinEAFA~q~l~~~~~l~id~~kvN~~GGaiAlGHP~GATGarl~~~l~~~L~~---~  369 (392)
T PRK05656        293 PVSATRRCLDKAGWSLAELDLIEANEAFAAQSLAVGKELGWDAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIR---R  369 (392)
T ss_pred             HHHHHHHHHHHCCCCHHCCCEEEECCHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---C
T ss_conf             9999999999849983108777852167899999999848985766888548871888031379999999999987---3


Q ss_pred             CCCEEEEE-EECCCCCEEEEEEE
Q ss_conf             99899999-97145014568786
Q gi|254780497|r  302 KGDCLLLE-AMGGGFTSGTVLLR  323 (324)
Q Consensus       302 ~Gd~vll~-~~G~G~s~~a~llr  323 (324)
                      .|.+.+.. ..|.|.- .+++++
T Consensus       370 ~~~~gl~s~C~gGG~g-~A~~iE  391 (392)
T PRK05656        370 DAKKGLATLCIGGGQG-VALAIE  391 (392)
T ss_pred             CCCEEEEEECCCCCCE-EEEEEE
T ss_conf             9998999972443308-899997


No 164
>PRK04262 hypothetical protein; Provisional
Probab=93.15  E-value=0.12  Score=30.37  Aligned_cols=26  Identities=15%  Similarity=0.138  Sum_probs=11.7

Q ss_pred             HHHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf             99999999974021235443366501
Q gi|254780497|r   56 GEAAARDALHHAEMSVDDIDLIIVAT   81 (324)
Q Consensus        56 a~~Aa~~al~~a~~~~~~Id~ii~~s   81 (324)
                      ..++++++|+++|++++|||++|+..
T Consensus       211 ~~~~~~~~l~~~g~~~~did~~v~HQ  236 (346)
T PRK04262        211 IISAAKGLMEKLGTKPSDYDYAVFHQ  236 (346)
T ss_pred             HHHHHHHHHHHCCCCHHHCCEEECCC
T ss_conf             99999999998299978858895167


No 165
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=93.12  E-value=0.47  Score=26.48  Aligned_cols=13  Identities=23%  Similarity=0.199  Sum_probs=6.6

Q ss_pred             CCCCCCEEEEECC
Q ss_conf             2354433665012
Q gi|254780497|r   70 SVDDIDLIIVATS   82 (324)
Q Consensus        70 ~~~~Id~ii~~s~   82 (324)
                      .-.+.|.+|++.+
T Consensus       175 ~~G~~d~~i~Gg~  187 (395)
T PRK09185        175 EAGLCDAVIVGGV  187 (395)
T ss_pred             HCCCCCEEEEECC
T ss_conf             8599888998021


No 166
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=93.07  E-value=0.17  Score=29.37  Aligned_cols=92  Identities=22%  Similarity=0.310  Sum_probs=50.2

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCHH----HHH------HHHHHCCC-------CHHHHHHH--HHHHCCCH---HH
Q ss_conf             77788889874001000121024444415----899------99997197-------87673365--86519330---12
Q gi|254780497|r  228 VELIEKVFDSTHLTIENIDWFVPHQANWR----IIN------SIVDKMKI-------PFDKVIVT--VDIHGNTS---AA  285 (324)
Q Consensus       228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~----~~~------~~~~~lgl-------~~e~~~~~--~~~~Gn~~---sa  285 (324)
                      ...++++|+++|++++|||.|=+|-+--.    .++      ...+.||+       +++|+..+  .=-+||=.   .+
T Consensus       310 v~A~~k~L~~agl~~~DiD~~EinEAFAaq~la~~~~~~~~~~~~~~lG~~~~~~~id~~kvN~~GGaiAlGHP~GaTGa  389 (426)
T PRK08170        310 VHAATPLLQRHGLTLEDIDYWEINEAFAAQVLACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGA  389 (426)
T ss_pred             HHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHH
T ss_conf             99999999980998676552434046689999999874001356776076533456981228988548874777210389


Q ss_pred             HHHHHHHHHHHCCCCCCCCEEEEE-EECCCCCEEEEEEE
Q ss_conf             699999999980688999899999-97145014568786
Q gi|254780497|r  286 SIPLALAVAVKEGRVKKGDCLLLE-AMGGGFTSGTVLLR  323 (324)
Q Consensus       286 s~~~~L~~~~~~g~l~~Gd~vll~-~~G~G~s~~a~llr  323 (324)
                      -+...|.+.+++   +.|.+.+.. ..|.|.- .+++++
T Consensus       390 rl~~~l~~~L~~---~~~~~gl~t~C~ggG~g-~A~llE  424 (426)
T PRK08170        390 RIVLHLLHALKR---RGTKRGIAAICIGGGQG-GAMLVE  424 (426)
T ss_pred             HHHHHHHHHHHH---HCCCEEEEEECCHHHHH-HEEEEE
T ss_conf             999999999998---19998999862202240-458897


No 167
>pfam02801 Ketoacyl-synt_C Beta-ketoacyl synthase, C-terminal domain. The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=93.03  E-value=0.26  Score=28.09  Aligned_cols=78  Identities=14%  Similarity=0.150  Sum_probs=50.0

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH-----HHHHHHHCCCCHHHH-HH-HHHHHCCCHHHHHHHHHHH---H
Q ss_conf             777777888898740010001210244444158-----999999719787673-36-5865193301269999999---9
Q gi|254780497|r  225 EKAVELIEKVFDSTHLTIENIDWFVPHQANWRI-----INSIVDKMKIPFDKV-IV-TVDIHGNTSAASIPLALAV---A  294 (324)
Q Consensus       225 ~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~-----~~~~~~~lgl~~e~~-~~-~~~~~Gn~~sas~~~~L~~---~  294 (324)
                      ....++++++|++++++++||+++-.|-.+-..     .+.+.+.++=....+ +. +=..+||+.+++=.+.+-.   .
T Consensus        25 ~~~~~~i~~Al~~agi~p~~I~~i~aHgtgT~~gD~~E~~ai~~~f~~~~~~~~i~S~Ks~~GH~~~AsG~~~li~~~l~  104 (117)
T pfam02801        25 PAQARAIRAALADAGLDPEDVDYVEAHGTGTPLGDPIEAEALKAVFGPGRRPLPVGSVKSNIGHLEAAAGVAGLIKAVLA  104 (117)
T ss_pred             HHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             99999999999990989989798987537685437999999999966377887677741153556376799999999999


Q ss_pred             HHCCCCCC
Q ss_conf             98068899
Q gi|254780497|r  295 VKEGRVKK  302 (324)
Q Consensus       295 ~~~g~l~~  302 (324)
                      ++++.+.|
T Consensus       105 l~~g~ipp  112 (117)
T pfam02801       105 LRHGVIPP  112 (117)
T ss_pred             HHCCCCCC
T ss_conf             97697388


No 168
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.86  E-value=0.49  Score=26.39  Aligned_cols=16  Identities=13%  Similarity=-0.002  Sum_probs=9.5

Q ss_pred             HHHHHHHCCCCHHHHH
Q ss_conf             9999997197876733
Q gi|254780497|r  258 INSIVDKMKIPFDKVI  273 (324)
Q Consensus       258 ~~~~~~~lgl~~e~~~  273 (324)
                      ++.++++.|+.++.+-
T Consensus       277 i~~~L~~~gl~~~DId  292 (372)
T PRK07515        277 IVEHLAENGLTPADVK  292 (372)
T ss_pred             HHHHHHHHCCCHHHCC
T ss_conf             9999998298988899


No 169
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=92.71  E-value=0.37  Score=27.18  Aligned_cols=17  Identities=24%  Similarity=0.182  Sum_probs=12.6

Q ss_pred             CCCCCCCEEEEECCCCC
Q ss_conf             34544312344026544
Q gi|254780497|r  157 LFGDGAGALILEGVEVK  173 (324)
Q Consensus       157 lfGDGAaA~ll~~~~~~  173 (324)
                      -+.|||+|+||.+.+..
T Consensus       216 ~~sDGAAavll~se~~A  232 (361)
T PRK06690        216 GVNDGACAVLVMEEGQA  232 (361)
T ss_pred             CCCCHHHHHHHHCHHHH
T ss_conf             30007899998579999


No 170
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=92.70  E-value=0.34  Score=27.41  Aligned_cols=89  Identities=17%  Similarity=0.201  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHH---HHH---HHHHH---CCCHHHHHHHHHHHHH
Q ss_conf             77777788889874001000121024444415899999971978767---336---58651---9330126999999999
Q gi|254780497|r  225 EKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDK---VIV---TVDIH---GNTSAASIPLALAVAV  295 (324)
Q Consensus       225 ~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~---~~~---~~~~~---Gn~~sas~~~~L~~~~  295 (324)
                      ..+.-..+++|+.+|+..+|||+|=+-.=-....+..++.|||+.+.   -.+   =+.-+   ||.++--....+.+.+
T Consensus       294 ~a~~~~~~~al~~ag~~~~di~~~DlYSCFP~av~~~~~~lgl~~~~~~r~lTvTGGl~f~GGp~NnY~~hsia~mv~~l  373 (502)
T PRK08257        294 PAIRAAGARALALAGLGIDDIDAFDLYSCFPSAVQMAARELGLPLDDDPRPLTVTGGLTFFGGPGNNYVTHSIAEMVERL  373 (502)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCEEEHHHCCHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             89999999999980998001461103421638999999973999667888603406755567875037899999999999


Q ss_pred             HCCCCCCCCEEEEEEECCCCC
Q ss_conf             806889998999999714501
Q gi|254780497|r  296 KEGRVKKGDCLLLEAMGGGFT  316 (324)
Q Consensus       296 ~~g~l~~Gd~vll~~~G~G~s  316 (324)
                      +   -++|++.|+.+.|.=+|
T Consensus       374 R---~~~~~~GLvtangG~lT  391 (502)
T PRK08257        374 R---ANPGRRGLVTANGGYLT  391 (502)
T ss_pred             H---HCCCCEEEEEECCCEEE
T ss_conf             7---18997389980246264


No 171
>PRK07937 lipid-transfer protein; Provisional
Probab=92.69  E-value=0.21  Score=28.69  Aligned_cols=27  Identities=15%  Similarity=0.220  Sum_probs=12.9

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCEEE
Q ss_conf             999999999999974021235443366
Q gi|254780497|r   52 TASLGEAAARDALHHAEMSVDDIDLII   78 (324)
Q Consensus        52 ~~~la~~Aa~~al~~a~~~~~~Id~ii   78 (324)
                      ...+....++.-+++.+.+++++..|.
T Consensus       138 ~~~~~al~ar~~m~~~g~t~E~lA~Va  164 (352)
T PRK07937        138 SVSMAGLQARLGLDAGKWTEEQMAEVA  164 (352)
T ss_pred             HHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf             789999999999985499999999999


No 172
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=92.61  E-value=0.44  Score=26.70  Aligned_cols=10  Identities=10%  Similarity=0.219  Sum_probs=4.6

Q ss_pred             CCCCEEEEEC
Q ss_conf             5443366501
Q gi|254780497|r   72 DDIDLIIVAT   81 (324)
Q Consensus        72 ~~Id~ii~~s   81 (324)
                      .+.|.+|++.
T Consensus       192 G~~D~~iaGG  201 (425)
T PRK06501        192 GETDRALCIA  201 (425)
T ss_pred             CCCCEEEEEE
T ss_conf             8988899933


No 173
>pfam08541 ACP_syn_III_C 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal. This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.
Probab=92.47  E-value=0.055  Score=32.42  Aligned_cols=69  Identities=20%  Similarity=0.356  Sum_probs=41.3

Q ss_pred             HHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCC-CCC----CCCCCCHHHHHHHHHHHHHHCCC---CCC
Q ss_conf             9740212354433665012233458985310011220268644-442----10122003467888998964155---653
Q gi|254780497|r   64 LHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFA-FDM----QAVCSGFVYAVTTADSYIRSGVV---RRV  135 (324)
Q Consensus        64 l~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~-~di----~~~C~~~~~al~~A~~li~~g~~---~~~  135 (324)
                      |+++|++++|||.+++........     -.++++||+++.-. ..+    +.++++-+.+|..+   ++.+..   .++
T Consensus         1 L~~~g~~~~dId~~i~Hq~~~~~~-----~~i~~~lgi~~~k~~~~~~~~GN~~sasip~~L~~~---~~~~~i~~Gd~v   72 (90)
T pfam08541         1 LEKAGLTPDDIDWFVPHQANLRII-----DAVAKRLGLPPEKVVVNLDRYGNTSAASIPLALDEA---VEEGKLKPGDLV   72 (90)
T ss_pred             CCCCCCCHHHCCEEEECCCCHHHH-----HHHHHHHCCCHHHCEEHHHCCCCCCCCHHHHHHHHH---HHCCCCCCCCEE
T ss_conf             944049979999999788888999-----999998197913250324403776202399999999---981999999989


Q ss_pred             EEEEE
Q ss_conf             16763
Q gi|254780497|r  136 MVIGS  140 (324)
Q Consensus       136 Lvv~~  140 (324)
                      |+++.
T Consensus        73 ll~~~   77 (90)
T pfam08541        73 LLVGF   77 (90)
T ss_pred             EEEEE
T ss_conf             99987


No 174
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=92.45  E-value=0.47  Score=26.49  Aligned_cols=92  Identities=18%  Similarity=0.268  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH--HHHCCCH---HHHHHHHHHHHHHCCCCCC
Q ss_conf             7778888987400100012102444441589999997197876733658--6519330---1269999999998068899
Q gi|254780497|r  228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTV--DIHGNTS---AASIPLALAVAVKEGRVKK  302 (324)
Q Consensus       228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~--~~~Gn~~---sas~~~~L~~~~~~g~l~~  302 (324)
                      ...++++|+++|++++|||.|=+|-+--...-.+.+.|++++||+..+-  =-+||=.   .+-+...|-+.+++   +.
T Consensus       285 v~A~~k~L~ragl~~~DiD~~EinEAFA~q~l~~~~~l~id~~kvN~~GGaiAlGHP~GatGarl~~tl~~~L~~---~~  361 (384)
T PRK07661        285 IAAIPKALKLAGLELSDIGLFELNEAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKR---RN  361 (384)
T ss_pred             HHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---HC
T ss_conf             999999999869986677755650667888999999839988883998658874888034479999999999998---19


Q ss_pred             CCEEEE-EEECCCCCEEEEEEE
Q ss_conf             989999-997145014568786
Q gi|254780497|r  303 GDCLLL-EAMGGGFTSGTVLLR  323 (324)
Q Consensus       303 Gd~vll-~~~G~G~s~~a~llr  323 (324)
                      +.+.+. ...|.|.-. +++++
T Consensus       362 ~~~Glas~C~ggG~g~-A~~iE  382 (384)
T PRK07661        362 EQFGIVTMCIGGGMGA-AGVFE  382 (384)
T ss_pred             CCEEEEEECCCCCHHH-EEEEE
T ss_conf             9989999633205223-69999


No 175
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=92.40  E-value=0.38  Score=27.06  Aligned_cols=92  Identities=21%  Similarity=0.302  Sum_probs=59.2

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--HHHHCCCHHH---HHHHHHHHHHHCCCCCC
Q ss_conf             777888898740010001210244444158999999719787673365--8651933012---69999999998068899
Q gi|254780497|r  228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--VDIHGNTSAA---SIPLALAVAVKEGRVKK  302 (324)
Q Consensus       228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--~~~~Gn~~sa---s~~~~L~~~~~~g~l~~  302 (324)
                      ...++++|+++|++++|||.|=+|-+--...-...+.|++++||+..+  .--+||=..+   -+...|-+.++.   +.
T Consensus       298 v~A~~k~l~~agl~~~Did~~EinEAFA~~~l~~~~~l~i~~~~vN~~GGaiA~GHP~GASGarl~~~l~~~L~~---~~  374 (397)
T PRK06954        298 VGAIRKLFEKNGWRAAEVDLYEINEAFAVVTMAAMKEHGLPHEKVNVNGGACALGHPIGASGARILVTLIGALRK---RG  374 (397)
T ss_pred             HHHHHHHHHHCCCCHHHCCEEEEHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---HC
T ss_conf             999999999849996656523540577888999999809994647888638875888220089999999999998---19


Q ss_pred             CCEEEEE-EECCCCCEEEEEEE
Q ss_conf             9899999-97145014568786
Q gi|254780497|r  303 GDCLLLE-AMGGGFTSGTVLLR  323 (324)
Q Consensus       303 Gd~vll~-~~G~G~s~~a~llr  323 (324)
                      |.+.+.. ..|.|.. .+++++
T Consensus       375 g~~gl~s~c~ggG~g-~A~~iE  395 (397)
T PRK06954        375 GKRGVASLCIGGGEA-TAMGIE  395 (397)
T ss_pred             CCEEEEEECCCCCHH-HEEEEE
T ss_conf             988999975531440-469899


No 176
>TIGR02446 FadI acetyl-CoA C-acyltransferase FadI; InterPro: IPR012806    This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (2.3.1.16 from EC) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (IPR012802 from INTERPRO). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in Escherichia coli.; GO: 0008415 acyltransferase activity, 0016740 transferase activity, 0006631 fatty acid metabolic process, 0016042 lipid catabolic process.
Probab=91.88  E-value=0.13  Score=30.02  Aligned_cols=94  Identities=19%  Similarity=0.299  Sum_probs=68.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHH-HHHHHH
Q ss_conf             9889999999999999974021235443366501223345898531001122026-86444421012200346-788899
Q gi|254780497|r   48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYA-VTTADS  125 (324)
Q Consensus        48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~a-l~~A~~  125 (324)
                      .+-...||....+.++|.|+.++|+=|+.++|+....--..|..|..|.=--|+. +.-+|.+.-+|+...++ ..+|.+
T Consensus        27 ~~~~a~dlGkmvv~~ll~r~~~~~~~ieq~v~GqvvqmP~aPniareivlGtGm~~~tdaysv~raCatsfq~~~nvaes  106 (430)
T TIGR02446        27 HGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVTRACATSFQSAVNVAES  106 (430)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEECCCCCCHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             05641344578898777521677789777661001315776402334210267300012024456777778889988877


Q ss_pred             HHHHCCCCCCEEEEECC
Q ss_conf             89641556531676302
Q gi|254780497|r  126 YIRSGVVRRVMVIGSDT  142 (324)
Q Consensus       126 li~~g~~~~~Lvv~~e~  142 (324)
                      ++ +|.++-.+.-++|.
T Consensus       107 ~m-~G~i~~GiaGGads  122 (430)
T TIGR02446       107 IM-AGAIEIGIAGGADS  122 (430)
T ss_pred             HH-HCCEEEEEECCCCC
T ss_conf             75-15301311046654


No 177
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2  has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=91.87  E-value=0.63  Score=25.69  Aligned_cols=19  Identities=0%  Similarity=-0.235  Sum_probs=10.2

Q ss_pred             HHHHHHHHHHHHHHCCCCC
Q ss_conf             7777788889874001000
Q gi|254780497|r  226 KAVELIEKVFDSTHLTIEN  244 (324)
Q Consensus       226 ~~~~~i~~~L~~~gl~~~d  244 (324)
                      .++-.....++..|+.+++
T Consensus       279 aFa~~~l~~~e~lGl~~~g  297 (375)
T cd00829         279 CFTIAELLALEDLGFCEKG  297 (375)
T ss_pred             CCHHHHHHHHHHCCCCCCC
T ss_conf             7669999999980999777


No 178
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=91.87  E-value=0.64  Score=25.63  Aligned_cols=12  Identities=8%  Similarity=0.321  Sum_probs=4.8

Q ss_pred             HHHHHCCCCHHH
Q ss_conf             999971978767
Q gi|254780497|r  260 SIVDKMKIPFDK  271 (324)
Q Consensus       260 ~~~~~lgl~~e~  271 (324)
                      .+.++.++.++.
T Consensus       231 ~~L~~~~l~~~d  242 (323)
T COG0332         231 EVLEKAGLTPED  242 (323)
T ss_pred             HHHHHCCCCHHH
T ss_conf             999984999889


No 179
>PRK06689 consensus
Probab=91.79  E-value=0.38  Score=27.11  Aligned_cols=93  Identities=17%  Similarity=0.192  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH--HHHCCCH---HHHHHHHHHHHHHCCCCC
Q ss_conf             77778888987400100012102444441589999997197876733658--6519330---126999999999806889
Q gi|254780497|r  227 AVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTV--DIHGNTS---AASIPLALAVAVKEGRVK  301 (324)
Q Consensus       227 ~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~--~~~Gn~~---sas~~~~L~~~~~~g~l~  301 (324)
                      -...++++|+++|++++|||.|=+|-+-....-.+.+.|++++||+..+-  =-+||=.   .+-+...|-+.++.   +
T Consensus       291 Pv~A~~k~L~ragl~~~Did~~EinEAFA~q~l~~~~~lgid~~kvN~~GGaiAlGHP~GaTGarl~~~l~~~L~~---~  367 (391)
T PRK06689        291 PAPAIRKGLEKVDWSLEDADLLEINEAFAAQYLAVEKELGLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELKR---R  367 (391)
T ss_pred             HHHHHHHHHHHCCCCHHHCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---H
T ss_conf             9999999999859986458889961566889999999858979888998668874888121479999999999998---0


Q ss_pred             CCCEEEE-EEECCCCCEEEEEEE
Q ss_conf             9989999-997145014568786
Q gi|254780497|r  302 KGDCLLL-EAMGGGFTSGTVLLR  323 (324)
Q Consensus       302 ~Gd~vll-~~~G~G~s~~a~llr  323 (324)
                      .+.+.+. ...|.|.- .+++++
T Consensus       368 ~~~~gl~t~C~ggG~G-~A~~iE  389 (391)
T PRK06689        368 GLEKGIASLCVGGGIG-VALFIE  389 (391)
T ss_pred             CCCEEEEEECCCCCHH-HEEEEE
T ss_conf             9998999964302321-516686


No 180
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=91.69  E-value=0.71  Score=25.37  Aligned_cols=43  Identities=16%  Similarity=0.191  Sum_probs=35.4

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH
Q ss_conf             7778888987400100012102444441589999997197876
Q gi|254780497|r  228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD  270 (324)
Q Consensus       228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e  270 (324)
                      ...++++|+++|++++|||.+=+|-+--..--...+.||+.++
T Consensus       272 ~~A~~~al~~aGl~~~Did~~Ei~eaFa~~~l~~~e~lg~~~~  314 (393)
T cd00826         272 IEAARKALEKAGLGIGDLDLIEAHDAFAANACATNEALGLCPE  314 (393)
T ss_pred             HHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCC
T ss_conf             9999999998299800166456324234999999998098912


No 181
>PRK07025 consensus
Probab=91.09  E-value=0.3  Score=27.78  Aligned_cols=92  Identities=18%  Similarity=0.217  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--HHHHCCCHHHH---HHHHHHHHHHCCCCCC
Q ss_conf             777888898740010001210244444158999999719787673365--86519330126---9999999998068899
Q gi|254780497|r  228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--VDIHGNTSAAS---IPLALAVAVKEGRVKK  302 (324)
Q Consensus       228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--~~~~Gn~~sas---~~~~L~~~~~~g~l~~  302 (324)
                      ...++++|+++|++++|||.|=+|-+--...-...+.||++++|+..+  .--+||=..++   +...|-+.++.   +.
T Consensus       294 v~A~~k~l~~agl~~~Did~~EinEAFA~~~l~~~~~lg~d~~~vN~~GGaiA~GHP~GATGar~~~~l~~~L~~---~~  370 (393)
T PRK07025        294 VPASRRCLERAGWTVGDLDLMEINEAFAAQALAVHKQMGWDTSKVNVNGGAIAIGHPIGASGCRILVTLLHEMQK---RD  370 (393)
T ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---CC
T ss_conf             999999999859983346602013677888999999848994657988548872898031289999999999987---39


Q ss_pred             CCEEEEE-EECCCCCEEEEEEE
Q ss_conf             9899999-97145014568786
Q gi|254780497|r  303 GDCLLLE-AMGGGFTSGTVLLR  323 (324)
Q Consensus       303 Gd~vll~-~~G~G~s~~a~llr  323 (324)
                      |.+.+.. ..|.|. -.+++++
T Consensus       371 ~~~gl~~~C~ggG~-g~A~~iE  391 (393)
T PRK07025        371 AKRGLASLCIGGGM-GVALAVE  391 (393)
T ss_pred             CCEEEEEECCCCCE-EEEEEEE
T ss_conf             98899997332320-2799996


No 182
>PRK06158 thiolase; Provisional
Probab=90.50  E-value=0.24  Score=28.39  Aligned_cols=13  Identities=15%  Similarity=0.238  Sum_probs=8.8

Q ss_pred             EEEEEEEEEECCCC
Q ss_conf             26999999964984
Q gi|254780497|r    3 RSTVRGIGLSLPRR   16 (324)
Q Consensus         3 ~~~I~~~g~ylP~~   16 (324)
                      +|.|.|+|.. |-.
T Consensus         9 rvAIvGvG~t-~fg   21 (384)
T PRK06158          9 RTAIVGAATA-GLG   21 (384)
T ss_pred             CEEEEEEEEC-CCC
T ss_conf             3899975551-350


No 183
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=90.37  E-value=0.8  Score=25.02  Aligned_cols=13  Identities=38%  Similarity=0.358  Sum_probs=8.4

Q ss_pred             EEEEEEEEEECCC
Q ss_conf             2699999996498
Q gi|254780497|r    3 RSTVRGIGLSLPR   15 (324)
Q Consensus         3 ~~~I~~~g~ylP~   15 (324)
                      +|.|.|+|..=..
T Consensus         2 ~vaIvG~g~t~~g   14 (385)
T PRK12578          2 RVAVIGVGNSKFG   14 (385)
T ss_pred             CEEEEEEEEEECC
T ss_conf             6999997662241


No 184
>PRK09051 beta-ketothiolase; Provisional
Probab=90.31  E-value=0.52  Score=26.20  Aligned_cols=92  Identities=17%  Similarity=0.224  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--HHHHCCCHH---HHHHHHHHHHHHCCCCC
Q ss_conf             7777888898740010001210244444158999999719787673365--865193301---26999999999806889
Q gi|254780497|r  227 AVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--VDIHGNTSA---ASIPLALAVAVKEGRVK  301 (324)
Q Consensus       227 ~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--~~~~Gn~~s---as~~~~L~~~~~~g~l~  301 (324)
                      -...++++|+++|++++|||.|=+|-+--...-...+.|++++||+..+  .=-+||=..   +-+.+.|-+.++.   +
T Consensus       294 p~~A~~~~L~ragl~~~Did~~EinEAFA~q~l~~~~~l~~d~~kvN~~GGaiAlGHP~GaTGar~~~~l~~~L~~---~  370 (394)
T PRK09051        294 PVPATQKALERAGLTVDDLDVIEANEAFAAQACAVTRELGLDPAKVNPNGSGISLGHPVGATGAIITVKALYELQR---I  370 (394)
T ss_pred             HHHHHHHHHHHCCCCHHHCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---C
T ss_conf             9999999999839987779888851465999999998709987874998658863988023489999999999987---1


Q ss_pred             CCCEEEE-EEECCCCCEEEEE
Q ss_conf             9989999-9971450145687
Q gi|254780497|r  302 KGDCLLL-EAMGGGFTSGTVL  321 (324)
Q Consensus       302 ~Gd~vll-~~~G~G~s~~a~l  321 (324)
                      .|.+.+. ...|.|.-...++
T Consensus       371 ~~~~Gl~t~C~ggG~g~A~li  391 (394)
T PRK09051        371 GGRYALVTMCIGGGQGIAAIF  391 (394)
T ss_pred             CCCEEEEEECCCCCCEEEEEE
T ss_conf             999899997442250768999


No 185
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=89.63  E-value=0.62  Score=25.72  Aligned_cols=90  Identities=22%  Similarity=0.206  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCC---CHHHHHHH--HHHHCC----CHHHHHHHHHHHHHHCC
Q ss_conf             7778888987400100012102444441589999997197---87673365--865193----30126999999999806
Q gi|254780497|r  228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKI---PFDKVIVT--VDIHGN----TSAASIPLALAVAVKEG  298 (324)
Q Consensus       228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl---~~e~~~~~--~~~~Gn----~~sas~~~~L~~~~~~g  298 (324)
                      ...++++|+++||+++|||.|=+|-+--...-...+.||+   ++||+..+  .--+||    +| +-+.+.|-+.++. 
T Consensus       285 ~~A~~~~L~~agl~~~Did~~EinEAFA~q~l~~~~~lg~~~~~~~kvN~~GGaiA~GHP~GATG-arl~~~l~~~L~~-  362 (387)
T PRK08947        285 VPATQKALKRAGLSIADIDVFELNEAFAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSG-ARISTTLLNLMER-  362 (387)
T ss_pred             HHHHHHHHHHCCCCHHHCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCH-HHHHHHHHHHHHH-
T ss_conf             99999999984998655784221256687799999985998898335789965887388811028-9999999999998-


Q ss_pred             CCCCCCEEE-EEEECCCCCEEEEE
Q ss_conf             889998999-99971450145687
Q gi|254780497|r  299 RVKKGDCLL-LEAMGGGFTSGTVL  321 (324)
Q Consensus       299 ~l~~Gd~vl-l~~~G~G~s~~a~l  321 (324)
                        +.+.+.+ -...|.|.-...++
T Consensus       363 --~~~~~gl~s~c~ggG~g~A~~i  384 (387)
T PRK08947        363 --KDAQFGLATMCIGLGQGIATVF  384 (387)
T ss_pred             --HCCCEEEEEECCCCCCEEEEEE
T ss_conf             --1999999996232141307999


No 186
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=89.58  E-value=0.75  Score=25.18  Aligned_cols=23  Identities=13%  Similarity=0.254  Sum_probs=13.1

Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             77888898740010001210244
Q gi|254780497|r  229 ELIEKVFDSTHLTIENIDWFVPH  251 (324)
Q Consensus       229 ~~i~~~L~~~gl~~~did~~~~H  251 (324)
                      .+++.+.++.++.++.+-.++++
T Consensus       273 riie~i~k~Lgl~~ek~~~~~~~  295 (353)
T PRK12880        273 YLVDCIKEELKLNDDKVPNFIME  295 (353)
T ss_pred             HHHHHHHHHCCCCHHHHHHHHHH
T ss_conf             99999999809897870300555


No 187
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=89.27  E-value=0.63  Score=25.67  Aligned_cols=96  Identities=20%  Similarity=0.179  Sum_probs=60.2

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--HHHHCCCHHHHHHHHHHHHHHCCCCCCCCE
Q ss_conf             777888898740010001210244444158999999719787673365--865193301269999999998068899989
Q gi|254780497|r  228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--VDIHGNTSAASIPLALAVAVKEGRVKKGDC  305 (324)
Q Consensus       228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~  305 (324)
                      ...++++|+++|++++|||.+=+|-+--..--...+.||++++++...  +--+||=..++=...+.+++.+-+-+.|.+
T Consensus       288 ~~A~~~al~~agl~~~Did~~EiheaFa~~~l~~~~~lg~~~~~vN~~GG~ia~GHP~GATG~~~~~~l~~~L~~~~g~~  367 (386)
T cd00751         288 VPAIPKALKRAGLTLDDIDLIEINEAFAAQALACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHELKRRGGRY  367 (386)
T ss_pred             HHHHHHHHHHCCCCHHHCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCE
T ss_conf             99999999983998444884351056687899999982987766788855986099802158999999999998838988


Q ss_pred             EEEEEECCCCCEEEEEEE
Q ss_conf             999997145014568786
Q gi|254780497|r  306 LLLEAMGGGFTSGTVLLR  323 (324)
Q Consensus       306 vll~~~G~G~s~~a~llr  323 (324)
                      .+...-++|=.-.+++++
T Consensus       368 gl~s~c~~gG~g~a~~ie  385 (386)
T cd00751         368 GLATMCIGGGQGAAMVIE  385 (386)
T ss_pred             EEEEECCCCCEEEEEEEE
T ss_conf             999973345506799997


No 188
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=89.05  E-value=0.71  Score=25.35  Aligned_cols=84  Identities=14%  Similarity=0.122  Sum_probs=32.2

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCHH-HHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf             88889874001000121024444415-89999997197876733658651933012699999999980688999899999
Q gi|254780497|r  231 IEKVFDSTHLTIENIDWFVPHQANWR-IINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLE  309 (324)
Q Consensus       231 i~~~L~~~gl~~~did~~~~Hq~~~~-~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~  309 (324)
                      +.+++...++...-++-.+-|-..-. +.+.+.-.|-+....++-    .-|+-..++-+.|+......+-.+-.+++.-
T Consensus       311 i~~~fg~~~~pv~S~K~~iGH~~~AaG~~~~i~~ll~l~~g~ipp----t~n~~~~~p~~~l~~v~~~~~~~~~~~al~n  386 (399)
T cd00832         311 LAAVFGPRGVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIPP----TVNVTDVPPAYGLDLVTGRPRPAALRTALVL  386 (399)
T ss_pred             HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf             999966999878995422110699999999999999983596198----9998999988885237899878998999994


Q ss_pred             EEC-CCCCEE
Q ss_conf             971-450145
Q gi|254780497|r  310 AMG-GGFTSG  318 (324)
Q Consensus       310 ~~G-~G~s~~  318 (324)
                      +|| .|....
T Consensus       387 sfGfGG~Na~  396 (399)
T cd00832         387 ARGRGGFNSA  396 (399)
T ss_pred             CCCCCCEEEE
T ss_conf             4056803268


