Query gi|254780497|ref|YP_003064910.1| 3-oxoacyl-(acyl carrier protein) synthase III [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 324
No_of_seqs 136 out of 4322
Neff 8.6
Searched_HMMs 39220
Date Sun May 29 23:33:01 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780497.hhm -d /home/congqian_1/database/cdd/Cdd.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 0 0 620.0 18.8 319 2-324 1-329 (329)
2 PRK09352 3-oxoacyl-(acyl carri 100.0 0 0 567.2 27.9 317 1-324 1-319 (319)
3 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 0 0 566.6 24.5 318 1-324 1-322 (323)
4 PRK07515 3-oxoacyl-(acyl carri 100.0 0 0 550.8 22.1 317 2-324 1-371 (372)
5 PRK12879 3-oxoacyl-(acyl carri 100.0 0 0 542.7 26.9 318 1-324 2-325 (326)
6 PRK07204 3-oxoacyl-(acyl carri 100.0 0 0 543.6 25.7 317 1-324 1-329 (329)
7 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 0 0 538.6 27.2 315 4-324 1-325 (327)
8 PRK05963 3-oxoacyl-(acyl carri 100.0 0 0 535.1 25.8 317 1-323 2-326 (327)
9 PRK12880 3-oxoacyl-(acyl carri 100.0 0 0 530.6 24.7 311 1-324 5-338 (353)
10 cd00830 KAS_III Ketoacyl-acyl 100.0 0 0 523.2 26.6 314 3-322 1-320 (320)
11 PRK09258 3-oxoacyl-(acyl carri 100.0 0 0 524.8 22.9 315 4-324 1-339 (339)
12 PRK06840 hypothetical protein; 100.0 0 0 519.5 25.8 316 2-324 3-335 (337)
13 PRK06816 3-oxoacyl-(acyl carri 100.0 0 0 516.8 23.5 320 2-323 1-376 (378)
14 PRK04262 hypothetical protein; 100.0 0 0 453.4 25.2 305 2-324 1-308 (346)
15 cd00827 init_cond_enzymes "ini 100.0 0 0 434.4 24.2 312 3-322 1-324 (324)
16 cd00831 CHS_like Chalcone and 100.0 0 0 424.3 24.1 314 3-322 1-361 (361)
17 COG3425 PksG 3-hydroxy-3-methy 100.0 2.8E-45 0 308.2 21.0 299 2-317 1-303 (377)
18 COG3424 BcsA Predicted naringe 100.0 8.1E-43 0 293.0 21.0 314 4-324 2-352 (356)
19 cd00327 cond_enzymes Condensin 100.0 8.5E-39 2.2E-43 267.4 13.5 239 47-322 2-254 (254)
20 TIGR01835 HMG-CoA-S_prok hydro 100.0 8.3E-37 2.1E-41 254.6 11.8 296 4-316 1-338 (412)
21 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 1.2E-32 3E-37 228.1 12.1 300 4-319 2-304 (347)
22 pfam00195 Chal_sti_synt_N Chal 99.9 2.1E-27 5.5E-32 194.6 11.2 168 3-171 16-228 (228)
23 TIGR01833 HMG-CoA-S_euk hydrox 99.9 8.2E-25 2.1E-29 178.1 15.3 302 2-319 3-373 (461)
24 pfam01154 HMG_CoA_synt_N Hydro 99.9 4.5E-24 1.1E-28 173.4 12.7 165 3-171 1-170 (171)
25 KOG1393 consensus 99.9 9.2E-23 2.3E-27 165.0 16.0 304 3-322 11-374 (462)
26 pfam08541 ACP_syn_III_C 3-Oxoa 99.9 2.5E-24 6.4E-29 175.0 7.2 90 235-324 1-90 (90)
27 pfam08392 FAE1_CUT1_RppA FAE1/ 99.8 1.3E-19 3.3E-24 144.9 13.2 198 3-201 8-239 (290)
28 cd00825 decarbox_cond_enzymes 99.7 3.3E-17 8.5E-22 129.6 12.4 245 52-320 11-330 (332)
29 cd00751 thiolase Thiolase are 99.7 7.1E-17 1.8E-21 127.4 12.7 99 48-146 18-117 (386)
30 cd00829 SCP-x_thiolase Thiolas 99.7 2.3E-16 5.8E-21 124.2 14.8 202 47-270 11-296 (375)
31 PRK07314 3-oxoacyl-(acyl carri 99.7 1.3E-15 3.4E-20 119.3 17.0 298 2-324 2-410 (411)
32 PRK07103 polyketide beta-ketoa 99.7 7E-15 1.8E-19 114.7 18.1 295 1-323 6-413 (415)
33 PRK06365 acetyl-CoA acetyltran 99.7 2E-14 5E-19 111.9 20.2 288 1-323 1-413 (415)
34 PRK07516 acetyl-CoA acetyltran 99.7 7.6E-15 1.9E-19 114.5 17.9 270 1-323 1-386 (389)
35 PRK05952 3-oxoacyl-(acyl carri 99.7 1.2E-14 3.1E-19 113.2 18.5 288 1-323 1-378 (379)
36 cd00834 KAS_I_II Beta-ketoacyl 99.7 3.3E-15 8.5E-20 116.8 15.4 273 2-300 1-360 (406)
37 PRK12578 acetyl-CoA acetyltran 99.7 7.9E-15 2E-19 114.4 17.3 255 48-323 17-384 (385)
38 PRK06059 lipid-transfer protei 99.7 8E-15 2E-19 114.4 17.0 263 49-322 20-397 (399)
39 PRK06333 3-oxoacyl-(acyl carri 99.7 2.3E-14 5.8E-19 111.4 18.9 297 2-324 4-422 (424)
40 PRK08235 acetyl-CoA acetyltran 99.7 1.3E-15 3.3E-20 119.4 12.3 99 48-146 22-121 (393)
41 PRK07800 consensus 99.7 4E-15 1E-19 116.3 14.2 100 47-146 21-121 (393)
42 PRK05790 acetyl-CoA acetyltran 99.7 2.9E-15 7.5E-20 117.1 13.2 99 48-146 22-121 (393)
43 PRK06845 consensus 99.7 2.8E-15 7.1E-20 117.3 12.5 99 48-146 22-122 (392)
44 PRK08256 lipid-transfer protei 99.7 6.3E-15 1.6E-19 115.0 14.1 255 48-323 18-389 (391)
45 pfam08545 ACP_syn_III 3-Oxoacy 99.7 1.6E-16 4.2E-21 125.2 5.9 80 107-191 1-80 (80)
46 PTZ00050 3-oxoacyl-acyl carrie 99.6 1.6E-14 4.1E-19 112.4 15.9 296 3-323 62-473 (477)
47 PRK06501 3-oxoacyl-(acyl carri 99.6 4E-14 1E-18 109.9 17.8 299 3-324 12-423 (425)
48 PRK07910 3-oxoacyl-(acyl carri 99.6 4.5E-14 1.2E-18 109.6 17.9 298 1-324 11-418 (418)
49 pfam02797 Chal_sti_synt_C Chal 99.6 5.1E-16 1.3E-20 122.0 7.9 107 217-323 32-148 (151)
50 PRK06064 acetyl-CoA acetyltran 99.6 1.3E-14 3.4E-19 112.9 15.0 202 48-269 18-302 (389)
51 PRK06157 acetyl-CoA acetyltran 99.6 5.9E-14 1.5E-18 108.8 17.8 247 48-313 23-383 (400)
52 PRK08722 3-oxoacyl-(acyl carri 99.6 4.7E-14 1.2E-18 109.4 17.2 297 2-323 4-412 (414)
53 PRK07967 3-oxoacyl-(acyl carri 99.6 6.3E-14 1.6E-18 108.6 17.8 292 1-324 1-404 (406)
54 PRK06364 consensus 99.6 7.7E-14 2E-18 108.1 18.2 254 48-322 21-387 (389)
55 PRK08768 consensus 99.6 3.9E-14 1E-18 110.0 16.6 298 1-323 1-409 (411)
56 TIGR03150 fabF 3-oxoacyl-[acyl 99.6 6.8E-14 1.7E-18 108.4 17.4 297 2-323 1-407 (407)
57 PRK06289 acetyl-CoA acetyltran 99.6 7.1E-14 1.8E-18 108.3 17.2 102 43-144 17-121 (408)
58 PRK08371 consensus 99.6 1.1E-13 2.8E-18 107.1 17.8 274 1-323 1-386 (388)
59 PRK07801 acetyl-CoA acetyltran 99.6 2.5E-14 6.3E-19 111.2 14.0 100 47-146 21-122 (382)
60 PRK06158 thiolase; Provisional 99.6 2.5E-13 6.4E-18 104.8 17.9 248 47-322 23-378 (384)
61 PRK06954 acetyl-CoA acetyltran 99.6 3E-14 7.6E-19 110.7 12.8 99 48-146 27-126 (397)
62 PRK09185 3-oxoacyl-(acyl carri 99.6 1.8E-13 4.6E-18 105.7 16.2 291 1-323 2-392 (395)
63 PRK07851 acetyl-CoA acetyltran 99.6 8.7E-14 2.2E-18 107.7 13.3 100 47-146 22-123 (405)
64 PRK07491 consensus 99.6 7.4E-14 1.9E-18 108.2 12.8 100 47-146 22-122 (392)
65 PRK08041 consensus 99.6 8.5E-14 2.2E-18 107.8 13.1 100 47-146 21-121 (391)
66 PRK06363 consensus 99.6 5.5E-13 1.4E-17 102.7 17.1 201 49-269 19-302 (387)
67 cd00826 nondecarbox_cond_enzym 99.6 9.9E-14 2.5E-18 107.4 13.1 98 48-145 19-117 (393)
68 PRK06366 acetyl-CoA acetyltran 99.6 6.4E-14 1.6E-18 108.6 11.9 100 47-146 21-121 (388)
69 PRK07124 consensus 99.6 3.5E-14 8.8E-19 110.3 10.3 99 48-146 22-121 (402)
70 cd00828 elong_cond_enzymes "el 99.6 9.4E-13 2.4E-17 101.1 17.4 293 3-321 2-406 (407)
71 PRK08313 acetyl-CoA acetyltran 99.5 2.7E-12 6.9E-17 98.2 18.7 250 48-322 21-383 (391)
72 PRK09051 beta-ketothiolase; Pr 99.5 2E-13 5E-18 105.5 12.8 100 47-146 22-123 (394)
73 PRK08439 3-oxoacyl-(acyl carri 99.5 1.8E-12 4.6E-17 99.3 17.4 288 1-323 1-403 (405)
74 PRK06065 acetyl-CoA acetyltran 99.5 1.9E-12 4.8E-17 99.2 16.9 254 48-323 26-392 (393)
75 PRK08242 acetyl-CoA acetyltran 99.5 9.8E-13 2.5E-17 101.1 15.4 100 47-146 23-124 (402)
76 PRK08142 acetyl-CoA acetyltran 99.5 1.6E-12 4.2E-17 99.6 16.4 251 47-323 20-386 (388)
77 PRK09116 3-oxoacyl-(acyl carri 99.5 1.2E-12 2.9E-17 100.6 15.2 243 52-323 4-336 (336)
78 PRK08131 acetyl-CoA acetyltran 99.5 3.3E-13 8.3E-18 104.1 12.3 100 47-146 21-122 (401)
79 PRK06445 acetyl-CoA acetyltran 99.5 6E-13 1.5E-17 102.4 13.4 99 48-146 28-128 (394)
80 smart00825 PKS_KS Beta-ketoacy 99.5 1.6E-13 4.1E-18 106.0 10.3 222 55-300 90-367 (424)
81 PRK06504 acetyl-CoA acetyltran 99.5 1.6E-13 4.1E-18 106.1 10.1 273 47-323 21-388 (390)
82 PRK07025 consensus 99.5 3.4E-13 8.6E-18 104.0 11.6 99 48-146 22-121 (393)
83 PRK06205 acetyl-CoA acetyltran 99.5 9.5E-13 2.4E-17 101.1 13.8 99 48-146 22-121 (404)
84 PRK07850 acetyl-CoA acetyltran 99.5 7.9E-13 2E-17 101.6 12.9 272 47-322 21-384 (387)
85 cd00832 CLF Chain-length facto 99.5 1.4E-12 3.5E-17 100.1 14.0 267 2-299 1-352 (399)
86 PRK05656 acetyl-CoA acetyltran 99.5 3E-12 7.5E-17 98.0 15.2 100 47-146 21-121 (392)