No 189
>PRK08371 consensus
Probab=88.20  E-value=0.27  Score=28.08  Aligned_cols=19  Identities=16%  Similarity=0.212  Sum_probs=8.4

Q ss_pred             HHHHHHHHHCCCCCCCCEE
Q ss_conf             9999997402123544336
Q gi|254780497|r   59 AARDALHHAEMSVDDIDLI   77 (324)
Q Consensus        59 Aa~~al~~a~~~~~~Id~i   77 (324)
                      .+++-+++.|++.+|++.+
T Consensus       148 ~a~~~~~~yg~t~e~~a~v  166 (388)
T PRK08371        148 IMRLYMNTYGYTEEDLALF  166 (388)
T ss_pred             HHHHHHHHHCCCHHHHHHH
T ss_conf             9999999958998883799


No 190
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=87.53  E-value=0.26  Score=28.14  Aligned_cols=91  Identities=20%  Similarity=0.239  Sum_probs=49.3

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCHHH----HH------HHHHHCCC-------CHHHHHHHH--HHHCCCH---HH
Q ss_conf             777888898740010001210244444158----99------99997197-------876733658--6519330---12
Q gi|254780497|r  228 VELIEKVFDSTHLTIENIDWFVPHQANWRI----IN------SIVDKMKI-------PFDKVIVTV--DIHGNTS---AA  285 (324)
Q Consensus       228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~----~~------~~~~~lgl-------~~e~~~~~~--~~~Gn~~---sa  285 (324)
                      ...++++|+++||+++|||.|=+|-+--..    ++      ...+.||+       ++||+..+-  =-+||=.   .+
T Consensus       313 v~A~~~~L~ragl~~~Did~~EinEAFAaq~la~~~~~~~~~~~~~~lgl~~~~~~id~~kvN~~GGaiAlGHP~GaSGa  392 (428)
T PRK09268        313 TYAVPRLLARNGLTLQDFDFYEIHEAFASQVLATLKAWESEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGG  392 (428)
T ss_pred             HHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHCCCCCCCHH
T ss_conf             99999999985999798479987466788999998864004667886276532356877654888538874888033489


Q ss_pred             HHHHHHHHHHHCCCCCCCCEEEE-EEECCCCCEEEEEE
Q ss_conf             69999999998068899989999-99714501456878
Q gi|254780497|r  286 SIPLALAVAVKEGRVKKGDCLLL-EAMGGGFTSGTVLL  322 (324)
Q Consensus       286 s~~~~L~~~~~~g~l~~Gd~vll-~~~G~G~s~~a~ll  322 (324)
                      =+.+.|.+.++.   +.+.+.+. ...|.|.-. ++++
T Consensus       393 riv~~l~~~L~~---~~~~~Glat~C~gGG~g~-A~li  426 (428)
T PRK09268        393 RIVATLAKLLAE---KGSGRGLISICAAGGQGV-TAIL  426 (428)
T ss_pred             HHHHHHHHHHHH---HCCCEEEEEECCCCCEEE-EEEE
T ss_conf             999999999998---399989998723134077-9999


No 191
>PRK08256 lipid-transfer protein; Provisional
Probab=87.46  E-value=0.38  Score=27.11  Aligned_cols=34  Identities=15%  Similarity=0.238  Sum_probs=17.4

Q ss_pred             CEEEEEEEEEEC---CCCEECHHHHHH--------HHCCCHHHHH
Q ss_conf             226999999964---984117889998--------8099987811
Q gi|254780497|r    2 IRSTVRGIGLSL---PRRVLSNSDLES--------IVDTSDGWIK   35 (324)
Q Consensus         2 ~~~~I~~~g~yl---P~~~v~~~el~~--------~~~~~~~~i~   35 (324)
                      |+|.|.|+|.--   |..-.+..+|..        ..+++++.|.
T Consensus         1 nkV~IvGvg~T~f~k~~~~~~~~~L~~eA~~~AL~dAGi~~~~ID   45 (391)
T PRK08256          1 NKVFVAGVGMTPFEKPGASWDYPDMAAEAGRAALADAGIDYDEVQ   45 (391)
T ss_pred             CEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCC
T ss_conf             909999742045368999999999999999999998298989989


No 192
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=87.18  E-value=0.51  Score=26.26  Aligned_cols=20  Identities=30%  Similarity=0.363  Sum_probs=12.1

Q ss_pred             EEEEEEEEEECCCCEE---CHHHH
Q ss_conf             2699999996498411---78899
Q gi|254780497|r    3 RSTVRGIGLSLPRRVL---SNSDL   23 (324)
Q Consensus         3 ~~~I~~~g~ylP~~~v---~~~el   23 (324)
                      +|.|.|+|. .|-.+.   +..||
T Consensus        11 ~VaIvG~G~-T~f~r~~~~s~~eL   33 (393)
T PRK06065         11 RVAVIGAGM-TLFRRRMLETPQEL   33 (393)
T ss_pred             CEEEEEEEE-ECCCCCCCCCHHHH
T ss_conf             889998657-01267899999999


No 193
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=86.97  E-value=1.7  Score=22.97  Aligned_cols=31  Identities=13%  Similarity=0.113  Sum_probs=15.0

Q ss_pred             CCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHH
Q ss_conf             8985310011220268-6444421012200346
Q gi|254780497|r   88 FPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYA  119 (324)
Q Consensus        88 ~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~a  119 (324)
                      .|..-+++.+.|.+++ ..+++|.+| +|+..|
T Consensus        57 ~P~~~a~ml~~L~~~~~~~VLeIGtG-sGY~tA   88 (205)
T PRK13944         57 APHMVAMMCELIEPRPGMKILEVGTG-SGYQAA   88 (205)
T ss_pred             HHHHHHHHHHHHCCCCCCEEEEECCC-CCHHHH
T ss_conf             79999999997068999989997898-519999


No 194
>pfam01135 PCMT Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT).
Probab=85.94  E-value=2  Score=22.44  Aligned_cols=25  Identities=12%  Similarity=0.094  Sum_probs=11.8

Q ss_pred             CCCCCCCHHHHHHCCC-CCCCCCCCC
Q ss_conf             8985310011220268-644442101
Q gi|254780497|r   88 FPSTAVNIQNRLGMKR-GFAFDMQAV  112 (324)
Q Consensus        88 ~p~~a~~i~~~LGl~~-~~~~di~~~  112 (324)
                      .|.+.+++.+.|.+++ ..+++|.+|
T Consensus        58 ~P~~~a~ml~~L~l~~g~~VLeIGtG   83 (205)
T pfam01135        58 APHMHAMMLELLELKPGMRVLEIGSG   83 (205)
T ss_pred             HHHHHHHHHHHCCCCCCCEEEEECCC
T ss_conf             38999999997078999989996699


No 195
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=85.88  E-value=2.1  Score=22.38  Aligned_cols=32  Identities=16%  Similarity=0.139  Sum_probs=15.8

Q ss_pred             CCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHH
Q ss_conf             8985310011220268-64444210122003467
Q gi|254780497|r   88 FPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAV  120 (324)
Q Consensus        88 ~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al  120 (324)
                      .|...+++.+.|.+++ ..+++|.+| +|+..|+
T Consensus        61 ~P~~~a~ml~~L~l~~~~~VLeIGtG-sGY~tAl   93 (214)
T PRK13942         61 AIHMVAIMCELLDLDEGQKVLEIGTG-SGYHAAV   93 (214)
T ss_pred             HHHHHHHHHHHHCCCCCCEEEEECCC-CCHHHHH
T ss_conf             49999999997279999979996799-5299999


No 196
>TIGR02470 sucr_synth sucrose synthase; InterPro: IPR012820    This entry represents sucrose synthase an enzyme that despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyses the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.; GO: 0016157 sucrose synthase activity.
Probab=85.78  E-value=0.42  Score=26.83  Aligned_cols=124  Identities=19%  Similarity=0.210  Sum_probs=84.8

Q ss_pred             EEEEEEEECCCC--EECHHHHHHHHCCCHHHHHH-----CCCCCEEEEECCCC---CHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             999999964984--11788999880999878110-----24751889828988---999999999999997402123544
Q gi|254780497|r    5 TVRGIGLSLPRR--VLSNSDLESIVDTSDGWIKR-----RVGISRRHIAGKDE---TTASLGEAAARDALHHAEMSVDDI   74 (324)
Q Consensus         5 ~I~~~g~ylP~~--~v~~~el~~~~~~~~~~i~~-----~~GI~~R~~~~~~e---~~~~la~~Aa~~al~~a~~~~~~I   74 (324)
                      +|.=+=-=+|+-  .-.|+.||+..|....||.+     ..|+-.|.|...=|   ..-+-|..|.++++..-+-.|   
T Consensus       316 kIlIvTRLiPdA~GT~CnqRLEKv~Gt~~~~ILRVPFr~~nG~~~~~WISRFeiWPYLE~FA~D~~~e~~~el~g~P---  392 (790)
T TIGR02470       316 KILIVTRLIPDAEGTTCNQRLEKVSGTEHAHILRVPFRTENGIILRKWISRFEIWPYLETFAEDAEKEILAELQGKP---  392 (790)
T ss_pred             EEEEEECCCCCCCCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC---
T ss_conf             28998501768988605724520127985316421664347730036633012472045668999999999846899---


Q ss_pred             CEEEEECCCCCCCCCCCCCCHHHHHHCCCCC-----------CCCCCC--CCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf             3366501223345898531001122026864-----------444210--122003467888998964155653
Q gi|254780497|r   75 DLIIVATSTPDQTFPSTAVNIQNRLGMKRGF-----------AFDMQA--VCSGFVYAVTTADSYIRSGVVRRV  135 (324)
Q Consensus        75 d~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~-----------~~di~~--~C~~~~~al~~A~~li~~g~~~~~  135 (324)
                      |+||-. -|-.++   .|+.++++||.++|.           -=||..  .=.=.-..+|--++||+.+..+-+
T Consensus       393 DLIIGN-YSDGNL---VA~LLA~kLgVTQC~IAHALEKtKY~~Sd~yW~~~e~kYHFS~QFTADLIAMN~aDFI  462 (790)
T TIGR02470       393 DLIIGN-YSDGNL---VASLLARKLGVTQCTIAHALEKTKYPDSDIYWQELEDKYHFSCQFTADLIAMNAADFI  462 (790)
T ss_pred             CEEEEC-CCCHHH---HHHHHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCE
T ss_conf             706732-563589---9999985336222203331334367664540420257656430578999964158965


No 197
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase; InterPro: IPR012793    Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.; GO: 0016747 transferase activity transferring groups other than amino-acyl groups, 0019619 protocatechuate catabolic process.
Probab=84.84  E-value=0.75  Score=25.20  Aligned_cols=95  Identities=17%  Similarity=0.245  Sum_probs=64.6

Q ss_pred             CHHHHHHHHHHHHHHHH-CCCCCCCCEEEEECCCCCCCCCCCCCCHHHHH-HCCCC-CCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             99999999999999740-21235443366501223345898531001122-02686-44442101220034678889989
Q gi|254780497|r   51 TTASLGEAAARDALHHA-EMSVDDIDLIIVATSTPDQTFPSTAVNIQNRL-GMKRG-FAFDMQAVCSGFVYAVTTADSYI  127 (324)
Q Consensus        51 ~~~~la~~Aa~~al~~a-~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~L-Gl~~~-~~~di~~~C~~~~~al~~A~~li  127 (324)
                      ..-||++--.+.++.+. .++...||-|++++...---.--..+++...| |++.. ....++--|.+.+.++..+..-|
T Consensus        24 rad~l~a~P~~~l~~~~~~~~~~~~d~v~~G~anqaGednrnvarm~~llaGlP~~v~~~t~nrlC~s~lda~~~~~ra~  103 (400)
T TIGR02430        24 RADDLAAVPIKALLARNPSLDAAAIDDVILGCANQAGEDNRNVARMAALLAGLPVSVPGTTVNRLCGSGLDAIGLAARAI  103 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             10002233699998532202656531443123211351035799999997068641101456665421378999988876


Q ss_pred             HHCCCCCCEEEEECCCCC
Q ss_conf             641556531676302243
Q gi|254780497|r  128 RSGVVRRVMVIGSDTFSR  145 (324)
Q Consensus       128 ~~g~~~~~Lvv~~e~~S~  145 (324)
                      ++|..+-++.-+.|.+|+
T Consensus       104 ~~G~~~l~iaGGvesmsr  121 (400)
T TIGR02430       104 KAGEADLVIAGGVESMSR  121 (400)
T ss_pred             HCCCCCEEEECCCHHHCC
T ss_conf             327643577647211203


No 198
>TIGR02482 PFKA_ATP 6-phosphofructokinase; InterPro: IPR012828    6-phosphofructokinase (2.7.1.11 from EC) catalyses the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This entry contains bacterial ATP-dependent 6-phosphofructokinases, which lack a beta-hairpin loop present in IPR012829 from INTERPRO family members. IPR012829 from INTERPRO contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. IPR011183 from INTERPRO represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (2.7.1.90 from EC).; GO: 0003872 6-phosphofructokinase activity, 0005524 ATP binding, 0006002 fructose 6-phosphate metabolic process, 0006096 glycolysis.
Probab=84.83  E-value=2.1  Score=22.39  Aligned_cols=13  Identities=8%  Similarity=0.174  Sum_probs=7.3

Q ss_pred             CCCCCCEEEEEEE
Q ss_conf             8899989999997
Q gi|254780497|r  299 RVKKGDCLLLEAM  311 (324)
Q Consensus       299 ~l~~Gd~vll~~~  311 (324)
                      .|.+|+..+|+++
T Consensus       276 ~L~~g~~gvmig~  288 (302)
T TIGR02482       276 LLLEGKSGVMIGL  288 (302)
T ss_pred             HHHCCCCCEEEEE
T ss_conf             9863982036885


No 199
>pfam03377 Avirulence Xanthomonas avirulence protein, Avr/PthA.
Probab=84.20  E-value=3.3  Score=21.13  Aligned_cols=45  Identities=11%  Similarity=0.209  Sum_probs=29.2

Q ss_pred             HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHC-------CCCHHHHHHHHH
Q ss_conf             889874001000121024444415899999971-------978767336586
Q gi|254780497|r  233 KVFDSTHLTIENIDWFVPHQANWRIINSIVDKM-------KIPFDKVIVTVD  277 (324)
Q Consensus       233 ~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~l-------gl~~e~~~~~~~  277 (324)
                      ..+...|++++||-.+.-|-+++..++.+.+.+       +++++++...-.
T Consensus       203 ~l~~~~gL~~~qVVaIASh~GgkqALe~v~~~l~~L~~~~~Ls~~qvvaiAs  254 (289)
T pfam03377       203 VLCQAHGLTPDQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPDQVVAIAS  254 (289)
T ss_pred             HHHHHCCCCHHHEEHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEHHH
T ss_conf             9875149998891100216872789999998868765350289878420022


No 200
>COG0013 AlaS Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=83.28  E-value=1.5  Score=23.27  Aligned_cols=13  Identities=31%  Similarity=0.465  Sum_probs=6.6

Q ss_pred             CCCCEEEEEEECC
Q ss_conf             9998999999714
Q gi|254780497|r  301 KKGDCLLLEAMGG  313 (324)
Q Consensus       301 ~~Gd~vll~~~G~  313 (324)
                      +.|+.|=.+.+|.
T Consensus       651 kY~~~VRVV~ig~  663 (879)
T COG0013         651 KYGDEVRVVEIGD  663 (879)
T ss_pred             CCCCEEEEEEECC
T ss_conf             6798689999899


No 201
>PRK13410 molecular chaperone DnaK; Provisional
Probab=82.48  E-value=2.2  Score=22.17  Aligned_cols=46  Identities=13%  Similarity=0.114  Sum_probs=26.8

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH---HHHHHHHHCCCC
Q ss_conf             5777777788889874001000121024444415---899999971978
Q gi|254780497|r  223 AVEKAVELIEKVFDSTHLTIENIDWFVPHQANWR---IINSIVDKMKIP  268 (324)
Q Consensus       223 ~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~---~~~~~~~~lgl~  268 (324)
                      .+....+.++++|+.++++++|||.+++-=++-+   +.+.+.+.+|-.
T Consensus       307 L~~Rt~~pv~~aL~dAgl~~~dId~VILVGGSTRIP~Vq~~V~e~FGke  355 (719)
T PRK13410        307 LVSRLRRPVKRALKDAGLSPVQIDEVVLVGGSTRMPMVKQLVRSLIDRE  355 (719)
T ss_pred             HHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf             9999999999999983899414139999788255488999999984999


No 202
>PRK08197 threonine synthase; Validated
Probab=79.51  E-value=4.8  Score=20.05  Aligned_cols=64  Identities=14%  Similarity=0.243  Sum_probs=44.8

Q ss_pred             HHHHHHHHHC----CCCHHHHHHH---HHH-HC---CCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEE
Q ss_conf             5899999971----9787673365---865-19---330126999999999806889998999999714501456
Q gi|254780497|r  256 RIINSIVDKM----KIPFDKVIVT---VDI-HG---NTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFTSGT  319 (324)
Q Consensus       256 ~~~~~~~~~l----gl~~e~~~~~---~~~-~G---n~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~a  319 (324)
                      .+++.+.+.=    -++.+.+..-   +.+ -|   -..|+..+.++.++.++|.++++++|+++-.|.|+..--
T Consensus       310 ~~l~av~~s~G~~v~VsD~Ei~~A~~~La~~eGi~~EpasA~alAgl~kl~e~G~i~~~~~VV~~lTG~GlKd~d  384 (402)
T PRK08197        310 LVLDAVRESGGCAIAVDDEAILAALSELAREEGLFACPEGAAALAAAKQLRESGWLKSGERVVLFNTGTGLKYPD  384 (402)
T ss_pred             HHHHHHHHHCCEEEEECHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHH
T ss_conf             999999986998999899999999999998559277736999999999999829999999699990888667777


No 203
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=79.42  E-value=3.6  Score=20.84  Aligned_cols=50  Identities=16%  Similarity=0.202  Sum_probs=33.5

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH---HHHHHHHHCCCCHHH
Q ss_conf             55777777788889874001000121024444415---899999971978767
Q gi|254780497|r  222 YAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWR---IINSIVDKMKIPFDK  271 (324)
Q Consensus       222 ~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~---~~~~~~~~lgl~~e~  271 (324)
                      .........++++|++++++++|||.+++-=++-+   +.+.+.+.+|-++.+
T Consensus       306 ~l~~r~~~~v~~aL~~A~l~~~dId~ViLVGGsTRiP~Vq~~v~~~Fgk~~~~  358 (631)
T PRK00290        306 DLVERTIEPCRQALKDAGLSVSDIDEVILVGGSTRMPAVQELVKEFFGKEPNK  358 (631)
T ss_pred             HHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCC
T ss_conf             99999999999999980898222159999178245679999999996889777


No 204
>cd01451 vWA_Magnesium_chelatase Magnesium chelatase: Mg-chelatase catalyses the insertion of Mg into protoporphyrin IX (Proto). In chlorophyll biosynthesis, insertion of Mg2+ into protoporphyrin IX is catalysed by magnesium chelatase in an ATP-dependent reaction. Magnesium chelatase is a three sub-unit (BchI, BchD and BchH) enzyme with a novel arrangement of domains: the C-terminal helical domain is located behind the nucleotide binding site. The BchD domain contains a AAA domain at its N-terminus and a VWA domain at its C-terminus. The VWA domain has been speculated to be involved in mediating protein-protein interactions.
Probab=79.11  E-value=4.9  Score=19.97  Aligned_cols=73  Identities=16%  Similarity=0.176  Sum_probs=46.8

Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCC--HHHHHHCCCCCCCCCC-CCCCCHHHHHHHHHHH
Q ss_conf             899999999999999740212354433665012233458985310--0112202686444421-0122003467888998
Q gi|254780497|r   50 ETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVN--IQNRLGMKRGFAFDMQ-AVCSGFVYAVTTADSY  126 (324)
Q Consensus        50 e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~--i~~~LGl~~~~~~di~-~~C~~~~~al~~A~~l  126 (324)
                      +...+.+..|+..+|.++-...+.|.+|.|.....+...|++-..  +.+.|  ..     +. +|+...-.+|..|..+
T Consensus        16 ~~rl~~aK~a~~~ll~d~~~~~D~v~lv~F~g~~a~~~lppT~~~~~~~~~l--~~-----L~~gG~T~l~~gL~~a~~~   88 (178)
T cd01451          16 RHRMAAAKGAVLSLLRDAYQRRDKVALIAFRGTEAEVLLPPTRSVELAKRRL--AR-----LPTGGGTPLAAGLLAAYEL   88 (178)
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEECCCCCCHHHHHHHH--HC-----CCCCCCCCHHHHHHHHHHH
T ss_conf             5679999999999999743467889999975975558568876579999987--21-----6788985199999999999


Q ss_pred             HHH
Q ss_conf             964
Q gi|254780497|r  127 IRS  129 (324)
Q Consensus       127 i~~  129 (324)
                      ++.
T Consensus        89 ~~~   91 (178)
T cd01451          89 AAE   91 (178)
T ss_pred             HHH
T ss_conf             998


No 205
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=77.16  E-value=2.4  Score=21.97  Aligned_cols=33  Identities=24%  Similarity=0.375  Sum_probs=18.0

Q ss_pred             CCCCCCCCHHHHHHCCCC-CCCCCCCCCCCHHHHH
Q ss_conf             589853100112202686-4444210122003467
Q gi|254780497|r   87 TFPSTAVNIQNRLGMKRG-FAFDMQAVCSGFVYAV  120 (324)
Q Consensus        87 ~~p~~a~~i~~~LGl~~~-~~~di~~~C~~~~~al  120 (324)
                      ..|.+.+++.+.|.+++. .+++|.+| +|+..|+
T Consensus        62 s~P~~~A~ml~~L~l~~~~~VLeIGtG-sGY~tAl   95 (213)
T PRK00312         62 SQPYMVARMTELLELKPGDRVLEIGTG-SGYQAAV   95 (213)
T ss_pred             CHHHHHHHHHHHHCCCCCCEEEEECCC-CCHHHHH
T ss_conf             679999999998436899759996598-6099999


No 206
>pfam01295 Adenylate_cycl Adenylate cyclase, class-I.
Probab=76.83  E-value=3  Score=21.32  Aligned_cols=29  Identities=14%  Similarity=0.156  Sum_probs=12.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCE
Q ss_conf             898899999999999999740212354433
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDL   76 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~   76 (324)
                      ...-++-||.+- .||+-..--..|..|++
T Consensus       413 ~~si~~~Di~iL-~RKLyaAFE~~pGKV~~  441 (830)
T pfam01295       413 SESISPQDIGIL-TRKLYTAFEELPGKVTL  441 (830)
T ss_pred             CCCCCHHHHHHH-HHHHHHHHHCCCCCEEE
T ss_conf             655698887699-99999998527880446


No 207
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=76.00  E-value=2.7  Score=21.62  Aligned_cols=22  Identities=14%  Similarity=0.249  Sum_probs=11.4

Q ss_pred             HHHHHHHHCCCCCCEEEEECCC
Q ss_conf             8899896415565316763022
Q gi|254780497|r  122 TADSYIRSGVVRRVMVIGSDTF  143 (324)
Q Consensus       122 ~A~~li~~g~~~~~Lvv~~e~~  143 (324)
                      .|...++.-.+.++.++.+|-.
T Consensus       115 ~Ar~~L~~lG~~NV~vv~GDG~  136 (317)
T PRK13943        115 IAKRNVERLGIENVIFVCGDGY  136 (317)
T ss_pred             HHHHHHHHCCCCCEEEEECCCC
T ss_conf             9999999779986499979988


No 208
>PRK03673 competence damage-inducible protein A; Provisional
Probab=75.98  E-value=6.1  Score=19.41  Aligned_cols=83  Identities=24%  Similarity=0.349  Sum_probs=46.4

Q ss_pred             CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHH---CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE
Q ss_conf             922699999996498411788999880999878110---24751889828988999999999999997402123544336
Q gi|254780497|r    1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKR---RVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLI   77 (324)
Q Consensus         1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~---~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~i   77 (324)
                      ||++-|.++|.-|=.-.+        .+.+..||.+   ..||+-.+..--+.+.-++ .++.+.+++++       |+|
T Consensus         1 MMkaeIIsiG~ElL~G~i--------~dTNa~~la~~L~~~G~~v~~~~tVgD~~~~i-~~~l~~a~~r~-------DlV   64 (396)
T PRK03673          1 MLRVEMLSTGDEVLHGQI--------VDTNAAWLADFFFHQGLPLSRRNTVGDNLDAL-VAILRERSQHA-------DVL   64 (396)
T ss_pred             CCEEEEEEECCCHHCCCC--------CCHHHHHHHHHHHHCCCEEEEEEEECCCHHHH-HHHHHHHHHCC-------CEE
T ss_conf             926999998541005743--------34419999999997798188999928989999-99999996149-------999


Q ss_pred             EEECC---CCCCCCCCCCCCHHHHHHCC
Q ss_conf             65012---23345898531001122026
Q gi|254780497|r   78 IVATS---TPDQTFPSTAVNIQNRLGMK  102 (324)
Q Consensus        78 i~~s~---~~~~~~p~~a~~i~~~LGl~  102 (324)
                      |...-   |.|++.   .--+++.+|.+
T Consensus        65 I~tGGLGPT~DDlT---~eavA~~~g~~   89 (396)
T PRK03673         65 IVNGGLGPTSDDLS---ALAAATAKGEG   89 (396)
T ss_pred             EECCCCCCCCCHHH---HHHHHHHHCCC
T ss_conf             99388489983357---99999985688


No 209
>PRK07591 threonine synthase; Validated
Probab=75.53  E-value=4.7  Score=20.09  Aligned_cols=68  Identities=13%  Similarity=0.223  Sum_probs=45.3

Q ss_pred             CCCCCC-HHHHHHHHHHCC----CCHHHHHHH---HHH-HC---CCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf             244444-158999999719----787673365---865-19---330126999999999806889998999999714501
Q gi|254780497|r  249 VPHQAN-WRIINSIVDKMK----IPFDKVIVT---VDI-HG---NTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFT  316 (324)
Q Consensus       249 ~~Hq~~-~~~~~~~~~~lg----l~~e~~~~~---~~~-~G---n~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s  316 (324)
                      +.++.+ ...++.+.+.=|    ++.+.+..-   +.+ -|   -..+|..+.+|..+.++|.++++++|++.-.|.|+.
T Consensus       314 ig~P~~~~~~l~avr~sgG~~v~VsD~Ei~~A~~~La~~eGi~vEpasA~alAgl~kl~e~G~i~~de~VV~~lTG~GLK  393 (422)
T PRK07591        314 IGNPADGPYALDIARRTGGAIEDVTDEEIIEGIKLLARTEGIFTETAGGTTVAVLKKLVEAGKIDPDETTVVYITGNGLK  393 (422)
T ss_pred             ECCCCCHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
T ss_conf             07988889999999986998999889999999999997389777860899999999999769999999499990887667


No 210
>CHL00094 dnaK heat shock protein 70
Probab=75.33  E-value=4.3  Score=20.33  Aligned_cols=49  Identities=14%  Similarity=0.120  Sum_probs=33.3

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH---HHHHHHHHCCCCHH
Q ss_conf             55777777788889874001000121024444415---89999997197876
Q gi|254780497|r  222 YAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWR---IINSIVDKMKIPFD  270 (324)
Q Consensus       222 ~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~---~~~~~~~~lgl~~e  270 (324)
                      .........++++|++++++++|||.+++-=++-+   +.+.+.+.+|-++.
T Consensus       306 ~l~~r~~~~v~~~L~~a~l~~~dId~ViLVGGstRiP~V~~~l~~~fgk~~~  357 (622)
T CHL00094        306 DLIDRCRIPVENALKDAKLDKSDIDEVVLVGGSTRIPAIQELVKSLLGKDPN  357 (622)
T ss_pred             HHHHHHHHHHHHHHHHCCCCHHHCEEEEEECCCCCCHHHHHHHHHHHCCCCC
T ss_conf             9999999999999998199988943999938812567899999998589967


No 211
>PRK13411 molecular chaperone DnaK; Provisional
Probab=74.67  E-value=6.5  Score=19.19  Aligned_cols=42  Identities=24%  Similarity=0.345  Sum_probs=25.0

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH---HHHHHHHHC
Q ss_conf             777777788889874001000121024444415---899999971
Q gi|254780497|r  224 VEKAVELIEKVFDSTHLTIENIDWFVPHQANWR---IINSIVDKM  265 (324)
Q Consensus       224 ~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~---~~~~~~~~l  265 (324)
                      .....+.++++|++++++++|||.+++-=++-+   +.+.+.+.+
T Consensus       307 ~~rt~~pv~~aL~dA~l~~~dId~ViLVGGSTRIP~Vq~~v~~~F  351 (655)
T PRK13411        307 VEATIEPVQQALKDAGLTPEDIDRIILVGGSTRIPAVQEAIQQFF  351 (655)
T ss_pred             HHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCCHHHHHHHHHHH
T ss_conf             999998899999980998311789999888146579999999982


No 212
>TIGR00151 ispF 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; InterPro: IPR003526   This entry represents MECDP (2-C-methyl-D-erythritol 2,4-cyclodiphosphate) synthetase, an enzyme in the non-mevalonate pathway of isoprenoid synthesis, isoprenoids being essential in all organisms. Isoprenoids can also be synthesized through the mevalonate pathway. The non-mevolante route is used by many bacteria and human pathogens, including Mycobacterium tuberculosis and Plasmodium falciparum. This route appears to involve seven enzymes. MECDP synthetase catalyses the intramolecular attack by a phosphate group on a diphosphate, with cytidine monophosphate (CMP) acting as the leaving group to give the cyclic diphosphate product MEDCP. The enzyme is a trimer with three active sites shared between adjacent copies of the protein. The enzyme also has two metal binding sites, the metals playing key roles in catalysis.   A number of proteins from eukaryotes and prokaryotes share this common N-terminal signature and appear to be involved in terpenoid biosynthesis. The ygbB protein is a putative enzyme of this type .; GO: 0008685 2-C-methyl-D-erythritol 24-cyclodiphosphate synthase activity, 0016114 terpenoid biosynthetic process.
Probab=74.66  E-value=2.9  Score=21.45  Aligned_cols=58  Identities=21%  Similarity=0.248  Sum_probs=42.4

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCC-CC-----HHHHHHHHHHCCCCHHHHH---HHHHHHCCCHH
Q ss_conf             77778888987400100012102444-44-----1589999997197876733---65865193301
Q gi|254780497|r  227 AVELIEKVFDSTHLTIENIDWFVPHQ-AN-----WRIINSIVDKMKIPFDKVI---VTVDIHGNTSA  284 (324)
Q Consensus       227 ~~~~i~~~L~~~gl~~~did~~~~Hq-~~-----~~~~~~~~~~lgl~~e~~~---~~~~~~Gn~~s  284 (324)
                      +-+.+.+.+++.|++...||..+.=| |.     ..|.+.+++-|+++.|++-   +|-++.|-||.
T Consensus        79 lL~~~~~~~~~~gy~~~N~D~tiia~~PKl~P~i~~mR~~iA~~L~i~~d~vnvKATT~EkLG~~Gr  145 (159)
T TIGR00151        79 LLRKAVELVKEKGYRIGNVDVTIIAQRPKLAPHIEAMRENIAELLGIPLDQVNVKATTTEKLGFTGR  145 (159)
T ss_pred             HHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC
T ss_conf             9999999998558804568999973189862226899999988846870211325876767754423


No 213
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=73.54  E-value=5.3  Score=19.76  Aligned_cols=30  Identities=10%  Similarity=0.177  Sum_probs=15.0

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             777777888898740010001210244444
Q gi|254780497|r  225 EKAVELIEKVFDSTHLTIENIDWFVPHQAN  254 (324)
Q Consensus       225 ~~~~~~i~~~L~~~gl~~~did~~~~Hq~~  254 (324)
                      ......++++|++++++++|||.+++-=++
T Consensus       334 ~rt~~~v~~aL~dAgl~~~dId~VILVGGS  363 (657)
T PTZ00186        334 ERSIAPCKQCMKDAGVELKEINDVVLVGGM  363 (657)
T ss_pred             HHHHHHHHHHHHHHCCCHHHEEEEEEECCC
T ss_conf             999999999999818998780089995784


No 214
>PRK00055 ribonuclease Z; Reviewed
Probab=72.57  E-value=4.8  Score=20.06  Aligned_cols=68  Identities=22%  Similarity=0.307  Sum_probs=44.4

Q ss_pred             CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf             92269999999649841178899988099987811024751889828988999999999999997402123544336650
Q gi|254780497|r    1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVA   80 (324)
Q Consensus         1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~   80 (324)
                      ||++.+.|+|...|.....         .+.-.|+  .+ .++-+.|.++..       . .-|.+.++++.+||.|++.
T Consensus         1 mmkit~LGtg~~~p~~~R~---------~s~~li~--~~-~~~iliD~G~G~-------~-~~l~~~~~~~~~l~~I~iT   60 (259)
T PRK00055          1 MMELTFLGTGSGVPTPTRN---------VSSILLR--LG-GELWLFDCGEGT-------Q-RQMLRAGIGPRKIDRIFIT   60 (259)
T ss_pred             CCEEEEEECCCCCCCCCCC---------CCEEEEE--EC-CEEEEEECCCHH-------H-HHHHHCCCCHHHCCEEEEE
T ss_conf             9489999068998899996---------4889999--99-908999588159-------9-9999819995576589996