87 PRK07108 acetyl-CoA acetyltran 99.5 1.5E-12 3.8E-17 99.9 13.5 100 47-146 22-123 (392)
88 PRK08963 fadI 3-ketoacyl-CoA t 99.5 2.5E-12 6.4E-17 98.4 14.5 100 47-146 32-132 (436)
89 PRK06147 3-oxoacyl-(acyl carri 99.5 4.3E-11 1.1E-15 90.5 20.5 248 52-324 64-340 (346)
90 PRK06025 acetyl-CoA acetyltran 99.5 8E-12 2E-16 95.2 16.6 99 47-145 24-124 (417)
91 cd00833 PKS polyketide synthas 99.5 7.5E-13 1.9E-17 101.8 11.4 223 54-300 89-367 (421)
92 PRK06633 acetyl-CoA acetyltran 99.5 5.5E-12 1.4E-16 96.2 15.4 99 47-145 22-121 (392)
93 PRK08947 fadA 3-ketoacyl-CoA t 99.5 2E-12 5.1E-17 99.1 12.6 100 47-146 22-124 (387)
94 PRK08170 acetyl-CoA acetyltran 99.4 1.7E-12 4.4E-17 99.5 11.7 99 48-146 23-122 (426)
95 PRK09050 beta-ketoadipyl CoA t 99.4 1.3E-12 3.4E-17 100.2 11.0 100 47-146 21-123 (401)
96 PRK06689 consensus 99.4 1E-12 2.6E-17 100.9 9.9 100 47-146 21-121 (391)
97 PRK07937 lipid-transfer protei 99.4 3.6E-11 9.1E-16 91.1 16.9 259 1-319 1-344 (352)
98 PRK08234 consensus 99.4 1.8E-12 4.6E-17 99.4 10.1 99 48-146 22-123 (400)
99 PRK09268 acetyl-CoA acetyltran 99.4 1.6E-11 4.2E-16 93.2 14.2 100 47-146 26-126 (428)
100 PRK07855 lipid-transfer protei 99.4 5.2E-11 1.3E-15 90.1 16.3 253 48-322 20-385 (386)
101 PRK09052 acetyl-CoA acetyltran 99.3 1.3E-11 3.3E-16 93.9 10.5 270 48-320 27-395 (399)
102 PRK07661 acetyl-CoA acetyltran 99.3 6.1E-11 1.5E-15 89.6 13.6 99 47-146 16-116 (384)
103 TIGR02845 spore_V_AD stage V s 99.3 2.2E-11 5.5E-16 92.5 11.2 235 49-316 42-311 (331)
104 PRK06066 acetyl-CoA acetyltran 99.3 2.6E-10 6.7E-15 85.5 16.6 248 1-305 1-354 (375)
105 PRK13359 beta-ketoadipyl CoA t 99.3 1E-10 2.6E-15 88.2 14.0 100 47-146 21-123 (400)
106 PRK06690 acetyl-CoA acetyltran 99.2 2.4E-10 6.2E-15 85.8 12.3 267 47-322 20-357 (361)
107 COG3321 Polyketide synthase mo 99.2 1.9E-09 4.8E-14 80.1 14.2 215 55-293 94-360 (1061)
108 COG0304 FabB 3-oxoacyl-(acyl-c 99.2 7.1E-10 1.8E-14 82.8 11.8 231 1-256 2-307 (412)
109 pfam00109 ketoacyl-synt Beta-k 99.1 9.2E-10 2.4E-14 82.1 9.0 167 3-171 3-241 (243)
110 pfam00108 Thiolase_N Thiolase, 99.1 3.9E-10 9.8E-15 84.5 6.5 100 47-146 21-121 (264)
111 PRK08304 stage V sporulation p 99.0 1.1E-08 2.9E-13 75.1 13.3 232 52-316 56-314 (336)
112 pfam07451 SpoVAD Stage V sporu 99.0 1.4E-08 3.6E-13 74.5 13.8 232 52-316 51-309 (329)
113 TIGR01930 AcCoA-C-Actrans acet 99.0 5.2E-10 1.3E-14 83.6 6.1 101 47-147 19-122 (447)
114 PRK06519 3-oxoacyl-(acyl carri 99.0 2.3E-08 5.7E-13 73.2 13.8 265 2-302 6-361 (397)
115 PRK12404 stage V sporulation p 99.0 3.2E-08 8.3E-13 72.2 13.1 232 52-316 54-312 (334)
116 KOG1394 consensus 98.9 9.4E-09 2.4E-13 75.6 9.6 232 1-256 23-332 (440)
117 KOG1390 consensus 98.8 3.1E-07 7.8E-12 66.0 13.4 269 48-323 26-394 (396)
118 KOG1389 consensus 98.8 1.3E-07 3.3E-12 68.3 11.5 272 47-321 56-421 (435)
119 PRK08257 acetyl-CoA acetyltran 98.8 1E-06 2.5E-11 62.7 15.0 96 48-144 25-121 (502)
120 KOG1202 consensus 98.7 4.5E-07 1.1E-11 64.9 11.7 295 2-322 11-413 (2376)
121 KOG1406 consensus 98.7 9E-09 2.3E-13 75.7 2.5 95 48-145 25-119 (408)
122 KOG1391 consensus 98.5 3.8E-06 9.6E-11 59.0 11.6 96 47-145 23-123 (396)
123 COG0183 PaaJ Acetyl-CoA acetyl 98.4 5.9E-07 1.5E-11 64.1 5.4 99 49-147 24-126 (392)
124 pfam08540 HMG_CoA_synt_C Hydro 98.3 1.3E-05 3.3E-10 55.6 10.8 110 213-322 29-199 (282)
125 KOG1392 consensus 98.3 1.6E-06 4.1E-11 61.4 5.4 107 39-145 49-160 (465)
126 TIGR02813 omega_3_PfaA polyket 96.6 0.003 7.6E-08 40.5 4.4 187 55-268 141-359 (2773)
127 pfam00195 Chal_sti_synt_N Chal 96.6 0.015 3.8E-07 36.1 7.7 88 221-311 100-191 (228)
128 pfam02803 Thiolase_C Thiolase, 96.3 0.021 5.4E-07 35.1 7.1 93 227-323 24-122 (123)
129 cd00831 CHS_like Chalcone and 96.2 0.028 7.2E-07 34.3 7.3 11 61-71 42-52 (361)
130 TIGR01930 AcCoA-C-Actrans acet 96.2 0.0031 8E-08 40.4 2.4 79 228-307 331-431 (447)
131 PRK05963 3-oxoacyl-(acyl carri 95.5 0.016 4.1E-07 35.8 3.7 17 229-245 259-275 (327)
132 TIGR02845 spore_V_AD stage V s 95.3 0.04 1E-06 33.3 5.2 66 225-300 52-125 (331)
133 PRK12879 3-oxoacyl-(acyl carri 95.3 0.046 1.2E-06 33.0 5.5 14 231-244 259-272 (326)
134 PRK13359 beta-ketoadipyl CoA t 95.3 0.15 3.7E-06 29.7 8.0 93 227-323 298-398 (400)
135 PRK09258 3-oxoacyl-(acyl carri 95.3 0.017 4.3E-07 35.7 3.2 16 257-272 245-260 (339)
136 pfam08392 FAE1_CUT1_RppA FAE1/ 95.2 0.07 1.8E-06 31.8 6.2 34 135-168 107-151 (290)
137 PRK06816 3-oxoacyl-(acyl carri 94.9 0.11 2.7E-06 30.6 6.4 37 257-296 277-313 (378)
138 cd00830 KAS_III Ketoacyl-acyl 94.9 0.12 3.1E-06 30.2 6.6 16 230-245 255-270 (320)
139 PRK09352 3-oxoacyl-(acyl carri 94.8 0.11 2.8E-06 30.5 6.2 14 258-271 226-239 (319)
140 PRK07491 consensus 94.7 0.21 5.3E-06 28.8 7.3 91 228-322 293-389 (392)
141 PRK06205 acetyl-CoA acetyltran 94.6 0.18 4.5E-06 29.2 6.8 92 228-323 301-401 (404)
142 CHL00203 fabH 3-oxoacyl-acyl-c 94.5 0.074 1.9E-06 31.6 4.8 16 230-245 258-273 (327)
143 PRK06845 consensus 94.5 0.23 5.7E-06 28.5 7.2 92 228-323 293-390 (392)
144 PRK08234 consensus 94.4 0.23 6E-06 28.4 7.2 93 227-323 299-397 (400)
145 PRK08242 acetyl-CoA acetyltran 94.2 0.32 8.1E-06 27.6 7.4 91 228-322 303-399 (402)
146 cd00327 cond_enzymes Condensin 94.1 0.082 2.1E-06 31.3 4.3 27 54-80 145-171 (254)
147 COG3424 BcsA Predicted naringe 94.1 0.17 4.3E-06 29.4 5.9 18 153-170 227-244 (356)
148 PRK06504 acetyl-CoA acetyltran 94.1 0.23 5.8E-06 28.5 6.5 15 157-171 246-260 (390)
149 PRK07204 3-oxoacyl-(acyl carri 94.0 0.059 1.5E-06 32.2 3.3 11 260-270 238-248 (329)
150 PRK06840 hypothetical protein; 93.9 0.072 1.8E-06 31.7 3.7 16 257-272 242-257 (337)
151 PRK07851 acetyl-CoA acetyltran 93.9 0.32 8.3E-06 27.5 7.0 91 228-321 305-401 (405)
152 PRK07801 acetyl-CoA acetyltran 93.9 0.29 7.4E-06 27.8 6.8 91 228-322 283-379 (382)
153 PRK05952 3-oxoacyl-(acyl carri 93.8 0.32 8.1E-06 27.6 6.9 14 69-82 158-171 (379)
154 PRK08131 acetyl-CoA acetyltran 93.7 0.52 1.3E-05 26.2 7.7 92 228-323 299-398 (401)
155 PRK07855 lipid-transfer protei 93.6 0.22 5.5E-06 28.7 5.7 16 1-17 1-18 (386)
156 PRK08041 consensus 93.6 0.43 1.1E-05 26.8 7.2 92 228-323 293-390 (391)
157 PRK06633 acetyl-CoA acetyltran 93.5 0.37 9.5E-06 27.1 6.8 93 227-323 292-390 (392)
158 PRK07850 acetyl-CoA acetyltran 93.5 0.34 8.7E-06 27.4 6.5 16 157-172 243-258 (387)
159 PRK09052 acetyl-CoA acetyltran 93.4 0.36 9.2E-06 27.2 6.5 17 157-173 255-271 (399)
160 PRK09050 beta-ketoadipyl CoA t 93.3 0.37 9.3E-06 27.2 6.5 91 228-322 300-398 (401)
161 pfam02803 Thiolase_C Thiolase, 93.3 0.22 5.5E-06 28.6 5.3 99 49-169 14-123 (123)
162 PRK06445 acetyl-CoA acetyltran 93.3 0.52 1.3E-05 26.2 7.2 91 228-322 295-391 (394)
163 PRK05656 acetyl-CoA acetyltran 93.3 0.4 1E-05 27.0 6.6 93 227-323 293-391 (392)
164 PRK04262 hypothetical protein; 93.2 0.12 3E-06 30.4 3.7 26 56-81 211-236 (346)
165 PRK09185 3-oxoacyl-(acyl carri 93.1 0.47 1.2E-05 26.5 6.8 13 70-82 175-187 (395)
166 PRK08170 acetyl-CoA acetyltran 93.1 0.17 4.2E-06 29.4 4.4 92 228-323 310-424 (426)
167 pfam02801 Ketoacyl-synt_C Beta 93.0 0.26 6.7E-06 28.1 5.4 78 225-302 25-112 (117)
168 PRK07515 3-oxoacyl-(acyl carri 92.9 0.49 1.2E-05 26.4 6.5 16 258-273 277-292 (372)
169 PRK06690 acetyl-CoA acetyltran 92.7 0.37 9.3E-06 27.2 5.8 17 157-173 216-232 (361)
170 PRK08257 acetyl-CoA acetyltran 92.7 0.34 8.6E-06 27.4 5.6 89 225-316 294-391 (502)
171 PRK07937 lipid-transfer protei 92.7 0.21 5.4E-06 28.7 4.5 27 52-78 138-164 (352)
172 PRK06501 3-oxoacyl-(acyl carri 92.6 0.44 1.1E-05 26.7 6.0 10 72-81 192-201 (425)
173 pfam08541 ACP_syn_III_C 3-Oxoa 92.5 0.055 1.4E-06 32.4 1.3 69 64-140 1-77 (90)
174 PRK07661 acetyl-CoA acetyltran 92.4 0.47 1.2E-05 26.5 6.0 92 228-323 285-382 (384)
175 PRK06954 acetyl-CoA acetyltran 92.4 0.38 9.8E-06 27.1 5.5 92 228-323 298-395 (397)
176 TIGR02446 FadI acetyl-CoA C-ac 91.9 0.13 3.4E-06 30.0 2.6 94 48-142 27-122 (430)