Q ss_pred             CCCCCCCC
Q ss_conf             12233458
Q gi|254780497|r   81 TSTPDQTF   88 (324)
Q Consensus        81 s~~~~~~~   88 (324)
                      +...|...
T Consensus        61 H~H~DH~~   68 (259)
T PRK00055         61 HLHGDHIF   68 (259)
T ss_pred             CCCHHHHC
T ss_conf             43357665


No 215
>TIGR02445 fadA acetyl-CoA C-acyltransferase FadA; InterPro: IPR012805    This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (2.3.1.16 from EC) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (IPR012799 from INTERPRO). The FadBA complex is the major complex active for beta-oxidation of fatty acids in Escherichia coli.; GO: 0003988 acetyl-CoA C-acyltransferase activity, 0006631 fatty acid metabolic process, 0016042 lipid catabolic process.
Probab=72.28  E-value=2.6  Score=21.74  Aligned_cols=94  Identities=12%  Similarity=0.137  Sum_probs=65.5

Q ss_pred             CCCHHHHHHHHHHHHHHHH-CCCCCCCCEEEEECCCCCCCC-CCCCCCHHHHH-HCCCC-CCCCCCCCCCCHHHHHHHHH
Q ss_conf             8899999999999999740-212354433665012233458-98531001122-02686-44442101220034678889
Q gi|254780497|r   49 DETTASLGEAAARDALHHA-EMSVDDIDLIIVATSTPDQTF-PSTAVNIQNRL-GMKRG-FAFDMQAVCSGFVYAVTTAD  124 (324)
Q Consensus        49 ~e~~~~la~~Aa~~al~~a-~~~~~~Id~ii~~s~~~~~~~-p~~a~~i~~~L-Gl~~~-~~~di~~~C~~~~~al~~A~  124 (324)
                      +..+-||++.-.+++|+|. .++|.+|+-|++++... .+. .-.-++.+..| .+++. .+..++--|-+.+.+|+.+.
T Consensus        22 ~~raedlsahl~~~~l~rn~~~~~~~~~d~~WGCv~q-tleqG~n~ar~a~ll~~~P~~~~a~tv~rlCGssm~alh~~a  100 (385)
T TIGR02445        22 NTRAEDLSAHLIKKLLARNPKVDPAEVEDIYWGCVQQ-TLEQGFNIARNAALLAEVPHEVAAVTVNRLCGSSMQALHDAA  100 (385)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             0136777899999998513355723443454554677-775347888888898734302222455544203589999887


Q ss_pred             HHHHHCCCCCCEEEEECCC
Q ss_conf             9896415565316763022
Q gi|254780497|r  125 SYIRSGVVRRVMVIGSDTF  143 (324)
Q Consensus       125 ~li~~g~~~~~Lvv~~e~~  143 (324)
                      ..|-++..+..+|-+.|-+
T Consensus       101 ~~imt~~~~~~~~GGvehm  119 (385)
T TIGR02445       101 RAIMTGDAEVCLIGGVEHM  119 (385)
T ss_pred             HHHHCCCCCEEEECCCCCC
T ss_conf             8763178757998260000


No 216
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=71.90  E-value=7.6  Score=18.78  Aligned_cols=60  Identities=22%  Similarity=0.101  Sum_probs=40.5

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC-CCCC------CCCCCCHHHHHHCCCCC---CCCCCCC
Q ss_conf             99999999999974021235443366501223-3458------98531001122026864---4442101
Q gi|254780497|r   53 ASLGEAAARDALHHAEMSVDDIDLIIVATSTP-DQTF------PSTAVNIQNRLGMKRGF---AFDMQAV  112 (324)
Q Consensus        53 ~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~-~~~~------p~~a~~i~~~LGl~~~~---~~di~~~  112 (324)
                      ...-+++++++++++++++++||+|-+...|- ..+.      -+....|++++|++-..   ..||..|
T Consensus        70 ~~~~~~~i~~~i~~~~~~~~~id~Ig~HGQTi~H~P~~~~TlQiG~~~~ia~~tgi~VV~DFR~~Dia~G  139 (366)
T PRK09585         70 GRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPERGFTLQIGDGALLAELTGITVVADFRRRDVAAG  139 (366)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCCCEEEECCCHHHHHHHHCCCEEHHHHHHHHHCC
T ss_conf             9999999999999849980363289758887687158863543398899998819976075379898677


No 217
>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN; InterPro: IPR011975    This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation  which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in . This enzyme is related to aldehyde dehydrogenase family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate entry, IPR011966 from INTERPRO..
Probab=70.33  E-value=8.2  Score=18.56  Aligned_cols=81  Identities=21%  Similarity=0.308  Sum_probs=50.9

Q ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHH---H
Q ss_conf             99999999999999740212354433665012233458985310011220268-6444421012200346788899---8
Q gi|254780497|r   51 TTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTADS---Y  126 (324)
Q Consensus        51 ~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~~---l  126 (324)
                      -++=|.++-||+.|-++|+||   ++|..+-..|..       .++++|=+.+ .-..|.+++-+=+-.=.+.|+.   |
T Consensus       239 LP~AltV~vAreVL~EaGfDP---~lV~Laa~~p~~-------~~Aq~LAl~P~vr~vDFTGS~AFG~WLe~nArQAqVY  308 (560)
T TIGR02288       239 LPLALTVQVAREVLGEAGFDP---NLVALAAEDPGE-------EVAQRLALDPAVRIVDFTGSNAFGEWLEQNARQAQVY  308 (560)
T ss_pred             CHHHHHHHHHHHHHHHHCCCH---HHHHHCCCCCCC-------HHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf             026788899999987416773---020011258884-------3788851399538886258871126899866798888


Q ss_pred             HH-HCCCCCCEEEEECC
Q ss_conf             96-41556531676302
Q gi|254780497|r  127 IR-SGVVRRVMVIGSDT  142 (324)
Q Consensus       127 i~-~g~~~~~Lvv~~e~  142 (324)
                      -+ +| .++++|=|.|-
T Consensus       309 tEkAG-vN~viieSTdd  324 (560)
T TIGR02288       309 TEKAG-VNTVIIESTDD  324 (560)
T ss_pred             HHHCC-CCCEEECCHHH
T ss_conf             87506-67158724166


No 218
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=69.53  E-value=4.9  Score=20.00  Aligned_cols=48  Identities=6%  Similarity=0.005  Sum_probs=33.1

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH---HHHHHHHHCCCCHH
Q ss_conf             5777777788889874001000121024444415---89999997197876
Q gi|254780497|r  223 AVEKAVELIEKVFDSTHLTIENIDWFVPHQANWR---IINSIVDKMKIPFD  270 (324)
Q Consensus       223 ~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~---~~~~~~~~lgl~~e  270 (324)
                      ........++++|++++++++|||.+++-=++-+   +.+.+.+.+|-++.
T Consensus       312 L~~rt~~~v~~aL~dA~l~~~dId~ViLVGGSTRiP~Vq~~v~~~Fgk~~~  362 (621)
T PRK05183        312 LVKRTLLACRRALRDAGVEADEVLEVVMVGGSTRVPLVREAVGEFFGRTPL  362 (621)
T ss_pred             HHHHHHHHHHHHHHHHCCCHHHCEEEEEECCCCCCHHHHHHHHHHHCCCCC
T ss_conf             999999999999987136830020999928854566899999998598966


No 219
>PRK09604 putative DNA-binding/iron metalloprotein/AP endonuclease; Reviewed
Probab=69.32  E-value=8.6  Score=18.42  Aligned_cols=33  Identities=30%  Similarity=0.425  Sum_probs=23.7

Q ss_pred             HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCC
Q ss_conf             99999999740212354433665012233458985
Q gi|254780497|r   57 EAAARDALHHAEMSVDDIDLIIVATSTPDQTFPST   91 (324)
Q Consensus        57 ~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~   91 (324)
                      ...++++|++++++.+|||+|-+. .-| -+.|+.
T Consensus        56 ~~lv~~al~~a~i~~~~id~IAvT-~gP-GL~g~L   88 (335)
T PRK09604         56 PPLLEEALKEAGLSLEDIDAIAVT-AGP-GLVGAL   88 (335)
T ss_pred             HHHHHHHHHHCCCCHHHCCEEEEE-CCC-CCCHHH
T ss_conf             999999998659998789789994-799-961139


No 220
>PRK05638 threonine synthase; Validated
Probab=68.29  E-value=9.1  Score=18.28  Aligned_cols=68  Identities=24%  Similarity=0.359  Sum_probs=45.6

Q ss_pred             CCCCCCH-HHHHHHHHHCC----CCHHHHHH---HHHHHC---CCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf             2444441-58999999719----78767336---586519---330126999999999806889998999999714501
Q gi|254780497|r  249 VPHQANW-RIINSIVDKMK----IPFDKVIV---TVDIHG---NTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFT  316 (324)
Q Consensus       249 ~~Hq~~~-~~~~~~~~~lg----l~~e~~~~---~~~~~G---n~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s  316 (324)
                      +.++.+. .+++.+.+.=|    ++.+.+..   .+.+-|   -..||..+.+|.++.++|.++++++|+++-.|.|+.
T Consensus       280 I~~P~~~~~~l~avr~sgG~~vaVsD~EI~~a~~lla~eGif~EPasAaa~Agl~kl~e~G~I~~~e~VV~vlTGsGLK  358 (443)
T PRK05638        280 VKNPVMKEKVIEAIRESGGTAVVVNEEEIMAGEKLLANEGIFAELSSAVVMPALLKLVETGFIEKGDRVVLVVTGSGLK  358 (443)
T ss_pred             ECCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
T ss_conf             0898899999999998399899828999999999999689147757899999999999769989999299996888777


No 221
>PRK09450 cyaA adenylate cyclase; Provisional
Probab=67.95  E-value=6.5  Score=19.19  Aligned_cols=30  Identities=13%  Similarity=0.176  Sum_probs=14.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE
Q ss_conf             8988999999999999997402123544336
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHAEMSVDDIDLI   77 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~i   77 (324)
                      ...-++-||.+- .||+-..--..|..|++|
T Consensus       408 ~~si~~~Dl~iL-~RKLyaaFe~~pGKV~~i  437 (833)
T PRK09450        408 SSSISPQDIGVL-TRKLYAAFERLPGKVTLL  437 (833)
T ss_pred             CCCCCHHHHHHH-HHHHHHHHHCCCCCEEEE
T ss_conf             655688887899-999999985178814556


No 222
>TIGR01751 crot-CoA-red crotonyl-CoA reductase; InterPro: IPR010085    Crotonyl-CoA reductase is responsible for the conversion of crotonyl-CoA to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate , . In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae  and coronatine from Pseudomonas syringae ..
Probab=67.65  E-value=4.5  Score=20.26  Aligned_cols=29  Identities=17%  Similarity=0.192  Sum_probs=16.2

Q ss_pred             HHHHHHHHHCCCCCCCCE-EEEEEECCCCCE
Q ss_conf             999999998068899989-999997145014
Q gi|254780497|r  288 PLALAVAVKEGRVKKGDC-LLLEAMGGGFTS  317 (324)
Q Consensus       288 ~~~L~~~~~~g~l~~Gd~-vll~~~G~G~s~  317 (324)
                      +-+=...++++. -.|.. ||.++-.+|+..
T Consensus       378 g~Ah~~~~~N~~-~~Gn~aVLv~A~rpGLgv  407 (409)
T TIGR01751       378 GKAHQKVLANQH-HQGNVAVLVLAPRPGLGV  407 (409)
T ss_pred             HHHHHHHHHCCC-CCCCEEEEEECCCCCCCC
T ss_conf             799999984789-657646887327888856


No 223
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=66.96  E-value=8.8  Score=18.37  Aligned_cols=50  Identities=14%  Similarity=0.296  Sum_probs=35.8

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCC---------CHHHHHHHHHHCCCCHHHHHHH
Q ss_conf             77777788889874001000121024444---------4158999999719787673365
Q gi|254780497|r  225 EKAVELIEKVFDSTHLTIENIDWFVPHQA---------NWRIINSIVDKMKIPFDKVIVT  275 (324)
Q Consensus       225 ~~~~~~i~~~L~~~gl~~~did~~~~Hq~---------~~~~~~~~~~~lgl~~e~~~~~  275 (324)
                      ..+-..+.+.|.+.|...++| +++||.+         +.-|+...++..++..++.+.+
T Consensus        68 ~~i~~~m~~~l~~~g~~id~i-y~CPh~p~~~c~cRKP~pGMl~~a~~~~~id~~~s~mI  126 (181)
T PRK08942         68 NALHEKMDWSLADRGGDLDGI-YYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMV  126 (181)
T ss_pred             HHHHHHHHHHHHHCCCCEEEE-EECCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHCEEE
T ss_conf             999999999999769943137-87689971447788998499999999809884218476


No 224
>pfam03702 UPF0075 Uncharacterized protein family (UPF0075). The proteins is this family are about 370 amino acids long and have no known function.
Probab=65.77  E-value=10  Score=17.97  Aligned_cols=58  Identities=21%  Similarity=0.125  Sum_probs=39.5

Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC----------CCCCCHHHHHHCCCC---CCCCCCCC
Q ss_conf             999999999997402123544336650122334589----------853100112202686---44442101
Q gi|254780497|r   54 SLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFP----------STAVNIQNRLGMKRG---FAFDMQAV  112 (324)
Q Consensus        54 ~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p----------~~a~~i~~~LGl~~~---~~~di~~~  112 (324)
                      ..-++|++++++++++++++||+|-+...|- +..|          +.+..|++++|++-.   ..-||..|
T Consensus        68 ~~~a~ai~~~i~~~~~~~~~Id~Ig~HGQTi-~H~P~~~~~~TlQiG~~~~iA~~tgi~VV~DFR~~Dia~G  138 (363)
T pfam03702        68 LLFADAVNELLQKQNLKPSQIRAIGCHGQTV-RHEPNGRFPFTMQIGDPNLIAERTGITVVADFRRRDVAAG  138 (363)
T ss_pred             HHHHHHHHHHHHHCCCCCCCEEEEECCCCEE-EECCCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHCC
T ss_conf             9999999999998399820224895588605-7788999964466397999978869977387663377668


No 225
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=65.50  E-value=8.7  Score=18.40  Aligned_cols=28  Identities=14%  Similarity=0.235  Sum_probs=13.2

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             7777888898740010001210244444
Q gi|254780497|r  227 AVELIEKVFDSTHLTIENIDWFVPHQAN  254 (324)
Q Consensus       227 ~~~~i~~~L~~~gl~~~did~~~~Hq~~  254 (324)
                      ....++++|++++++++|||.+++.=++
T Consensus       315 ~~~~i~~aL~~a~l~~~dId~ViLVGGs  342 (657)
T PTZ00009        315 TLQPVEKVLQDAKMDKRSVHDVVLVGGS  342 (657)
T ss_pred             HHHHHHHHHHHHCCCHHHEEEEEECCCC
T ss_conf             9999999999737995251499980881


No 226
>PRK11762 nudE ADP-ribose diphosphatase NudE; Provisional
Probab=64.99  E-value=9.2  Score=18.25  Aligned_cols=21  Identities=14%  Similarity=0.270  Sum_probs=9.0

Q ss_pred             HHHHHHHHHHCCCCCCCCEEE
Q ss_conf             999999974021235443366
Q gi|254780497|r   58 AAARDALHHAEMSVDDIDLII   78 (324)
Q Consensus        58 ~Aa~~al~~a~~~~~~Id~ii   78 (324)
                      .|.|++.+.+|..++++..|.
T Consensus        92 aA~REL~EETGy~a~~~~~l~  112 (185)
T PRK11762         92 AANRELKEEVGFGARQLTFLK  112 (185)
T ss_pred             HHHHHHHHHHCCCCCCEEEEE
T ss_conf             999998897697747689975


No 227
>pfam00814 Peptidase_M22 Glycoprotease family. The Peptidase M22 proteins are part of the HSP70-actin superfamily. The region represented here is an insert into the fold and is not found in the rest of the family (beyond the Peptidase M22 family). Included in this family are the Rhizobial NodU proteins and the HypF regulator. This region also contains the histidine dyad believed to coordinate the metal ion and hence provide catalytic activity. Interestingly the histidines are not well conserved, and there is a lack of experimental evidence to support peptidase activity as a general property of this family. There also appear to be instances of this domain outside of the HSP70-actin superfamily.
Probab=64.36  E-value=11  Score=17.86  Aligned_cols=25  Identities=32%  Similarity=0.461  Sum_probs=21.1

Q ss_pred             HHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf             9999999974021235443366501
Q gi|254780497|r   57 EAAARDALHHAEMSVDDIDLIIVAT   81 (324)
Q Consensus        57 ~~Aa~~al~~a~~~~~~Id~ii~~s   81 (324)
                      ...++++|++++++.+|||.|.+..
T Consensus        33 ~~~i~~~l~~a~i~~~did~IAvt~   57 (225)
T pfam00814        33 LPLIEEALAEAGLSLEDLDAIAVTA   57 (225)
T ss_pred             HHHHHHHHHHCCCCHHHCCEEEEEC
T ss_conf             9999999998499965689999805


No 228
>PRK09605 O-sialoglycoprotein endopeptidase/protein kinase; Reviewed
Probab=63.90  E-value=11  Score=17.75  Aligned_cols=87  Identities=15%  Similarity=0.249  Sum_probs=42.5

Q ss_pred             HHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCC--CCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf             9999999997402123544336650122334589853--1001122026-864444210122003467888998964155
Q gi|254780497|r   56 GEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTA--VNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADSYIRSGVV  132 (324)
Q Consensus        56 a~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a--~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~li~~g~~  132 (324)
                      ....+++||++++++++|||+|-+.. -| -+.|+.-  ...++.|-+. +.+-..|+. |-|=+     ....+.++..
T Consensus        53 i~~vv~~aL~~A~i~~~dIdaIA~T~-GP-GL~g~L~VG~~~Ak~La~~~~~PligVnH-~~gHi-----~~~rl~~~~~  124 (536)
T PRK09605         53 IPKVIKEALEEAGIKKGDIDLVAFSQ-GP-GLGPCLRVVATAARALALSLDVPLIGVNH-CIAHV-----EIGRLTTGAR  124 (536)
T ss_pred             HHHHHHHHHHHCCCCHHHCCEEEECC-CC-CCHHHHHHHHHHHHHHHHHHCCCEEECCH-HHHHH-----HHHHHCCCCC
T ss_conf             99999999998499988898999906-99-81786899999999999984998500340-89887-----4423106987


Q ss_pred             C-CCEEEEECCCCCCCCCCC
Q ss_conf             6-531676302243222456
Q gi|254780497|r  133 R-RVMVIGSDTFSRIVDWSD  151 (324)
Q Consensus       133 ~-~~Lvv~~e~~S~~~d~~d  151 (324)
                      . -+|+|++-.. ..+.+.+
T Consensus       125 ~Pl~L~VSGGhT-qii~~~~  143 (536)
T PRK09605        125 DPVTLYVSGGNT-QVLAYLN  143 (536)
T ss_pred             CCCEEEEECCCE-EEEEECC
T ss_conf             885699976864-8999848


No 229
>PRK06260 threonine synthase; Validated
Probab=63.27  E-value=11  Score=17.67  Aligned_cols=62  Identities=13%  Similarity=0.200  Sum_probs=42.6

Q ss_pred             HHHHHHHHHCC----CCHHHHHH---HHH-HHCC---CHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCE
Q ss_conf             58999999719----78767336---586-5193---301269999999998068899989999997145014
Q gi|254780497|r  256 RIINSIVDKMK----IPFDKVIV---TVD-IHGN---TSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFTS  317 (324)
Q Consensus       256 ~~~~~~~~~lg----l~~e~~~~---~~~-~~Gn---~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~  317 (324)
                      ..++.+.+.-|    ++.+.+..   .+. +-|-   ..|+..+.+|..+.++|.+++++.|++.-.|.|+.-
T Consensus       301 ~~l~al~~s~G~~v~VtD~ei~~A~~~La~~eGi~vEpasA~alAgl~kl~e~G~i~~~~~VV~~lTG~GlKD  373 (400)
T PRK06260        301 KALRAIRESGGTAESVSDEEILAAQRLLARKEGIGVEPASAASVAGLIKLVEMGVIDKDEKVVCVTTGHLLKD  373 (400)
T ss_pred             HHHHHHHHHCCEEEEECHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC
T ss_conf             9999999839989998899999999999974890678368999999999997399999997999907887689


No 230
>PRK07409 threonine synthase; Validated
Probab=63.15  E-value=11  Score=17.66  Aligned_cols=36  Identities=25%  Similarity=0.413  Sum_probs=30.3

Q ss_pred             CHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCE
Q ss_conf             301269999999998068899989999997145014
Q gi|254780497|r  282 TSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFTS  317 (324)
Q Consensus       282 ~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~  317 (324)
                      .+|+..+.++-++.++|++.+|+.|+++-.|.|+.-
T Consensus       289 pssaaa~Aa~~kl~~~g~i~~~~~VV~iltg~GlKd  324 (350)
T PRK07409        289 PASAASVAGLLKAKEQGKVPKGSTVVCTLTGNGLKD  324 (350)
T ss_pred             CCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCC
T ss_conf             208999999999997599999996999958898868


No 231
>KOG2707 consensus
Probab=62.79  E-value=9.9  Score=18.03  Aligned_cols=29  Identities=34%  Similarity=0.402  Sum_probs=22.2

Q ss_pred             HHHHHHHHHHCCCCCCCCEEEEECCCCCCC
Q ss_conf             999999974021235443366501223345
Q gi|254780497|r   58 AAARDALHHAEMSVDDIDLIIVATSTPDQT   87 (324)
Q Consensus        58 ~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~   87 (324)
                      ...++||++++..|+|+|+|-+ |..|...
T Consensus        88 ~~iqral~aa~~~p~dldaIAV-T~gPGl~  116 (405)
T KOG2707          88 RLIQRALDAAGLSPKDLDAIAV-TRGPGLP  116 (405)
T ss_pred             HHHHHHHHHCCCCCCCCEEEEE-ECCCCCE
T ss_conf             9999999970899455116999-6389964


No 232
>COG3072 CyaA Adenylate cyclase [Nucleotide transport and metabolism]
Probab=62.63  E-value=4  Score=20.59  Aligned_cols=18  Identities=17%  Similarity=-0.065  Sum_probs=9.8

Q ss_pred             CHHHHHHHHCCCHHHHHH
Q ss_conf             788999880999878110
Q gi|254780497|r   19 SNSDLESIVDTSDGWIKR   36 (324)
Q Consensus        19 ~~~el~~~~~~~~~~i~~   36 (324)
                      .-+.+...++++++.|+.
T Consensus       354 ~l~~LvsEW~Ws~~~la~  371 (853)
T COG3072         354 VLEQLVSEWGWSAARLAE  371 (853)
T ss_pred             HHHHHHHHHCCCHHHHHH
T ss_conf             999999885888789998


No 233
>PRK09275 aspartate aminotransferase; Provisional
Probab=62.07  E-value=12  Score=17.54  Aligned_cols=93  Identities=20%  Similarity=0.209  Sum_probs=47.9

Q ss_pred             HHCCCCCEEEEE--C--CCCCHHHHHHHHHHHHHHHHCCCCCCC-----CEEEEEC-CCCCCCCCCCCC----CHHHHHH
Q ss_conf             102475188982--8--988999999999999997402123544-----3366501-223345898531----0011220
Q gi|254780497|r   35 KRRVGISRRHIA--G--KDETTASLGEAAARDALHHAEMSVDDI-----DLIIVAT-STPDQTFPSTAV----NIQNRLG  100 (324)
Q Consensus        35 ~~~~GI~~R~~~--~--~~e~~~~la~~Aa~~al~~a~~~~~~I-----d~ii~~s-~~~~~~~p~~a~----~i~~~LG  100 (324)
                      -++.||.+|...  .  ++..-.++-..++.-+..+.|++|++.     |.++-+. -.||+..+.+-.    ++.+++-
T Consensus        78 p~~~Gi~~Rf~~fl~~~~~~pG~~fL~~~~~y~~~~~g~d~d~~v~El~dgiiGdnYPvP~RmL~~~E~Iv~~YL~~em~  157 (531)
T PRK09275         78 PQKEGIAERFETFLEEHKDVPGIDFLRAAISYVRDELGFDPDEFVYEMVDGIIGDNYPVPDRMLVHTEKIVKDYLRQEMC  157 (531)
T ss_pred             CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf             57022999999999858998368999999999998869998899999998863388999678889899999999999962


Q ss_pred             CCCCC--CCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             26864--44421012200346788899896
Q gi|254780497|r  101 MKRGF--AFDMQAVCSGFVYAVTTADSYIR  128 (324)
Q Consensus       101 l~~~~--~~di~~~C~~~~~al~~A~~li~  128 (324)
                      -...+  -||+ .+--|++.||-...+-++
T Consensus       158 ~~~~~~~~fdl-FatEGgTAAM~YiF~sL~  186 (531)
T PRK09275        158 GNRPPPGEFDL-FAVEGGTAAMCYIFDSLK  186 (531)
T ss_pred             CCCCCCCCCCE-EECCCCHHHHHHHHHHHH
T ss_conf             89999887316-741672057999999999


No 234
>PRK06721 threonine synthase; Reviewed
Probab=60.73  E-value=13  Score=17.39  Aligned_cols=35  Identities=20%  Similarity=0.414  Sum_probs=29.5

Q ss_pred             CHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf             30126999999999806889998999999714501
Q gi|254780497|r  282 TSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFT  316 (324)
Q Consensus       282 ~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s  316 (324)
                      .+++..+.++-++.+++++++|++|+++-.|.|+.
T Consensus       285 pssa~alAallkl~~~g~i~~g~~VV~iltg~GlK  319 (352)
T PRK06721        285 PGSNASLAGVMKHVQSGKIKKGETVVAVLTGNGLK  319 (352)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
T ss_conf             78899999999999839989879899995899877


No 235
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=60.33  E-value=13  Score=17.38  Aligned_cols=27  Identities=7%  Similarity=0.260  Sum_probs=14.2

Q ss_pred             HHHHHHHHHHHCCCCCCCCEEEEECCCCCC
Q ss_conf             999999997402123544336650122334
Q gi|254780497|r   57 EAAARDALHHAEMSVDDIDLIIVATSTPDQ   86 (324)
Q Consensus        57 ~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~   86 (324)
                      .+-..+.|++.|+   .||.+.+|--.|+.
T Consensus        72 h~~m~~~L~~~Gi---~id~Iy~CPH~p~d   98 (354)
T PRK05446         72 HNLMMQIFESQGI---KFDDVLICPHFPED   98 (354)
T ss_pred             HHHHHHHHHHCCC---CCCEEEECCCCCCC
T ss_conf             9999999997797---34759988998857


No 236
>pfam06406 StbA StbA protein. This family consists of several bacterial StbA plasmid stability proteins.
Probab=60.30  E-value=7.8  Score=18.69  Aligned_cols=29  Identities=17%  Similarity=0.248  Sum_probs=25.6

Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCCCEEE
Q ss_conf             89999999999999974021235443366
Q gi|254780497|r   50 ETTASLGEAAARDALHHAEMSVDDIDLII   78 (324)
Q Consensus        50 e~~~~la~~Aa~~al~~a~~~~~~Id~ii   78 (324)
                      ...+++..-++..||.++|+.|.+|++++
T Consensus        72 yq~s~~N~l~vhHAL~~aGl~~~~V~lvv  100 (318)
T pfam06406        72 YQYSDVNVLAIHHALLTSGLVPQPVDLVV  100 (318)
T ss_pred             CCCCHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf             57536789999999997288987058996


No 237
>pfam00862 Sucrose_synth Sucrose synthase. Sucrose synthases catalyse the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534.
Probab=59.59  E-value=7  Score=18.99  Aligned_cols=37  Identities=5%  Similarity=0.180  Sum_probs=13.8

Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCHHH-HHHHHHHCCCC
Q ss_conf             77888898740010001210244444158-99999971978
Q gi|254780497|r  229 ELIEKVFDSTHLTIENIDWFVPHQANWRI-INSIVDKMKIP  268 (324)
Q Consensus       229 ~~i~~~L~~~gl~~~did~~~~Hq~~~~~-~~~~~~~lgl~  268 (324)
                      ++-++.+++.+-+|   |.++-+-..... --.++.+||++
T Consensus       389 Da~~ei~~el~g~P---DLIIGNYSDGNLVAsLla~klgVT  426 (550)
T pfam00862       389 DVASEIAAELQAKP---DLIIGNYSDGNLVASLLAHKLGVT  426 (550)
T ss_pred             HHHHHHHHHHCCCC---CEEEECCCCCHHHHHHHHHHCCCC
T ss_conf             99999999848998---879841777229999998653871


No 238
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family; InterPro: IPR014188   This entry represents a subfamily of the alcohol dehydrogenase, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This entry includes YhdH from Escherichia coli and YhfP from Bacillus subtilis both of which bind NADPH or NAD, but not zinc. Both proteins have been studied crystallographically for insight into function. .
Probab=59.49  E-value=6.5  Score=19.21  Aligned_cols=152  Identities=15%  Similarity=0.162  Sum_probs=66.3

Q ss_pred             CCCCEEEEECCCCCCCCCCCCCCEEEE---EECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHH-HHHHHHHHHH
Q ss_conf             443123440265446543445410123---203555556177548765444332001032024445577-7777788889
Q gi|254780497|r  160 DGAGALILEGVEVKGSSMADTGILSTY---LCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVE-KAVELIEKVF  235 (324)
Q Consensus       160 DGAaA~ll~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~i~~~L  235 (324)
                      |.|+-++=|+++..  ..++.-+++.+   ..++|-|.+..+.++..--+-+.+. ..  |+-.-.... .-.-+.=..|
T Consensus        65 D~aG~Vv~S~dp~F--~~GD~VivTGyglG~~H~GGysqyaRVp~dWlVpLP~gl-sl--~eAM~~GTAGfTAaL~V~aL  139 (330)
T TIGR02823        65 DLAGTVVSSEDPRF--RPGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGL-SL--REAMALGTAGFTAALSVMAL  139 (330)
T ss_pred             CCEEEEEECCCCCC--CCCCEEEEEEECCCCCCCCCCEEEEEECHHHEECCCCCC-CH--HHHHHHHHHHHHHHHHHHHH
T ss_conf             75468984488775--788718997402456515762235673323101588988-98--89998600778999999999


Q ss_pred             HHHH-CCCCCCCCC--------------CCC--------CCCHHHHH-HHHHHCCC----CHHHHHH-----HHH--HHC
Q ss_conf             8740-010001210--------------244--------44415899-99997197----8767336-----586--519
Q gi|254780497|r  236 DSTH-LTIENIDWF--------------VPH--------QANWRIIN-SIVDKMKI----PFDKVIV-----TVD--IHG  280 (324)
Q Consensus       236 ~~~g-l~~~did~~--------------~~H--------q~~~~~~~-~~~~~lgl----~~e~~~~-----~~~--~~G  280 (324)
                      +++| ++|++=.-+              ++|        -.+|.--+ .+.++||-    +.+.+-.     -|+  +++
T Consensus       140 e~~Gl~~P~~GpVlVTGAtGGVGS~Av~~L~~lGY~V~A~tGk~~~~~~yL~~LGA~evi~R~~l~~~a~~kPL~k~~WA  219 (330)
T TIGR02823       140 ERNGLLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEVEYLKELGASEVIDREELSEDAPGKPLEKERWA  219 (330)
T ss_pred             HHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCC
T ss_conf             97268888888788706778778999999983797699973783778899986581105771122768788863122222


Q ss_pred             ----CCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEE
Q ss_conf             ----330126999999999806889998999999714501456878
Q gi|254780497|r  281 ----NTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFTSGTVLL  322 (324)
Q Consensus       281 ----n~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~a~ll  322 (324)
                          .+|+..    |+..++  +++.|--|-.||.-+|....++++
T Consensus       220 GAvDtVGG~~----La~~l~--~~~ygG~VA~cGlagG~~L~tTV~  259 (330)
T TIGR02823       220 GAVDTVGGKT----LANVLA--QLKYGGAVAACGLAGGADLPTTVL  259 (330)
T ss_pred             CEEECCCHHH----HHHHHH--HHCCCCEEEEEECCCCCCCCCEEC
T ss_conf             1574687579----999998--406897899994267986350125


No 239
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=58.91  E-value=7.4  Score=18.86  Aligned_cols=34  Identities=29%  Similarity=0.291  Sum_probs=24.6

Q ss_pred             HHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCC
Q ss_conf             999999999740212354433665012233458985
Q gi|254780497|r   56 GEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPST   91 (324)
Q Consensus        56 a~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~   91 (324)
                      .....+++|++++++.+|||+|-+.. -| -+.|+.
T Consensus        54 i~~li~~al~eA~~~~~dID~IA~T~-gP-GL~gaL   87 (342)
T COG0533          54 IPPLIEEALAEAGVSLEDIDAIAVTA-GP-GLGGAL   87 (342)
T ss_pred             HHHHHHHHHHHCCCCHHCCCEEEEEC-CC-CCHHHH
T ss_conf             99999999998499830188899816-99-944778


No 240
>PRK06352 threonine synthase; Validated
Probab=58.76  E-value=14  Score=17.17  Aligned_cols=50  Identities=20%  Similarity=0.371  Sum_probs=35.5

Q ss_pred             CCHHHHHHH---H-HHHCC---CHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf             787673365---8-65193---30126999999999806889998999999714501
Q gi|254780497|r  267 IPFDKVIVT---V-DIHGN---TSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFT  316 (324)
Q Consensus       267 l~~e~~~~~---~-~~~Gn---~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s  316 (324)
                      ++.+.....   + ++-|-   .+|+..+.+|-++.++|.+.+|++|+++-.|.|+.
T Consensus       263 Vsd~Ei~~A~~~La~~eGi~~epssa~alAallkl~~~G~l~~g~~VV~vltg~GlK  319 (351)
T PRK06352        263 VTDDEIVNAYKKIAAQDGVFIEPGSAASLAGVIQHVANGTIKKGETVVCVFTGNGLK  319 (351)
T ss_pred             ECHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
T ss_conf             768999999999999659188777899999999999749999859899995889986


No 241
>TIGR00080 pimt protein-L-isoaspartate O-methyltransferase; InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase () (PCMT)  (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyzes the transfer of a methyl group from S- adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerization of normal L-aspartyl and L- asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process.
Probab=56.46  E-value=7.5  Score=18.82  Aligned_cols=50  Identities=16%  Similarity=0.311  Sum_probs=29.5

Q ss_pred             CCCCCCHHHHHH--CCC-CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf             985310011220--268-644442101220034678889989641556531676302243
Q gi|254780497|r   89 PSTAVNIQNRLG--MKR-GFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSR  145 (324)
Q Consensus        89 p~~a~~i~~~LG--l~~-~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~  145 (324)
                      |-+.++..+-|.  |.+ .-++||.+|| |.. +.-+|.- +    .++.+||+-|+.-.
T Consensus        66 p~mvA~m~~yL~nhL~~~~~vLeiG~GS-GY~-aavlA~~-v----~~~G~V~SiEri~~  118 (228)
T TIGR00080        66 PHMVAKMTEYLENHLKPGAKVLEIGTGS-GYQ-AAVLAEI-V----GRDGLVVSIERIPE  118 (228)
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEEECCCC-HHH-HHHHHHH-H----HCCCEEEEEEECHH
T ss_conf             7899999998885214035566504785-589-9999998-7----13971899853578


No 242
>pfam00012 HSP70 Hsp70 protein. Hsp70 chaperones help to fold many proteins. Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region.
Probab=56.29  E-value=15  Score=16.91  Aligned_cols=51  Identities=20%  Similarity=0.186  Sum_probs=36.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH---HHHHHHHHCCCCHHH
Q ss_conf             455777777788889874001000121024444415---899999971978767
Q gi|254780497|r  221 KYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWR---IINSIVDKMKIPFDK  271 (324)
Q Consensus       221 ~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~---~~~~~~~~lgl~~e~  271 (324)
                      +.....+...++++|++++++++|||.+++.=++-+   +.+.+.+.+|-+..+
T Consensus       302 ~~l~~r~~~~i~~~L~~a~l~~~dId~ViLvGGssRiP~Vq~~l~~~fg~~~~~  355 (598)
T pfam00012       302 ADLFERTLEPVEKALKDAKLSKSEIDEVVLVGGSTRIPAVQELVKEFFGKEPSK  355 (598)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCHHHHHHHHHHHCCCCCC
T ss_conf             999999999998789872899545125786188656768999999986899666


No 243
>COG3894 Uncharacterized metal-binding protein [General function prediction only]
Probab=54.33  E-value=16  Score=16.71  Aligned_cols=65  Identities=20%  Similarity=0.062  Sum_probs=44.6

Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH-HHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf             7777788889874001000121024444415-89999997197876733658651933012699999
Q gi|254780497|r  226 KAVELIEKVFDSTHLTIENIDWFVPHQANWR-IINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLAL  291 (324)
Q Consensus       226 ~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~-~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L  291 (324)
                      .+..-+.-+++++|+.++|++.+.+--+... +.-.-+..+|+-|+-.. .+..+||++-+--..+|
T Consensus       475 AirAG~~tL~~kaGie~eDie~~ymAGAfGtyid~~~A~~iGliPd~~~-kV~q~GNtslagAr~aL  540 (614)
T COG3894         475 AIRAGHMTLIEKAGIELEDIERIYMAGAFGTYIDAKKAMVIGLIPDCDL-KVKQIGNTSLAGAREAL  540 (614)
T ss_pred             HHHHHHHHHHHHCCCCHHHHHHEEECCCCCCCCCHHHHHEEECCCCCCH-HHHHHCCCHHHHHHHHH
T ss_conf             8998899999980997554244032145523026567303505678515-46543660688899998


No 244
>TIGR00289 TIGR00289 conserved hypothetical protein TIGR00289; InterPro: IPR005237   This family of conserved hypothetical proteins has no known function. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs in the family, the much longer protein YLR143W from Saccharomyces cerevisiae (Baker's yeast), and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group..
Probab=53.37  E-value=8.7  Score=18.39  Aligned_cols=28  Identities=14%  Similarity=0.370  Sum_probs=16.9

Q ss_pred             CCEEEEECCCCCCCCCCCCCCHHHHHHCC
Q ss_conf             43366501223345898531001122026
Q gi|254780497|r   74 IDLIIVATSTPDQTFPSTAVNIQNRLGMK  102 (324)
Q Consensus        74 Id~ii~~s~~~~~~~p~~a~~i~~~LGl~  102 (324)
                      +|.|+.+.....|. .+=--.|+++||++
T Consensus        90 vea~~~Ga~~S~YQ-K~Rid~vCrelGlk  117 (227)
T TIGR00289        90 VEAVVIGAIESEYQ-KSRIDKVCRELGLK  117 (227)
T ss_pred             CCEEEECCEECCHH-HHHHHHHHHHHCCH
T ss_conf             45478853410112-33577887771410


No 245
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=51.92  E-value=11  Score=17.70  Aligned_cols=32  Identities=19%  Similarity=0.286  Sum_probs=18.5

Q ss_pred             CCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHH
Q ss_conf             58985310011220268-6444421012200346
Q gi|254780497|r   87 TFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYA  119 (324)
Q Consensus        87 ~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~a  119 (324)
                      ..|...+++.+.|.+++ .-+++|..| +|+..|
T Consensus        56 s~P~~vA~m~~~L~~~~g~~VLEIGtG-sGY~aA   88 (209)
T COG2518          56 SAPHMVARMLQLLELKPGDRVLEIGTG-SGYQAA   88 (209)
T ss_pred             CCCHHHHHHHHHHCCCCCCEEEEECCC-CHHHHH
T ss_conf             574799999997489999868887778-309999


No 246
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=51.69  E-value=15  Score=16.97  Aligned_cols=33  Identities=15%  Similarity=0.071  Sum_probs=17.3

Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHC
Q ss_conf             1000121024444415899999971978767336586519
Q gi|254780497|r  241 TIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHG  280 (324)
Q Consensus       241 ~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~G  280 (324)
                      ...++|++ ..|-+...      -.|++++++....+++|
T Consensus       334 ~~~~f~~i-~~Q~GMFs------y~Gls~~QV~rLree~~  366 (396)
T COG1448         334 APRNFDFI-ISQRGMFS------YTGLSPEQVDRLREEFG  366 (396)
T ss_pred             CCCCCCHH-HHCCCEEE------CCCCCHHHHHHHHHHCC
T ss_conf             88662247-54675244------58999999999998566


No 247
>COG2073 CbiG Cobalamin biosynthesis protein CbiG [Coenzyme metabolism]
Probab=51.63  E-value=18  Score=16.44  Aligned_cols=86  Identities=24%  Similarity=0.275  Sum_probs=60.7

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCC--CCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf             7777778888987400100012102444--44158999999719787673365865193301269999999998068899
Q gi|254780497|r  225 EKAVELIEKVFDSTHLTIENIDWFVPHQ--ANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKK  302 (324)
Q Consensus       225 ~~~~~~i~~~L~~~gl~~~did~~~~Hq--~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~  302 (324)
                      ..+...++++|+..++.+.+++.+....  .+...+.+..+.+++|..-+-...++.| +.+.+-+.+|-.   .+    
T Consensus       209 ~~~~~~i~~~l~~~~l~~~~i~~i~s~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~g-v~~vae~~al~~---~~----  280 (298)
T COG2073         209 ELLECAIEKALEGLGLAPKRIDGIASIALKADEPGLIQLAKKLGVPFITFEFVLKEVG-VPGVAEPAALLA---SG----  280 (298)
T ss_pred             HHHHHHHHHHHHHCCCCHHHHHHEEEHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHC-CCCHHHHHHHHH---CC----
T ss_conf             8999999999987599855632234078753577789999980999441167888738-730356889985---79----


Q ss_pred             CCEEEEEEECCCCCEEE
Q ss_conf             98999999714501456
Q gi|254780497|r  303 GDCLLLEAMGGGFTSGT  319 (324)
Q Consensus       303 Gd~vll~~~G~G~s~~a  319 (324)
                       ..+..-.++.|.|.+.
T Consensus       281 -~l~~~~~~~~~vTiai  296 (298)
T COG2073         281 -GLLVKKAKGNGVTIAI  296 (298)
T ss_pred             -CCEEEEECCCCEEEEE
T ss_conf             -8266650377417884


No 248
>pfam01968 Hydantoinase_A Hydantoinase/oxoprolinase. This family includes the enzymes hydantoinase and oxoprolinase EC:3.5.2.9. Both reactions involve the hydrolysis of 5-membered rings via hydrolysis of their internal imide bonds.
Probab=51.53  E-value=18  Score=16.43  Aligned_cols=51  Identities=12%  Similarity=0.089  Sum_probs=36.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
Q ss_conf             244455777777788889874001000121024444415899999971978
Q gi|254780497|r  218 AVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIP  268 (324)
Q Consensus       218 ~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~  268 (324)
                      .+.+.+..++.+.+++...+.|+++.|+..+.+--+...+...++++||++
T Consensus       210 ~ii~~~~~~m~~ai~~~~~~~g~dp~~~~lv~~GGag~~~~~~la~~lg~~  260 (285)
T pfam01968       210 GILRIANETMADAVRLLSVERGLDPRDFPLVVFGGAGPLHAPELAEELGIK  260 (285)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCCCC
T ss_conf             999999999999999999984999778789998782999999999985999


No 249
>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional
Probab=51.51  E-value=18  Score=16.43  Aligned_cols=82  Identities=20%  Similarity=0.296  Sum_probs=50.7

Q ss_pred             HHHHHHHCCCCCCCCEEE-EECCCC-CC----CCCCCCCCHHHHH---HCCCCCCCCCCC-CCCCHH---------HHHH
Q ss_conf             999974021235443366-501223-34----5898531001122---026864444210-122003---------4678
Q gi|254780497|r   61 RDALHHAEMSVDDIDLII-VATSTP-DQ----TFPSTAVNIQNRL---GMKRGFAFDMQA-VCSGFV---------YAVT  121 (324)
Q Consensus        61 ~~al~~a~~~~~~Id~ii-~~s~~~-~~----~~p~~a~~i~~~L---Gl~~~~~~di~~-~C~~~~---------~al~  121 (324)
                      -.|++|+  ++..|..|| |-...+ |.    -.|=+|..|++.|   |+.+..+.|+.. ..-||.         .+..
T Consensus       194 IDA~KRA--SA~rITAVIPYfGYARQDRK~~~R~PISAKlVAnLL~~aGaDRVITmDLHa~QIQGFFd~nIPVDnL~a~p  271 (443)
T PTZ00145        194 ISTCRRA--SAKKITAVIPYYGYARQDRKLSSRVPISAADVARMIEAMGVDRVVAIDLHSGQIQGFFGPRVPVDNLEAQL  271 (443)
T ss_pred             HHHHHHC--CCCCEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCEEEEEECCCHHHCCCCCCCCCCCCCCCCH
T ss_conf             9997661--56746999147752468787899987059999999986398849997068567624258998621365247


Q ss_pred             HHHHHHHHCCCCCCEEEEECCCC
Q ss_conf             88998964155653167630224
Q gi|254780497|r  122 TADSYIRSGVVRRVMVIGSDTFS  144 (324)
Q Consensus       122 ~A~~li~~g~~~~~Lvv~~e~~S  144 (324)
                      +...+++....++.+||+.|.-.
T Consensus       272 ll~~y~~~~~l~n~VVVSPD~Gg  294 (443)
T PTZ00145        272 IGLDYFTKKDLYKPVIVSPDAGG  294 (443)
T ss_pred             HHHHHHHHCCCCCCEEECCCCCH
T ss_conf             67999984599888898389974


No 250
>PTZ00340 O-sialoglycoprotein endopeptidase; Provisional
Probab=50.98  E-value=18  Score=16.37  Aligned_cols=33  Identities=24%  Similarity=0.318  Sum_probs=23.5

Q ss_pred             HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCC
Q ss_conf             99999999740212354433665012233458985
Q gi|254780497|r   57 EAAARDALHHAEMSVDDIDLIIVATSTPDQTFPST   91 (324)
Q Consensus        57 ~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~   91 (324)
                      ...++++|++++++++|||+|-+. .-| -+.++.
T Consensus        61 ~~lv~~aL~~a~i~~~did~IAvT-~gP-GL~g~L   93 (348)
T PTZ00340         61 LSLVQEALEEAGITLSDISLICYT-KGP-GMGAPL   93 (348)
T ss_pred             HHHHHHHHHHCCCCHHCCCEEEEC-CCC-CCHHHH
T ss_conf             999999999859984118579972-799-851658


No 251
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=50.68  E-value=16  Score=16.78  Aligned_cols=33  Identities=27%  Similarity=0.554  Sum_probs=28.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf             889999999999999974021235443366501
Q gi|254780497|r   49 DETTASLGEAAARDALHHAEMSVDDIDLIIVAT   81 (324)
Q Consensus        49 ~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s   81 (324)
                      .|+..+|-.....+++++++++.+|+|+|+-.|
T Consensus        62 resV~elV~dtl~e~~k~A~l~i~DL~FVVRST   94 (445)
T TIGR03285        62 RESVAELVKDTLKESLKKAGLDIDDLDFVVRST   94 (445)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCHHCCEEEEEC
T ss_conf             889999999999999997399802255799506


No 252
>cd06449 ACCD Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia.
Probab=50.51  E-value=18  Score=16.33  Aligned_cols=32  Identities=22%  Similarity=0.360  Sum_probs=27.4

Q ss_pred             CHHHHHHHHHHHHHHCCCCCCCCEEEEEEECC
Q ss_conf             30126999999999806889998999999714
Q gi|254780497|r  282 TSAASIPLALAVAVKEGRVKKGDCLLLEAMGG  313 (324)
Q Consensus       282 ~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~  313 (324)
                      ++++-.+.+|-+.++++.+++|++|+++=.|.
T Consensus       276 vYTgKa~~gl~~~i~~g~~~~~~~IlfiHTGG  307 (307)
T cd06449         276 VYEGKSMQGMIDLVRNGEFKEGSKVLFIHLGG  307 (307)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
T ss_conf             27899999999999869999979189995999


No 253
>TIGR01991 HscA Fe-S protein assembly chaperone HscA; InterPro: IPR010236   Iron-sulphur (FeS) clusters are important cofactors for numerous proteins involved in electron transfer, in redox and non-redox catalysis, in gene regulation, and as sensors of oxygen and iron. These functions depend on the various FeS cluster prosthetic groups, the most common being [2Fe-2S] and [4Fe-4S] . FeS cluster assembly is a complex process involving the mobilisation of Fe and S atoms from storage sources, their assembly into [Fe-S] form, their transport to specific cellular locations, and their transfer to recipient apoproteins. So far, three FeS assembly machineries have been identified, which are capable of synthesising all types of [Fe-S] clusters: ISC (iron-sulphur cluster), SUF (sulphur assimilation), and NIF (nitrogen fixation) systems.   The ISC system is conserved in eubacteria and eukaryotes (mitochondria), and has broad specificity, targeting general FeS proteins , . It is encoded by the isc operon (iscRSUA-hscBA-fdx-iscX). IscS is a cysteine desulphurase, which obtains S from cysteine (converting it to alanine) and serves as a S donor for FeS cluster assembly. IscU and IscA act as scaffolds to accept S and Fe atoms, assembling clusters and transfering them to recipient apoproteins. HscA is a molecular chaperone and HscB is a co-chaperone. Fdx is a [2Fe-2S]-type ferredoxin. IscR is a transcription factor that regulates expression of the isc operon. IscX (also known as YfhJ) appears to interact with IscS and may function as an Fe donor during cluster assembly .   The SUF system is an alternative pathway to the ISC system that operates under iron starvation and oxidative stress. It is found in eubacteria, archaea and eukaryotes (plastids). The SUF system is encoded by the suf operon (sufABCDSE), and the six encoded proteins are arranged into two complexes (SufSE and SufBCD) and one protein (SufA). SufS is a pyridoxal-phosphate (PLP) protein displaying cysteine desulphurase activity. SufE acts as a scaffold protein that accepts S from SufS and donates it to SufA . SufC is an ATPase with an unorthodox ATP-binding cassette (ABC)-like component. No specific functions have been assigned to SufB and SufD. SufA is homologous to IscA , acting as a scaffold protein in which Fe and S atoms are assembled into [FeS] cluster forms, which can then easily be transferred to apoproteins targets.   In the NIF system, NifS and NifU are required for the formation of metalloclusters of nitrogenase in Azotobacter vinelandii, and other organisms, as well as in the maturation of other FeS proteins. Nitrogenase catalyses the fixation of nitrogen. It contains a complex cluster, the FeMo cofactor, which contains molybdenum, Fe and S. NifS is a cysteine desulphurase. NifU binds one Fe atom at its N-terminal, assembling an FeS cluster that is transferred to nitrogenase apoproteins . Nif proteins involved in the formation of FeS clusters can also be found in organisms that do not fix nitrogen .   This entry represents the HscA chaperone protein from the SUF system. HscA (or Hsc66) is a specialised bacterial Hsp70-class molecular chaperone that participates in the assembly of iron-sulphur cluster proteins. HscA resembles DnaK, but belongs to a separate clade. HscA interacts with IscU, which is believed to serve as a template for Fe-S cluster formation. The HscA-IscU interaction is facilitated by the J-type co-chaperone protein HscB (or Hsc20), which binds to both HscA and IscU, bringing them into contact with each other. HscA recognises a conserved LPPVK sequence motif at positions 99-103 of IscU .; GO: 0005524 ATP binding, 0016887 ATPase activity, 0051082 unfolded protein binding, 0016226 iron-sulfur cluster assembly.
Probab=50.11  E-value=13  Score=17.21  Aligned_cols=106  Identities=19%  Similarity=0.275  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHHCCCCCCCCEEEEE-CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHH---HHHHHHHCC
Q ss_conf             9999999997402123544336650-122334589853100112202686444421012200346788---899896415
Q gi|254780497|r   56 GEAAARDALHHAEMSVDDIDLIIVA-TSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTT---ADSYIRSGV  131 (324)
Q Consensus        56 a~~Aa~~al~~a~~~~~~Id~ii~~-s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~---A~~li~~g~  131 (324)
                      ..+++|+||+++|+++++|.-||.+ .+|   -+|-.-.+|.+.+|-++-.  ||+=-   -+.||-.   |.-|.-+.+
T Consensus       322 tl~~crrAlkDaGV~~~e~~~VvmVGGST---Rvp~Vr~~VaelFg~~PL~--~ldPD---~VVAlGAAiQAd~LaGNk~  393 (628)
T TIGR01991       322 TLLPCRRALKDAGVEKEEVKGVVMVGGST---RVPKVREAVAELFGREPLT--DLDPD---KVVALGAAIQADVLAGNKR  393 (628)
T ss_pred             HHHHHHHHHHHCCCCHHHCCEEEEECCCC---CHHHHHHHHHHHHCCCCCC--CCCCC---HHHHHHHHHHHHHHCCCCC
T ss_conf             21678888875278832532657862654---6167999998863778788--88751---4246558998755326888


Q ss_pred             CCCCEE-------EEECCCC----CCCCCC--CCCC----CCCCCCCCCEEEEEC
Q ss_conf             565316-------7630224----322245--6632----323454431234402
Q gi|254780497|r  132 VRRVMV-------IGSDTFS----RIVDWS--DRST----CVLFGDGAGALILEG  169 (324)
Q Consensus       132 ~~~~Lv-------v~~e~~S----~~~d~~--d~~~----~~lfGDGAaA~ll~~  169 (324)
                      ..--|+       .+-|++-    +++...  -|..    ..+|=||=+|+.+--
T Consensus       394 ~~elLLLDV~PLSLGlETmGGL~EKiIPRN~tiP~ARAQ~FTTFKDgQTAM~IhV  448 (628)
T TIGR01991       394 DEELLLLDVIPLSLGLETMGGLMEKIIPRNSTIPVARAQDFTTFKDGQTAMVIHV  448 (628)
T ss_pred             CCCEEHHCCCCHHCCHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEE
T ss_conf             8640011012111002320673566527862998512665545455852668876


No 254
>TIGR01921 DAP-DH diaminopimelate dehydrogenase; InterPro: IPR010190   This entry represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine biosynthesis in Corynebacterium, Bacterioides, Porphyromonas and other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterised ..
Probab=50.00  E-value=19  Score=16.28  Aligned_cols=117  Identities=24%  Similarity=0.312  Sum_probs=67.5

Q ss_pred             CCEE--EEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEE
Q ss_conf             9226--99999996498411788999880999878110247518898289889999999999999974021235443366
Q gi|254780497|r    1 MIRS--TVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLII   78 (324)
Q Consensus         1 M~~~--~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii   78 (324)
                      |.++  .|.|+|=      +.. ..++.+...+..  +..||-+|+=+.    +.+.|.+++.-+..++--.-++||++|
T Consensus         1 M~kiRaaIVGYGN------lG~-~V~~ai~~~PDm--Elvgv~~Rrd~~----t~~va~~~~vy~V~~~~K~~~dvdv~i   67 (326)
T TIGR01921         1 MSKIRAAIVGYGN------LGK-SVEEAIQQAPDM--ELVGVFRRRDAE----TLDVAEELAVYAVVEDEKELEDVDVLI   67 (326)
T ss_pred             CCEEEEEEECCCC------HHH-HHHHHHHCCCCC--EEEEEEEECCCC----CCCHHHCCCHHHHHHHHHCCCCEEEEE
T ss_conf             9705788862232------007-999998408980--489988707887----576112252022222232028825999


Q ss_pred             EECCCCC---CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf             5012233---45898531001122026864444210122003467888998964155653167630
Q gi|254780497|r   79 VATSTPD---QTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSD  141 (324)
Q Consensus        79 ~~s~~~~---~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e  141 (324)
                      .|+-|.-   +.-|..|..+      ...=+||+...-.-+-.+|+.|..     ..++|=||++-
T Consensus        68 LC~gsatd~pe~~p~fA~~~------nTvDsfD~H~~Ip~~r~~~DaaA~-----~~g~VSvis~G  122 (326)
T TIGR01921        68 LCTGSATDLPEQKPYFAAFI------NTVDSFDIHTDIPDLRRTLDAAAK-----EAGAVSVISAG  122 (326)
T ss_pred             ECCCCCCCCCCCCCCCEEEE------ECCCCCCCCCCHHHHHHHHHHHHH-----HCCCEEEEEEC
T ss_conf             73886455543451001221------012365022420789999999998-----61987899834


No 255
>PRK02628 nadE NAD synthetase; Reviewed
Probab=48.21  E-value=17  Score=16.48  Aligned_cols=53  Identities=15%  Similarity=0.114  Sum_probs=27.9

Q ss_pred             HHHHHHHHCCCCCCCCCCC-CCC----CHHHHHHHHHHCCCCHH-----HH-HHHHHHHCCCHH
Q ss_conf             8889874001000121024-444----41589999997197876-----73-365865193301
Q gi|254780497|r  232 EKVFDSTHLTIENIDWFVP-HQA----NWRIINSIVDKMKIPFD-----KV-IVTVDIHGNTSA  284 (324)
Q Consensus       232 ~~~L~~~gl~~~did~~~~-Hq~----~~~~~~~~~~~lgl~~e-----~~-~~~~~~~Gn~~s  284 (324)
                      -.+++..|+..++|--+.+ -+.    +..--..+++.||+...     .. ...+..+||...
T Consensus       383 a~A~d~Lg~~r~~V~~vtMPs~~TS~~S~~dA~~La~~LGi~~~~I~I~~a~~~~~~di~~~~~  446 (678)
T PRK02628        383 AKAFDRLGLPRKNILAYTMPGFGTTDRTKNNAVALMKALGVTAREIDIRPAALQMLKDIGHPFA  446 (678)
T ss_pred             HHHHHHHCCCHHCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCHHH
T ss_conf             9999984897122489977887657878999999999729977997629999999998444222


No 256
>KOG2509 consensus
Probab=47.98  E-value=20  Score=16.08  Aligned_cols=21  Identities=24%  Similarity=0.417  Sum_probs=9.7

Q ss_pred             HHHHHHHHHHHHHHCCCCCCC
Q ss_conf             012699999999980688999
Q gi|254780497|r  283 SAASIPLALAVAVKEGRVKKG  303 (324)
Q Consensus       283 ~sas~~~~L~~~~~~g~l~~G  303 (324)
                      ..+.++=+|-..+++-+-+.|
T Consensus       402 TacA~~R~l~aiLEnyQ~edG  422 (455)
T KOG2509         402 TACATPRALCAILENYQTEDG  422 (455)
T ss_pred             HHHHHHHHHHHHHHHCCCCCC
T ss_conf             667646788776753467788


No 257
>PRK12338 hypothetical protein; Provisional
Probab=47.94  E-value=20  Score=16.07  Aligned_cols=43  Identities=7%  Similarity=0.214  Sum_probs=25.7

Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCC-------CC---CHHHHHHHHHHCCCCHHH
Q ss_conf             77888898740010001210244-------44---415899999971978767
Q gi|254780497|r  229 ELIEKVFDSTHLTIENIDWFVPH-------QA---NWRIINSIVDKMKIPFDK  271 (324)
Q Consensus       229 ~~i~~~L~~~gl~~~did~~~~H-------q~---~~~~~~~~~~~lgl~~e~  271 (324)
                      +.....+.++|-+..||.|-+|-       +.   ...-.+.+.+.|+=.+++
T Consensus       221 ~~e~eII~~~~~~i~dI~y~ipgfk~pl~r~v~v~d~~e~d~Fik~ln~~p~~  273 (320)
T PRK12338        221 DVEDEIIKENNGRITDISYPIPGFKDPLKRSVNIYDRDEADKFIKILNEEKKS  273 (320)
T ss_pred             HHHHHHHHHCCCEEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHCCHHH
T ss_conf             88789999739758751002887574312344778707899999998308556


No 258
>TIGR02810 agaZ_gatZ D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit; InterPro: IPR012062   Escherichia coli and other enteric bacteria contain two closely related D-tagatose 1,6-bisphosphate (TagBP)-specific aldolases involved in catabolism of galactitol (genes gatY gatZ) and of N-acetyl-galactosamine and D-galactosamine (genes kbaY, kbaZ, also called agaY, agaZ). The catalytic subunits GatY/KbaY alone are sufficient to show aldolase activity and contain most or all of the residues that have been identified as essential in substrate/product recognition and catalysis for class II aldolases , . However, these aldolases differ from other Class II aldolases (which are homodimeric enzymes) in that they require subunits GatZ/KbaZ for full activity and for good in vivo and in vitro stability. The Z subunits alone do not show any aldolase activity . It should be noted that the previous suggestion of a tagatose 6P-kinase function for AgaZ  and other members of this family turned out to be erroneous , .; GO: 0009024 tagatose-6-phosphate kinase activity, 0019402 galactitol metabolic process.
Probab=46.98  E-value=6.1  Score=19.37  Aligned_cols=60  Identities=22%  Similarity=0.306  Sum_probs=27.9

Q ss_pred             CCCCEEEEE-----CCC---CCHHHHHHHHHHHH------HH-HHCCCCCCCCEEEEECCCCCCCCCCC-------CCCH
Q ss_conf             475188982-----898---89999999999999------97-40212354433665012233458985-------3100
Q gi|254780497|r   38 VGISRRHIA-----GKD---ETTASLGEAAARDA------LH-HAEMSVDDIDLIIVATSTPDQTFPST-------AVNI   95 (324)
Q Consensus        38 ~GI~~R~~~-----~~~---e~~~~la~~Aa~~a------l~-~a~~~~~~Id~ii~~s~~~~~~~p~~-------a~~i   95 (324)
                      -|.++=|.=     ..|   .+..++|.+|||-|      .. +.|-.  ++-+|| +|..   ++|+=       |..-
T Consensus       115 AGF~KIHLDaSM~CagDP~PL~D~t~A~RAArLc~VAE~a~~~~~ge~--~p~YVI-GTEV---PvPGGetGGDaDA~e~  188 (430)
T TIGR02810       115 AGFTKIHLDASMSCAGDPIPLPDATIAERAARLCAVAEAAATEERGET--KPVYVI-GTEV---PVPGGETGGDADALEA  188 (430)
T ss_pred             HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC--CCCEEE-EEEE---CCCCCCCCCCHHHHHH
T ss_conf             588501011664578878663605789999999999999987422788--850365-1022---4887888765046766


Q ss_pred             HHH--HHCCC
Q ss_conf             112--20268
Q gi|254780497|r   96 QNR--LGMKR  103 (324)
Q Consensus        96 ~~~--LGl~~  103 (324)
                      ...  |-.+.
T Consensus       189 l~~hel~VT~  198 (430)
T TIGR02810       189 LQEHELAVTT  198 (430)
T ss_pred             HHCCCCCCCC
T ss_conf             5304778888


No 259
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=45.77  E-value=17  Score=16.47  Aligned_cols=60  Identities=23%  Similarity=0.065  Sum_probs=38.8

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC----------CCCCCHHHHHHCCCCC---CCCCCCC
Q ss_conf             99999999999997402123544336650122334589----------8531001122026864---4442101
Q gi|254780497|r   52 TASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFP----------STAVNIQNRLGMKRGF---AFDMQAV  112 (324)
Q Consensus        52 ~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p----------~~a~~i~~~LGl~~~~---~~di~~~  112 (324)
                      ...+-++|++.++++.++.|+||+.|.|...+- ...|          ....+|+++.|++...   .-|+-.|
T Consensus        71 l~~~~a~av~~ll~~~~l~~~~i~~iG~HGQTV-~H~p~~~~~~t~Qlgd~~~iA~~TGi~~v~dfR~~D~a~G  143 (371)
T COG2377          71 LALLHAQAVAALLAEQGLLPRDIRAIGCHGQTV-LHRPPGHAPDTVQLGDGPLIAELTGITVVGDFRRRDMAAG  143 (371)
T ss_pred             HHHHHHHHHHHHHHHCCCCHHHCCEEECCCCCC-CCCCCCCCCEEEECCCHHHHHHHHCCCCHHHHCCCCCCCC
T ss_conf             999999999999997299977682640478422-5789988880223486377799869764766123344568


No 260
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria.  The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=45.71  E-value=22  Score=15.86  Aligned_cols=28  Identities=7%  Similarity=0.055  Sum_probs=13.4

Q ss_pred             HHHHHHHHHHHH-CCCCCCEEEEECCCCC
Q ss_conf             467888998964-1556531676302243
Q gi|254780497|r  118 YAVTTADSYIRS-GVVRRVMVIGSDTFSR  145 (324)
Q Consensus       118 ~al~~A~~li~~-g~~~~~Lvv~~e~~S~  145 (324)
                      -.+.+|..+-+. ....+=||++++..+.
T Consensus        92 D~~~tA~~La~~i~~~~~DLIl~G~~s~D  120 (202)
T cd01714          92 DTLATAKALAAAIKKIGVDLILTGKQSID  120 (202)
T ss_pred             CHHHHHHHHHHHHHHCCCCEEEEEEECCC
T ss_conf             98999999999998759988999545457


No 261
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=45.25  E-value=22  Score=15.81  Aligned_cols=12  Identities=17%  Similarity=0.086  Sum_probs=7.2

Q ss_pred             CCCEEEEECCCC
Q ss_conf             653167630224
Q gi|254780497|r  133 RRVMVIGSDTFS  144 (324)
Q Consensus       133 ~~~Lvv~~e~~S  144 (324)
                      .+=||+++...+
T Consensus       112 ~~DLVl~G~~s~  123 (256)
T PRK03359        112 GFDLILCGDGSS  123 (256)
T ss_pred             CCCEEEEECCCC
T ss_conf             999999925102


No 262
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=44.73  E-value=23  Score=15.76  Aligned_cols=54  Identities=20%  Similarity=0.325  Sum_probs=40.3

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCCC---------HHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf             777777888898740010001210244444---------1589999997197876733658651
Q gi|254780497|r  225 EKAVELIEKVFDSTHLTIENIDWFVPHQAN---------WRIINSIVDKMKIPFDKVIVTVDIH  279 (324)
Q Consensus       225 ~~~~~~i~~~L~~~gl~~~did~~~~Hq~~---------~~~~~~~~~~lgl~~e~~~~~~~~~  279 (324)
                      ......+...|++.|.+.++| +++||.+.         .-|+..+.+..++..++.+.+-++.
T Consensus        70 ~~~~~~m~~~l~~~gv~id~i-~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~  132 (181)
T COG0241          70 DKLHNKMLKILASQGVKIDGI-LYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRL  132 (181)
T ss_pred             HHHHHHHHHHHHHCCCCCCEE-EECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCH
T ss_conf             989999999999749703649-987889877776669975899999998288822017840768