177 cd00829 SCP-x_thiolase Thiolas 91.9 0.63 1.6E-05 25.7 6.1 19 226-244 279-297 (375)
178 COG0332 FabH 3-oxoacyl-[acyl-c 91.9 0.64 1.6E-05 25.6 6.1 12 260-271 231-242 (323)
179 PRK06689 consensus 91.8 0.38 9.6E-06 27.1 4.9 93 227-323 291-389 (391)
180 cd00826 nondecarbox_cond_enzym 91.7 0.71 1.8E-05 25.4 6.2 43 228-270 272-314 (393)
181 PRK07025 consensus 91.1 0.3 7.5E-06 27.8 3.8 92 228-323 294-391 (393)
182 PRK06158 thiolase; Provisional 90.5 0.24 6E-06 28.4 2.8 13 3-16 9-21 (384)
183 PRK12578 acetyl-CoA acetyltran 90.4 0.8 2E-05 25.0 5.4 13 3-15 2-14 (385)
184 PRK09051 beta-ketothiolase; Pr 90.3 0.52 1.3E-05 26.2 4.5 92 227-321 294-391 (394)
185 PRK08947 fadA 3-ketoacyl-CoA t 89.6 0.62 1.6E-05 25.7 4.4 90 228-321 285-384 (387)
186 PRK12880 3-oxoacyl-(acyl carri 89.6 0.75 1.9E-05 25.2 4.8 23 229-251 273-295 (353)
187 cd00751 thiolase Thiolase are 89.3 0.63 1.6E-05 25.7 4.2 96 228-323 288-385 (386)
188 cd00832 CLF Chain-length facto 89.1 0.71 1.8E-05 25.4 4.3 84 231-318 311-396 (399)
189 PRK08371 consensus 88.2 0.27 6.8E-06 28.1 1.7 19 59-77 148-166 (388)
190 PRK09268 acetyl-CoA acetyltran 87.5 0.26 6.6E-06 28.1 1.3 91 228-322 313-426 (428)
191 PRK08256 lipid-transfer protei 87.5 0.38 9.6E-06 27.1 2.1 34 2-35 1-45 (391)
192 PRK06065 acetyl-CoA acetyltran 87.2 0.51 1.3E-05 26.3 2.6 20 3-23 11-33 (393)
193 PRK13944 protein-L-isoaspartat 87.0 1.7 4.3E-05 23.0 5.2 31 88-119 57-88 (205)
194 pfam01135 PCMT Protein-L-isoas 85.9 2 5.2E-05 22.4 5.2 25 88-112 58-83 (205)
195 PRK13942 protein-L-isoaspartat 85.9 2.1 5.3E-05 22.4 5.2 32 88-120 61-93 (214)
196 TIGR02470 sucr_synth sucrose s 85.8 0.42 1.1E-05 26.8 1.6 124 5-135 316-462 (790)
197 TIGR02430 pcaF beta-ketoadipyl 84.8 0.75 1.9E-05 25.2 2.5 95 51-145 24-121 (400)
198 TIGR02482 PFKA_ATP 6-phosphofr 84.8 2.1 5.3E-05 22.4 4.8 13 299-311 276-288 (302)
199 pfam03377 Avirulence Xanthomon 84.2 3.3 8.3E-05 21.1 6.6 45 233-277 203-254 (289)
200 COG0013 AlaS Alanyl-tRNA synth 83.3 1.5 3.8E-05 23.3 3.5 13 301-313 651-663 (879)
201 PRK13410 molecular chaperone D 82.5 2.2 5.7E-05 22.2 4.2 46 223-268 307-355 (719)
202 PRK08197 threonine synthase; V 79.5 4.8 0.00012 20.0 5.2 64 256-319 310-384 (402)
203 PRK00290 dnaK molecular chaper 79.4 3.6 9.2E-05 20.8 4.4 50 222-271 306-358 (631)
204 cd01451 vWA_Magnesium_chelatas 79.1 4.9 0.00013 20.0 6.5 73 50-129 16-91 (178)
205 PRK00312 pcm protein-L-isoaspa 77.2 2.4 6.1E-05 22.0 2.9 33 87-120 62-95 (213)
206 pfam01295 Adenylate_cycl Adeny 76.8 3 7.7E-05 21.3 3.4 29 47-76 413-441 (830)
207 PRK13943 protein-L-isoaspartat 76.0 2.7 7E-05 21.6 2.9 22 122-143 115-136 (317)
208 PRK03673 competence damage-ind 76.0 6.1 0.00015 19.4 6.5 83 1-102 1-89 (396)
209 PRK07591 threonine synthase; V 75.5 4.7 0.00012 20.1 4.1 68 249-316 314-393 (422)
210 CHL00094 dnaK heat shock prote 75.3 4.3 0.00011 20.3 3.8 49 222-270 306-357 (622)
211 PRK13411 molecular chaperone D 74.7 6.5 0.00017 19.2 4.8 42 224-265 307-351 (655)
212 TIGR00151 ispF 2C-methyl-D-ery 74.7 2.9 7.4E-05 21.4 2.8 58 227-284 79-145 (159)
213 PTZ00186 heat shock 70 kDa pre 73.5 5.3 0.00014 19.8 3.9 30 225-254 334-363 (657)
214 PRK00055 ribonuclease Z; Revie 72.6 4.8 0.00012 20.1 3.5 68 1-88 1-68 (259)
215 TIGR02445 fadA acetyl-CoA C-ac 72.3 2.6 6.7E-05 21.7 2.1 94 49-143 22-119 (385)
216 PRK09585 anmK anhydro-N-acetyl 71.9 7.6 0.00019 18.8 4.5 60 53-112 70-139 (366)
217 TIGR02288 PaaN_2 phenylacetic 70.3 8.2 0.00021 18.6 4.5 81 51-142 239-324 (560)
218 PRK05183 hscA chaperone protei 69.5 4.9 0.00012 20.0 3.0 48 223-270 312-362 (621)
219 PRK09604 putative DNA-binding/ 69.3 8.6 0.00022 18.4 4.4 33 57-91 56-88 (335)
220 PRK05638 threonine synthase; V 68.3 9.1 0.00023 18.3 7.0 68 249-316 280-358 (443)
221 PRK09450 cyaA adenylate cyclas 68.0 6.5 0.00017 19.2 3.4 30 47-77 408-437 (833)
222 TIGR01751 crot-CoA-red crotony 67.7 4.5 0.00011 20.3 2.5 29 288-317 378-407 (409)
223 PRK08942 D,D-heptose 1,7-bisph 67.0 8.8 0.00022 18.4 3.9 50 225-275 68-126 (181)
224 pfam03702 UPF0075 Uncharacteri 65.8 10 0.00026 18.0 4.1 58 54-112 68-138 (363)
225 PTZ00009 heat shock 70 kDa pro 65.5 8.7 0.00022 18.4 3.6 28 227-254 315-342 (657)
226 PRK11762 nudE ADP-ribose dipho 65.0 9.2 0.00023 18.3 3.6 21 58-78 92-112 (185)
227 pfam00814 Peptidase_M22 Glycop 64.4 11 0.00027 17.9 3.9 25 57-81 33-57 (225)
228 PRK09605 O-sialoglycoprotein e 63.9 11 0.00028 17.7 3.9 87 56-151 53-143 (536)
229 PRK06260 threonine synthase; V 63.3 11 0.00029 17.7 4.0 62 256-317 301-373 (400)
230 PRK07409 threonine synthase; V 63.1 11 0.00029 17.7 4.2 36 282-317 289-324 (350)
231 KOG2707 consensus 62.8 9.9 0.00025 18.0 3.5 29 58-87 88-116 (405)
232 COG3072 CyaA Adenylate cyclase 62.6 4 0.0001 20.6 1.4 18 19-36 354-371 (853)
233 PRK09275 aspartate aminotransf 62.1 12 0.0003 17.5 5.2 93 35-128 78-186 (531)
234 PRK06721 threonine synthase; R 60.7 13 0.00032 17.4 4.1 35 282-316 285-319 (352)
235 PRK05446 imidazole glycerol-ph 60.3 13 0.00032 17.4 3.6 27 57-86 72-98 (354)
236 pfam06406 StbA StbA protein. T 60.3 7.8 0.0002 18.7 2.6 29 50-78 72-100 (318)
237 pfam00862 Sucrose_synth Sucros 59.6 7 0.00018 19.0 2.2 37 229-268 389-426 (550)
238 TIGR02823 oxido_YhdH putative 59.5 6.5 0.00017 19.2 2.1 152 160-322 65-259 (330)
239 COG0533 QRI7 Metal-dependent p 58.9 7.4 0.00019 18.9 2.3 34 56-91 54-87 (342)
240 PRK06352 threonine synthase; V 58.8 14 0.00035 17.2 4.2 50 267-316 263-319 (351)
241 TIGR00080 pimt protein-L-isoas 56.5 7.5 0.00019 18.8 1.9 50 89-145 66-118 (228)
242 pfam00012 HSP70 Hsp70 protein. 56.3 15 0.00038 16.9 6.6 51 221-271 302-355 (598)
243 COG3894 Uncharacterized metal- 54.3 16 0.00041 16.7 8.1 65 226-291 475-540 (614)
244 TIGR00289 TIGR00289 conserved 53.4 8.7 0.00022 18.4 1.9 28 74-102 90-117 (227)
245 COG2518 Pcm Protein-L-isoaspar 51.9 11 0.00029 17.7 2.2 32 87-119 56-88 (209)
246 COG1448 TyrB Aspartate/tyrosin 51.7 15 0.00037 17.0 2.8 33 241-280 334-366 (396)
247 COG2073 CbiG Cobalamin biosynt 51.6 18 0.00045 16.4 7.0 86 225-319 209-296 (298)
248 pfam01968 Hydantoinase_A Hydan 51.5 18 0.00045 16.4 4.5 51 218-268 210-260 (285)
249 PTZ00145 phosphoribosylpyropho 51.5 18 0.00045 16.4 3.5 82 61-144 194-294 (443)
250 PTZ00340 O-sialoglycoprotein e 51.0 18 0.00046 16.4 4.1 33 57-91 61-93 (348)
251 TIGR03285 methan_mark_14 putat 50.7 16 0.0004 16.8 2.8 33 49-81 62-94 (445)
252 cd06449 ACCD Aminocyclopropane 50.5 18 0.00047 16.3 7.0 32 282-313 276-307 (307)
253 TIGR01991 HscA Fe-S protein as 50.1 13 0.00034 17.2 2.4 106 56-169 322-448 (628)
254 TIGR01921 DAP-DH diaminopimela 50.0 19 0.00048 16.3 4.6 117 1-141 1-122 (326)
255 PRK02628 nadE NAD synthetase; 48.2 17 0.00044 16.5 2.7 53 232-284 383-446 (678)
256 KOG2509 consensus 48.0 20 0.00051 16.1 5.6 21 283-303 402-422 (455)
257 PRK12338 hypothetical protein; 47.9 20 0.00051 16.1 5.3 43 229-271 221-273 (320)
258 TIGR02810 agaZ_gatZ D-tagatose 47.0 6.1 0.00016 19.4 0.3 60 38-103 115-198 (430)
259 COG2377 Predicted molecular ch 45.8 17 0.00045 16.5 2.4 60 52-112 71-143 (371)
260 cd01714 ETF_beta The electron 45.7 22 0.00056 15.9 3.1 28 118-145 92-120 (202)
261 PRK03359 putative electron tra 45.3 22 0.00056 15.8 3.2 12 133-144 112-123 (256)
262 COG0241 HisB Histidinol phosph 44.7 23 0.00058 15.8 3.5 54 225-279 70-132 (181)
263 TIGR02350 prok_dnaK chaperone 44.4 23 0.00058 15.7 4.4 72 222-304 303-377 (598)
264 pfam02887 PK_C Pyruvate kinase 44.2 23 0.00059 15.7 3.3 25 287-311 77-101 (117)
265 PRK13609 diacylglycerol glucos 43.5 14 0.00036 17.0 1.7 80 60-142 158-240 (388)
266 PRK00950 histidinol-phosphate 43.4 24 0.0006 15.6 5.1 28 4-33 9-36 (369)
267 KOG1015 consensus 43.4 17 0.00042 16.6 2.0 91 39-141 641-737 (1567)
268 PRK11921 metallo-beta-lactamas 42.5 24 0.00062 15.5 7.3 19 69-87 65-83 (395)