No 263
>TIGR02350 prok_dnaK chaperone protein DnaK; InterPro: IPR012725    Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolysing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. In prokaryotes, the grpE protein is a co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold . DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle.    Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for the Mycoplasma sequence) found clustered with other genes of this systems. This entry excludes DnaK homologues that are not DnaK itself, such as the heat shock cognate protein HscA (IPR010236 from INTERPRO). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of DnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; the lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.; GO: 0005524 ATP binding, 0051082 unfolded protein binding, 0006457 protein folding.
Probab=44.41  E-value=23  Score=15.73  Aligned_cols=72  Identities=19%  Similarity=0.263  Sum_probs=32.8

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH---HHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
Q ss_conf             55777777788889874001000121024444415---899999971978767336586519330126999999999806
Q gi|254780497|r  222 YAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWR---IINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEG  298 (324)
Q Consensus       222 ~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~---~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g  298 (324)
                      ..+.....-++++|.+++++++|||.+++==++-+   +.+.+.+.+|-.+.+.++          .|=.+++=.|++.|
T Consensus       303 dLv~~~~~p~~~aL~DA~l~~~~I~~v~LVGG~TRiP~V~~~V~~~~GK~p~~~vN----------PDEvVAiGAAiQgG  372 (598)
T TIGR02350       303 DLVERTKEPVRQALKDAGLSASDIDEVILVGGSTRIPAVQELVKEFFGKEPNKSVN----------PDEVVAIGAAIQGG  372 (598)
T ss_pred             HHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC----------CHHHHHHHHHHHHH
T ss_conf             99999899999999753788436666898558841248999999872988788888----------05888887888754


Q ss_pred             CCCCCC
Q ss_conf             889998
Q gi|254780497|r  299 RVKKGD  304 (324)
Q Consensus       299 ~l~~Gd  304 (324)
                      .|+ ||
T Consensus       373 VL~-Gd  377 (598)
T TIGR02350       373 VLK-GD  377 (598)
T ss_pred             HCC-CC
T ss_conf             317-87


No 264
>pfam02887 PK_C Pyruvate kinase, alpha/beta domain. As well as being found in pyruvate kinase this family is found as an isolated domain in some bacterial proteins.
Probab=44.16  E-value=23  Score=15.70  Aligned_cols=25  Identities=44%  Similarity=0.531  Sum_probs=17.2

Q ss_pred             HHHHHHHHHHCCCCCCCCEEEEEEE
Q ss_conf             9999999998068899989999997
Q gi|254780497|r  287 IPLALAVAVKEGRVKKGDCLLLEAM  311 (324)
Q Consensus       287 ~~~~L~~~~~~g~l~~Gd~vll~~~  311 (324)
                      +-.++..+.+.|.+++||++++++-
T Consensus        77 i~~a~~~l~~~g~~~~GD~vVvv~G  101 (117)
T pfam02887        77 IAEALRVAKDAGLIKKGDLVVVTAG  101 (117)
T ss_pred             HHHHHHHHHHCCCCCCCCEEEEEEC
T ss_conf             9999999998699999998999846


No 265
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=43.52  E-value=14  Score=17.03  Aligned_cols=80  Identities=11%  Similarity=0.143  Sum_probs=34.0

Q ss_pred             HHHHHHHHCCCCCCCCEEEEECC-CCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHH-HHHHHHHHHCCCCCCE
Q ss_conf             99999740212354433665012-233458985310011220268-64444210122003467-8889989641556531
Q gi|254780497|r   60 ARDALHHAEMSVDDIDLIIVATS-TPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAV-TTADSYIRSGVVRRVM  136 (324)
Q Consensus        60 a~~al~~a~~~~~~Id~ii~~s~-~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al-~~A~~li~~g~~~~~L  136 (324)
                      +++.+.+.|++++.|  .+++-- .+.+..+.....+.+++|+++ ....=|.+|=.|.+..+ .++..+..... -.++
T Consensus       158 ~k~~l~~~Gv~~~kI--~vtGiPVr~~F~~~~~k~~~r~~lgL~~d~~~vLimgGg~G~~g~i~~l~~~L~~~~~-~qii  234 (388)
T PRK13609        158 VKEVMVDIGVPAEQI--VETGIPIRSSFELKINPDIIYNKYQLCKNKKILLIVAGAHGVLGNVKELCQSFMSVPD-LQVV  234 (388)
T ss_pred             HHHHHHHHCCCHHHE--EEECCCCCHHHCCCCCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCC-CEEE
T ss_conf             999999809988899--9889843878727588789999828998784799976601211479999999745899-2499


Q ss_pred             EEEECC
Q ss_conf             676302
Q gi|254780497|r  137 VIGSDT  142 (324)
Q Consensus       137 vv~~e~  142 (324)
                      |||+-+
T Consensus       235 VVcGrN  240 (388)
T PRK13609        235 VVCGKN  240 (388)
T ss_pred             EEECCC
T ss_conf             990899


No 266
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=43.40  E-value=24  Score=15.63  Aligned_cols=28  Identities=11%  Similarity=0.107  Sum_probs=18.7

Q ss_pred             EEEEEEEEECCCCEECHHHHHHHHCCCHHH
Q ss_conf             699999996498411788999880999878
Q gi|254780497|r    4 STVRGIGLSLPRRVLSNSDLESIVDTSDGW   33 (324)
Q Consensus         4 ~~I~~~g~ylP~~~v~~~el~~~~~~~~~~   33 (324)
                      ..|..+.-|.|...+  ++++++++..++.
T Consensus         9 ~~~~~~~~y~~g~~~--~~~a~~~g~~~~~   36 (369)
T PRK00950          9 AIVKEIKEYVPGKSK--EEIARNYGIDPES   36 (369)
T ss_pred             HHHHCCCCCCCCCCH--HHHHHHCCCCCCC
T ss_conf             886379998999999--9999980989689


No 267
>KOG1015 consensus
Probab=43.37  E-value=17  Score=16.62  Aligned_cols=91  Identities=13%  Similarity=0.208  Sum_probs=55.4

Q ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEE----ECCC--CCCCCCCCCCCHHHHHHCCCCCCCCCCCC
Q ss_conf             75188982898899999999999999740212354433665----0122--33458985310011220268644442101
Q gi|254780497|r   39 GISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIV----ATST--PDQTFPSTAVNIQNRLGMKRGFAFDMQAV  112 (324)
Q Consensus        39 GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~----~s~~--~~~~~p~~a~~i~~~LGl~~~~~~di~~~  112 (324)
                      +|++-.+.++++.+-.-+++.-+.++.+  +.|-+++-|=|    |..+  .-.-.|+..+.+++-+||..++  +    
T Consensus       641 ~it~~lVld~deet~e~~VqV~rslv~k--LKpHQv~GvqFMwd~~~eSlkr~~~~~GsGcILAHcMGLGKTl--Q----  712 (1567)
T KOG1015         641 PITTKLVLDEDEETKEPLVQVHRSLVIK--LKPHQVDGVQFMWDCCCESLKRTKKSPGSGCILAHCMGLGKTL--Q----  712 (1567)
T ss_pred             CCCEEEEECCHHHHCCCHHHCCHHHHHH--CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEE--H----
T ss_conf             5310378544143042202145767764--4722013025899999999886127998631778750456400--1----


Q ss_pred             CCCHHHHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf             22003467888998964155653167630
Q gi|254780497|r  113 CSGFVYAVTTADSYIRSGVVRRVMVIGSD  141 (324)
Q Consensus       113 C~~~~~al~~A~~li~~g~~~~~Lvv~~e  141 (324)
                      -..|++.+.+...   . ..++||||+.=
T Consensus       713 VvtflhTvL~c~k---l-g~ktaLvV~Pl  737 (1567)
T KOG1015         713 VVTFLHTVLLCDK---L-GFKTALVVCPL  737 (1567)
T ss_pred             HHHHHHHHHHHHC---C-CCCEEEEECCH
T ss_conf             4678889987420---4-78568997235


No 268
>PRK11921 metallo-beta-lactamase/flavodoxin domain-containing protein; Provisional
Probab=42.46  E-value=24  Score=15.54  Aligned_cols=19  Identities=26%  Similarity=0.534  Sum_probs=16.1

Q ss_pred             CCCCCCCEEEEECCCCCCC
Q ss_conf             1235443366501223345
Q gi|254780497|r   69 MSVDDIDLIIVATSTPDQT   87 (324)
Q Consensus        69 ~~~~~Id~ii~~s~~~~~~   87 (324)
                      ++|++||.||..+.-||..
T Consensus        65 i~~~~IdYiVvnH~EPDHs   83 (395)
T PRK11921         65 IDLDKIDYIVANHGEIDHS   83 (395)
T ss_pred             CCCCCCCEEEECCCCCCHH
T ss_conf             5965699999389997578


No 269
>KOG2708 consensus
Probab=42.28  E-value=17  Score=16.49  Aligned_cols=91  Identities=20%  Similarity=0.348  Sum_probs=46.2

Q ss_pred             HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCC-CCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC----
Q ss_conf             99999999740212354433665012233458985-3100112202686444421012200346788899896415----
Q gi|254780497|r   57 EAAARDALHHAEMSVDDIDLIIVATSTPDQTFPST-AVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGV----  131 (324)
Q Consensus        57 ~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~-a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~----  131 (324)
                      .--++++|++++++++|||.+.|.. -|..-.|-. .+.+++-|-+          -|.--+.+...+-..|+.|+    
T Consensus        54 l~Lv~~al~ea~v~~~diD~icyTK-GPGmgaPL~~vaivaRtlsl----------lw~kPlv~VNHCigHIEMGR~iTg  122 (336)
T KOG2708          54 LGLVKQALEEAGVTSDDIDCICYTK-GPGMGAPLSVVAIVARTLSL----------LWNKPLVGVNHCIGHIEMGREITG  122 (336)
T ss_pred             HHHHHHHHHHCCCCHHHCCEEEECC-CCCCCCCHHHHHHHHHHHHH----------HHCCCCCCCHHHHHHHHHCCEECC
T ss_conf             9999999987399752287899727-89878762668999999999----------827983230121111322102216


Q ss_pred             -CC-CCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf             -56-531676302243222456632323454
Q gi|254780497|r  132 -VR-RVMVIGSDTFSRIVDWSDRSTCVLFGD  160 (324)
Q Consensus       132 -~~-~~Lvv~~e~~S~~~d~~d~~~~~lfGD  160 (324)
                       .+ .+|-|++-+ +..+-|+.+. +-+||.
T Consensus       123 A~nPvvLYvSGGN-TQvIAYse~r-YrIFGE  151 (336)
T KOG2708         123 AQNPVVLYVSGGN-TQVIAYSEKR-YRIFGE  151 (336)
T ss_pred             CCCCEEEEEECCC-EEEEEECCCE-EEEECC
T ss_conf             8897799990796-6999971541-454032


No 270
>PRK05452 anaerobic nitric oxide reductase flavorubredoxin; Provisional
Probab=40.78  E-value=26  Score=15.38  Aligned_cols=20  Identities=30%  Similarity=0.635  Sum_probs=16.8

Q ss_pred             CCCCCCCCEEEEECCCCCCC
Q ss_conf             21235443366501223345
Q gi|254780497|r   68 EMSVDDIDLIIVATSTPDQT   87 (324)
Q Consensus        68 ~~~~~~Id~ii~~s~~~~~~   87 (324)
                      -+++++||.||..+.-||..
T Consensus        66 ~id~~~IDYIIvnH~EpDHS   85 (479)
T PRK05452         66 EIDLADIDYIVINHAEEDHA   85 (479)
T ss_pred             HCCCCCCCEEEECCCCCCHH
T ss_conf             45966798899689997547


No 271
>TIGR01485 SPP_plant-cyano sucrose phosphatase; InterPro: IPR012847   This entry describes the sucrose phosphate phosphohydrolase from plants and cyanobacteria (SPP). However, a closely related group of sequences from bacteria and archaea may prove to catalyze the same reaction. SPP is a member of the Class IIB subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants.    Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain, which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain..
Probab=38.98  E-value=28  Score=15.20  Aligned_cols=53  Identities=19%  Similarity=0.422  Sum_probs=38.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCC-------CCCCCCCCCCCCH-HHHHHHHHHCCCC---HHHHHH
Q ss_conf             4557777777888898740010-------0012102444441-5899999971978---767336
Q gi|254780497|r  221 KYAVEKAVELIEKVFDSTHLTI-------ENIDWFVPHQANW-RIINSIVDKMKIP---FDKVIV  274 (324)
Q Consensus       221 ~~~~~~~~~~i~~~L~~~gl~~-------~did~~~~Hq~~~-~~~~~~~~~lgl~---~e~~~~  274 (324)
                      +.....+.+.+.+.|++.|+..       .|+| ++||-+++ ..+..+.++|.+.   |+++..
T Consensus       131 ~~~~~~V~~~L~~~L~~~g~~vk~iYSsG~dlD-ilP~~s~KG~A~~YL~~kL~~~GK~p~~TlV  194 (257)
T TIGR01485       131 KEAAAEVIKQLEEELKKSGLDVKLIYSSGKDLD-ILPQGSGKGQALQYLLQKLKIEGKQPSQTLV  194 (257)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEE-EECCCCCHHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf             565468999899888742897589975882377-5027788567999999999843889777178


No 272
>cd04333 ProX_deacylase This CD, composed mainly of bacterial single-domain proteins, includes the Thermus thermophilus (Tt) YbaK-like protein, a homolog of the trans-acting Escherichia coli YbaK Cys-tRNA(Pro) deacylase and the Agrobacterium tumefaciens  ProX Ala-tRNA(Pro) deacylase and also the cis-acting prolyl-tRNA synthetase-editing domain (ProRS-INS). While ProX and ProRS-INS hydrolyze misacylated Ala-tRNA(Pro), the E. coli YbaK hydrolyzes misacylated Cys-tRNA(Pro). A few CD members are N-terminal, YbaK-ProX-like domains of an uncharacterized protein with a C-terminal, predicted Fe-S protein domain.
Probab=38.96  E-value=26  Score=15.32  Aligned_cols=10  Identities=20%  Similarity=0.202  Sum_probs=3.7

Q ss_pred             HHHHHHHHCC
Q ss_conf             9999974021
Q gi|254780497|r   60 ARDALHHAEM   69 (324)
Q Consensus        60 a~~al~~a~~   69 (324)
                      +++.|++.|+
T Consensus         4 v~~~L~~~gi   13 (148)
T cd04333           4 VRAFLAARGL   13 (148)
T ss_pred             HHHHHHHCCC
T ss_conf             9999997699


No 273
>pfam12244 DUF3606 Protein of unknown function (DUF3606). This family of proteins is found in bacteria. Proteins in this family are typically between 58 and 85 amino acids in length. There is a single completely conserved residue G that may be functionally important.
Probab=38.85  E-value=28  Score=15.19  Aligned_cols=42  Identities=7%  Similarity=0.054  Sum_probs=30.3

Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCH
Q ss_conf             01000121024444415899999971978767336586519330
Q gi|254780497|r  240 LTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHGNTS  283 (324)
Q Consensus       240 l~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~  283 (324)
                      ..+.|-+++-+++  ..-.+.|+++||+++++.-.-+...||..
T Consensus         7 ~~~~Dr~~I~~~e--~~ev~yW~~~~gvt~~~L~~AV~~vG~~~   48 (57)
T pfam12244         7 RGPQDRSRINLNE--EYEVKYWAKRLGVSEEQLKAAVRKVGNSA   48 (57)
T ss_pred             CCCCCHHHCCCCC--HHHHHHHHHHHCCCHHHHHHHHHHHCCCH
T ss_conf             5887423067675--89999999997949999999999988569


No 274
>PRK12342 putative electron transfer flavoprotein YdiQ; Provisional
Probab=38.65  E-value=28  Score=15.17  Aligned_cols=11  Identities=0%  Similarity=-0.170  Sum_probs=6.7

Q ss_pred             CCCEEEEECCC
Q ss_conf             65316763022
Q gi|254780497|r  133 RRVMVIGSDTF  143 (324)
Q Consensus       133 ~~~Lvv~~e~~  143 (324)
                      .+=||+++...
T Consensus       109 ~~DLVl~G~~s  119 (254)
T PRK12342        109 GFDLLLFGEGS  119 (254)
T ss_pred             CCCEEEEECCC
T ss_conf             96999993621


No 275
>PRK03910 D-cysteine desulfhydrase; Validated
Probab=38.41  E-value=28  Score=15.14  Aligned_cols=32  Identities=25%  Similarity=0.401  Sum_probs=27.3

Q ss_pred             CHHHHHHHHHHHHHHCCCCCCCCEEEEEEECC
Q ss_conf             30126999999999806889998999999714
Q gi|254780497|r  282 TSAASIPLALAVAVKEGRVKKGDCLLLEAMGG  313 (324)
Q Consensus       282 ~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~  313 (324)
                      ++++-.+.+|.+++++|.+.+|++|+++=.|.
T Consensus       287 vYTgKa~~gl~~li~~g~i~~g~~Vv~ihTGG  318 (331)
T PRK03910        287 VYTGKAMAGLIDLIRKGRFKDGGNVLFIHTGG  318 (331)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
T ss_conf             26799999999999849989989299998996


No 276
>TIGR00014 arsC arsenate reductase; InterPro: IPR006659   This entry describes a distinct clade, including ArsC itself, of the broader family of ArsC and related proteins. This clade is almost completely restricted to the proteobacteria. An anion-translocating ATPase has been identified as the product of the arsenical resistance operon of resistance plasmid R773 . When expressed in Escherichia coli this ATP-driven oxyanion pump catalyses extrusion of the oxyanions arsenite, antimonite and arsenate. The pump is composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate. ; GO: 0008794 arsenate reductase (glutaredoxin) activity, 0006118 electron transport.
Probab=38.04  E-value=29  Score=15.11  Aligned_cols=44  Identities=9%  Similarity=0.211  Sum_probs=34.8

Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHH-HHH
Q ss_conf             788889874001000121024444415899999971978767-336
Q gi|254780497|r  230 LIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDK-VIV  274 (324)
Q Consensus       230 ~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~-~~~  274 (324)
                      ..-.+|++.|+.|+=|.| +=.|++++-++.+.++||+++-| ...
T Consensus        14 ~tLalL~dkgi~P~vV~Y-L~~pp~~seL~~~~~~LG~~~ar~~~R   58 (114)
T TIGR00014        14 QTLALLEDKGIEPEVVKY-LKNPPTKSELKALLAKLGISSAREMIR   58 (114)
T ss_pred             HHHHHHHHCCCCCEEEEC-CCCCCCHHHHHHHHHHCCCCHHHHHCC
T ss_conf             999999856999547414-589748688999998708970363011


No 277
>TIGR01341 aconitase_1 aconitate hydratase 1; InterPro: IPR006249   Aconitase (aconitate hydratase; 4.2.1.3 from EC) is an iron-sulphur protein that contains a [4Fe-4S]-cluster and catalyses the interconversion of isocitrate and citrate via a cis-aconitate intermediate. Aconitase functions in both the TCA and glyoxylate cycles, however unlike the majority of iron-sulphur proteins that function as electron carriers, the [4Fe-4S]-cluster of aconitase reacts directly with an enzyme substrate. In eukaryotes there is a cytosolic form (cAcn) and a mitochondrial form (mAcn) of the enzyme. In bacteria there are also 2 forms, aconitase A (AcnA) and B (AcnB). Several aconitases are known to be multi-functional enzymes with a second non-catalytic, but essential function that arises when the cellular environment changes, such as when iron levels drop , . Eukaryotic cAcn and mAcn, and bacterial AcnA have the same domain organisation, consisting of three N-terminal alpha/beta/alpha domains, a linker region, followed by a C-terminal 'swivel' domain with a beta/beta/alpha structure (1-2-3-linker-4), although mAcn is small than cAcn. However, bacterial AcnB has a different organisation: it contains an N-terminal HEAT-like domain, followed by the 'swivel' domain, then the three alpha/beta/alpha domains (HEAT-4-1-2-3) . Below is a description of some of the multi-functional activities associated with different aconitases.   Eukaryotic mAcn catalyses the second step of the mitochondrial TCA cycle, which is important for energy production, providing high energy electrons in the form of NADH and FADH2 to the mitochondrial oxidative phosphorylation pathway . The TCA cycle also provides precursors for haem and amino acid production. This enzyme has a second, non-catalytic but essential role in mitochondrial DNA (mtDNA) maintenance: mAcn acts to stabilise mtDNA, forming part of mtDNA protein-DNA complexes known as nucleoids. mAcn is thought to reversibly model nucleoids to directly influence mitochondrial gene expression in response to changes in the cellular environment. Therefore, mAcn can influence the expression of components of the oxidative phosphorylation pathway encoded in mtDNA.    Eukaryotic cAcn enzyme balances the amount of citrate and isocitrate in the cytoplasm, which in turn creates a balance between the amount of NADPH generated from isocitrate by isocitrate dehydrogenase with the amount of acetyl-CoA generated from citrate by citrate lyase. Fatty acid synthesis requires both NADPH and acetyl-CoA, as do other metabolic processes, including the need for NADPH to combat oxidative stress. The enzymatic form of cAcn predominates when iron levels are normal, but if they drop sufficiently to cause the disassembly of the [4Fe-4S]-cluster, then cAcn undergoes a conformational change from a compact enzyme to a more open L-shaped protein known as iron regulatory protein 1 (IRP1; or IRE-binding protein 1, IREBP1) , . As IRP1, the catalytic site and the [4Fe-4S]-cluster are lost, and two new RNA-binding sites appear. IRP1 functions in the post-transcriptional regulation of genes involved in iron metabolism - it binds to mRNA iron-responsive elements (IRE), 30-nucleotide stem-loop structures at the 3' or 5' end of specific transcripts. Transcripts containing an IRE include ferritin L and H subunits (iron storage), transferrin (iron plasma chaperone), transferrin receptor (iron uptake into cells), ferroportin (iron exporter), mAcn, succinate dehydrogenase, erythroid aminolevulinic acid synthetase (tetrapyrrole biosynthesis), among others. If the IRE is in the 5'-UTR of the transcript (e.g. in ferritin mRNA), then IRP1-binding prevents its translation by blocking the transcript from binding to the ribosome. If the IRE is in the 3'-UTR of the transcript (e.g. transferrin receptor), then IRP1-binding protects it from endonuclease degradation, thereby prolonging the half-life of the transcript and enabling it to be translated .   IRP2 is another IRE-binding protein that binds to the same transcripts as IRP1. However, since IRP1 is predominantly in the enzymatic cAcn form, it is IRP2 that acts as the major metabolic regulator that maintains iron homeostasis . Although IRP2 is homologous to IRP1, IPR2 lacks aconitase activity, and is known only to have a single function in the post-transcriptional regulation of iron metabolism genes . In iron-replete cells, IRP2 activity is regulated primarily by iron-dependent degradation through the ubiquitin-proteasomal system.   Bacterial AcnB is also known to be multi-functional. In addition to its role in the TCA cycle, AcnB was shown to be a post-transcriptional regulator of gene expression in Escherichia coli and Salmonella enterica , . In S.enterica, AcnB initiates a regulatory cascade controlling flagella biosynthesis through an interaction with the ftsH transcript, an alternative RNA polymerase sigma factor. This binding lowers the intracellular concentration of FtsH protease, which in turn enhances the amount of RNA polymerase sigma32 factor (normally degraded by FtsH protease), and sigma32 then increases the synthesis of chaperone DnaK, which in turn promotes the synthesis of the flagellar protein FliC. AcnB regulates the synthesis of other proteins as well, such as superoxide dismutase (SodA) and other enzymes involved in oxidative stress.   This entry represents bacterial aconitase A (AcnA), eukaryotic cytosolic aconitase (cAcn/IRP1), iron regulatory protein 2 (IRP2), and a few mitochondrial aconitases (certain mAcn proteins, but not the majority of these enzymes).   More information about these proteins can be found at Protein of the Month: Aconitase .; GO: 0051539 4 iron 4 sulfur cluster binding, 0008152 metabolic process.
Probab=37.67  E-value=29  Score=15.07  Aligned_cols=70  Identities=21%  Similarity=0.257  Sum_probs=44.8

Q ss_pred             CCEECHHHHHHHHCCCHHHHHHCCCCCEE--EEECCCC----CHHHHHHHHHHHHHHHHCCCCCC------CCEEEEECC
Q ss_conf             84117889998809998781102475188--9828988----99999999999999740212354------433665012
Q gi|254780497|r   15 RRVLSNSDLESIVDTSDGWIKRRVGISRR--HIAGKDE----TTASLGEAAARDALHHAEMSVDD------IDLIIVATS   82 (324)
Q Consensus        15 ~~~v~~~el~~~~~~~~~~i~~~~GI~~R--~~~~~~e----~~~~la~~Aa~~al~~a~~~~~~------Id~ii~~s~   82 (324)
                      +..|+.+|++.+.++..+..++. -|..|  ||.=.|=    -.+|||  |.|+++++-|-||+-      +|+||=+|+
T Consensus        39 G~~i~~eD~e~i~~W~~~~~~d~-Ei~FkP~RV~mQDFTGVPAVVDLA--~mR~am~~LGgDp~kINP~vPVDLVIDHSV  115 (896)
T TIGR01341        39 GFSIKEEDVEAILKWKKEELKDV-EIAFKPARVVMQDFTGVPAVVDLA--AMRDAMKNLGGDPEKINPLVPVDLVIDHSV  115 (896)
T ss_pred             CCCCCHHHHHHHHCCCCCCCCCC-CCCCCCCEEEEECCCCCCHHHHHH--HHHHHHHHHCCCCCCCCCCCCCCEEECCCE
T ss_conf             84206789988844311354661-467564136752437872788889--999999982788120488765233775606


Q ss_pred             CCCCC
Q ss_conf             23345
Q gi|254780497|r   83 TPDQT   87 (324)
Q Consensus        83 ~~~~~   87 (324)
                      .=|+.
T Consensus       116 QVD~~  120 (896)
T TIGR01341       116 QVDYY  120 (896)
T ss_pred             EECCC
T ss_conf             75456


No 278
>COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]
Probab=37.20  E-value=28  Score=15.15  Aligned_cols=12  Identities=33%  Similarity=0.772  Sum_probs=5.3

Q ss_pred             CCCCCCCCCCHH
Q ss_conf             444210122003
Q gi|254780497|r  106 AFDMQAVCSGFV  117 (324)
Q Consensus       106 ~~di~~~C~~~~  117 (324)
                      .+|+..+|.|..
T Consensus        76 ~~~~v~v~~g~~   87 (328)
T COG4977          76 PIDILPVCGGLG   87 (328)
T ss_pred             CCEEEEEECCCC
T ss_conf             632999806877


No 279
>pfam01411 tRNA-synt_2c tRNA synthetases class II (A). Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only alanyl-tRNA synthetases.
Probab=36.98  E-value=30  Score=15.00  Aligned_cols=21  Identities=10%  Similarity=0.199  Sum_probs=11.7

Q ss_pred             HHHHH-HHHCCCCCCCCEEEEE
Q ss_conf             99999-7402123544336650
Q gi|254780497|r   60 ARDAL-HHAEMSVDDIDLIIVA   80 (324)
Q Consensus        60 a~~al-~~a~~~~~~Id~ii~~   80 (324)
                      +-+.| +.-+++|++|-..++.
T Consensus       102 a~e~lt~~l~i~~~~l~~t~~~  123 (545)
T pfam01411       102 AWELLTKELGLDPERLYVTVYE  123 (545)
T ss_pred             HHHHHHHHHCCCHHHEEEEECC
T ss_conf             9999765617886676999888


No 280
>pfam11294 DUF3095 Protein of unknown function (DUF3095). Some members in this bacterial family of proteins are annotated as adenylyl cyclase however this cannot be confirmed. Currently no function is known.
Probab=36.70  E-value=8.7  Score=18.39  Aligned_cols=16  Identities=19%  Similarity=0.260  Sum_probs=11.5

Q ss_pred             HHHHHHHHHHHCCCCC
Q ss_conf             6788899896415565
Q gi|254780497|r  119 AVTTADSYIRSGVVRR  134 (324)
Q Consensus       119 al~~A~~li~~g~~~~  134 (324)
                      +|..|...|+.+++..
T Consensus       146 GL~~AE~~mK~~~~~i  161 (373)
T pfam11294       146 GLAWAEALIKAGEYLI  161 (373)
T ss_pred             CHHHHHHHHHCCCCCC
T ss_conf             1899999971577457


No 281
>TIGR02684 dnstrm_HI1420 probable addiction module antidote protein; InterPro: IPR014057   Members of this strictly bacterial protein family are small, at roughly 100 amino acids. The gene is almost invariably the downstream member of a gene pair. It is a predicted DNA-binding protein from a clade within the helix-turn-helix family IPR001387 from INTERPRO. These gene pairs, when found on the bacterial chromosome, are located often with prophage regions, but also both in integrated plasmid regions and in housekeeping gene regions. Analysis suggests that the gene pair may serve as an addiction module..
Probab=36.48  E-value=26  Score=15.42  Aligned_cols=64  Identities=14%  Similarity=0.103  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHH
Q ss_conf             7777778888987400100012102444441589999997197876733658651933012699
Q gi|254780497|r  225 EKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIP  288 (324)
Q Consensus       225 ~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~  288 (324)
                      +.+...+.+++++.|=+|.-|-+-+-+=+-.+-+.+++++-||..|..+.-+..=||=.=.+++
T Consensus        15 E~~a~YL~~a~e~gGdDp~~~~~ALG~iArArGMtqlA~~tGlsREsLYkALs~~GnP~f~T~l   78 (91)
T TIGR02684        15 EEVAEYLAQALEDGGDDPALIAAALGVIARARGMTQLAKKTGLSRESLYKALSGGGNPTFDTIL   78 (91)
T ss_pred             HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHH
T ss_conf             8999999999743699988999998899865165789998287678878873568895668889


No 282
>cd01781 AF6_RA_repeat2 The AF-6 protein (also known as afadin and canoe) is a multidomain cell junction protein that contains two N-terminal Ras-associating (RA) domains in addition to FHA (forkhead-associated), DIL (class V myosin homology region), and PDZ domains and a proline-rich region. AF6 acts downstream of the Egfr (Epidermal Growth Factor-receptor)/Ras signalling pathway and provides a link from Egfr to cytoskeletal elements.
Probab=35.60  E-value=19  Score=16.28  Aligned_cols=30  Identities=10%  Similarity=0.179  Sum_probs=19.7

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             777777888898740010001210244444
Q gi|254780497|r  225 EKAVELIEKVFDSTHLTIENIDWFVPHQAN  254 (324)
Q Consensus       225 ~~~~~~i~~~L~~~gl~~~did~~~~Hq~~  254 (324)
                      .....++.++|++.|++.+|-+.|++.+.+
T Consensus        26 d~A~~vV~EaLekYgL~kedp~~YcLv~V~   55 (100)
T cd01781          26 DNADRIVGEALEKYGLEKSDPDDYCLVEVS   55 (100)
T ss_pred             CCHHHHHHHHHHHHCCCCCCHHHEEEEEEE
T ss_conf             569999999999848895882026999974


No 283
>TIGR02249 integrase_gron integron integrase; InterPro: IPR011946    Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family that also includes recombinases XerC (IPR011931 from INTERPRO) and XerD (IPR011932 from INTERPRO), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961.; GO: 0003677 DNA binding, 0006310 DNA recombination, 0015074 DNA integration.
Probab=35.43  E-value=26  Score=15.36  Aligned_cols=63  Identities=10%  Similarity=0.095  Sum_probs=35.7

Q ss_pred             HHHHHHHHHHHHHHCCCCC----CCC-CCCCCC-CHHHHHHHHHHCCCC---HHHHHHHHHHHCCCHHHHHH
Q ss_conf             7777788889874001000----121-024444-415899999971978---76733658651933012699
Q gi|254780497|r  226 KAVELIEKVFDSTHLTIEN----IDW-FVPHQA-NWRIINSIVDKMKIP---FDKVIVTVDIHGNTSAASIP  288 (324)
Q Consensus       226 ~~~~~i~~~L~~~gl~~~d----id~-~~~Hq~-~~~~~~~~~~~lgl~---~e~~~~~~~~~Gn~~sas~~  288 (324)
                      .+...++++-.++|+.+.=    +=| |.+|-. ++.-++.+++.||=.   .-++++-+=+-|-.|--||+
T Consensus       246 ~~QRav~~Av~~AGI~KpvTcHTLRHSFATHLLe~G~DIRTVQelLGHsDVkTTqIYTHVL~rG~~GV~SPL  317 (320)
T TIGR02249       246 TIQRAVRRAVERAGIEKPVTCHTLRHSFATHLLESGADIRTVQELLGHSDVKTTQIYTHVLNRGAAGVLSPL  317 (320)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCEECCCC
T ss_conf             432899999995789886788742122443056517736789886178842246345305145876205831


No 284
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=34.82  E-value=22  Score=15.83  Aligned_cols=69  Identities=19%  Similarity=0.278  Sum_probs=30.5

Q ss_pred             HHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCC-CCCCC
Q ss_conf             81102475188982898899999999999999740212354433665012233458985310011220268644-44210
Q gi|254780497|r   33 WIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFA-FDMQA  111 (324)
Q Consensus        33 ~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~-~di~~  111 (324)
                      .+.+.+|.+.---...+.+++.||.       .-.|+.|.  |-||+-+    +..++++.-|. ..|+++.++ .|-..
T Consensus        39 ~~a~~~g~~~av~v~sgT~AL~lal-------~~l~i~~g--deVivp~----~tf~at~~ai~-~~Ga~pvfvDid~~t  104 (375)
T PRK11706         39 WLEQRFGCAKVLLTPSCTAALEMAA-------LLLDIQPG--DEVIMPS----YTFVSTANAFV-LRGAKIVFVDIRPDT  104 (375)
T ss_pred             HHHHHHCCCEEEEECCHHHHHHHHH-------HHCCCCCC--CEEEECC----CCHHHHHHHHH-HCCCEEEEEEECCCC
T ss_conf             9999978493999678899999999-------98698893--9999899----66499999999-839969999716875