269 KOG2708 consensus 42.3 17 0.00044 16.5 2.0 91 57-160 54-151 (336)
270 PRK05452 anaerobic nitric oxid 40.8 26 0.00066 15.4 7.6 20 68-87 66-85 (479)
271 TIGR01485 SPP_plant-cyano sucr 39.0 28 0.0007 15.2 3.1 53 221-274 131-194 (257)
272 cd04333 ProX_deacylase This CD 39.0 26 0.00068 15.3 2.5 10 60-69 4-13 (148)
273 pfam12244 DUF3606 Protein of u 38.9 28 0.00071 15.2 2.8 42 240-283 7-48 (57)
274 PRK12342 putative electron tra 38.7 28 0.00071 15.2 3.1 11 133-143 109-119 (254)
275 PRK03910 D-cysteine desulfhydr 38.4 28 0.00072 15.1 5.5 32 282-313 287-318 (331)
276 TIGR00014 arsC arsenate reduct 38.0 29 0.00073 15.1 3.1 44 230-274 14-58 (114)
277 TIGR01341 aconitase_1 aconitat 37.7 29 0.00074 15.1 5.1 70 15-87 39-120 (896)
278 COG4977 Transcriptional regula 37.2 28 0.00072 15.1 2.4 12 106-117 76-87 (328)
279 pfam01411 tRNA-synt_2c tRNA sy 37.0 30 0.00076 15.0 3.3 21 60-80 102-123 (545)
280 pfam11294 DUF3095 Protein of u 36.7 8.7 0.00022 18.4 -0.3 16 119-134 146-161 (373)
281 TIGR02684 dnstrm_HI1420 probab 36.5 26 0.00065 15.4 2.1 64 225-288 15-78 (91)
282 cd01781 AF6_RA_repeat2 The AF- 35.6 19 0.00048 16.3 1.3 30 225-254 26-55 (100)
283 TIGR02249 integrase_gron integ 35.4 26 0.00067 15.4 2.0 63 226-288 246-317 (320)
284 PRK11706 TDP-4-oxo-6-deoxy-D-g 34.8 22 0.00056 15.8 1.6 69 33-115 39-108 (375)
285 PRK03321 putative aminotransfe 34.8 32 0.00082 14.8 5.6 67 5-80 8-81 (352)
286 PRK13929 rod-share determining 34.6 32 0.00081 14.8 2.3 74 220-294 251-330 (335)
287 PRK02947 hypothetical protein; 34.0 17 0.00044 16.5 0.9 15 89-103 93-107 (247)
288 PTZ00122 phosphoglycerate muta 33.7 33 0.00085 14.7 3.8 73 227-315 213-287 (296)
289 PRK13980 NAD synthetase; Provi 33.6 34 0.00086 14.7 3.1 121 36-167 24-159 (264)
290 COG1058 CinA Predicted nucleot 33.1 34 0.00087 14.6 6.5 83 1-102 1-89 (255)
291 KOG4230 consensus 32.9 35 0.00088 14.6 4.5 20 58-78 286-305 (935)
292 TIGR01993 Pyr-5-nucltdase pyri 30.7 28 0.0007 15.2 1.5 21 252-272 161-182 (205)
293 TIGR02365 dha_L_ycgS dihydroxy 30.6 23 0.00058 15.7 1.0 14 279-292 181-196 (200)
294 cd03749 proteasome_alpha_type_ 30.0 39 0.00098 14.3 2.2 30 220-249 179-209 (211)
295 TIGR01265 tyr_nico_aTase tyros 29.8 36 0.00091 14.5 1.9 79 49-137 53-139 (424)
296 PRK06851 hypothetical protein; 29.6 39 0.001 14.2 5.2 55 47-101 39-109 (368)
297 PRK11678 putative chaperone; P 29.5 39 0.001 14.2 2.4 18 291-309 389-406 (450)
298 TIGR00011 YbaK_EbsC ybaK/ebsC 29.3 29 0.00073 15.1 1.4 47 33-83 5-54 (156)
299 TIGR00454 TIGR00454 conserved 29.1 40 0.001 14.2 3.5 65 74-143 44-109 (204)
300 PRK07475 hypothetical protein; 28.8 40 0.001 14.2 2.9 70 51-142 63-133 (243)
301 cd03752 proteasome_alpha_type_ 28.4 41 0.001 14.1 2.2 28 221-248 184-211 (213)
302 pfam02540 NAD_synthase NAD syn 27.9 39 0.00099 14.3 1.9 29 91-120 64-92 (243)
303 COG0245 IspF 2C-methyl-D-eryth 27.5 42 0.0011 14.0 3.1 56 228-283 77-141 (159)
304 COG1214 Inactive homolog of me 27.5 43 0.0011 14.0 4.0 40 43-82 28-67 (220)
305 PRK12390 1-aminocyclopropane-1 27.3 43 0.0011 14.0 5.0 32 282-313 293-324 (337)
306 KOG1359 consensus 26.8 32 0.00081 14.8 1.3 89 56-145 86-205 (417)
307 TIGR00417 speE spermidine synt 26.8 32 0.00082 14.8 1.3 47 225-271 175-222 (284)
308 PRK10222 L-ascorbate-specific 26.7 38 0.00098 14.3 1.7 10 280-289 30-39 (85)
309 TIGR00329 gcp metalloendopepti 26.1 45 0.0011 13.8 2.2 41 59-101 60-102 (337)
310 pfam02685 Glucokinase Glucokin 25.7 46 0.0012 13.8 3.4 48 58-105 40-96 (316)
311 pfam01890 CbiG_C Cobalamin syn 25.5 46 0.0012 13.8 4.0 43 226-268 16-60 (121)
312 COG0443 DnaK Molecular chapero 25.4 46 0.0012 13.8 3.9 49 223-271 288-339 (579)
313 pfam09887 DUF2114 Uncharacteri 25.4 46 0.0012 13.8 3.0 33 49-81 64-97 (448)
314 TIGR02133 RPI_actino ribose 5- 25.3 47 0.0012 13.7 2.7 58 44-107 37-94 (154)
315 PRK00292 glk glucokinase; Prov 24.9 47 0.0012 13.7 3.4 44 59-105 43-95 (315)
316 PRK00084 ispF 2-C-methyl-D-ery 24.9 47 0.0012 13.7 2.6 56 227-282 78-142 (159)
317 TIGR02177 PorB_KorB 2-oxoacid: 24.8 48 0.0012 13.7 2.9 86 220-306 158-248 (302)
318 pfam01902 ATP_bind_4 ATP-bindi 24.7 48 0.0012 13.7 2.3 68 58-141 75-143 (219)
319 TIGR01693 UTase_glnD protein-P 23.7 50 0.0013 13.6 2.1 52 49-100 511-572 (903)
320 TIGR01393 lepA GTP-binding pro 23.4 47 0.0012 13.7 1.6 110 6-128 235-358 (598)
321 COG2971 Predicted N-acetylgluc 23.3 51 0.0013 13.5 2.2 109 50-169 45-159 (301)
322 PRK05449 aspartate alpha-decar 23.2 17 0.00042 16.6 -0.8 16 131-146 40-55 (126)
323 pfam07700 HNOB Heme NO binding 23.2 51 0.0013 13.5 3.9 44 57-102 19-62 (171)
324 TIGR03588 PseC UDP-4-keto-6-de 23.1 49 0.0013 13.6 1.7 68 34-115 38-106 (380)
325 COG0426 FpaA Uncharacterized f 22.8 41 0.001 14.1 1.2 43 49-101 53-95 (388)
326 PRK07027 cobalamin biosynthesi 22.8 52 0.0013 13.4 3.6 42 227-268 19-62 (126)
327 TIGR01120 rpiB ribose 5-phosph 22.8 36 0.00091 14.5 0.9 11 89-99 42-52 (143)
328 COG5499 Predicted transcriptio 22.7 52 0.0013 13.4 2.9 46 227-272 61-118 (120)
329 PRK01584 alanyl-tRNA synthetas 22.7 52 0.0013 13.4 2.9 10 65-74 143-152 (593)
330 COG0825 AccA Acetyl-CoA carbox 22.7 36 0.00091 14.5 0.9 69 95-168 181-250 (317)
331 PRK09483 response regulator; P 22.5 53 0.0013 13.4 2.8 94 54-168 11-104 (216)
332 TIGR02802 Pal_lipo peptidoglyc 22.5 53 0.0013 13.4 2.8 69 25-94 17-94 (104)
333 cd06221 sulfite_reductase_like 22.4 53 0.0014 13.4 2.0 55 233-287 179-239 (253)
334 TIGR01264 tyr_amTase_E tyrosin 22.2 53 0.0014 13.4 1.8 84 49-137 47-132 (415)
335 PRK02731 histidinol-phosphate 22.1 54 0.0014 13.4 5.5 24 4-29 8-31 (367)
336 TIGR01428 HAD_type_II haloacid 22.0 54 0.0014 13.3 2.9 44 228-274 126-179 (207)
337 PRK12615 galactose-6-phosphate 22.0 48 0.0012 13.7 1.4 29 51-83 41-69 (171)
338 PRK13520 L-tyrosine decarboxyl 21.9 54 0.0014 13.3 3.9 66 53-125 37-102 (375)
339 PRK11658 UDP-4-amino-4-deoxy-L 21.9 51 0.0013 13.5 1.5 59 34-106 42-100 (379)
340 pfam02261 Asp_decarbox Asparta 21.7 19 0.00049 16.2 -0.7 16 131-146 40-55 (116)
341 PRK05472 redox-sensing transcr 21.5 55 0.0014 13.3 3.7 18 126-143 78-95 (211)
342 TIGR02638 lactal_redase lactal 21.5 18 0.00046 16.4 -0.9 53 39-101 28-81 (380)
343 TIGR01136 cysKM cysteine synth 21.3 56 0.0014 13.3 2.2 82 55-142 45-146 (315)
344 TIGR03286 methan_mark_15 putat 21.3 56 0.0014 13.3 2.0 14 71-84 70-83 (404)
345 cd01994 Alpha_ANH_like_IV This 21.2 56 0.0014 13.2 2.3 58 73-141 88-146 (194)
346 TIGR00761 argB acetylglutamate 21.1 56 0.0014 13.2 2.5 21 22-42 47-67 (254)
347 PRK13505 formate--tetrahydrofo 20.8 57 0.0015 13.2 3.2 11 307-317 513-523 (556)
348 TIGR02698 CopY_TcrY copper tra 20.7 50 0.0013 13.6 1.3 37 212-248 73-110 (130)
349 PRK04152 consensus 20.6 58 0.0015 13.2 5.5 28 5-34 6-33 (364)
350 pfam09663 Amido_AtzD_TrzD Amid 20.5 58 0.0015 13.1 2.5 74 52-135 130-208 (365)
351 PRK11493 sseA 3-mercaptopyruva 20.5 50 0.0013 13.6 1.2 57 58-123 73-129 (281)
352 PRK04761 ppnK inorganic polyph 20.4 58 0.0015 13.1 2.7 59 54-118 5-64 (246)
353 KOG3157 consensus 20.4 55 0.0014 13.3 1.5 31 257-292 191-221 (244)
354 PRK10729 nudF ADP-ribose pyrop 20.3 58 0.0015 13.1 3.8 18 230-247 101-118 (202)
No 1
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III; InterPro: IPR004655 Beta-ketoacyl-acyl carrier protein synthase III (FabH), in general, initiates elongation in type II fatty acid synthase systems found in bacteria and plants. It is responsible for producing the multitude of fatty acid structures found in bacterial membranes . The two members of this subfamily from Bacillus subtilis differ from each other, and from FabH from Escherichia coli, in acyl group specificity. Active site residues include Cys112, His244 and Asn274 of Escherichia coli FabH. Cys-112 is the site of acyl group attachment. ; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process.