Q ss_pred             CCCC
Q ss_conf             1220
Q gi|254780497|r  112 VCSG  115 (324)
Q Consensus       112 ~C~~  115 (324)
                      .|..
T Consensus       105 ~~id  108 (375)
T PRK11706        105 MNID  108 (375)
T ss_pred             CCCC
T ss_conf             7767


No 285
>PRK03321 putative aminotransferase; Provisional
Probab=34.77  E-value=32  Score=14.78  Aligned_cols=67  Identities=12%  Similarity=0.187  Sum_probs=28.9

Q ss_pred             EEEEEEEECCCCEECHH-HH---HHHHCCCHHHHH---HCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE
Q ss_conf             99999996498411788-99---988099987811---024751889828988999999999999997402123544336
Q gi|254780497|r    5 TVRGIGLSLPRRVLSNS-DL---ESIVDTSDGWIK---RRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLI   77 (324)
Q Consensus         5 ~I~~~g~ylP~~~v~~~-el---~~~~~~~~~~i~---~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~i   77 (324)
                      -|..+..|.|.+.++.. +|   +.-++.++..++   +... .-.+|.+  ....+|-.+-++    ..+++|++|  +
T Consensus         8 ~i~~l~~Y~pg~~~~~~i~ls~Nenp~gp~p~v~~ai~~~~~-~~~~YPd--~~~~~Lr~aiA~----~~~v~~~~I--~   78 (352)
T PRK03321          8 ELAGLPAYVPGKTVPGAIKLSSNETPFGPLPSVRAAIAEATD-GLNRYPD--NGAVELRAALAE----HLGVAPEHV--A   78 (352)
T ss_pred             HHHCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHH-HCCCCCC--CCHHHHHHHHHH----HHCCCHHHE--E
T ss_conf             651799989989999937802969999988999999998653-0677989--986999999999----878785879--9


Q ss_pred             EEE
Q ss_conf             650
Q gi|254780497|r   78 IVA   80 (324)
Q Consensus        78 i~~   80 (324)
                      +.+
T Consensus        79 v~n   81 (352)
T PRK03321         79 VGC   81 (352)
T ss_pred             ECC
T ss_conf             874


No 286
>PRK13929 rod-share determining protein MreBH; Provisional
Probab=34.62  E-value=32  Score=14.82  Aligned_cols=74  Identities=8%  Similarity=0.108  Sum_probs=41.2

Q ss_pred             HHHHHHHHHHHHHHHHHHH--HCCCCCCCC-CCCCCCCH---HHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf             4455777777788889874--001000121-02444441---58999999719787673365865193301269999999
Q gi|254780497|r  220 FKYAVEKAVELIEKVFDST--HLTIENIDW-FVPHQANW---RIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAV  293 (324)
Q Consensus       220 ~~~~~~~~~~~i~~~L~~~--gl~~~did~-~~~Hq~~~---~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~  293 (324)
                      .+..+..+.+.++++|+++  .+..+.+|. +++-=++-   .+.+.+.+.+++|.....+-.+-.. .|++-..=.++.
T Consensus       251 ~~~~~~~i~~~i~~~L~~~~pel~~di~d~gIvLvGG~srip~i~~~l~~~~~~~v~~~~nP~~~Va-~GAa~~~~~i~~  329 (335)
T PRK13929        251 MRESLLHILEAIRATLEDCPPELSGDIVDRGVILTGGGALLNGIKEWLSQEIVVPVHVAANPLESVA-IGTGRSLEVIDK  329 (335)
T ss_pred             HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH-HHHHHHHHHHHH
T ss_conf             9999999999999999838843325432782999774043267999999997819877988676799-989999976999


Q ss_pred             H
Q ss_conf             9
Q gi|254780497|r  294 A  294 (324)
Q Consensus       294 ~  294 (324)
                      +
T Consensus       330 ~  330 (335)
T PRK13929        330 L  330 (335)
T ss_pred             H
T ss_conf             9


No 287
>PRK02947 hypothetical protein; Provisional
Probab=33.97  E-value=17  Score=16.50  Aligned_cols=15  Identities=20%  Similarity=0.173  Sum_probs=8.1

Q ss_pred             CCCCCCHHHHHHCCC
Q ss_conf             985310011220268
Q gi|254780497|r   89 PSTAVNIQNRLGMKR  103 (324)
Q Consensus        89 p~~a~~i~~~LGl~~  103 (324)
                      |..+..+.+...+.+
T Consensus        93 ~g~a~~il~~~~i~~  107 (247)
T PRK02947         93 EGYAKLILDRYPIRP  107 (247)
T ss_pred             CCHHHHHHHHCCCCC
T ss_conf             509999998679999


No 288
>PTZ00122 phosphoglycerate mutase; Provisional
Probab=33.74  E-value=33  Score=14.67  Aligned_cols=73  Identities=15%  Similarity=0.114  Sum_probs=42.3

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH-HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCE
Q ss_conf             777788889874001000121024444415899999971978767336-5865193301269999999998068899989
Q gi|254780497|r  227 AVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIV-TVDIHGNTSAASIPLALAVAVKEGRVKKGDC  305 (324)
Q Consensus       227 ~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~-~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~  305 (324)
                      +..+++.-.-+..-+-+..+.+++| +| -+.-.+++.|.+|++.+.. .+.+.|=|              --.+.|..+
T Consensus       213 IEaAFrkYFhRp~~~~DsyeiiVcH-aN-VIRYfvcRALQlPpeaWLR~sl~h~sIT--------------wi~I~p~G~  276 (296)
T PTZ00122        213 INKAYETYFYKPGGSEDEYQLVICH-GN-VIRYFLCRALQYPLFAWLRFSSYNCGIT--------------WLVLDDEGS  276 (296)
T ss_pred             HHHHHHHHCCCCCCCCCCEEEEEEE-HH-HHHHHHHHHHCCCHHHHEEECCCCCCEE--------------EEEECCCCC
T ss_conf             9999997613788888737999840-27-8999999986188066245013787559--------------999848996


Q ss_pred             EEEEEEC-CCC
Q ss_conf             9999971-450
Q gi|254780497|r  306 LLLEAMG-GGF  315 (324)
Q Consensus       306 vll~~~G-~G~  315 (324)
                      |.+-++| +|+
T Consensus       277 Vslr~lGd~Gh  287 (296)
T PTZ00122        277 VVLREFGSVGH  287 (296)
T ss_pred             EEEEEECCCCC
T ss_conf             89998267678


No 289
>PRK13980 NAD synthetase; Provisional
Probab=33.56  E-value=34  Score=14.65  Aligned_cols=121  Identities=18%  Similarity=0.241  Sum_probs=53.7

Q ss_pred             HCCCCCEEEEECC-CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
Q ss_conf             0247518898289-889999999999999974021235443366501223345898531001122026864444210122
Q gi|254780497|r   36 RRVGISRRHIAGK-DETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCS  114 (324)
Q Consensus        36 ~~~GI~~R~~~~~-~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~  114 (324)
                      +++|.+.--+--. +-+++-.|+-| .+||     .|+.+-.|..-+..........|..+++.||++ ....||+..+.
T Consensus        24 ~~~g~kg~VlGlSGGIDSavva~La-~~Al-----g~~~v~~v~mP~~~ss~~s~~dA~~la~~lgi~-~~~i~I~~~~~   96 (264)
T PRK13980         24 EKAGFKGVVLGLSGGIDSAVVAYLA-VKAL-----GKENVLALLMPYRVSPPEDLEDALLVAERLGIE-YKVIEITPIVD   96 (264)
T ss_pred             HHHCCCEEEEECCCCHHHHHHHHHH-HHHC-----CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCC-EEEEECHHHHH
T ss_conf             9809980999798688899999999-9854-----966068998989999887899999999986998-49982799999


Q ss_pred             CHHHHHHHHHHH----H----------HHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf             003467888998----9----------6415565316763022432224566323234544312344
Q gi|254780497|r  115 GFVYAVTTADSY----I----------RSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGDGAGALIL  167 (324)
Q Consensus       115 ~~~~al~~A~~l----i----------~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGDGAaA~ll  167 (324)
                      ++...+.....+    +          .-....+.||++..+.|-..    -.-+..+|||++.+..
T Consensus        97 ~~~~~~~~~~~~~~~NiqaR~Rm~~Ly~~An~~~~lVlgTgNksE~~----~Gy~TkyGD~~~d~~P  159 (264)
T PRK13980         97 AFFSAVPDADRLRRGNIMARTRMVLLYDYANRDNRLVLGTSNKSELL----LGYFTKYGDGAVDINP  159 (264)
T ss_pred             HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHH----HHHCCCCCCCCCCHHH
T ss_conf             99986310006688875898999999998643397765588674798----7210016876656245


No 290
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=33.09  E-value=34  Score=14.60  Aligned_cols=83  Identities=23%  Similarity=0.376  Sum_probs=48.4

Q ss_pred             CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHH---CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE
Q ss_conf             922699999996498411788999880999878110---24751889828988999999999999997402123544336
Q gi|254780497|r    1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKR---RVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLI   77 (324)
Q Consensus         1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~---~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~i   77 (324)
                      ||++-|..+|.-+=.-.+-        +.+..||.+   ..|+.=++..--+.+..++ .++.+.+++++       |+|
T Consensus         1 ~~~a~iI~vG~ElL~G~iv--------dtNa~~la~~L~~~G~~v~~~~~VgD~~~~I-~~~l~~a~~r~-------D~v   64 (255)
T COG1058           1 MMKAEIIAVGDELLSGRIV--------DTNAAFLADELTELGVDLARITTVGDNPDRI-VEALREASERA-------DVV   64 (255)
T ss_pred             CCEEEEEEECCCEECCCEE--------CCHHHHHHHHHHHCCCEEEEEEECCCCHHHH-HHHHHHHHHCC-------CEE
T ss_conf             9358999971422147403--------4229999999996496189999639999999-99999997189-------989


Q ss_pred             EEECC---CCCCCCCCCCCCHHHHHHCC
Q ss_conf             65012---23345898531001122026
Q gi|254780497|r   78 IVATS---TPDQTFPSTAVNIQNRLGMK  102 (324)
Q Consensus        78 i~~s~---~~~~~~p~~a~~i~~~LGl~  102 (324)
                      |+..-   |+|++   ++--+++.||.+
T Consensus        65 I~tGGLGPT~DDi---T~e~vAka~g~~   89 (255)
T COG1058          65 ITTGGLGPTHDDL---TAEAVAKALGRP   89 (255)
T ss_pred             EECCCCCCCCCHH---HHHHHHHHHCCC
T ss_conf             9879858996276---899999982998


No 291
>KOG4230 consensus
Probab=32.88  E-value=35  Score=14.58  Aligned_cols=20  Identities=25%  Similarity=0.325  Sum_probs=9.1

Q ss_pred             HHHHHHHHHHCCCCCCCCEEE
Q ss_conf             999999974021235443366
Q gi|254780497|r   58 AAARDALHHAEMSVDDIDLII   78 (324)
Q Consensus        58 ~Aa~~al~~a~~~~~~Id~ii   78 (324)
                      +||++.++.+. ++..|+++=
T Consensus       286 eaAKR~r~es~-~~~~i~~~p  305 (935)
T KOG4230         286 EAAKRQREESK-KKRKIDLLP  305 (935)
T ss_pred             HHHHHHHHHCC-CCCCCCCCC
T ss_conf             99999987424-667688875


No 292
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase; InterPro: IPR010237   This family of proteins includes the SDT1/SSM1 gene from yeast, which has been shown to code for a pyrimidine (UMP/CMP) 5'nucleotidase. The family spans plants, fungi and bacteria. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily..
Probab=30.68  E-value=28  Score=15.20  Aligned_cols=21  Identities=0%  Similarity=0.031  Sum_probs=9.2

Q ss_pred             CCCHHHHHHHHHHCC-CCHHHH
Q ss_conf             444158999999719-787673
Q gi|254780497|r  252 QANWRIINSIVDKMK-IPFDKV  272 (324)
Q Consensus       252 q~~~~~~~~~~~~lg-l~~e~~  272 (324)
                      =|+....+.+++..+ ++++|.
T Consensus       161 KP~~~ay~~~~~~~~~vd~~~~  182 (205)
T TIGR01993       161 KPSPEAYEKALREAGVVDPERA  182 (205)
T ss_pred             CCCHHHHHHHHHHHCCCCCCCE
T ss_conf             8888999999998558872001


No 293
>TIGR02365 dha_L_ycgS dihydroxyacetone kinase, L subunit; InterPro: IPR012737    Two types of dihydroxyacetone kinase (glycerone kinase) are described. In yeast and a few bacteria, e.g. Citrobacter freundii, the enzyme is a single chain that uses ATP as phosphoryl donor and is designated 2.7.1.29 from EC. By contract, Escherichia coli and many other bacterial species have a multisubunit form (2.7.1 from EC) with a phosphoprotein donor related to PTS transport proteins. The sequences in this entry represent the subunit homologous to the E. coli YcgS subunit..
Probab=30.57  E-value=23  Score=15.74  Aligned_cols=14  Identities=36%  Similarity=0.292  Sum_probs=5.3

Q ss_pred             HCCC--HHHHHHHHHH
Q ss_conf             1933--0126999999
Q gi|254780497|r  279 HGNT--SAASIPLALA  292 (324)
Q Consensus       279 ~Gn~--~sas~~~~L~  292 (324)
                      +||.  |+.|..+-|.
T Consensus       181 iGH~DPGA~SS~~~~~  196 (200)
T TIGR02365       181 IGHIDPGATSSYLLLN  196 (200)
T ss_pred             CCCCCCHHHHHHHHHH
T ss_conf             4550816789999999


No 294
>cd03749 proteasome_alpha_type_1 proteasome_alpha_type_1. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming an elongated alpha-beta-beta-alpha cylinder with a central cavity. The proteasome alpha and beta subunits are members of the N-terminal nucleophile (Ntn)-hydrolase superfamily. Their N-terminal threonine residues are exposed as a nucleophile in peptide bond hydrolysis. Mammals have 7 alpha and 7 beta proteasome subunits while archaea have one of each.
Probab=30.00  E-value=39  Score=14.28  Aligned_cols=30  Identities=17%  Similarity=0.359  Sum_probs=18.0

Q ss_pred             HHHHHHHHHHHHHHHHHH-HHCCCCCCCCCC
Q ss_conf             445577777778888987-400100012102
Q gi|254780497|r  220 FKYAVEKAVELIEKVFDS-THLTIENIDWFV  249 (324)
Q Consensus       220 ~~~~~~~~~~~i~~~L~~-~gl~~~did~~~  249 (324)
                      .+.+++...+.+.+.+.. ..++.++|+-.+
T Consensus       179 ~eeav~lA~~aL~~~~~~~~~l~~~~ieiav  209 (211)
T cd03749         179 LEELIKHALRALRETLPGEQELTIKNVSIAI  209 (211)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
T ss_conf             9999999999999985166764867359999


No 295
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases; InterPro: IPR005958   This entry describes tyrosine aminotransferase (2.6.1.5 from EC) as found in animals and Trypanosoma cruzi (Euglenozoa). It is the first enzyme of a pathway of tyrosine degradation via homogentisate.  L-tyrosine + 2-oxoglutarate = 4-hydroxyphenylpyruvate + L-glutamate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway are included in this family. ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding, 0006519 amino acid and derivative metabolic process.
Probab=29.84  E-value=36  Score=14.50  Aligned_cols=79  Identities=22%  Similarity=0.190  Sum_probs=44.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC--CCCCCCHH------HHHHCCCCCCCCCCCCCCCHHHHH
Q ss_conf             8899999999999999740212354433665012233458--98531001------122026864444210122003467
Q gi|254780497|r   49 DETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTF--PSTAVNIQ------NRLGMKRGFAFDMQAVCSGFVYAV  120 (324)
Q Consensus        49 ~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~--p~~a~~i~------~~LGl~~~~~~di~~~C~~~~~al  120 (324)
                      .-.+..-|.+|+.++++-...+-       |+++.+ .+.  -+.|.+..      +++  ++-+.-|=..=|+|..+||
T Consensus        53 ~lrT~~ea~~Av~~al~Sg~~Ng-------Yap~~G-~~~AR~AvA~y~~~sfvhn~~~--~~~l~a~DV~ltsGCsqAI  122 (424)
T TIGR01265        53 NLRTAPEAEEAVKDALRSGKFNG-------YAPSVG-ALAAREAVAEYLSNSFVHNQRL--PGKLSADDVVLTSGCSQAI  122 (424)
T ss_pred             CCCCCHHHHHHHHHHHHCCCCCC-------CCCCCC-HHHHHHHHHHHHHCCEEECCCC--CCCCCCCCEEEECCCHHHH
T ss_conf             88887899999999983478567-------664368-6788899999966222125788--8875766448847722689


Q ss_pred             HHHHHHHHHCCCCCCEE
Q ss_conf             88899896415565316
Q gi|254780497|r  121 TTADSYIRSGVVRRVMV  137 (324)
Q Consensus       121 ~~A~~li~~g~~~~~Lv  137 (324)
                      +++-.-|+..+..|+||
T Consensus       123 e~~I~aLA~~pG~NILv  139 (424)
T TIGR01265       123 EIVIEALAQNPGANILV  139 (424)
T ss_pred             HHHHHHHHCCCCCCEEC
T ss_conf             99999972689883556


No 296
>PRK06851 hypothetical protein; Provisional
Probab=29.63  E-value=39  Score=14.24  Aligned_cols=55  Identities=15%  Similarity=0.299  Sum_probs=32.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHHH--------CCCCCCCCEEEEEC--------CCCCCCCCCCCCCHHHHHHC
Q ss_conf             898899999999999999740--------21235443366501--------22334589853100112202
Q gi|254780497|r   47 GKDETTASLGEAAARDALHHA--------EMSVDDIDLIIVAT--------STPDQTFPSTAVNIQNRLGM  101 (324)
Q Consensus        47 ~~~e~~~~la~~Aa~~al~~a--------~~~~~~Id~ii~~s--------~~~~~~~p~~a~~i~~~LGl  101 (324)
                      +|+.--++|-.+-+++.+++.        ..||+.+|.|+.-.        +.|....|..-.-|-+-+++
T Consensus        39 GpGtGKStlmK~ig~~~~~~GydVE~~hcssD~~SlDGvvip~lk~aivDGTaPHvvdP~~PGaveeiInL  109 (368)
T PRK06851         39 GPGTGKSTLMKKIGEEFLEKGYDVEFLHCSSDNDSLDGVIIPELKIAILDGTAPHVVDPKAPGAVEEIINL  109 (368)
T ss_pred             CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEEH
T ss_conf             99977899999999999968983799975899886435997578779974888766589999843479777


No 297
>PRK11678 putative chaperone; Provisional
Probab=29.54  E-value=39  Score=14.23  Aligned_cols=18  Identities=28%  Similarity=0.541  Sum_probs=7.8

Q ss_pred             HHHHHHCCCCCCCCEEEEE
Q ss_conf             9999980688999899999
Q gi|254780497|r  291 LAVAVKEGRVKKGDCLLLE  309 (324)
Q Consensus       291 L~~~~~~g~l~~Gd~vll~  309 (324)
                      ++.++++..++| |.|+|+
T Consensus       389 ~~~~L~~Ag~~~-D~V~lv  406 (450)
T PRK11678        389 VQLALDQAQVKP-DVIYLT  406 (450)
T ss_pred             HHHHHHHCCCCC-CEEEEC
T ss_conf             999999759999-989984


No 298
>TIGR00011 YbaK_EbsC ybaK/ebsC protein; InterPro: IPR004369   The family includes P36922 from SWISSPROT, a protein which affects the expression of a receptor called binding substance, that mediates mating aggregate formation in Enterococcus faecalis . It was suggested that this may be a regulatory protein that suppresses the function or expression of ebsA and/or ebsMB. A crystallographic study of another member of this family, P45202 from SWISSPROT from Haemophilus influenzae, (HI1434, YbaK) suggests that these proteins could be involved in nucleotide or oligonucleotide binding .; GO: 0006355 regulation of transcription DNA-dependent.
Probab=29.28  E-value=29  Score=15.11  Aligned_cols=47  Identities=15%  Similarity=0.144  Sum_probs=18.8

Q ss_pred             HHHHCCCCCEEEEE-CCCCCHHHHHHHHHHHHHHHHCCCCCCC--CEEEEECCC
Q ss_conf             81102475188982-8988999999999999997402123544--336650122
Q gi|254780497|r   33 WIKRRVGISRRHIA-GKDETTASLGEAAARDALHHAEMSVDDI--DLIIVATST   83 (324)
Q Consensus        33 ~i~~~~GI~~R~~~-~~~e~~~~la~~Aa~~al~~a~~~~~~I--d~ii~~s~~   83 (324)
                      ++.++-||...-+. +-|+....-+.++|+.    -|.+|++|  .+|+.....
T Consensus         5 r~L~~~kI~y~~~~Y~~d~~~~~~g~~~A~~----lG~~~~~VfKTLv~~~~~~   54 (156)
T TIGR00011         5 RLLDKAKIEYEVHEYEVDPDHDLDGESAAEK----LGVDPERVFKTLVAEGDKK   54 (156)
T ss_pred             HHHHHCCCCEEEECCCCCCCCCHHHHHHHHH----HCCCCCEEEEEEEEEECCC
T ss_conf             8899619956872135699886158999998----2998110688889960789


No 299
>TIGR00454 TIGR00454 conserved hypothetical protein TIGR00454; InterPro: IPR005245    This entry describes a family of conserved hypothetical proteins with no known function. .
Probab=29.06  E-value=40  Score=14.18  Aligned_cols=65  Identities=25%  Similarity=0.361  Sum_probs=50.0

Q ss_pred             CCEEEEECCCCCCCCCCCCCCHHHHHHC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf             4336650122334589853100112202-686444421012200346788899896415565316763022
Q gi|254780497|r   74 IDLIIVATSTPDQTFPSTAVNIQNRLGM-KRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF  143 (324)
Q Consensus        74 Id~ii~~s~~~~~~~p~~a~~i~~~LGl-~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~  143 (324)
                      +|-||..| +|  .+|.|-.+|+.+-.- ++....|-+++  |.+-=++-+.+.++..=..+.||+++|..
T Consensus        44 V~~ii~~T-SP--hTP~Te~y~~~~~~~~~~ivvidasGk--GYiEDl~E~~~hlE~~~~EP~lV~ssDl~  109 (204)
T TIGR00454        44 VDNIIVVT-SP--HTPKTEEYVAEKYKEYKRIVVIDASGK--GYIEDLREVLSHLELAFSEPLLVVSSDLV  109 (204)
T ss_pred             CCEEEEEE-CC--CCCCCHHHHHHCCCEEEEEEEEECCCC--CCHHHHHHHHHHHHHHHCCCEEEEECCHH
T ss_conf             75379983-77--797637887305850457889976999--60252789999877663398578743602


No 300
>PRK07475 hypothetical protein; Provisional
Probab=28.82  E-value=40  Score=14.15  Aligned_cols=70  Identities=17%  Similarity=0.102  Sum_probs=35.1

Q ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             9999999999999974021235443366501223345898531001122026-864444210122003467888998964
Q gi|254780497|r   51 TTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADSYIRS  129 (324)
Q Consensus        51 ~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~li~~  129 (324)
                      ...+--++|++++ ++.|.+.     |.  ++++ ++     +..|++|... +.+.+      +|.+..+-....++..
T Consensus        63 ~~l~~fi~Aa~~L-~~~G~~a-----It--tsCG-FL-----a~~Q~eLa~a~~vPV~------tSSLlQvP~v~~~l~~  122 (243)
T PRK07475         63 ALLDAFIAAAQEL-VAEGVRA-----IT--TSCG-FL-----ALFQKELAAAVGVPVA------TSSLLQVPLIQALLPP  122 (243)
T ss_pred             HHHHHHHHHHHHH-HHCCCCE-----EE--ECCC-CH-----HHHHHHHHHHHCCCHH------HHHHHHHHHHHHHCCC
T ss_conf             8999999999999-9759889-----98--6550-32-----9899999997199614------5268779999987089


Q ss_pred             CCCCCCEEEEECC
Q ss_conf             1556531676302
Q gi|254780497|r  130 GVVRRVMVIGSDT  142 (324)
Q Consensus       130 g~~~~~Lvv~~e~  142 (324)
                      +  +++-|++.+.
T Consensus       123 ~--~~vGIlT~~a  133 (243)
T PRK07475        123 G--QRVGILTASA  133 (243)
T ss_pred             C--CEEEEEEECH
T ss_conf             9--8579999614


No 301
>cd03752 proteasome_alpha_type_4 proteasome_alpha_type_4. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming an elongated alpha-beta-beta-alpha cylinder with a central cavity. The proteasome alpha and beta subunits are members of the N-terminal nucleophile (Ntn)-hydrolase superfamily. Their N-terminal threonine residues are exposed as a nucleophile in peptide bond hydrolysis. Mammals have 7 alpha and 7 beta proteasome subunits while archaea have one of each.
Probab=28.36  E-value=41  Score=14.10  Aligned_cols=28  Identities=36%  Similarity=0.514  Sum_probs=17.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             4557777777888898740010001210
Q gi|254780497|r  221 KYAVEKAVELIEKVFDSTHLTIENIDWF  248 (324)
Q Consensus       221 ~~~~~~~~~~i~~~L~~~gl~~~did~~  248 (324)
                      +.+++...+.+.+.+++..++.++|+-.
T Consensus       184 eeai~lai~al~~~~~~~~~~~~~iei~  211 (213)
T cd03752         184 EEALALAVKVLSKTMDSTKLTSEKLEFA  211 (213)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf             9999999999999970436888857999


No 302
>pfam02540 NAD_synthase NAD synthase. NAD synthase (EC:6.3.5.1) is involved in the de novo synthesis of NAD and is induced by stress factors such as heat shock and glucose limitation.
Probab=27.93  E-value=39  Score=14.27  Aligned_cols=29  Identities=17%  Similarity=0.388  Sum_probs=17.0

Q ss_pred             CCCCHHHHHHCCCCCCCCCCCCCCCHHHHH
Q ss_conf             531001122026864444210122003467
Q gi|254780497|r   91 TAVNIQNRLGMKRGFAFDMQAVCSGFVYAV  120 (324)
Q Consensus        91 ~a~~i~~~LGl~~~~~~di~~~C~~~~~al  120 (324)
                      .|-.+++.||++. ...||+....++...+
T Consensus        64 ~A~~la~~lgi~~-~~i~I~~~~~~~~~~~   92 (243)
T pfam02540        64 DALALAENLGINY-KTIDIKPIVRAFSQLF   92 (243)
T ss_pred             HHHHHHHHHCCCE-EEEECHHHHHHHHHHH
T ss_conf             9999999968926-9998889999999885


No 303
>COG0245 IspF 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Lipid metabolism]
Probab=27.52  E-value=42  Score=14.01  Aligned_cols=56  Identities=20%  Similarity=0.249  Sum_probs=36.4

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCC-C-----HHHHHHHHHHCCCCHHHHH---HHHHHHCCCH
Q ss_conf             77788889874001000121024444-4-----1589999997197876733---6586519330
Q gi|254780497|r  228 VELIEKVFDSTHLTIENIDWFVPHQA-N-----WRIINSIVDKMKIPFDKVI---VTVDIHGNTS  283 (324)
Q Consensus       228 ~~~i~~~L~~~gl~~~did~~~~Hq~-~-----~~~~~~~~~~lgl~~e~~~---~~~~~~Gn~~  283 (324)
                      .+...+.+.+.|+....+|-.+.-|. .     ..|.+.+++.|+++.+++.   .+-++.|-+|
T Consensus        77 L~~~~~~v~~~g~~i~Nvd~tii~~~PK~~P~~~amr~~ia~~L~i~~~~invKatT~E~LGf~G  141 (159)
T COG0245          77 LKEAVELVREKGYRIGNVDITIIAQRPKLGPYREAMRANIAELLGIPVDRINVKATTTEKLGFTG  141 (159)
T ss_pred             HHHHHHHHHHHCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHEEEEEECCCCCCCCC
T ss_conf             99999999985968876889999726766504999999999985999211478985367655556


No 304
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=27.45  E-value=43  Score=14.00  Aligned_cols=40  Identities=25%  Similarity=0.273  Sum_probs=31.1

Q ss_pred             EEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf             8982898899999999999999740212354433665012
Q gi|254780497|r   43 RHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATS   82 (324)
Q Consensus        43 R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~   82 (324)
                      .+...-...-++.....++++|.++++++.|||.|.++.-
T Consensus        28 ~~~~~~~r~hse~l~~~i~~ll~~~~~~~~dld~Iav~~G   67 (220)
T COG1214          28 EHTEKLKRNHAERLMPMIDELLKEAGLSLQDLDAIAVAKG   67 (220)
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECC
T ss_conf             9997158328899999999999875999778488999308


No 305
>PRK12390 1-aminocyclopropane-1-carboxylate deaminase; Provisional
Probab=27.31  E-value=43  Score=13.98  Aligned_cols=32  Identities=19%  Similarity=0.327  Sum_probs=27.0

Q ss_pred             CHHHHHHHHHHHHHHCCCCCCCCEEEEEEECC
Q ss_conf             30126999999999806889998999999714
Q gi|254780497|r  282 TSAASIPLALAVAVKEGRVKKGDCLLLEAMGG  313 (324)
Q Consensus       282 ~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~  313 (324)
                      ++++-.+..|-+++++|.+.+|++|+++=.|.
T Consensus       293 VYTgKa~~GL~~~i~~g~~~~g~~VlfiHTGG  324 (337)
T PRK12390        293 VYEGKSMHGMIDLVRKGEFPEGSKVLYAHLGG  324 (337)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
T ss_conf             37899999999999769989999089998987


No 306
>KOG1359 consensus
Probab=26.83  E-value=32  Score=14.80  Aligned_cols=89  Identities=17%  Similarity=0.201  Sum_probs=48.6

Q ss_pred             HHHHHHHHHHHHCCCCCCCCEEEEECCC-CCCC---------------CCCC--CCC-HHHHHHCCCCCCCCCCCCCCCH
Q ss_conf             9999999997402123544336650122-3345---------------8985--310-0112202686444421012200
Q gi|254780497|r   56 GEAAARDALHHAEMSVDDIDLIIVATST-PDQT---------------FPST--AVN-IQNRLGMKRGFAFDMQAVCSGF  116 (324)
Q Consensus        56 a~~Aa~~al~~a~~~~~~Id~ii~~s~~-~~~~---------------~p~~--a~~-i~~~LGl~~~~~~di~~~C~~~  116 (324)
                      -.+|.+++|+..|.-++.+.++. ++.+ .-.+               +|+.  |++ +...+--+....|+=.-.|+|-
T Consensus        86 ii~a~~~aleeyGaGlssvrfIc-Gtq~iHk~LE~kiAqfh~rED~ilypscfdANag~feail~pedAvfSDeLNhASI  164 (417)
T KOG1359          86 IINAGQKALEEYGAGLSSVRFIC-GTQDIHKLLESKIAQFHGREDTILYPSCFDANAGAFEAILTPEDAVFSDELNHASI  164 (417)
T ss_pred             HHHHHHHHHHHHCCCCCCEEEEE-CCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCHHHHHHCCCCCCCHH
T ss_conf             88989999998287864316884-45579999999999870877548733100344377877448254121000022034


Q ss_pred             HHHHHHHHHH------------HHHCCCCCCEEEEECCCCC
Q ss_conf             3467888998------------9641556531676302243
Q gi|254780497|r  117 VYAVTTADSY------------IRSGVVRRVMVIGSDTFSR  145 (324)
Q Consensus       117 ~~al~~A~~l------------i~~g~~~~~Lvv~~e~~S~  145 (324)
                      +-+++++..+            +.+-..+.-||+.-..+|.
T Consensus       165 IdGirLckry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSM  205 (417)
T KOG1359         165 IDGIRLCKRYRHVDVFDLEHCLISACKMRLKLVVTDGVFSM  205 (417)
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEECCEECC
T ss_conf             32467776644512677888777743321799985461214


No 307
>TIGR00417 speE spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase   A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (), spermine synthase () and putrescine N-methyltransferase () .   The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain . The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) . ; GO: 0003824 catalytic activity.
Probab=26.78  E-value=32  Score=14.76  Aligned_cols=47  Identities=11%  Similarity=0.163  Sum_probs=22.2

Q ss_pred             HHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCHHHHHHHHHHCCCCHHH
Q ss_conf             77777788889874001000-121024444415899999971978767
Q gi|254780497|r  225 EKAVELIEKVFDSTHLTIEN-IDWFVPHQANWRIINSIVDKMKIPFDK  271 (324)
Q Consensus       225 ~~~~~~i~~~L~~~gl~~~d-id~~~~Hq~~~~~~~~~~~~lgl~~e~  271 (324)
                      +..-+.+.++|++.|+=..+ =+-.++|+.-..=+...++..+++.-.
T Consensus       175 ~~Fy~~~~~aL~~~Gv~v~Qss~s~~~~~~~~~d~~r~~~~~~F~~~~  222 (284)
T TIGR00417       175 KEFYELLKKALNEDGVIVAQSSESPWLQLELIKDLKRKVKEVPFPITE  222 (284)
T ss_pred             HHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCE
T ss_conf             799999998529998899802788432748888788877526897530