Probab=100.00 E-value=0 Score=619.96 Aligned_cols=319 Identities=48% Similarity=0.801 Sum_probs=306.4
Q ss_pred CEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf 22699999996498411788999880999878110247518898289889999999999999974021235443366501
Q gi|254780497|r 2 IRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVAT 81 (324)
Q Consensus 2 ~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s 81 (324)
|+++|.|+|.|+|+++++|+||+++.++++|||..||||++||++.++|.+++|+.+||++||++|+++++|||+||++|
T Consensus 1 ~~~~i~g~G~YlP~~v~tNadL~k~vDTSDEWI~TRTGI~eRRiAad~E~~S~mg~~AA~~Aie~A~i~~~dID~iivaT 80 (329)
T TIGR00747 1 MKAKILGTGSYLPEKVLTNADLEKMVDTSDEWIVTRTGIKERRIAADDETSSHMGFEAAKKAIENAGISKDDIDLIIVAT 80 (329)
T ss_pred CEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEC
T ss_conf 93578986030775135733345321068331123686100021472012689999999999985278866878679805
Q ss_pred CCCCC-CCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 22334-58985310011220268644442101220034678889989641556531676302243222456632323454
Q gi|254780497|r 82 STPDQ-TFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGD 160 (324)
Q Consensus 82 ~~~~~-~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGD 160 (324)
.+||+ .+||.|++|+..||++++++||++.+|+||+++|.+|.+||++|.++++|||++|+.|+.+||+||++++||||
T Consensus 81 ~~pd~l~fPS~Ac~~~~~LGi~~~~aFD~~AACaGF~Y~Ls~A~~~i~SG~y~~vLvvGaeklSs~~D~~DR~TcvLFGD 160 (329)
T TIGR00747 81 TTPDYLAFPSAACMVQAYLGIKNIPAFDLSAACAGFIYGLSVAKQYIESGKYKTVLVVGAEKLSSTLDWTDRGTCVLFGD 160 (329)
T ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEECC
T ss_conf 78000037785899997618667632223656766899999999986157702688998511055367466875799606
Q ss_pred CCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCC--------CCCCCCHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 431234402654465434454101232035555561775487654--------443320010320244455777777788
Q gi|254780497|r 161 GAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPST--------SRTVGCIRMEGKAVFKYAVEKAVELIE 232 (324)
Q Consensus 161 GAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~g~~~~~~~~~~~~~~i~ 232 (324)
||+|+||++.+..+. .+|+++++++||++.+.++.+..... .....++.|+|+++|+++++.|.+.++
T Consensus 161 GAgA~v~g~s~~~~~----~eI~~~~l~AdG~~~~~L~l~~~~~~~P~~~~~~~~~~~f~~M~G~evFk~Av~~m~~~~~ 236 (329)
T TIGR00747 161 GAGAVVVGESEDDGG----LEIISTNLGADGTQGELLYLPAGGRRCPFSKNTLQGSSPFITMEGNEVFKHAVRKMLKVVE 236 (329)
T ss_pred CCEEEEEECCCCCCC----CEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 722688704578776----3012346530564432132067776688777734466661787373258899999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH-HCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEE
Q ss_conf 8898740010001210244444158999999719787673365865-193301269999999998068899989999997
Q gi|254780497|r 233 KVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDI-HGNTSAASIPLALAVAVKEGRVKKGDCLLLEAM 311 (324)
Q Consensus 233 ~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~-~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~ 311 (324)
++|++++++++|||||||||+|.+++++++|+|++++|+++.|+++ ||||++||||++|++++++|++|+||.+||.+|
T Consensus 237 ~~l~~a~l~~~DiD~lvPHQAN~RIi~a~ak~L~~~~~~Vv~Tv~khyGNTSAASiP~AL~E~~~~G~iK~Gd~~LL~AF 316 (329)
T TIGR00747 237 ETLEAAGLSKEDIDWLVPHQANIRIIEALAKRLELKESKVVKTVHKHYGNTSAASIPIALDELLETGRIKKGDLLLLVAF 316 (329)
T ss_pred HHHHHHCCCHHHCCEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEE
T ss_conf 99997187830461555541116899999997089803168632001346304346678999874177772448887630
Q ss_pred CCCCCEEEEEEEC
Q ss_conf 1450145687869
Q gi|254780497|r 312 GGGFTSGTVLLRW 324 (324)
Q Consensus 312 G~G~s~~a~llrw 324 (324)
|+|+|||++++||
T Consensus 317 GGGLtWGa~~vr~ 329 (329)
T TIGR00747 317 GGGLTWGAALVRF 329 (329)
T ss_pred CHHHHHHHHHHCC
T ss_conf 6035667775259
No 2
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=0 Score=567.20 Aligned_cols=317 Identities=56% Similarity=0.901 Sum_probs=303.1
Q ss_pred CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf 92269999999649841178899988099987811024751889828988999999999999997402123544336650
Q gi|254780497|r 1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVA 80 (324)
Q Consensus 1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~ 80 (324)
||+++|+|+|.|+|+++|+|+|++++++.+++||.+++||++|||++++|+++|||++|+++||+++|++|+|||+||++
T Consensus 1 m~~a~I~g~g~ylP~~~v~n~el~~~~~~~~~~i~~~tGI~~R~~a~~~e~~~~ma~~Aa~~aL~~ag~~~~dIdlli~~ 80 (319)
T PRK09352 1 MMYAKILGTGSYLPERVVTNDDLEKMVDTSDEWIVTRTGIKERRIAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIVA 80 (319)
T ss_pred CCCCEEEEEEEECCCCEECHHHHHHHCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEE
T ss_conf 96338989999789965869999987199889997564945899889999999999999999999759898899799997
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 12233458985310011220268644442101220034678889989641556531676302243222456632323454
Q gi|254780497|r 81 TSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGD 160 (324)
Q Consensus 81 s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGD 160 (324)
|++||+.+|++|++||++||++++++|||+++|+|++.||++|..++++|.++++|||++|.+|+.+||+|+.++++|||
T Consensus 81 t~t~d~~~P~~a~~v~~~LGl~~~~~fDi~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGD 160 (319)
T PRK09352 81 TTTPDYLFPSTACLVQARLGAKNAPAFDLSAACSGFVYALSTADQFIRSGAYKNALVIGAEKLSRIVDWTDRSTCVLFGD 160 (319)
T ss_pred ECCCCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHCCCCCCCCCCHHEEEECC
T ss_conf 41789989669999999978999737537434568999999999998669876269961101014245555000166158
Q ss_pred CCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCC--CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 43123440265446543445410123203555556177548765444--3320010320244455777777788889874
Q gi|254780497|r 161 GAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSR--TVGCIRMEGKAVFKYAVEKAVELIEKVFDST 238 (324)
Q Consensus 161 GAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~ 238 (324)
||+|+||++.+.. ++++.++++|+.+.+.++.+.++...+ ...+++|+|+++|+++++.+++.++++|+++
T Consensus 161 GAaA~vl~~~~~~-------~~~~~~~~tdg~~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~a~~~~~~~i~~~L~~~ 233 (319)
T PRK09352 161 GAGAVVLEASEEP-------GILSTHLGSDGSGGDLLYLPGGGSRGPASGETYLRMEGREVFKFAVREMAKVAREALEAA 233 (319)
T ss_pred CCCEEEEEECCCC-------CEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 5007999754888-------736899997488887589678888898787754676449999999985499999999874
Q ss_pred HCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEE
Q ss_conf 00100012102444441589999997197876733658651933012699999999980688999899999971450145
Q gi|254780497|r 239 HLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFTSG 318 (324)
Q Consensus 239 gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~ 318 (324)
|++++|||||++||+|+++++.++++||+|+||++.++++||||+|+|+|++|++++++|++++||+|+|++||+|++|+
T Consensus 234 gl~~~dId~~i~Hq~~~~~~~~~~~~lgi~~ek~~~~l~~~GNt~sasipi~L~~~~~~g~lk~Gd~vll~~~G~G~s~~ 313 (319)
T PRK09352 234 GLTPEDIDWLVPHQANLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWG 313 (319)
T ss_pred CCCHHHCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHEEE
T ss_conf 99832387899826768999999998197988856548753845887899999999983999997999999984474317
Q ss_pred EEEEEC
Q ss_conf 687869
Q gi|254780497|r 319 TVLLRW 324 (324)
Q Consensus 319 a~llrw 324 (324)
++++||
T Consensus 314 ~~vlrw 319 (319)
T PRK09352 314 AALVRW 319 (319)
T ss_pred EEEEEC
T ss_conf 889979
No 3
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=0 Score=566.56 Aligned_cols=318 Identities=58% Similarity=0.921 Sum_probs=305.6
Q ss_pred CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf 92269999999649841178899988099987811024751889828988999999999999997402123544336650
Q gi|254780497|r 1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVA 80 (324)
Q Consensus 1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~ 80 (324)
||+++|.|+|.|+|+++++|++++++.++++|||..++||++||++.++|+.++|+++|+++||+++|++|+|||+||++
T Consensus 1 ~~~a~i~g~G~~lP~~~vtn~d~e~~~~tsdewI~~rtGir~R~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~a 80 (323)
T COG0332 1 MMNAKILGIGSYLPERVVTNADLEKRVDTSDEWIETRTGIRERRIAADDETTSDLAVEAARKALEDAGISPDDIDLIIVA 80 (323)
T ss_pred CCCCEEEEEEEECCCCCCCHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEE
T ss_conf 98526998885268765577889853688711055303771123169995477899999999999869998999889996
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 12233458985310011220268644442101220034678889989641556531676302243222456632323454
Q gi|254780497|r 81 TSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGD 160 (324)
Q Consensus 81 s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGD 160 (324)
|++||+++|++|++||++||++++.+||++.+|+||++||++|..+|++|.++++|||++|.+|+++||+||.++++|||
T Consensus 81 T~tpd~~~Ps~A~~vq~~LG~~~~~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVgae~~S~~ld~~dR~t~vlFgD 160 (323)
T COG0332 81 TSTPDHLFPSTACLVQARLGLGGAPAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRILDWTDRDTCVLFGD 160 (323)
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCHHHCCCEEEECC
T ss_conf 67866668817999999858998666660535599999999999999758977799981058404588766561289737
Q ss_pred CCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCC---CC-CCCHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 4312344026544654344541012320355555617754876544---43-3200103202444557777777888898
Q gi|254780497|r 161 GAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTS---RT-VGCIRMEGKAVFKYAVEKAVELIEKVFD 236 (324)
Q Consensus 161 GAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~g~~~~~~~~~~~~~~i~~~L~ 236 (324)
||+|+||++.+ .+.+++.+.+.+|+++.+..+.++..... .. ...+.|+|+++|+++++.+++.++++|+
T Consensus 161 GAgAvvl~~~~------~~~~i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~ 234 (323)
T COG0332 161 GAGAVVLEATE------DDNGILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPKAIEEVLE 234 (323)
T ss_pred CCEEEEEECCC------CCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHH
T ss_conf 73599983578------776623423323566787442267777666444565323544588999999999999999999
Q ss_pred HHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf 74001000121024444415899999971978767336586519330126999999999806889998999999714501
Q gi|254780497|r 237 STHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFT 316 (324)
Q Consensus 237 ~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s 316 (324)
+++++++|||||+|||+|.++++.++++|++|+||++.++++||||++||+|++|++++++|++++||+++|++||+|++
T Consensus 235 ~~~l~~~dId~~vpHQan~ri~~~i~~~l~~~~~k~~~~~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~vll~~fG~Glt 314 (323)
T COG0332 235 KAGLTPEDIDWFVPHQANLRIIEAIAKKLGIPEEKVVVTVDKYGNTSAASIPLALDEALREGRIKPGDLVLLEAFGGGLT 314 (323)
T ss_pred HCCCCHHHCCEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCE
T ss_conf 84999889988720645499999999982998899756898755463230899999874508989998999993037532
Q ss_pred EEEEEEEC
Q ss_conf 45687869
Q gi|254780497|r 317 SGTVLLRW 324 (324)
Q Consensus 317 ~~a~llrw 324 (324)
||++++||
T Consensus 315 wg~~~~r~ 322 (323)
T COG0332 315 WGAALVRW 322 (323)
T ss_pred EEEEEEEE
T ss_conf 13699982
No 4
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=0 Score=550.75 Aligned_cols=317 Identities=32% Similarity=0.453 Sum_probs=278.6
Q ss_pred CEEEEEEEEEECCCCEECHHHHHH------------------------HHCCCHHHHHHCCCCCEEEEECC---------
Q ss_conf 226999999964984117889998------------------------80999878110247518898289---------
Q gi|254780497|r 2 IRSTVRGIGLSLPRRVLSNSDLES------------------------IVDTSDGWIKRRVGISRRHIAGK--------- 48 (324)
Q Consensus 2 ~~~~I~~~g~ylP~~~v~~~el~~------------------------~~~~~~~~i~~~~GI~~R~~~~~--------- 48 (324)
+|++|.|+|+|+|+++|+|+||.+ ..+.++|||.++|||++||++++
T Consensus 1 ~n~~I~g~G~y~P~~vvtN~dl~~~~~~~~~~~~~~~~~~~~~~~~e~~vdtsdeWI~~rtGI~~R~i~~~~g~~~~~~~ 80 (372)
T PRK07515 1 HNVVISGTGLYTPPESISNEELVESFNAYVDQFNAENAAAIEAGEVEALPPSSSEFIEKASGIKSRYVMEKEGILDPERM 80 (372)
T ss_pred CCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCHHC
T ss_conf 96199997887799510489999877655544200003332134310255675677664246467775235676660001
Q ss_pred ---------CC--CHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHH
Q ss_conf ---------88--9999999999999974021235443366501223345898531001122026864444210122003
Q gi|254780497|r 49 ---------DE--TTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFV 117 (324)
Q Consensus 49 ---------~e--~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~ 117 (324)
+| ..+|||++|+++||+++|++|+|||+||++|++||+.+|++|++||++||++ +.+|||+.+|+||+
T Consensus 81 ~p~~~~~~~d~~~~~sdma~~AA~~AL~~Agi~~~dIDlIIvaT~tpd~~~PstA~~vq~~LG~~-~~afDi~aaCsGfv 159 (372)
T PRK07515 81 RPRIPERSNDELSIQAEMGVAAARQALERAGKTAADIDGVIVACSNMQRAYPAMAIEIQEALGIE-GFAFDMNVACSSAT 159 (372)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCHHHHHHHHHCCC-CEEHHHHCCCHHHH
T ss_conf 43333456643113799999999999998499989999999976888888972999999984898-42043614086899
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCE
Q ss_conf 46788899896415565316763022432224566323234544312344026544654344541012320355555617
Q gi|254780497|r 118 YAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKL 197 (324)
Q Consensus 118 ~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (324)
+||.+|.+||++|.++++|||++|.+|+++||+||.++++|||||+|+||++.+.... ...+++++++..++.. +..
T Consensus 160 yaL~~A~~~I~sg~~k~vLVVgaE~~S~~~d~~DR~t~~LFGDGAgAvvle~~~~~~~-~~~~~il~~~~~t~~s--~~i 236 (372)
T PRK07515 160 FGIQTAANAIRSGSARRVLVVNPEICSGHLNFRDRDSHFIFGDVATAVIVERADTATS-AGGFEILSTRLFTQFS--NNI 236 (372)
T ss_pred HHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCCCEEEECCCCEEEEEEECCCCCC-CCCCEEEECCCCCCCC--CCC
T ss_conf 9999999999718987479953423033627678770477616530246641146888-7774156656346656--664
Q ss_pred EECC-------CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHC---CC
Q ss_conf 7548-------7654443320010320244455777777788889874001000121024444415899999971---97
Q gi|254780497|r 198 YVDG-------GPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKM---KI 267 (324)
Q Consensus 198 ~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~l---gl 267 (324)
..++ .........+++|+|+++|+++++.+++.++++|+++|++++|||+|++||+|.++++.++++| ++
T Consensus 237 ~~~~g~~~~~~~~~~~~~~~~~~m~G~~Vfk~av~~~~~~i~~~L~~~gl~~~DId~~v~HQAN~rii~~i~k~llg~~~ 316 (372)
T PRK07515 237 RNNFGFLNRAEPEGAGDADKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTPADVKRLWLHQANINMNQLIGKKVLGRDA 316 (372)
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHHHHHHHHCCCCC
T ss_conf 45788667677678876331114417899999999999999999998298988899998677899999999998545899
Q ss_pred CHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEEEC
Q ss_conf 876733658651933012699999999980688999899999971450145687869
Q gi|254780497|r 268 PFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFTSGTVLLRW 324 (324)
Q Consensus 268 ~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~a~llrw 324 (324)
+++|++.++++||||+|||+|++|++. .+++++||+++|++||+|++||++++||
T Consensus 317 ~~~k~~~~i~~yGNTssASiplaL~~~--~~~ik~Gd~vll~gfGaGltwGa~llr~ 371 (372)
T PRK07515 317 TPEEAPVILDEYANTSSAGSIIAFHKH--SDDLAAGDLGVICSFGAGYSIGSVIVRK 371 (372)
T ss_pred CHHHHEEHHHHCCCHHHHHHHHHHHHH--HCCCCCCCEEEEEEEEHHHHHHHHHEEC
T ss_conf 988832207411847888999999998--4867899989999987798568743362
No 5
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=0 Score=542.68 Aligned_cols=318 Identities=45% Similarity=0.768 Sum_probs=299.7
Q ss_pred CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf 92269999999649841178899988099987811024751889828988999999999999997402123544336650
Q gi|254780497|r 1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVA 80 (324)
Q Consensus 1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~ 80 (324)
|.+++|+|+|+|+|+++|+|+|++++++.+++||.+++||++||+++++|+++|||++|+++||+++|++|+|||+||++
T Consensus 2 ~~~~~I~g~g~ylP~~~v~n~~~~~~~~~~~~~i~~~~Gi~~R~~a~~~e~~~dma~~Aa~~aL~~ag~~~~dIdllI~~ 81 (326)
T PRK12879 2 MSYARITGWGKYVPPRVLTNDDLATFIDTSDEWIVQRTGIKERRIAHVNEFTSDLAIKAAERALARAGLDASDIDLIIVA 81 (326)
T ss_pred CCCCEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEE
T ss_conf 97778999999889965859999988099888998644964899889999999999999999999759798899699995
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 12233458985310011220268644442101220034678889989641556531676302243222456632323454
Q gi|254780497|r 81 TSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGD 160 (324)
Q Consensus 81 s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGD 160 (324)
|++||+..|++|++|+++||++++.+|||+++|+|++.||++|.+++++|+.+++|||++|.+|+.+|+.++.++++|||
T Consensus 82 t~~~d~~~P~~a~~v~~~LGl~~~~~fdi~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~e~~s~~~d~~~~~~~~lfGD 161 (326)
T PRK12879 82 TTTPDYLFPSTASQVQARLGIPNAAAFDINAACSGFLYGLELANGLITSGSYKKVLVIGAERLSKYTDWTDRTTAILFGD 161 (326)
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHCCCCCCCCCHHHHHCCCC
T ss_conf 26789827759999999868499514540122037999999999998668755036502022135324354333210178
Q ss_pred CCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCC------CCCCCCHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf 431234402654465434454101232035555561775487654------44332001032024445577777778888
Q gi|254780497|r 161 GAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPST------SRTVGCIRMEGKAVFKYAVEKAVELIEKV 234 (324)
Q Consensus 161 GAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~~i~~~ 234 (324)
||+|+||++++.. .++++.++.++++..+.+..++.+.. ......+.++|+++|+++.+.+++.++++
T Consensus 162 GAaA~ll~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~ 235 (326)
T PRK12879 162 GAGAVVVEATEEP------PGLIDYVLGTDGDGGDILYRTGLGTTMDRFDLDNGGFYFQFNGREVFKWAVRGMPKAAKQV 235 (326)
T ss_pred CCEEEEEEECCCC------CCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHH
T ss_conf 6338998724888------8347899985377766588347887688755335675078642999999987569999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC
Q ss_conf 98740010001210244444158999999719787673365865193301269999999998068899989999997145
Q gi|254780497|r 235 FDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGG 314 (324)
Q Consensus 235 L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G 314 (324)
|+++|++++|||+|++||+|+++++.++++||+|+||++.++++|||++|+|+|++|++++++++++|||+|++++||+|
T Consensus 236 L~~~gl~~~did~~i~Hq~~~~~~~~i~~~Lgl~~~k~~~~l~~~GN~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G 315 (326)
T PRK12879 236 LEKAGLTKDDIDWVIPHQANLRIIESLCEKLGIPLEKTLVNVEYYGNTSAATIPLALCLALEQGKIKPGDTLLLYGFGAG 315 (326)
T ss_pred HHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHH
T ss_conf 99859997788989986887899999999809798885656732274377789999999997399999699999999167
Q ss_pred CCEEEEEEEC
Q ss_conf 0145687869
Q gi|254780497|r 315 FTSGTVLLRW 324 (324)
Q Consensus 315 ~s~~a~llrw 324 (324)
++|+++++||
T Consensus 316 ~s~~~~~~rw 325 (326)
T PRK12879 316 LTWAALLVKW 325 (326)
T ss_pred HHHEEEEEEE
T ss_conf 3224899997
No 6
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=0 Score=543.56 Aligned_cols=317 Identities=30% Similarity=0.532 Sum_probs=290.7
Q ss_pred CC-EEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 92-26999999964984117889998809998781102475188982898899999999999999740212354433665
Q gi|254780497|r 1 MI-RSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIV 79 (324)
Q Consensus 1 M~-~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~ 79 (324)
|. +|+|+|+|+|+|+++|+|+|++++++.+++||.++|||++|||+ ++|+++|||++|+++||++++++|+|||+||+
T Consensus 1 m~~~v~I~g~g~ylP~~~v~n~el~~~~~~~~~~i~~~tGI~~R~~a-~~e~~sdma~~Aa~~aL~~agi~~~dIdliI~ 79 (329)
T PRK07204 1 MKRYISIKGIGTYLPKRKVDSLEIDKMLDVPEGWTLKKAGVKTRYFV-DGETSSYMGAEAAKKAVEDAKLTWDDIDCIIC 79 (329)
T ss_pred CCCCEEEEEEEEECCCCEECHHHHHHHCCCCHHHHHHCCCCEEEEEC-CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEE
T ss_conf 99854999999966997285999998809987999762386168557-99985999999999999975989888849999
Q ss_pred ECCCCCCCCCCCCCCHHHHHHCCCC--CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 0122334589853100112202686--44442101220034678889989641556531676302243222456632323
Q gi|254780497|r 80 ATSTPDQTFPSTAVNIQNRLGMKRG--FAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVL 157 (324)
Q Consensus 80 ~s~~~~~~~p~~a~~i~~~LGl~~~--~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~l 157 (324)
+|++||+++|++|++||++||++++ .+|||+++|+|+++||++|..+|++|+++++|||++|.+|+.+||.++.++++
T Consensus 80 ~s~t~d~~~P~~A~~v~~~LGl~~~~~~afDi~~aC~g~~~al~~A~~~i~~g~~~~~Lvv~~e~~S~~~d~~~~~~~~l 159 (329)
T PRK07204 80 GSGTIQQAIPSTASLIQEQLGLQHSGIPCFDINSTCLSFITALDTISYAIECGRYKNVVIISSEISSVGLNWGQNESSIL 159 (329)
T ss_pred ECCCCCCCCCCHHHHHHHHHCCCCCCCEEEEHHHHCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCE
T ss_conf 25789988980999999996478888355003011448999999999998669865258960334554436444331201
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCC---------CCCCCCCHHHCCHHHHHHHHHHHH
Q ss_conf 45443123440265446543445410123203555556177548765---------444332001032024445577777
Q gi|254780497|r 158 FGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPS---------TSRTVGCIRMEGKAVFKYAVEKAV 228 (324)
Q Consensus 158 fGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~g~~~~~~~~~~~~ 228 (324)
|||||+|+||++.+.. .+++.+++.+++.....+..++++. .......++|+|+.+|+++.+.++
T Consensus 160 fGDGA~A~vl~~~~~~------~~il~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~ 233 (329)
T PRK07204 160 FGDGAAAVVITKGDHS------SSIIASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLM 233 (329)
T ss_pred ECCCCEEEEEECCCCC------CCEEEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHH
T ss_conf 1465148999505888------8447799765479704411136985478632333346673176057999999986269
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 77888898740010001210244444158999999719787673365865193301269999999998068899989999
Q gi|254780497|r 229 ELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLL 308 (324)
Q Consensus 229 ~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll 308 (324)
+.++++|+++|++++|||+|++||+|+++++.+.++||+|+||++.++++||||+|+|+|++|+++++++++++||+|++
T Consensus 234 ~~i~~~L~~~gl~~~DId~~i~HQ~n~~~~~~i~~~lgip~ek~~~~~~~~GNt~sasipi~L~~~~~~g~i~~Gd~vll 313 (329)
T PRK07204 234 KFIDKLLMDTGYSLADIDLIVPHQASGPAMRLIRKKLGVDEERFMTIFEDYGNMISASIPVALFEAIKQKKVQRGNKILL 313 (329)
T ss_pred HHHHHHHHHCCCCHHHCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf 99999998719997889989981488899999999809697762103631180898889999999998499999699999
Q ss_pred EEECCCCCEEEEEEEC
Q ss_conf 9971450145687869
Q gi|254780497|r 309 EAMGGGFTSGTVLLRW 324 (324)
Q Consensus 309 ~~~G~G~s~~a~llrw 324 (324)
++||+|++||++++||
T Consensus 314 ~~~GaG~s~ga~l~~~ 329 (329)
T PRK07204 314 LGTSAGLSIGGILLEY 329 (329)
T ss_pred EEEEHHHHHHHEEEEC
T ss_conf 9988674150203769
No 7
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=0 Score=538.56 Aligned_cols=315 Identities=42% Similarity=0.767 Sum_probs=291.9
Q ss_pred EEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
Q ss_conf 69999999649841178899988099987811024751889828988999999999999997402123544336650122
Q gi|254780497|r 4 STVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATST 83 (324)
Q Consensus 4 ~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~ 83 (324)
|+|+|+|+|||+++|+|+||+++++.+++||.++|||++||+++++|+++|||++|+++||+++|++|+|||+||++|++
T Consensus 1 v~I~g~g~ylP~~~v~n~e~~~~~~~~~~~i~~~tGI~~R~~~~~~e~~sdma~~Aa~~aL~~ag~~~~dIDllI~~t~t 80 (327)