No 308
>PRK10222 L-ascorbate-specific enzyme IIB component of PTS; Provisional
Probab=26.73  E-value=38  Score=14.29  Aligned_cols=10  Identities=30%  Similarity=0.328  Sum_probs=3.3

Q ss_pred             CCCHHHHHHH
Q ss_conf             9330126999
Q gi|254780497|r  280 GNTSAASIPL  289 (324)
Q Consensus       280 Gn~~sas~~~  289 (324)
                      |.+++.||.+
T Consensus        30 ~~l~~~DIIV   39 (85)
T PRK10222         30 SELSGADIII   39 (85)
T ss_pred             CCCCCCCEEE
T ss_conf             3467777898


No 309
>TIGR00329 gcp metalloendopeptidase, putative, glycoprotease family; InterPro: IPR000905   Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site . The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases .   Peptidases are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry. Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins.   Families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule.    This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase from Pasteurella haemolytica (Mannheimia haemolytica).   O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues . Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 , . Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion , .   Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis . The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region .; GO: 0008450 O-sialoglycoprotein endopeptidase activity, 0006508 proteolysis.
Probab=26.08  E-value=45  Score=13.84  Aligned_cols=41  Identities=22%  Similarity=0.344  Sum_probs=27.0

Q ss_pred             HHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCC--CCHHHHHHC
Q ss_conf             9999997402123544336650122334589853--100112202
Q gi|254780497|r   59 AARDALHHAEMSVDDIDLIIVATSTPDQTFPSTA--VNIQNRLGM  101 (324)
Q Consensus        59 Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a--~~i~~~LGl  101 (324)
                      =..+||++++++.+|||+|-|.. -| -+.|+.-  ..+++-|=+
T Consensus        60 L~~~Al~~~~~~~~~I~~IA~t~-~P-GL~g~L~vGat~Ar~La~  102 (337)
T TIGR00329        60 LLERALKESNVDISEIDLIAVTS-GP-GLGGALIVGATFARSLAL  102 (337)
T ss_pred             HHHHHHHHHCCCCCCCCEEEEEC-CC-CCCCHHHHHHHHHHHHHH
T ss_conf             99999998288701025789855-87-985146899999999989


No 310
>pfam02685 Glucokinase Glucokinase. This is a family of glucokinases or glucose kinases EC:2.7.1.2. These enzymes phosphorylate glucose using ATP as a donor to give glucose-6-phosphate and ADP.
Probab=25.71  E-value=46  Score=13.80  Aligned_cols=48  Identities=19%  Similarity=0.123  Sum_probs=27.0

Q ss_pred             HHHHHHHHHHCCCCCCCCEEEEECCCCC--------CCCCCC-CCCHHHHHHCCCCC
Q ss_conf             9999999740212354433665012233--------458985-31001122026864
Q gi|254780497|r   58 AAARDALHHAEMSVDDIDLIIVATSTPD--------QTFPST-AVNIQNRLGMKRGF  105 (324)
Q Consensus        58 ~Aa~~al~~a~~~~~~Id~ii~~s~~~~--------~~~p~~-a~~i~~~LGl~~~~  105 (324)
                      ++.++.|++.+....+++..+++-.-|-        ++-|.. ...|.+++|++++.
T Consensus        40 ~~l~~~l~~~~~~~~~~~~~~~avAGPv~~~~~~lTN~~W~i~~~~l~~~~g~~~v~   96 (316)
T pfam02685        40 EALQDYLAEADAGVARPRHACFAVAGPVDGDEVRLTNLPWVISIEELRAALGLDAVH   96 (316)
T ss_pred             HHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEECCCCEECHHHHHHHHCCCEEE
T ss_conf             999999984686667867699998677539978874786065599999972998599


No 311
>pfam01890 CbiG_C Cobalamin synthesis G C-terminus. Members of this family are involved in cobalamin synthesis. A member from Synechocystis sp. PCC 6803 has been designated cbiH but in fact represents a fusion between cbiH and cbiG. As other multi-functional proteins involved in cobalamin biosynthesis catalyse adjacent steps in the pathway, including CysG, CobL (CbiET), CobIJ and CobA-HemD, it is therefore possible that CbiG catalyses a reaction step adjacent to CbiH. In the anaerobic pathway such a step could be the formation of a gamma lactone, which is thought to help to mediate the anaerobic ring contraction process. Within the cobalamin synthesis pathway CbiG catalyses the both the opening of the lactone ring and the extrusion of the two-carbon fragment of cobalt-precorrin-5A from C-20 and its associated methyl group (deacylation) to give cobalt-precorrin-5B. This family is the C-terminal region, and the mid- and N-termival parts are conserved independently in other families.
Probab=25.49  E-value=46  Score=13.77  Aligned_cols=43  Identities=12%  Similarity=0.170  Sum_probs=24.2

Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCCC--CHHHHHHHHHHCCCC
Q ss_conf             7777788889874001000121024444--415899999971978
Q gi|254780497|r  226 KAVELIEKVFDSTHLTIENIDWFVPHQA--NWRIINSIVDKMKIP  268 (324)
Q Consensus       226 ~~~~~i~~~L~~~gl~~~did~~~~Hq~--~~~~~~~~~~~lgl~  268 (324)
                      .+...++++|++.++++++|+.+.....  +..-+..+++.+|+|
T Consensus        16 ~i~~~i~~~l~~~~l~~~~i~~iasid~K~~E~gl~~~a~~l~~p   60 (121)
T pfam01890        16 EIEAAIEEALAEAGLSPEAVAAIATIDLKADEPGLLELAARLGVP   60 (121)
T ss_pred             HHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCHHHHHHHHHHCCC
T ss_conf             999999999998599978840568632147988999999992998


No 312
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=25.41  E-value=46  Score=13.76  Aligned_cols=49  Identities=16%  Similarity=0.246  Sum_probs=33.1

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH---HHHHHHHHCCCCHHH
Q ss_conf             5777777788889874001000121024444415---899999971978767
Q gi|254780497|r  223 AVEKAVELIEKVFDSTHLTIENIDWFVPHQANWR---IINSIVDKMKIPFDK  271 (324)
Q Consensus       223 ~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~---~~~~~~~~lgl~~e~  271 (324)
                      .+....+.++.+|.++++++.||+.+++..++-+   +.+.+.+.++-++.+
T Consensus       288 ll~r~~~~~~~al~~a~l~~~~I~~VilvGGstriP~V~~~v~~~f~~~~~~  339 (579)
T COG0443         288 LLERTIEPVEQALKDAGLEKSDIDLVILVGGSTRIPAVQELVKEFFGKEPEK  339 (579)
T ss_pred             HHHHHHHHHHHHHHHCCCCHHHCCEEEEECCEECCHHHHHHHHHHHCCCCCC
T ss_conf             9999999999999974998532766998357755666999999982877435


No 313
>pfam09887 DUF2114 Uncharacterized protein conserved in archaea (DUF2114). This domain, found in various hypothetical archaeal proteins, has no known function.
Probab=25.36  E-value=46  Score=13.76  Aligned_cols=33  Identities=24%  Similarity=0.477  Sum_probs=27.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCCC-CCCEEEEEC
Q ss_conf             889999999999999974021235-443366501
Q gi|254780497|r   49 DETTASLGEAAARDALHHAEMSVD-DIDLIIVAT   81 (324)
Q Consensus        49 ~e~~~~la~~Aa~~al~~a~~~~~-~Id~ii~~s   81 (324)
                      .|+..+|-.....+++++++++-+ |+|+|+-.|
T Consensus        64 resV~elVrdtl~e~~k~A~l~i~~DL~FVVRST   97 (448)
T pfam09887        64 RESVAELVRDTLLESLKKAGLDIENDLDFVVRST   97 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECC
T ss_conf             8899999999999999973888655766799506


No 314
>TIGR02133 RPI_actino ribose 5-phosphate isomerase; InterPro: IPR011860   Ribose 5-phosphate isomerase (5.3.1.6 from EC) forms a homodimer and catalyses the interconversion of D-ribose 5-phosphate and D-ribulose 5-phosphate in the non-oxidative branch of the pentose phosphate pathway. This reaction permits the synthesis of ribose from other sugars, as well as the recycling of sugars from nucleotide breakdown. Two unrelated enzymes can catalyse this reaction: RpiA (found in most organisms) and RpiB (found in some bacteria and eukaryotes) . This entry represents the only candidates for ribose 5-phosphate isomerase in Actinobacteria..
Probab=25.25  E-value=47  Score=13.74  Aligned_cols=58  Identities=24%  Similarity=0.386  Sum_probs=39.8

Q ss_pred             EEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf             9828988999999999999997402123544336650122334589853100112202686444
Q gi|254780497|r   44 HIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAF  107 (324)
Q Consensus        44 ~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~  107 (324)
                      +..|++.+.+..+++||++..+...-.-.+..+||++|-.+....   |+.|.   |++-++++
T Consensus        37 ~~~D~~~~YP~~~~~AA~~~a~d~~dg~~~~g~vigGsG~G~~IA---ANKVk---G~RA~lAw   94 (154)
T TIGR02133        37 HIADPDDDYPKFCIAAAERVARDETDGIADLGLVIGGSGNGEQIA---ANKVK---GIRAALAW   94 (154)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHH---CCCCC---CCEEEEHH
T ss_conf             567987775168999999985684346132435771478602221---04644---40222101


No 315
>PRK00292 glk glucokinase; Provisional
Probab=24.92  E-value=47  Score=13.71  Aligned_cols=44  Identities=23%  Similarity=0.258  Sum_probs=21.6

Q ss_pred             HHHHHHHHHCCCCCCCCEEEEECCCC---C-----CCCCCC-CCCHHHHHHCCCCC
Q ss_conf             99999974021235443366501223---3-----458985-31001122026864
Q gi|254780497|r   59 AARDALHHAEMSVDDIDLIIVATSTP---D-----QTFPST-AVNIQNRLGMKRGF  105 (324)
Q Consensus        59 Aa~~al~~a~~~~~~Id~ii~~s~~~---~-----~~~p~~-a~~i~~~LGl~~~~  105 (324)
                      +.++.|++.+.+|..+   +++-.-|   +     +.-|.. ...+.+++|++++.
T Consensus        43 ~l~~~l~~~~~~~~~a---~iavAGPv~~~~~~lTN~~W~i~~~~l~~~~g~~~v~   95 (315)
T PRK00292         43 AVRVYLDEHGVQVGDA---CFAIAGPVDGDEVRMTNHHWVFSIARMAAELGLDHLL   95 (315)
T ss_pred             HHHHHHHHCCCCCCEE---EEEEECCCCCCEEEEECCCCEEEHHHHHHHHCCCCEE
T ss_conf             9999998579983549---9999787539988766677375399999863988189


No 316
>PRK00084 ispF 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed
Probab=24.89  E-value=47  Score=13.70  Aligned_cols=56  Identities=21%  Similarity=0.299  Sum_probs=35.8

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCC-CC-----HHHHHHHHHHCCCCHHHHH---HHHHHHCCC
Q ss_conf             77778888987400100012102444-44-----1589999997197876733---658651933
Q gi|254780497|r  227 AVELIEKVFDSTHLTIENIDWFVPHQ-AN-----WRIINSIVDKMKIPFDKVI---VTVDIHGNT  282 (324)
Q Consensus       227 ~~~~i~~~L~~~gl~~~did~~~~Hq-~~-----~~~~~~~~~~lgl~~e~~~---~~~~~~Gn~  282 (324)
                      +-+.+.+.+.+.|+.+..||..+.-| |.     ..|.+.+.+.|+++.+++.   .|-+..|-+
T Consensus        78 ~L~~~~~~l~~~g~~I~NiD~tii~e~PKi~p~~~~i~~~ls~lL~i~~~~IsiKatT~E~lG~i  142 (159)
T PRK00084         78 LLREVVRLLKEKGYRIGNVDVTIIAQRPKMAPHIEAMRANIAEDLGIPLDDVNVKATTTEKLGFT  142 (159)
T ss_pred             HHHHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC
T ss_conf             99999999998298789703899916763279999999999999699834499999528987615


No 317
>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family; InterPro: IPR011896    A number of anaerobic and microaerophilic species lack pyruvate dehydrogenase and have instead a four subunit, oxygen-sensitive pyruvate oxidoreductase, with either ferredoxins or flavodoxins used as the acceptor. Several related four-subunit enzymes may exist in the same species. This entry describes the beta subunits, representing mostly pyruvate and 2-ketoisovalerate specific enzymes..
Probab=24.79  E-value=48  Score=13.69  Aligned_cols=86  Identities=14%  Similarity=0.090  Sum_probs=41.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH-HHHHHHHC-CCCHHHHHHHHHHHC---CCHHHHHHHHHHHH
Q ss_conf             44557777777888898740010001210244444158-99999971-978767336586519---33012699999999
Q gi|254780497|r  220 FKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRI-INSIVDKM-KIPFDKVIVTVDIHG---NTSAASIPLALAVA  294 (324)
Q Consensus       220 ~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~-~~~~~~~l-gl~~e~~~~~~~~~G---n~~sas~~~~L~~~  294 (324)
                      |.+-+..+.+.|++++.--|...=||=.=|+. .|.-. .+.+.+++ .|..|+.++=+.+=|   .-.-.=..-++.++
T Consensus       158 fs~d~~hLKeiiK~A~~H~G~AlvDiLQPCvT-yN~inT~~WY~~R~YkL~~~~gyDP~~~~Gl~p~~~e~k~~~a~~KA  236 (302)
T TIGR02177       158 FSGDVAHLKEIIKEAINHKGYALVDILQPCVT-YNKINTYEWYKERVYKLEDEEGYDPIVREGLTPEELEEKAARAIKKA  236 (302)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC-CCCCCCHHHHHHHCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             88748999999999732898458761178887-46666657676407540168887887887558758999999999997


Q ss_pred             HHCCCCCCCCEE
Q ss_conf             980688999899
Q gi|254780497|r  295 VKEGRVKKGDCL  306 (324)
Q Consensus       295 ~~~g~l~~Gd~v  306 (324)
                      ++-|.+.|=|+|
T Consensus       237 ~EwGtidPv~rI  248 (302)
T TIGR02177       237 LEWGTIDPVDRI  248 (302)
T ss_pred             HCCCCCCCCCCC
T ss_conf             247985864323


No 318
>pfam01902 ATP_bind_4 ATP-binding region. This family of proteins probably binds ATP. This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N terminus.In some members of this family, this domain is associated with pfam01042.
Probab=24.70  E-value=48  Score=13.68  Aligned_cols=68  Identities=16%  Similarity=0.228  Sum_probs=32.7

Q ss_pred             HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             9999999740212354433665012233458985310011220268644-442101220034678889989641556531
Q gi|254780497|r   58 AAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFA-FDMQAVCSGFVYAVTTADSYIRSGVVRRVM  136 (324)
Q Consensus        58 ~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~-~di~~~C~~~~~al~~A~~li~~g~~~~~L  136 (324)
                      ++.++++++-     +|+.++++-...+|.- .---.+++++|+..... ..        ...-.+...+++.| .+ ++
T Consensus        75 ~~L~~~l~~~-----~i~~vv~GdI~s~~qr-~~~e~~c~~lgl~~~~PLW~--------~d~~~ll~e~i~~G-f~-ai  138 (219)
T pfam01902        75 EDLAGFLESL-----DVDALVAGAIYSEYQK-SRIESVCRELGLKPFAPLWG--------RDPRKLAEEIVREG-FE-VA  138 (219)
T ss_pred             HHHHHHHHHC-----CCCEEEECCCCCHHHH-HHHHHHHHHCCCEEEECCCC--------CCHHHHHHHHHHCC-CE-EE
T ss_conf             9999999875-----9869999860368899-99999999729889710348--------99999999999879-94-99


Q ss_pred             EEEEC
Q ss_conf             67630
Q gi|254780497|r  137 VIGSD  141 (324)
Q Consensus       137 vv~~e  141 (324)
                      ||+.+
T Consensus       139 Iv~v~  143 (219)
T pfam01902       139 IVAVS  143 (219)
T ss_pred             EEEEE
T ss_conf             99985


No 319
>TIGR01693 UTase_glnD protein-P-II uridylyltransferase; InterPro: IPR010043   This entry describes GlnD, the uridylyltransferase/uridylyl-removing enzyme for signal-transduction protein PII, and acts as the sensory component of the nitrogen regulation (ntr) system . The ntr system modulates nitrogen metabolism in response to the prevailing nitrogen source and the requirements of the cell. During nitrogen fixation, ammonia and 2-oxoglutarate can be used to produce glutamate. The activity of the PII protein is stimulated by glutamine and inhibited by 2-oxoglutarate. Under glutamate-limiting conditions, PII is uridylylated by GlnD leading to the activation of glutamate synthetase and to the stimulation of NtrC-dependent promoters. Under high concentrations of fixed nitrogen, PII is de-uridylylated leading to the inactivation of the glutamate synthetase pathway and switching off NtrC-dependent promoters .   Not all homologues of PII share the property of uridylyltransferase modification on the characteristic Tyr residue (see IPR002332 from INTERPRO), but the modification site is preserved in the PII homologue of all species with a member of this family. ; GO: 0008773 [protein-PII] uridylyltransferase activity, 0006807 nitrogen compound metabolic process.
Probab=23.72  E-value=50  Score=13.56  Aligned_cols=52  Identities=23%  Similarity=0.369  Sum_probs=27.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCCCEEE--------EE-CC-CCCCCCCCCCCCHHHHHH
Q ss_conf             889999999999999974021235443366--------50-12-233458985310011220
Q gi|254780497|r   49 DETTASLGEAAARDALHHAEMSVDDIDLII--------VA-TS-TPDQTFPSTAVNIQNRLG  100 (324)
Q Consensus        49 ~e~~~~la~~Aa~~al~~a~~~~~~Id~ii--------~~-s~-~~~~~~p~~a~~i~~~LG  100 (324)
                      +.+=+.++++-|++.=.+-|+++.++++|.        .. |. -+|-.-|.+-..+++++|
T Consensus       511 gGDHs~~GA~~A~~~C~R~GL~~~~~~~vawLVr~HLlmS~tAqRRDl~DP~tv~~FA~~v~  572 (903)
T TIGR01693       511 GGDHSVLGAEDARDVCQRLGLDRPDTELVAWLVRNHLLMSITAQRRDLNDPETVFAFAEAVG  572 (903)
T ss_pred             CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHC
T ss_conf             96688985999999987538898899999999860032542100015897389999999836


No 320
>TIGR01393 lepA GTP-binding protein LepA; InterPro: IPR006297   LepA (GUF1 in Saccaromyces) is a GTP-binding membrane protein related to EF-G and EF-Tu. Two types of phylogenetic tree, rooted by other GTP-binding proteins, suggest that eukaryotic homologs (including GUF1 of yeast) originated within the bacterial LepA family. The function of the proteins in this family are unknown. ; GO: 0005525 GTP binding.
Probab=23.37  E-value=47  Score=13.75  Aligned_cols=110  Identities=15%  Similarity=0.276  Sum_probs=50.2

Q ss_pred             EEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC
Q ss_conf             99999964984117889998809998781102475188982898899999999999999740212354433665012233
Q gi|254780497|r    6 VRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPD   85 (324)
Q Consensus         6 I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~   85 (324)
                      +.-+|+..|.-.+..++|..  | .-|||.  .||++-.=+.=|. +.|.+..=|+++|  .|..+  +--+||++-+|-
T Consensus       235 V~evG~~~P~~~~~~~~L~a--G-eVGy~~--AgIK~v~D~~VGD-TiT~~~~Pa~epl--pGF~~--~KP~VFaGlYPi  304 (598)
T TIGR01393       235 VDEVGVFTPKLEVKTQELSA--G-EVGYII--AGIKDVSDVKVGD-TITSVKNPAKEPL--PGFKE--VKPMVFAGLYPI  304 (598)
T ss_pred             EEEEEEECCCCCCCCCCEEC--C-CEEEEE--EEEEECCCEECCC-EEECCCCCCCCCC--CCCCC--CCCEEEECCCCC
T ss_conf             75500343452014662001--6-305999--8653104112054-4525678737678--88612--576586012588


Q ss_pred             CCCCCCCCCHH---HHHHCC-----------CCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             45898531001---122026-----------86444421012200346788899896
Q gi|254780497|r   86 QTFPSTAVNIQ---NRLGMK-----------RGFAFDMQAVCSGFVYAVTTADSYIR  128 (324)
Q Consensus        86 ~~~p~~a~~i~---~~LGl~-----------~~~~~di~~~C~~~~~al~~A~~li~  128 (324)
                      ...  .=-.+.   ++|.|.           +++.|-..+|-.|.| =|.+...-|+
T Consensus       305 d~~--~Ye~LrdALeKL~LNDAsL~yE~E~S~ALGFGFRCGFLGLL-HmEiiqERLe  358 (598)
T TIGR01393       305 DTE--DYEDLRDALEKLKLNDASLTYEPESSPALGFGFRCGFLGLL-HMEIIQERLE  358 (598)
T ss_pred             CCH--HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCH-HHHHHHHHHH
T ss_conf             803--46899999755544025421022363003740433266633-6899987654


No 321
>COG2971 Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=23.33  E-value=51  Score=13.51  Aligned_cols=109  Identities=15%  Similarity=0.032  Sum_probs=52.7

Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             89999999999999974021235443366501223345898531001122026864444210122003467888998964
Q gi|254780497|r   50 ETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRS  129 (324)
Q Consensus        50 e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~  129 (324)
                      |.+..=...|+++++.++|.+|++|+....+-..-....  ...+.+.+..++-+.-+++   |+-+..||+-+.     
T Consensus        45 e~A~~ni~~ai~~A~~~aG~~~~~i~~~~agla~ag~~~--~~~~~~~~~~l~~a~~v~v---~~Dg~iAl~ga~-----  114 (301)
T COG2971          45 EEAVRNIKDAIREALDEAGLKPDEIAAIVAGLALAGANV--EEAREELERLLPFAGKVDV---ENDGLIALRGAL-----  114 (301)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEECCCCCH--HHHHHHHHHHCCCCCEEEE---ECCHHHHHHHCC-----
T ss_conf             789999999999998762899778170124550357662--6778889873686646999---557699986132-----


Q ss_pred             CCCCCCEEEEECCCCCCCCCCCCCC------CCCCCCCCCEEEEEC
Q ss_conf             1556531676302243222456632------323454431234402
Q gi|254780497|r  130 GVVRRVMVIGSDTFSRIVDWSDRST------CVLFGDGAGALILEG  169 (324)
Q Consensus       130 g~~~~~Lvv~~e~~S~~~d~~d~~~------~~lfGDGAaA~ll~~  169 (324)
                       ..+...|+.+-+-|-.+-+.....      .++.||=+++.-+.+
T Consensus       115 -~~~~Gii~i~GTGSi~~~~~gg~~~r~GG~Gf~IgDegSga~ig~  159 (301)
T COG2971         115 -GDDDGIIVIAGTGSIGYGRKGGRRERVGGWGFPIGDEGSGAWIGR  159 (301)
T ss_pred             -CCCCCEEEEECCCEEEEEEECCEEEEECCCCCCCCCCCHHHHHHH
T ss_conf             -799878999258769999708866775686751156520779999


No 322
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=23.22  E-value=17  Score=16.62  Aligned_cols=16  Identities=13%  Similarity=0.196  Sum_probs=8.9

Q ss_pred             CCCCCEEEEECCCCCC
Q ss_conf             5565316763022432
Q gi|254780497|r  131 VVRRVMVIGSDTFSRI  146 (324)
Q Consensus       131 ~~~~~Lvv~~e~~S~~  146 (324)
                      ++..+.|+....-.|+
T Consensus        40 ~~E~V~V~Nv~NG~Rf   55 (126)
T PRK05449         40 ENEKVDIVNVNNGARF   55 (126)
T ss_pred             CCCEEEEEECCCCCEE
T ss_conf             8988999989899589


No 323
>pfam07700 HNOB Heme NO binding. The HNOB (Heme NO Binding) domain, is a predominantly alpha-helical domain and binds heme via a covalent linkage to histidine. The HNOB domain is predicted to function as a heme-dependent sensor for gaseous ligands, and transduce diverse downstream signals, in both bacteria and animals.
Probab=23.18  E-value=51  Score=13.49  Aligned_cols=44  Identities=18%  Similarity=0.220  Sum_probs=19.8

Q ss_pred             HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC
Q ss_conf             9999999974021235443366501223345898531001122026
Q gi|254780497|r   57 EAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK  102 (324)
Q Consensus        57 ~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~  102 (324)
                      .+..++.+++++++++.+  .......+|..+......+++.+|++
T Consensus        19 ~~~w~~i~~~~~~~~~~~--f~~~~~Y~D~~~~~lv~a~s~~~g~~   62 (171)
T pfam07700        19 EDVWEQILEKAGFEPEGV--FTVHESYDDSELYDLVAAASKVLGIP   62 (171)
T ss_pred             HHHHHHHHHHCCCCCCCC--EECCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf             999999999729998982--51357618799999999999998929


No 324
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=23.13  E-value=49  Score=13.59  Aligned_cols=68  Identities=16%  Similarity=0.087  Sum_probs=30.8

Q ss_pred             HHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCC-CCCCCC
Q ss_conf             1102475188982898899999999999999740212354433665012233458985310011220268644-442101
Q gi|254780497|r   34 IKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFA-FDMQAV  112 (324)
Q Consensus        34 i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~-~di~~~  112 (324)
                      +.+.+|.+.---...+.++..||..       ..|+.|.  |-||+.+.    ..++++.-| -..|+++.++ .|-+..
T Consensus        38 ~~~~~g~k~~v~~~sgT~AL~lal~-------al~~~~g--deVivp~~----tf~at~~ai-~~~Ga~pvf~Dvd~~t~  103 (380)
T TIGR03588        38 LAEYVGAKYAVAFNSATSALHIACL-------ALGVGPG--DEVWTTPI----TFVATANCA-LYCGAKVDFVDIDPDTG  103 (380)
T ss_pred             HHHHHCCCEEEEECCHHHHHHHHHH-------HCCCCCC--CEEEECCC----CCHHHHHHH-HHCCCEEEEEECCHHHC
T ss_conf             9999785949997588999999999-------8499998--99996785----308867999-98799689984410001


Q ss_pred             CCC
Q ss_conf             220
Q gi|254780497|r  113 CSG  115 (324)
Q Consensus       113 C~~  115 (324)
                      |..
T Consensus       104 ~id  106 (380)
T TIGR03588       104 NID  106 (380)
T ss_pred             CCC
T ss_conf             489


No 325
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]
Probab=22.81  E-value=41  Score=14.13  Aligned_cols=43  Identities=21%  Similarity=0.246  Sum_probs=25.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHC
Q ss_conf             88999999999999997402123544336650122334589853100112202
Q gi|254780497|r   49 DETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGM  101 (324)
Q Consensus        49 ~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl  101 (324)
                      ++...+.-.+..++     -++|++||.||.+++-||..     +-|-+-|.+
T Consensus        53 ~~~f~~~~l~~l~~-----~id~k~iDYIi~~H~ePDhs-----g~l~~ll~~   95 (388)
T COG0426          53 GEKFFDEYLENLSK-----YIDPKEIDYIIVNHTEPDHS-----GSLPELLEL   95 (388)
T ss_pred             CCCHHHHHHHHHHH-----HCCHHCCEEEEECCCCCCHH-----HHHHHHHHH
T ss_conf             80169999999986-----34800171999788896335-----469999986


No 326
>PRK07027 cobalamin biosynthesis protein CbiG; Provisional
Probab=22.79  E-value=52  Score=13.45  Aligned_cols=42  Identities=7%  Similarity=0.031  Sum_probs=18.3

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCC--CHHHHHHHHHHCCCC
Q ss_conf             777788889874001000121024444--415899999971978
Q gi|254780497|r  227 AVELIEKVFDSTHLTIENIDWFVPHQA--NWRIINSIVDKMKIP  268 (324)
Q Consensus       227 ~~~~i~~~L~~~gl~~~did~~~~Hq~--~~~~~~~~~~~lgl~  268 (324)
                      +...++++|+++|+++.+|+.+..--.  +..-+..+++.+|+|
T Consensus        19 I~~ai~~~l~~~~l~~~~I~~iaSid~K~dE~gll~~a~~l~~p   62 (126)
T PRK07027         19 IEAAIRAALAQLPLASAEVRVVATLDLKADEAGLLALCARRGWP   62 (126)
T ss_pred             HHHHHHHHHHHCCCCHHHHHHEEEEECCCCCHHHHHHHHHHCCC
T ss_conf             99999999998699978811147410428989999999981998


No 327
>TIGR01120 rpiB ribose 5-phosphate isomerase B; InterPro: IPR004785   Ribose 5-phosphate isomerase (5.3.1.6 from EC) forms a homodimer and catalyses the interconversion of D-ribose 5-phosphate and D-ribulose 5-phosphate in the non-oxidative branch of the pentose phosphate pathway. This reaction permits the synthesis of ribose from other sugars, as well as the recycling of sugars from nucleotide breakdown. Two unrelated enzymes can catalyse this reaction: RpiA (found in most organisms) and RpiB (found in some bacteria and eukaryotes). RpiB is also involved in metabolism of the rare sugar, allose, in addition to ribose sugars. The structures of RpiA and RpiB are distinct, RpiB having a Rossmann-type alpha/beta/alpha sandwich topology . This entry represents the RpiB enzyme.; GO: 0004751 ribose-5-phosphate isomerase activity, 0006098 pentose-phosphate shunt.
Probab=22.77  E-value=36  Score=14.48  Aligned_cols=11  Identities=18%  Similarity=0.332  Sum_probs=4.5

Q ss_pred             CCCCCCHHHHH
Q ss_conf             98531001122
Q gi|254780497|r   89 PSTAVNIQNRL   99 (324)
Q Consensus        89 p~~a~~i~~~L   99 (324)
                      |.=|..|+.+.
T Consensus        42 P~YAk~V~~av   52 (143)
T TIGR01120        42 PDYAKEVVRAV   52 (143)
T ss_pred             CHHHHHHHHHH
T ss_conf             06899999997


No 328
>COG5499 Predicted transcription regulator containing HTH domain [Transcription]
Probab=22.71  E-value=52  Score=13.44  Aligned_cols=46  Identities=22%  Similarity=0.369  Sum_probs=28.5

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCC------------HHHHHHHHHHCCCCHHHH
Q ss_conf             7777888898740010001210244444------------158999999719787673
Q gi|254780497|r  227 AVELIEKVFDSTHLTIENIDWFVPHQAN------------WRIINSIVDKMKIPFDKV  272 (324)
Q Consensus       227 ~~~~i~~~L~~~gl~~~did~~~~Hq~~------------~~~~~~~~~~lgl~~e~~  272 (324)
                      -.++|+..++..|++..|+.-.+-.-..            ..+++++.+++|||.|-+
T Consensus        61 pve~I~t~Md~~glt~~dLa~~iGSks~vS~iL~~rraLTle~ikkL~q~~gIpa~~l  118 (120)
T COG5499          61 PVEVIRTLMDQYGLTLADLANEIGSKSRVSNILSGRRALTLEHIKKLHQRFGIPADVL  118 (120)
T ss_pred             HHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf             8899999999938718888998676188999973206766999999999869588875


No 329
>PRK01584 alanyl-tRNA synthetase; Provisional
Probab=22.70  E-value=52  Score=13.43  Aligned_cols=10  Identities=30%  Similarity=0.321  Sum_probs=4.0

Q ss_pred             HHHCCCCCCC
Q ss_conf             7402123544
Q gi|254780497|r   65 HHAEMSVDDI   74 (324)
Q Consensus        65 ~~a~~~~~~I   74 (324)
                      ++-|+.++.|
T Consensus       143 ~~~Gi~~~~I  152 (593)
T PRK01584        143 ESLGISKDRI  152 (593)
T ss_pred             HHCCCCHHHE
T ss_conf             9819989994


No 330
>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]
Probab=22.68  E-value=36  Score=14.48  Aligned_cols=69  Identities=20%  Similarity=0.251  Sum_probs=39.4

Q ss_pred             HHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf             01122026-864444210122003467888998964155653167630224322245663232345443123440
Q gi|254780497|r   95 IQNRLGMK-RGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGDGAGALILE  168 (324)
Q Consensus        95 i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGDGAaA~ll~  168 (324)
                      +.+...++ +..|.=|..||+|+..||-+|....-.- +..--|++.|-|+.++ |+|..-+   -++|.++=+.
T Consensus       181 L~em~~LkvP~I~iVIGEGgSGGALAi~vad~V~mle-~s~ySVisPEG~AsIL-WkD~~ka---~eAAe~mkit  250 (317)
T COG0825         181 LREMARLKVPIISIVIGEGGSGGALAIGVADRVLMLE-NSTYSVISPEGCASIL-WKDASKA---KEAAEAMKIT  250 (317)
T ss_pred             HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH-HCEEEECCHHHHHHHH-HCCHHHH---HHHHHHCCCC
T ss_conf             9998579998799996578752467765778999988-4412204731324455-2583242---9999982787


No 331
>PRK09483 response regulator; Provisional
Probab=22.53  E-value=53  Score=13.41  Aligned_cols=94  Identities=15%  Similarity=0.136  Sum_probs=44.4

Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf             99999999999740212354433665012233458985310011220268644442101220034678889989641556
Q gi|254780497|r   54 SLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVR  133 (324)
Q Consensus        54 ~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~  133 (324)
                      .+-.++.+..|++.    .+++.+-.+++..+..      ...+.. -++....|++..   ...++..+..+.+..+.-
T Consensus        11 ~l~r~gl~~~L~~~----~~~~vv~~a~~~~~~l------~~~~~~-~pDvvllDl~lp---~~~Gl~~~~~i~~~~p~~   76 (216)
T PRK09483         11 ELVRAGIRRILEDI----KGIKVVGEASCGEDAV------KWCRTN-AVDVVLMDMNMP---GIGGLEATRKILRSTPDV   76 (216)
T ss_pred             HHHHHHHHHHHHHC----CCCEEEEEECCHHHHH------HHHHHC-CCCEEEECCCCC---CCCCHHHHHHHHHHCCCC
T ss_conf             99999999999748----9958999989999999------999855-999999868898---987523778887408998


Q ss_pred             CCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf             53167630224322245663232345443123440
Q gi|254780497|r  134 RVMVIGSDTFSRIVDWSDRSTCVLFGDGAGALILE  168 (324)
Q Consensus       134 ~~Lvv~~e~~S~~~d~~d~~~~~lfGDGAaA~ll~  168 (324)
                      +++++++..-.....       -.+..||.++|.-
T Consensus        77 ~vivls~~~~~~~~~-------~al~~Ga~gyl~K  104 (216)
T PRK09483         77 KIIMLTVHTENPLPA-------KVMQAGAAGYLSK  104 (216)
T ss_pred             CEEEECCCCCHHHHH-------HHHHCCCCEEEEC
T ss_conf             578630566328899-------9997488789947


No 332
>TIGR02802 Pal_lipo peptidoglycan-associated lipoprotein; InterPro: IPR014169   Members in this entry represent the peptidoglycan-associated lipoprotein (Pal or OprL) protein of the Tol-Pal system. The system appears to be involved both in the maintenance of outer membrane integrity and in the import of certain organic molecules as nutrients. Members of this family contain a hydrodrophobic lipoprotein signal sequence, a conserved N-terminal cleavage and modification site, a poorly conserved low-complexity region, together comprising about 65 amino acids, and a well-conserved C-terminal domain. The entry represents only the conserved C-terminal domain..
Probab=22.49  E-value=53  Score=13.41  Aligned_cols=69  Identities=19%  Similarity=0.267  Sum_probs=41.9

Q ss_pred             HHHCCCHHHHHHCCCCCEE---EEECC---CCCHHHHH---HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf             8809998781102475188---98289---88999999---99999999740212354433665012233458985310
Q gi|254780497|r   25 SIVDTSDGWIKRRVGISRR---HIAGK---DETTASLG---EAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVN   94 (324)
Q Consensus        25 ~~~~~~~~~i~~~~GI~~R---~~~~~---~e~~~~la---~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~   94 (324)
                      +.+..-..|+.++..++ -   -++|+   .|-.+-|+   +.|+++.|...|+.+++|..|-|+-.=|-.+.-.-+++
T Consensus        17 ~~l~~hA~~L~~~p~~~-V~iEGH~DERGTrEYNlALGeRRA~AV~~yL~~~GV~~~q~~~vSYGkErP~~~G~~E~~w   94 (104)
T TIGR02802        17 AILDAHAQYLKKNPSVR-VTIEGHTDERGTREYNLALGERRANAVKDYLQAKGVSASQIETVSYGKERPAALGHDEAAW   94 (104)
T ss_pred             HHHHHHHHHHHHCCCCE-EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHH
T ss_conf             99999899998679937-8886307888887777778899999999999973896110046302665687789885777


No 333
>cd06221 sulfite_reductase_like Anaerobic sulfite reductase contains an FAD and NADPH binding module with structural similarity to ferredoxin reductase and sequence similarity to dihydroorotate dehydrogenases. Clostridium pasteurianum inducible dissimilatory type sulfite reductase is linked to ferredoxin and reduces NH2OH and SeO3 at a lesser rate than it's normal substate SO3(2-). Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+.
Probab=22.38  E-value=53  Score=13.40  Aligned_cols=55  Identities=16%  Similarity=0.221  Sum_probs=30.3

Q ss_pred             HHHHHHHCCCCCCCCCCC-CCCCHHHHHHHHHHCCCCHHHHHHHHHH-----HCCCHHHHH
Q ss_conf             889874001000121024-4444158999999719787673365865-----193301269
Q gi|254780497|r  233 KVFDSTHLTIENIDWFVP-HQANWRIINSIVDKMKIPFDKVIVTVDI-----HGNTSAASI  287 (324)
Q Consensus       233 ~~L~~~gl~~~did~~~~-Hq~~~~~~~~~~~~lgl~~e~~~~~~~~-----~Gn~~sas~  287 (324)
                      +.|.+.....++-..+++ +++=......+++.+|+|.|+++..+++     +|-++++.+
T Consensus       179 ~~l~~~~~~~~~~~vy~CGP~pMm~av~~~l~~~GVp~e~I~vSle~~M~CG~G~C~~C~v  239 (253)
T cd06221         179 DLLPELTLDPDNTVAIVCGPPIMMRFVAKELLKLGVPEEQIWVSLERRMKCGVGKCGHCQI  239 (253)
T ss_pred             HHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCHHEEEEECCCCCCCCCEECCCCCC
T ss_conf             9998737786885999939999999999999984998000799315536683605487246


No 334
>TIGR01264 tyr_amTase_E tyrosine aminotransferase; InterPro: IPR005957   This entry describes tyrosine aminotransferase (2.6.1.5 from EC) as found in animals and Trypanosoma cruzi (Euglenozoa). It is the first enzyme of a pathway of tyrosine degradation via homogentisate.  L-tyrosine + 2-oxoglutarate = 4-hydroxyphenylpyruvate + L-glutamate.; GO: 0004838 tyrosine transaminase activity, 0030170 pyridoxal phosphate binding, 0009072 aromatic amino acid family metabolic process.
Probab=22.21  E-value=53  Score=13.37  Aligned_cols=84  Identities=13%  Similarity=0.154  Sum_probs=42.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCC--CCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             88999999999999997402123--5443366501223345898531001122026864444210122003467888998
Q gi|254780497|r   49 DETTASLGEAAARDALHHAEMSV--DDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSY  126 (324)
Q Consensus        49 ~e~~~~la~~Aa~~al~~a~~~~--~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~l  126 (324)
                      ...+.+-..+|.+++++-...+-  -.|++..-.-.--.|   ..-+.|+++= ..+.+.-|=.-=|||..+||++|-.-
T Consensus        47 nL~~~~~~~~a~~~~v~S~~ynGY~p~vG~~~Ar~aia~~---y~~sfvhn~~-~~~~~~a~~Vvl~SGCS~Al~~ai~a  122 (415)
T TIGR01264        47 NLPTSEEAMQAMKESVDSGKYNGYAPTVGALEAREAIAEY---YRNSFVHNKR-PDGSIEADDVVLCSGCSHALEMAIEA  122 (415)
T ss_pred             CCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH---HHHHHHCCCC-CCCCCCCCCEEECCCCHHHHHHHHHH
T ss_conf             9988889999999875256606772001348888999998---7631100236-68720127647716702789999999


Q ss_pred             HHHCCCCCCEE
Q ss_conf             96415565316
Q gi|254780497|r  127 IRSGVVRRVMV  137 (324)
Q Consensus       127 i~~g~~~~~Lv  137 (324)
                      |+. +.+++||
T Consensus       123 ~Ad-~G~nvLV  132 (415)
T TIGR01264       123 LAD-AGQNVLV  132 (415)
T ss_pred             HCC-CCCEEEC
T ss_conf             537-9780630


No 335
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=22.14  E-value=54  Score=13.36  Aligned_cols=24  Identities=13%  Similarity=0.185  Sum_probs=15.3

Q ss_pred             EEEEEEEEECCCCEECHHHHHHHHCC
Q ss_conf             69999999649841178899988099
Q gi|254780497|r    4 STVRGIGLSLPRRVLSNSDLESIVDT   29 (324)
Q Consensus         4 ~~I~~~g~ylP~~~v~~~el~~~~~~   29 (324)
                      --|.++.-|.|...+  +|++++.|.
T Consensus         8 p~i~~~~~y~~g~~~--~~~~~~~g~   31 (367)
T PRK02731          8 PGILDIAPYVPGKPI--EELVREYGI   31 (367)
T ss_pred             CCCCCCCCCCCCCCH--HHHHHHCCC
T ss_conf             212048998999998--999986098


No 336
>TIGR01428 HAD_type_II haloacid dehalogenase, type II; InterPro: IPR006328   These proteins catalyze the hydrolytic dehalogenation of small L-2-haloalkanoic acids to yield the corresponding D-2-hydroxyalkanoic acids . They belong to the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases, class (subfamily) I. Note that the Type I HAD enzymes have not yet been fully characterised, but clearly utilise a substantially different catalytic mechanism and are thus unlikely to be related.; GO: 0019120 hydrolase activity acting on acid halide bonds in C-halide compounds, 0008152 metabolic process.
Probab=22.00  E-value=54  Score=13.35  Aligned_cols=44  Identities=9%  Similarity=0.317  Sum_probs=20.2

Q ss_pred             HHHHHHHHHHHH--CC--------CCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH
Q ss_conf             777888898740--01--------000121024444415899999971978767336
Q gi|254780497|r  228 VELIEKVFDSTH--LT--------IENIDWFVPHQANWRIINSIVDKMKIPFDKVIV  274 (324)
Q Consensus       228 ~~~i~~~L~~~g--l~--------~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~  274 (324)
                      ++.+..+++++|  |+        .|++..|=|   +...-+...+.||++++.+..
T Consensus       126 ~~~~~~~~~~aGvdL~~~Fd~~lS~d~~~~YKP---~P~vY~~~~~~lg~~p~ev~~  179 (207)
T TIGR01428       126 PAMLKSLVKHAGVDLDLPFDAVLSADAVRAYKP---APQVYQLALEALGVPPEEVLF  179 (207)
T ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC---CHHHHHHHHHHHCCCHHHEEE
T ss_conf             678999999628875300001014131235588---778888888763687878211


No 337
>PRK12615 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=22.00  E-value=48  Score=13.68  Aligned_cols=29  Identities=14%  Similarity=0.275  Sum_probs=12.3

Q ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
Q ss_conf             999999999999997402123544336650122
Q gi|254780497|r   51 TTASLGEAAARDALHHAEMSVDDIDLIIVATST   83 (324)
Q Consensus        51 ~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~   83 (324)
                      +.+|.|.++++...+    ...+.+.|||+|-.
T Consensus        41 DYPd~a~~Va~~V~~----~~~~~GIliCGTGi   69 (171)
T PRK12615         41 HYPIFGKKVGEAVVN----GQADLGVCICGTGV   69 (171)
T ss_pred             CCHHHHHHHHHHHHC----CCCCEEEEEECCCH
T ss_conf             826999999999976----99764699817857


No 338
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=21.94  E-value=54  Score=13.34  Aligned_cols=66  Identities=9%  Similarity=0.037  Sum_probs=25.4

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             9999999999997402123544336650122334589853100112202686444421012200346788899
Q gi|254780497|r   53 ASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADS  125 (324)
Q Consensus        53 ~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~  125 (324)
                      ..++.+|....+....++|+     .|-+...  .+--...++++.+|.+.+..+-.++|--|-+.|+..|+.
T Consensus        37 ~~~a~~a~~~~~~~N~~~~~-----~~P~~~~--mE~~vv~~~a~l~g~p~~~G~~tsGGTes~l~Al~aaR~  102 (375)
T PRK13520         37 HPIAREAHEMFLETNLGDPG-----LFPGTAK--LEREVVRMLGELLHLPDAYGYITSGGTEANIQAVRAARN  102 (375)
T ss_pred             HHHHHHHHHHHHHHCCCCCC-----CCHHHHH--HHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHH
T ss_conf             49999999999961789853-----3877999--999999999998099988089956189999999999976


No 339
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=21.94  E-value=51  Score=13.50  Aligned_cols=59  Identities=19%  Similarity=0.142  Sum_probs=26.0

Q ss_pred             HHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf             1102475188982898899999999999999740212354433665012233458985310011220268644
Q gi|254780497|r   34 IKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFA  106 (324)
Q Consensus        34 i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~  106 (324)
                      +.+..|.+.---...+.++..+|       |...++.|.|  -||+-+    +..++++.-|. ..|+++.++
T Consensus        42 ~a~~~g~k~av~v~sgT~AL~la-------l~al~i~~gd--eVi~p~----~tf~at~~ai~-~~Ga~pvf~  100 (379)
T PRK11658         42 FCQLTGNQHAIAVSSATAGMHIT-------LMALGIGPGD--EVITPS----QTWVSTLNMIV-LLGATPVMV  100 (379)
T ss_pred             HHHHHCCCEEEEECCHHHHHHHH-------HHHCCCCCCC--EEEECC----CCHHHHHHHHH-HCCCEEEEE
T ss_conf             99997869499976889999999-------9986988839--999899----55699999999-819989974


No 340
>pfam02261 Asp_decarbox Aspartate decarboxylase. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalysed by the enzyme aspartate decarboxylase EC:4.1.1.11 which requires a pyruvoyl group for its activity. It is synthesized initially as a proenzyme which is then proteolytically cleaved to an alpha (C-terminal) and beta (N-terminal) subunit and a pyruvoyl group. This family contains both chains of aspartate decarboxylase.
Probab=21.70  E-value=19  Score=16.20  Aligned_cols=16  Identities=13%  Similarity=0.241  Sum_probs=7.8

Q ss_pred             CCCCCEEEEECCCCCC
Q ss_conf             5565316763022432
Q gi|254780497|r  131 VVRRVMVIGSDTFSRI  146 (324)
Q Consensus       131 ~~~~~Lvv~~e~~S~~  146 (324)
                      ++.++.|+....-.|+
T Consensus        40 ~~E~V~V~Nv~NG~R~   55 (116)
T pfam02261        40 EYEKVQIVNVNNGERF   55 (116)
T ss_pred             CCCEEEEEECCCCCEE
T ss_conf             8988999989899689


No 341
>PRK05472 redox-sensing transcriptional repressor Rex; Provisional
Probab=21.52  E-value=55  Score=13.28  Aligned_cols=18  Identities=11%  Similarity=0.287  Sum_probs=8.2

Q ss_pred             HHHHCCCCCCEEEEECCC
Q ss_conf             896415565316763022
Q gi|254780497|r  126 YIRSGVVRRVMVIGSDTF  143 (324)
Q Consensus       126 li~~g~~~~~Lvv~~e~~  143 (324)
                      .+..+...++.+|++-..
T Consensus        78 iLG~~~~~~v~lvGaGnL   95 (211)
T PRK05472         78 ILGLDKTTNVALVGAGNL   95 (211)
T ss_pred             HHCCCCCCEEEEECCCHH
T ss_conf             968999750899888779


No 342
>TIGR02638 lactal_redase lactaldehyde reductase; InterPro: IPR013460    The proteins in this entry form a distinct clade of iron-containing alcohol dehydrogenases. The genes encoding these proteins are generally found in apparent operons for the catabolism of rhamnose or fucose. Catabolism of both of these monosaccharides results in the production of lactaldehydes, which are reduced by these enzymes to 1,2 propanediol . These enzymes are also sometimes called 1,2 propanediol oxidoreductases. They are active under anaerobic conditions in E. coli, while being inactivated by reactive oxygen species under aerobic conditions . Under aerobic conditions the lactaldehyde product of rhamnose and fucose catabolism is believed to be oxidized to lactate by a separate enzyme, lactaldehyde dehydrogenase..
Probab=21.48  E-value=18  Score=16.40  Aligned_cols=53  Identities=15%  Similarity=0.323  Sum_probs=22.1

Q ss_pred             CCCEEEEECCCCCHHHHHH-HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHC
Q ss_conf             7518898289889999999-99999997402123544336650122334589853100112202
Q gi|254780497|r   39 GISRRHIAGKDETTASLGE-AAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGM  101 (324)
Q Consensus        39 GI~~R~~~~~~e~~~~la~-~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl  101 (324)
                      |+++=.+.- |.+...+.+ .-+-++|+++++     ++=||-...| +  | +...|++-+..
T Consensus        28 ~~~KAlvvT-Dk~Li~~gv~~~v~~~Ld~~~~-----~Y~lfd~v~p-N--P-T~~~Vk~G~a~   81 (380)
T TIGR02638        28 GFKKALVVT-DKDLIKFGVADKVTELLDEAKI-----AYELFDEVKP-N--P-TITVVKAGVAA   81 (380)
T ss_pred             CCCCEEEEE-CHHHHHHHHHHHHHHHHHHCCC-----CHHHHCCCCC-C--C-CHHHHHHHHHH
T ss_conf             885138886-6146766579999999862278-----8346257788-9--7-58999989999


No 343
>TIGR01136 cysKM cysteine synthases; InterPro: IPR005856    This model discriminates cysteine synthases (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblance to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded.    Cysteine synthase (O-acetylserine (thiol)-lyase) is the enzyme responsible for the formation of cysteine from O-acetyl-serine and hydrogen sulphide with the concomitant release of acetic acid. In bacteria such two forms of the enzyme are known (genes cysK and cysM). CysM differs from CysK in that it can also use thiosulphate instead of sulphide, to produce cysteine thiosulphonate instead of cysteine. ; GO: 0004124 cysteine synthase activity, 0006535 cysteine biosynthetic process from serine.
Probab=21.32  E-value=56  Score=13.26  Aligned_cols=82  Identities=21%  Similarity=0.191  Sum_probs=51.0

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCEEEEECC--CC----------CC----CCCCCCC----CHHHHHHCCCCCCCCCCCCCC
Q ss_conf             9999999999740212354433665012--23----------34----5898531----001122026864444210122
Q gi|254780497|r   55 LGEAAARDALHHAEMSVDDIDLIIVATS--TP----------DQ----TFPSTAV----NIQNRLGMKRGFAFDMQAVCS  114 (324)
Q Consensus        55 la~~Aa~~al~~a~~~~~~Id~ii~~s~--~~----------~~----~~p~~a~----~i~~~LGl~~~~~~di~~~C~  114 (324)
                      .|..=..+|.++-.+.|.+.  ||=.|+  |+          .|    .+|-+-+    .+.+.+|++    +=++.+--
T Consensus        45 ~A~~MI~~AE~~G~lk~G~~--iiEaTSGNTGIaLAMvAAarGYkliL~MPetmS~ERr~~l~ayGA~----L~LT~~~~  118 (315)
T TIGR01136        45 IALNMILDAEKRGLLKPGTT--IIEATSGNTGIALAMVAAARGYKLILTMPETMSLERRKLLKAYGAE----LILTPAEE  118 (315)
T ss_pred             HHHHHHHHHHHCCCCCCCCE--EEECCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCE----EEEECCCC
T ss_conf             88999999986588788888--9842778448999999986199189985887178999999870966----98837335


Q ss_pred             CHHHHHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf             0034678889989641556531676302
Q gi|254780497|r  115 GFVYAVTTADSYIRSGVVRRVMVIGSDT  142 (324)
Q Consensus       115 ~~~~al~~A~~li~~g~~~~~Lvv~~e~  142 (324)
                      |+--|++.|..+++..+.+++++=--|+
T Consensus       119 GM~GAi~kA~el~~~~p~~~~~l~QF~N  146 (315)
T TIGR01136       119 GMKGAIDKAEELAAETPNKYVMLDQFEN  146 (315)
T ss_pred             CCHHHHHHHHHHHHHCCCCEEECCCCCC
T ss_conf             7577899999999858896210332588


No 344
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. Related proteins include the BadF/BadG/BcrA/BcrD ATPase family (pfam01869), which includes an activator for (R)-2-hydroxyglutaryl-CoA dehydratase.
Probab=21.31  E-value=56  Score=13.26  Aligned_cols=14  Identities=21%  Similarity=0.320  Sum_probs=8.3

Q ss_pred             CCCCCEEEEECCCC
Q ss_conf             35443366501223
Q gi|254780497|r   71 VDDIDLIIVATSTP   84 (324)
Q Consensus        71 ~~~Id~ii~~s~~~   84 (324)
                      +.+.|.++.+||.+
T Consensus        70 ~~~~~~vfi~~cfr   83 (404)
T TIGR03286        70 YTEADAVFIATCFR   83 (404)
T ss_pred             CCCCCEEEEEEHHC
T ss_conf             86656587720212


No 345
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily  includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which  binds to Adenosine group.  This subfamily   of proteins is predicted to  bind ATP. This domainhas  a strongly conserved motif SGGKD at the N terminus.
Probab=21.21  E-value=56  Score=13.24  Aligned_cols=58  Identities=12%  Similarity=0.224  Sum_probs=28.0

Q ss_pred             CCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf             4433665012233458985310011220268644-44210122003467888998964155653167630
Q gi|254780497|r   73 DIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFA-FDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSD  141 (324)
Q Consensus        73 ~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~-~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e  141 (324)
                      .|+.++++-...++.- .---.+++++|+..... ..        ..--.+...+++.| . .+++|+.+
T Consensus        88 gi~~vv~GdI~s~~qr-~~~e~~c~~lgl~~~~PLW~--------~~~~~ll~e~i~~G-f-~aiiv~V~  146 (194)
T cd01994          88 GVDAVVFGAILSEYQR-TRVERVCERLGLEPLAPLWG--------RDQEELLREMIEAG-F-KAIIIKVA  146 (194)
T ss_pred             CCCEEEECCCCCHHHH-HHHHHHHHHCCCEEECHHCC--------CCHHHHHHHHHHCC-C-EEEEEEEE
T ss_conf             9959999963328899-99999999739888700107--------99999999999879-9-09999950


No 346
>TIGR00761 argB acetylglutamate kinase; InterPro: IPR004662   N -Acetylglutamate (NAG) fulfils distinct biological roles in lower and higher organisms. In prokaryotes, lower eukaryotes and plants it is the first intermediate in the biosynthesis of arginine, whereas in ureotelic (excreting nitrogen mostly in the form of urea) vertebrates, it is an essential allosteric cofactor for carbamyl phosphate synthetase I (CPSI), the first enzyme of the urea cycle. The pathway that leads from glutamate to arginine in lower organisms employs eight steps, starting with the acetylation of glutamate to form NAG. In these species, NAG can be produced by two enzymatic reactions: one catalysed by NAG synthase (NAGS) and the other by ornithine acetyltransferase (OAT). In ureotelic species, NAG is produced exclusively by NAGS. In lower organisms, NAGS is feedback-inhibited by L-arginine, whereas mammalian NAGS activity is significantly enhanced by this amino acid. The NAGS genes of bacteria, fungi and mammals are more diverse than other arginine-biosynthesis and urea-cycle genes. The evolutionary relationship between the distinctly different roles of NAG and its metabolism in lower and higher organisms remains to be determined .   The pathway from glutamate to arginine is:   NAGS; N-acetylglutamate synthase (2.3.1.1 from EC) (glutamate to N-acetylglutamate) NAGK; N-acetylglutamate kinase (2.7.2.8 from EC) (N-acetylglutamate to N-acetylglutamate-5P) NAGSA; N-acetyl-gamma-glutamyl-phosphate reductase (1.2.1.38 from EC) (N-acetylglutamate-5P to N-acetylglumate semialdehyde) Acetylornithine aminotransferase (2.6.1.11 from EC) (N-acetylglumate semialdehyde to N-acetylornithine) Acetylornithine deacetylase (3.5.1.16 from EC) (N-acetylornithine to ornithine) Arginase (3.5.3.1 from EC) (ornithine to arginine) This entry describes N-acetylglutamate kinases (ArgB) of many prokaryotes and the N-acetylglutamate kinase domains of multifunctional proteins from yeasts as well as some, as yet, uncharacterised proteins.; GO: 0003991 acetylglutamate kinase activity, 0006526 arginine biosynthetic process, 0005737 cytoplasm.
Probab=21.10  E-value=56  Score=13.23  Aligned_cols=21  Identities=10%  Similarity=0.112  Sum_probs=8.7

Q ss_pred             HHHHHHCCCHHHHHHCCCCCE
Q ss_conf             999880999878110247518
Q gi|254780497|r   22 DLESIVDTSDGWIKRRVGISR   42 (324)
Q Consensus        22 el~~~~~~~~~~i~~~~GI~~   42 (324)
                      ++.+.++++++++.-..|...
T Consensus        47 ~~~~~lgi~~~f~~Gl~G~~~   67 (254)
T TIGR00761        47 ELLEALGIEPEFKNGLSGVVF   67 (254)
T ss_pred             HHHHHCCCCCEEECCCCCEEE
T ss_conf             899832898367668872037


No 347
>PRK13505 formate--tetrahydrofolate ligase; Provisional
Probab=20.84  E-value=57  Score=13.19  Aligned_cols=11  Identities=36%  Similarity=0.631  Sum_probs=6.7

Q ss_pred             EEEEECCCCCE
Q ss_conf             99997145014
Q gi|254780497|r  307 LLEAMGGGFTS  317 (324)
Q Consensus       307 ll~~~G~G~s~  317 (324)
                      +-.+.|+||-.
T Consensus       513 vrlsaGAGFiV  523 (556)
T PRK13505        513 LRPSAGAGFIV  523 (556)
T ss_pred             EEECCCCCEEE
T ss_conf             99868885699


No 348
>TIGR02698 CopY_TcrY copper transport repressor, CopY/TcrY family; InterPro: IPR014071   This family includes metal-fist type transcriptional repressors of copper transport systems such as copYZAB of Enterococcus hirae and tcrYAZB (transferable copper resistance) of an Enterococcus faecium (Streptococcus faecium) plasmid. High levels of copper can displace zinc and prevent binding by the repressor, activating efflux by copper resistance transporters. The most closely related proteins excluded by this entry are antibiotic resistance regulators including the methicillin resistance regulatory protein MecI..
Probab=20.71  E-value=50  Score=13.55  Aligned_cols=37  Identities=14%  Similarity=0.344  Sum_probs=28.8

Q ss_pred             HHHCCHHHHHHHH-HHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             0103202444557-777777888898740010001210
Q gi|254780497|r  212 IRMEGKAVFKYAV-EKAVELIEKVFDSTHLTIENIDWF  248 (324)
Q Consensus       212 ~~~~g~~~~~~~~-~~~~~~i~~~L~~~gl~~~did~~  248 (324)
                      ++..-..+|..++ +....+|..+++++.++.+||+.+
T Consensus        73 ~~~~~~~lf~~~C~~k~g~~i~~Liee~~ls~~Di~~L  110 (130)
T TIGR02698        73 VENAAEDLFSRICSKKVGNVIADLIEESTLSQDDIEKL  110 (130)
T ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf             99999999987602138999999884066787689999


No 349
>PRK04152 consensus
Probab=20.62  E-value=58  Score=13.17  Aligned_cols=28  Identities=0%  Similarity=-0.149  Sum_probs=18.8

Q ss_pred             EEEEEEEECCCCEECHHHHHHHHCCCHHHH
Q ss_conf             999999964984117889998809998781
Q gi|254780497|r    5 TVRGIGLSLPRRVLSNSDLESIVDTSDGWI   34 (324)
Q Consensus         5 ~I~~~g~ylP~~~v~~~el~~~~~~~~~~i   34 (324)
                      .|..+..|.|...+  +++.+++|.+++.|
T Consensus         6 ~i~~~~~y~~G~~i--~~~~~~~g~~p~~i   33 (364)
T PRK04152          6 FLNNLKTYEAGKPI--ELVVREYGIDPKDV   33 (364)
T ss_pred             HHCCCCCCCCCCCH--HHHHHHHCCCCCCE
T ss_conf             65389998999999--99999829681247


No 350
>pfam09663 Amido_AtzD_TrzD Amidohydrolase ring-opening protein (Amido_AtzD_TrzD). Members of this family are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (EC:3.5.2.15) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for EC:3.5.2.1 (barbiturate + water = malonate + urea) but rather catalyses the ring opening of barbiturase acid to ureidomalonic acid.
Probab=20.48  E-value=58  Score=13.15  Aligned_cols=74  Identities=22%  Similarity=0.157  Sum_probs=37.7

Q ss_pred             HHHHHHHHHHHHHHHHCC-CCCCCCEEEEECCCCCCCCCCCCCCHHHHH--HCCCCCCCCC--CCCCCCHHHHHHHHHHH
Q ss_conf             999999999999974021-235443366501223345898531001122--0268644442--10122003467888998
Q gi|254780497|r   52 TASLGEAAARDALHHAEM-SVDDIDLIIVATSTPDQTFPSTAVNIQNRL--GMKRGFAFDM--QAVCSGFVYAVTTADSY  126 (324)
Q Consensus        52 ~~~la~~Aa~~al~~a~~-~~~~Id~ii~~s~~~~~~~p~~a~~i~~~L--Gl~~~~~~di--~~~C~~~~~al~~A~~l  126 (324)
                      ..+.-++|+++++.++|+ +|.|+-+|=.-  +| -+   +...|++..  |-+ ..+-|-  +++-+-+.+||-+|.. 
T Consensus       130 qV~~vA~aV~~AM~~AGI~dpaDVH~VQvK--cP-LL---T~~~i~~A~~RG~~-~~t~dt~~SM~~SrgaSALGvAvA-  201 (365)
T pfam09663       130 QITEVAAAVKAAMADAGIADPADVHFVQVK--CP-LL---TSERIADAEARGKT-VATHDTLKSMGYSRGASALGIAVA-  201 (365)
T ss_pred             HHHHHHHHHHHHHHHCCCCCHHHEEEEEEC--CC-CC---CHHHHHHHHHCCCC-EEECCCCCCCCCCCCHHHHHHHHH-
T ss_conf             999999999999997399986770379841--77-56---77788888846984-024475210133454148889998-


Q ss_pred             HHHCCCCCC
Q ss_conf             964155653
Q gi|254780497|r  127 IRSGVVRRV  135 (324)
Q Consensus       127 i~~g~~~~~  135 (324)
                        .|.+..-
T Consensus       202 --LGEv~~~  208 (365)
T pfam09663       202 --LGEVPAA  208 (365)
T ss_pred             --HCCCCHH
T ss_conf             --5565623


No 351
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=20.47  E-value=50  Score=13.56  Aligned_cols=57  Identities=12%  Similarity=0.085  Sum_probs=25.4

Q ss_pred             HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             999999974021235443366501223345898531001122026864444210122003467888
Q gi|254780497|r   58 AAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTA  123 (324)
Q Consensus        58 ~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A  123 (324)
                      +...+.|.+.||++++- .|||....  ....+-..++.+.+|.++...+      .|++.++..+
T Consensus        73 ~~~~~~l~~lGI~~~~~-VVvYd~~~--~~~A~R~~W~L~~~Gh~~V~iL------dGG~~~W~~~  129 (281)
T PRK11493         73 EAFAVAMRELGVNQDKH-LVVYDEGN--LFSAPRAWWMLRTFGVEKVSIL------AGGLAGWQRD  129 (281)
T ss_pred             HHHHHHHHHCCCCCCCE-EEEECCCC--CCHHHHHHHHHHHCCCCCEEEC------CCCHHHHHHC
T ss_conf             99999999779999898-99987985--4089999999998399983687------7738889874


No 352
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=20.39  E-value=58  Score=13.13  Aligned_cols=59  Identities=14%  Similarity=0.179  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHHHHHC-CCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHH
Q ss_conf             999999999997402-12354433665012233458985310011220268644442101220034
Q gi|254780497|r   54 SLGEAAARDALHHAE-MSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVY  118 (324)
Q Consensus        54 ~la~~Aa~~al~~a~-~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~  118 (324)
                      +-|.+|.+++.++.+ .+++|.|++|.-.--+..+      ...+.+.-.+.+.+-|+.|=.||+.
T Consensus         5 ~~a~~a~~~l~~~y~~~~~~eaDliIvlGGDGT~L------~a~r~~~~~~~PilGIN~G~lGFL~   64 (246)
T PRK04761          5 PEAQAALEELVKRYGDVPIEEADVIVALGGDGFML------QTLHRYMNSGKPVYGMNRGTVGFLM   64 (246)
T ss_pred             HHHHHHHHHHHHHHCCCCHHHCCEEEEECCCHHHH------HHHHHHHCCCCCEEEEECCCCCCCC
T ss_conf             89999999999985899965799999989879999------9999874149937989779777544


No 353
>KOG3157 consensus
Probab=20.37  E-value=55  Score=13.27  Aligned_cols=31  Identities=35%  Similarity=0.550  Sum_probs=18.8

Q ss_pred             HHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf             899999971978767336586519330126999999
Q gi|254780497|r  257 IINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALA  292 (324)
Q Consensus       257 ~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~  292 (324)
                      ..+.+++++|+|+|++--.+   |  -|+|-..++.
T Consensus       191 ~r~~ic~~lg~~~dq~eLSM---G--MS~DF~~AIe  221 (244)
T KOG3157         191 LRESICKKLGIPADQVELSM---G--MSADFLLAIE  221 (244)
T ss_pred             HHHHHHHHHCCCHHHHHHHC---C--CCHHHHHHHH
T ss_conf             99999998489867810023---5--6366999998


No 354
>PRK10729 nudF ADP-ribose pyrophosphatase NudF; Provisional
Probab=20.28  E-value=58  Score=13.12  Aligned_cols=18  Identities=6%  Similarity=0.041  Sum_probs=10.9

Q ss_pred             HHHHHHHHHHCCCCCCCC
Q ss_conf             788889874001000121
Q gi|254780497|r  230 LIEKVFDSTHLTIENIDW  247 (324)
Q Consensus       230 ~i~~~L~~~gl~~~did~  247 (324)
                      +.+++.+++|+.+.++..
T Consensus       101 A~REl~EEtG~~~~~l~~  118 (202)
T PRK10729        101 ARREAIEEAGLIVGRTKP  118 (202)
T ss_pred             HHHHHHHHHCCCCCCEEE
T ss_conf             999988875958052899


Done!