T CHL00203 1 VHILSTGSSVPNFSIENQQFSQIVETSDEWISTRTGIKKRRLAGSSTSLTKLAAEAANKALHKAGWSAKDIDLIILATST 80 (327)
T ss_pred CEEEEEEEECCCCEECHHHHHHHCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCC
T ss_conf 97999999789917849999987299868885457940797789999999999999999997549997898889995004
Q ss_pred CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 33458985310011220268644442101220034678889989641556531676302243222456632323454431
Q gi|254780497|r 84 PDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGDGAG 163 (324)
Q Consensus 84 ~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGDGAa 163 (324)
|+++. ++|++|+++||++++.+|||+++|+||++||++|..+|++|.++++|||++|.+|+.+|++++.++++|||||+
T Consensus 81 pd~~~-~~a~~v~~~LG~~~~~afDv~~aC~g~~~al~~A~~~i~sg~~~~~LvV~~E~~S~~~~~~~~~~~~~fGDgA~ 159 (327)
T CHL00203 81 PDDLF-GSASQLQAEIGATQAVAFDITAACSGFIFALVTAGQFIQSGSYRNILIIGADTLSRWIDWSDRRTCILFGDGAG 159 (327)
T ss_pred CCCCC-CHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHCCCCCE
T ss_conf 67678-76999999858998637655200447999999999998569845147851432357656464545311378524
Q ss_pred EEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCC----------CCCCCCHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 234402654465434454101232035555561775487654----------4433200103202444557777777888
Q gi|254780497|r 164 ALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPST----------SRTVGCIRMEGKAVFKYAVEKAVELIEK 233 (324)
Q Consensus 164 A~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~g~~~~~~~~~~~~~~i~~ 233 (324)
|++|++.+... .++++..+.+++.+++.+.....+.. ......++|+|+++|+++++.+++.+++
T Consensus 160 A~il~~~~~~~-----~~~l~~~~~tdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~ 234 (327)
T CHL00203 160 AVAIGECPTEE-----NSILGFKLCTDGSLNSHLQLMNKPDNMQLFNQTKYPMGGFNSISMNGKEVYKFAVFQVPAVIQE 234 (327)
T ss_pred EEEEEECCCCC-----CCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHH
T ss_conf 89874046777-----8447899986677776178724787766567665667885427875599999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECC
Q ss_conf 89874001000121024444415899999971978767336586519330126999999999806889998999999714
Q gi|254780497|r 234 VFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGG 313 (324)
Q Consensus 234 ~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~ 313 (324)
+|+++|++++|||+|++||+|+++++.++++|++|+||++.++++||||+|+|+|++|+++++++++++||+|+|++||+
T Consensus 235 ~l~~~g~~~~did~~v~HQ~~~~~~~~i~~~lgl~~~k~~~~~~~~GNt~sasip~~L~~~~~~g~l~~Gd~vll~g~G~ 314 (327)
T CHL00203 235 CLNALNISIDEVDWLLLHQANQRILEAVADRLSIPHSKMITNLEHYGNTSAASIPLALDEAIKDNKIQPGQIIVLSGFGA 314 (327)
T ss_pred HHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEH
T ss_conf 99876998111887998868899999999981979788665476449668889999999999849999989999999855
Q ss_pred CCCEEEEEEEC
Q ss_conf 50145687869
Q gi|254780497|r 314 GFTSGTVLLRW 324 (324)
Q Consensus 314 G~s~~a~llrw 324 (324)
|++|+++++||
T Consensus 315 G~s~g~~~~~w 325 (327)
T CHL00203 315 GLTWGAIVLKW 325 (327)
T ss_pred HHHHEEEEEEE
T ss_conf 72026899997
No 8
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=0 Score=535.12 Aligned_cols=317 Identities=36% Similarity=0.592 Sum_probs=295.4
Q ss_pred CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf 92269999999649841178899988099987811024751889828988999999999999997402123544336650
Q gi|254780497|r 1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVA 80 (324)
Q Consensus 1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~ 80 (324)
|-+++|.|+|.|||+++|+|+|++++++.+++||+++|||++||++.++|+++|||++|+++||++++++|+|||+||++
T Consensus 2 ~~~~rI~g~G~ylP~~~v~n~el~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~ma~~Aa~~aL~~agi~~~dIdllI~~ 81 (327)
T PRK05963 2 VCSSRIAGFGHAVPDRRVENAEIEAQLGLETGWIERRTGIRCRRWAMPDETLSHLAASAADMALADAGIERSDIALTLLA 81 (327)
T ss_pred CCCCEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEE
T ss_conf 54677999999679937839999988299979977536933799889999999999999999999759898998799998
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 12233458985310011220268644442101220034678889989641556531676302243222456632323454
Q gi|254780497|r 81 TSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGD 160 (324)
Q Consensus 81 s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGD 160 (324)
|++||+++|++|++||++||++++.+|||+++|+||+.||++|..+++++. +++|||++|.+|+.+|+.|+.++++|||
T Consensus 82 t~t~d~~~P~~A~~v~~~LGl~~~~~fDi~~aC~g~~~al~~A~~~i~~~~-~~vLvv~~e~~S~~~~~~d~~~~~lfgD 160 (327)
T PRK05963 82 TSTPDHLLPPTAPLLAHWLGLQNSGAADLAGACTGFLYALVLADGFVRAQG-KPVLVVAANILSRRINMAERASAVLFAD 160 (327)
T ss_pred EECCCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCC-CEEEEEEEHHHCCCCCCHHHHHHHHCCC
T ss_conf 607999897099999998577861143597668999999999999997348-6379964102103588012334323047
Q ss_pred CCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCC--------CCCCHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 43123440265446543445410123203555556177548765444--------3320010320244455777777788
Q gi|254780497|r 161 GAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSR--------TVGCIRMEGKAVFKYAVEKAVELIE 232 (324)
Q Consensus 161 GAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~~~~~~~~i~ 232 (324)
||+|+||++.+... .+++...+.+|+.+++.+.++.++...+ ......++|+.+|+..++.+++.++
T Consensus 161 gA~A~vl~~~~~~~-----~g~l~~~~~td~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~ 235 (327)
T PRK05963 161 AAGAVVLAPSAKAN-----SGVLGSQLISDGSHYDLIQIPAGGSARPYAPERDASEFLMTMQDGRAVFTEAVRMMTGASQ 235 (327)
T ss_pred CCCEEEEECCCCCC-----CCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHH
T ss_conf 00068984157888-----7446689864378766388557986788887666665524751749999999985299999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC
Q ss_conf 88987400100012102444441589999997197876733658651933012699999999980688999899999971
Q gi|254780497|r 233 KVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMG 312 (324)
Q Consensus 233 ~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G 312 (324)
++|+++|++++|||+|++||+|+++++.+.++||+|+||++.++++||||+|+|+|++|+++++++++++||+|+|++||
T Consensus 236 ~~L~~~gl~~~dId~~v~HQ~n~~~~~~v~~~lgl~~ek~~~~~~~~GNt~sAsipiaL~~a~~~g~l~~Gd~vll~g~G 315 (327)
T PRK05963 236 NVLASAAMLPQDIDRFFPHQANARIVDKVCETLGIPRAKAASTIETYGNSSAATIPLSLSLANLEQPLREGERLLFAAAG 315 (327)
T ss_pred HHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEE
T ss_conf 99998499822288899867998999999998297978703027513924888999999999982999997999999986
Q ss_pred CCCCEEEEEEE
Q ss_conf 45014568786
Q gi|254780497|r 313 GGFTSGTVLLR 323 (324)
Q Consensus 313 ~G~s~~a~llr 323 (324)
+||+||++++|
T Consensus 316 ~G~s~g~~~~~ 326 (327)
T PRK05963 316 AGMTGGAVVMQ 326 (327)
T ss_pred HHHHHHHHEEE
T ss_conf 68635451265
No 9
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=0 Score=530.60 Aligned_cols=311 Identities=27% Similarity=0.462 Sum_probs=280.0
Q ss_pred CCEEEEEEEEEECCCCEECHHHHHHHHCCCHH----HHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCE
Q ss_conf 92269999999649841178899988099987----81102475188982898899999999999999740212354433
Q gi|254780497|r 1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDG----WIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDL 76 (324)
Q Consensus 1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~----~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ 76 (324)
|.|++|.|+|.|+|+++|+|+|+.+....+++ |+.+++||++||+++++|+++|||++|+++||++++++|+|||+
T Consensus 5 ~~~akI~G~g~~vP~~~v~n~d~~~~~~~~d~~~~~~~~~~tGI~~R~~a~~~~~~sdla~~AA~~AL~~a~i~~~dID~ 84 (353)
T PRK12880 5 FDKAKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKKVIGLNTRYICDENTCVSDLGKHAANTLLQGLNIDKNSLDA 84 (353)
T ss_pred CCCCEEEEEEEECCCCEECCHHHHHHHCCCCHHHHEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCE
T ss_conf 04408999999779976414798876538746776334245584547787999869999999999999975999889999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 66501223345898531001122026-86444421012200346788899896415565316763022432224566323
Q gi|254780497|r 77 IIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTC 155 (324)
Q Consensus 77 ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~ 155 (324)
||++|++|||.+|++|+.||++||++ ++.+|||+.+|+||++||.+|..||++|. +++|||++|.+|+.+||+||.++
T Consensus 85 II~aT~tpD~~~PstA~~vq~~LGl~~~~~AfDI~~aCsGfvyaL~~A~~~I~sg~-~kvLlV~~e~~S~~id~~dr~t~ 163 (353)
T PRK12880 85 LIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGL-GKILLICGDTLSKFIHPKNMNLA 163 (353)
T ss_pred EEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEECHHHCCCCCHHHCCEE
T ss_conf 99973788908884789999980999885088745443469999999999998198-74899922675367782205510
Q ss_pred CCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCC-----------------CCCCHHHCCHH
Q ss_conf 2345443123440265446543445410123203555556177548765444-----------------33200103202
Q gi|254780497|r 156 VLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSR-----------------TVGCIRMEGKA 218 (324)
Q Consensus 156 ~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~g~~ 218 (324)
++|||||+|+||++.+... .+ ..+.+|+++++.+.++.++...+ ....++|+|++
T Consensus 164 ~LFGDgAgA~vl~~~~~~~------~~--~~l~sdG~~~d~l~i~~gg~~~p~~~~~~~~~~~~~~~~~~~~~l~MdG~~ 235 (353)
T PRK12880 164 PIFGDGVSATLIEKTDFNE------AF--FELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGAN 235 (353)
T ss_pred EEECCCCEEEEEECCCCCC------CE--EEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHH
T ss_conf 3205774368873046786------42--898048888773784688655877555577532244334555533436589
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH-HHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf 44455777777788889874001000121024444415899999971978767336-58651933012699999999980
Q gi|254780497|r 219 VFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIV-TVDIHGNTSAASIPLALAVAVKE 297 (324)
Q Consensus 219 ~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~-~~~~~Gn~~sas~~~~L~~~~~~ 297 (324)
+|+++++.+++.++++|+++|++++|||+|+|||+|.++++.++++||+|+||++. ++++||||+|||+|++|+++.+.
T Consensus 236 Vf~~av~~vp~~i~~~L~~agl~~~DId~~v~HQAN~riie~i~k~Lgl~~ek~~~~~~~~yGNTssASIPiaL~e~~~~ 315 (353)
T PRK12880 236 IFNMALECEPKSFKEILEFSKVDEKDIAFHLFHQSNAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLCELDTP 315 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
T ss_conf 99999999999999999983999788656865468899999999980989787030055533958999999999999874
Q ss_pred CCCCCCCEEEEEEECCCCCEEEEEEEC
Q ss_conf 688999899999971450145687869
Q gi|254780497|r 298 GRVKKGDCLLLEAMGGGFTSGTVLLRW 324 (324)
Q Consensus 298 g~l~~Gd~vll~~~G~G~s~~a~llrw 324 (324)
+++ +++|++||+|++||++++||
T Consensus 316 ~~~----k~~L~gFGaGltwg~~ll~~ 338 (353)
T PRK12880 316 KEF----KASLSAFGAGLSWGSAVLNF 338 (353)
T ss_pred CCC----EEEEEEEEHHHHHEEEEEEE
T ss_conf 998----44699983574123888998
No 10
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=0 Score=523.23 Aligned_cols=314 Identities=52% Similarity=0.821 Sum_probs=297.2
Q ss_pred EEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf 26999999964984117889998809998781102475188982898899999999999999740212354433665012
Q gi|254780497|r 3 RSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATS 82 (324)
Q Consensus 3 ~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~ 82 (324)
+++|.|+|+|+|+++|+|+|++++++.++++|++++||++||+++++|+++|||++|+++||++++++|+|||+||++|+
T Consensus 1 ~~~I~~~g~y~P~~~v~n~~~~~~~g~~~~~i~~~~Gi~~R~~a~~~e~~~~ma~~Aa~~aL~~ag~~~~dIdlli~~s~ 80 (320)
T cd00830 1 NARILGIGSYLPERVVTNDELEKRLDTSDEWIRTRTGIRERRIADPGETTSDLAVEAAKKALEDAGIDADDIDLIIVATS 80 (320)
T ss_pred CCEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
T ss_conf 97899999977993784999998869898999870297489988999999999999999999866989567888999415
Q ss_pred CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 23345898531001122026864444210122003467888998964155653167630224322245663232345443
Q gi|254780497|r 83 TPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGDGA 162 (324)
Q Consensus 83 ~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGDGA 162 (324)
+||+..|++|++|+++||++++.+|||+++|+|++.||++|..++++|+.+++|||++|.+|+.+|+.++.++++|||||
T Consensus 81 ~~~~~~P~~a~~v~~~LGl~~~~~fdi~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~e~~s~~~~~~~~~~~~lfGDga 160 (320)
T cd00830 81 TPDYLFPATACLVQARLGAKNAAAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRILDWTDRSTAVLFGDGA 160 (320)
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHCCCCCCCCCCHHHCCCCCC
T ss_conf 68986883999999996889972251045511589999999999855987616998413422554546621111037863
Q ss_pred CEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCC------CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 1234402654465434454101232035555561775487654------4433200103202444557777777888898
Q gi|254780497|r 163 GALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPST------SRTVGCIRMEGKAVFKYAVEKAVELIEKVFD 236 (324)
Q Consensus 163 aA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~ 236 (324)
+|+||++.+.. .+++.+++.+++++++.+..+.+... ......++++++++++++.+.+++.++++|+
T Consensus 161 aA~ll~~~~~~------~~i~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~ 234 (320)
T cd00830 161 GAVVLEATEED------PGILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALE 234 (320)
T ss_pred EEEEEEECCCC------CCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHH
T ss_conf 48999624888------842468999706886526845897667764333567617973289999887656999999999
Q ss_pred HHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf 74001000121024444415899999971978767336586519330126999999999806889998999999714501
Q gi|254780497|r 237 STHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFT 316 (324)
Q Consensus 237 ~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s 316 (324)
++|++++|||+|++||+|+++++.++++||+|+||++.++++|||++|+|+|++|++++++++++|||+|+|++||+|++
T Consensus 235 ~~g~~~~did~~v~Hq~~~~~~~~~~~~lgi~~~k~~~~~~~~GN~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s 314 (320)
T cd00830 235 KAGLTPDDIDWFVPHQANLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLT 314 (320)
T ss_pred HCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHH
T ss_conf 85999101657997068789999999980969899675685107558768999999999749999859999999804532
Q ss_pred EEEEEE
Q ss_conf 456878
Q gi|254780497|r 317 SGTVLL 322 (324)
Q Consensus 317 ~~a~ll 322 (324)
|+++++
T Consensus 315 ~g~~~l 320 (320)
T cd00830 315 WGAALL 320 (320)
T ss_pred HHHHHC
T ss_conf 532029
No 11
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=0 Score=524.79 Aligned_cols=315 Identities=24% Similarity=0.357 Sum_probs=278.6
Q ss_pred EEEEEEEEECCCCEECHHHHHHHH-------CCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCE
Q ss_conf 699999996498411788999880-------9998781102475188982898899999999999999740212354433
Q gi|254780497|r 4 STVRGIGLSLPRRVLSNSDLESIV-------DTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDL 76 (324)
Q Consensus 4 ~~I~~~g~ylP~~~v~~~el~~~~-------~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ 76 (324)
|+|+|+|+|||+++|+|+|+++++ +.+.+||+++|||++||+++++|+++|||++|+++||+++|++|+|||+
T Consensus 1 v~I~~~g~ylP~~~vtn~el~~~~~~~~~~~~~~~~~i~~~tGI~~Rr~a~~~e~~sdma~~Aa~~AL~~agi~p~dIDl 80 (339)
T PRK09258 1 VFINSLAYELAPVVVTSSEIESRLAPLYQRLRIPMGQLEALTGIRERRWWPKGHQLSDGATEAARKALAEAGIDASDIGL 80 (339)
T ss_pred CEEEEEEEECCCCCCCHHHHHHHHCCCHHHHCCCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCE
T ss_conf 98989998779961748999977533045425871132334673035367999988999999999999975999899999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC-----
Q ss_conf 66501223345898531001122026-864444210122003467888998964155653167630224322245-----
Q gi|254780497|r 77 IIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWS----- 150 (324)
Q Consensus 77 ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~----- 150 (324)
||++|++|||++|++|++||++||++ ++.+|||+.+|+||++||++|.++|++|.++++|||++|..|+.+|+.
T Consensus 81 lI~at~tpd~~~P~tA~~v~~~LGl~~~~~afDi~~aCsGf~~aL~~A~~~i~sg~~~~~LvV~aE~~s~~~d~~~~~~~ 160 (339)
T PRK09258 81 LINTSVCRDQLEPATACRVHAELGLSKDCAIFDISNACLGFLNGMLDAANMIELGQIDYGLVVSGESARDIVEATIARML 160 (339)
T ss_pred EEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCC
T ss_conf 99905114853781899999984799874786510431679999999999997699988999975412100244432102
Q ss_pred -----------CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHH
Q ss_conf -----------663232345443123440265446543445410123203555556177548765444332001032024
Q gi|254780497|r 151 -----------DRSTCVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAV 219 (324)
Q Consensus 151 -----------d~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 219 (324)
+....++|||||+|++|++.+..... ..+......+++.+.+.+... ........+++|++.+
T Consensus 161 ~~~~~~~~~f~~~~a~~~~GdGA~A~vl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~dg~~~ 234 (339)
T PRK09258 161 ADPTMTRQNFAQSLATLTLGSGAVAVVLTRGSLVPRA---HRLLGGVTRAATEHHQLCQGG---LDEAGHGLMRTDAVLL 234 (339)
T ss_pred CCCCCHHHHCCCCCCCEECCCCEEEEEEECCCCCCCC---CEEECCCCCCCCCHHHCCCCC---CCCCCCCCEEECHHHH
T ss_conf 4666203330221110421662179999536778888---645145545772100102478---8878765565358999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
Q ss_conf 44557777777888898740010001210244444158999999719787673365865193301269999999998068
Q gi|254780497|r 220 FKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEGR 299 (324)
Q Consensus 220 ~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~ 299 (324)
|++.++.+++.++++|+++|++++|||+|++||+|.++++.+.++||+|+||++.++++||||+|||+|++|++++++|+
T Consensus 235 ~~~~~~~~~~~~~~~L~~~gl~~~dId~~v~HQan~~~~~~i~~~Lgi~~ek~~~~~~~~GNT~sASiPlaL~~a~~~g~ 314 (339)
T PRK09258 235 LKEGVELAVDTWEAFLQQLGWSVEQVDKVVCHQVGAAHTRAVLKALGIDPEKVFPTFPLLGNMGPVSLPITLAMAAEQGF 314 (339)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCHHHHHCHHHHHCCHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999839998998899862576999999999819687771031864586898999999999998299
Q ss_pred CCCCCEEEEEEECCCCCEEEEEEEC
Q ss_conf 8999899999971450145687869
Q gi|254780497|r 300 VKKGDCLLLEAMGGGFTSGTVLLRW 324 (324)
Q Consensus 300 l~~Gd~vll~~~G~G~s~~a~llrw 324 (324)
+++||+|+|++||+|++|+++++||
T Consensus 315 ik~Gd~vll~~~GaGl~~~~~~~~w 339 (339)
T PRK09258 315 LKKGDRVALLGIGSGLNCSMLGIKW 339 (339)
T ss_pred CCCCCEEEEEEEEHHHHHHHHEEEC
T ss_conf 9997999999884787655673769
No 12
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=0 Score=519.55 Aligned_cols=316 Identities=22% Similarity=0.409 Sum_probs=285.5
Q ss_pred CEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEE-E
Q ss_conf 226999999964984117889998809998781102475188982898899999999999999740212354433665-0
Q gi|254780497|r 2 IRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIV-A 80 (324)
Q Consensus 2 ~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~-~ 80 (324)
||++|.|+|.|+|+++|+|+|+++++++++|||.++|||++||+++++|+++|||++|+++||+++|++|+|||+||+ +
T Consensus 3 ~~v~I~~~G~ylP~~~v~n~e~~~~~~~~~e~i~~rtGI~~Rr~a~~~e~~~dma~~Aa~~aL~~ag~~~~dIdliI~~~ 82 (337)
T PRK06840 3 MNVGIVSTGVYLPKDVMTAEEIAKKTGIPEEVIIEKFGILEKPIPGPEDHTSDMAIAAAKPALKQAGIDPEAIDLVIYIG 82 (337)
T ss_pred CCEEEEEEEEECCCCEECHHHHHHHCCCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEE
T ss_conf 51099999997899736699999873998799854658616857899998999999999999997498967887899993
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-CCCCCEEEEECCCCCCCCCCCCCCCCCC-
Q ss_conf 12233458985310011220268644442101220034678889989641-5565316763022432224566323234-
Q gi|254780497|r 81 TSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSG-VVRRVMVIGSDTFSRIVDWSDRSTCVLF- 158 (324)
Q Consensus 81 s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g-~~~~~Lvv~~e~~S~~~d~~d~~~~~lf- 158 (324)
|.++|++.|++|++||++||++++.+|||+++|+||++||++|.+++.++ .++++|||++|..|+.+||+++.++++|
T Consensus 83 t~~~d~~~ps~A~~vq~~LG~~~a~afDi~~aC~gf~~aL~~A~~~l~a~~~~~~vLvv~~e~~s~~i~~~~~~~~~~f~ 162 (337)
T PRK06840 83 EEHKDYPVWTAAPKIQHEIGAKNAWAFDIMARCGTFPVALKVAKDLMLADPNINNVLLVGGYRNSDLVDYDNPRSRFMFN 162 (337)
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEE
T ss_conf 68989788419999999858999607871332017999999999998716553147860143246555668988516997
Q ss_pred -CCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCC--------CCCCHHHCCHHH-----HHHHH
Q ss_conf -5443123440265446543445410123203555556177548765444--------332001032024-----44557
Q gi|254780497|r 159 -GDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSR--------TVGCIRMEGKAV-----FKYAV 224 (324)
Q Consensus 159 -GDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~g~~~-----~~~~~ 224 (324)
||||+|++|++.+.. .+++++.+.+|+++++.+..+.++...+ ....+++.+.+. .....
T Consensus 163 ~GDga~A~ll~~~~~~------~~il~~~~~tdg~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 236 (337)
T PRK06840 163 LGAGGSAALLKKNYGK------NRVLGSAIITDGSFSEDVRVPAGGTKQPASYETVDNRQHYLDVLDPESMKERLDPVSI 236 (337)
T ss_pred ECCCCEEEEEECCCCC------CCEEEEEECCCCCCHHCEEEECCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHH
T ss_conf 0588347998416888------7057666212575312168713875688874453454215863103888877688999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 77777788889874001000121024444415899999971978767336586519330126999999999806889998
Q gi|254780497|r 225 EKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKKGD 304 (324)
Q Consensus 225 ~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd 304 (324)
+.+.++++++|+++|++++|||+|++||+|+++++.+.++||+|+||+. ++++||||+++|+|++|++++++|++++||
T Consensus 237 ~~~~~~i~~~L~~~gl~~~DId~~~~hq~~~~~~~~~~~~lgi~~~k~~-~~~~~GNt~sasiplaL~~a~~~g~l~~Gd 315 (337)
T PRK06840 237 PNFYKVIREALRKSGYTPKDIDYLAILHMKRSAHIAVLEGLGLTEEQTI-YLEEYGHMGQIDQILSLHLALEQGKLKDGD 315 (337)
T ss_pred HHHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHHCCCHHHEE-ECCCCCCHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 8899999999998499957868888853379999999998299754348-602677317778999999999809999959
Q ss_pred EEEEEEECCCCCEEEEEEEC
Q ss_conf 99999971450145687869
Q gi|254780497|r 305 CLLLEAMGGGFTSGTVLLRW 324 (324)
Q Consensus 305 ~vll~~~G~G~s~~a~llrw 324 (324)
+|+|++||+|++||++++||
T Consensus 316 ~vll~g~G~G~s~g~~v~~w 335 (337)
T PRK06840 316 LVVLVSAGTGYTWAATVIRW 335 (337)
T ss_pred EEEEEEEEHHHHHEEEEEEE
T ss_conf 99999999452125899997
No 13
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=0 Score=516.79 Aligned_cols=320 Identities=25% Similarity=0.343 Sum_probs=272.0
Q ss_pred CEEEEEEEEEECCCCEECHHHHHHHH-------CCCHHHHHHCCCCCEEEEE-----CCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 22699999996498411788999880-------9998781102475188982-----89889999999999999974021
Q gi|254780497|r 2 IRSTVRGIGLSLPRRVLSNSDLESIV-------DTSDGWIKRRVGISRRHIA-----GKDETTASLGEAAARDALHHAEM 69 (324)
Q Consensus 2 ~~~~I~~~g~ylP~~~v~~~el~~~~-------~~~~~~i~~~~GI~~R~~~-----~~~e~~~~la~~Aa~~al~~a~~ 69 (324)
|||+|.|+|.|||+++|+|+||++++ +++++||.++|||++|||+ .+.|+.+|||++|+++||+++|+
T Consensus 1 m~v~I~g~G~ylP~~vvtN~el~~~~~~~~~~~~~~~~~I~~rtGI~~Rr~a~~~~~~~~et~sdma~~Aa~~AL~~Agi 80 (378)
T PRK06816 1 MNVYITSTGAFLPGEPVDNDEMEAYLGLINGRPSRLRRIILRNNGIKTRHYAIDPTGETTHSNAQMAAHAIRDLLDDAGF 80 (378)
T ss_pred CCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 96399999997899825589999986415788774888977545821378740788887667899999999999997599
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
Q ss_conf 23544336650122334589853100112202686444421012200346788899896415565316763022432224
Q gi|254780497|r 70 SVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDW 149 (324)
Q Consensus 70 ~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~ 149 (324)
+|+|||+||++|++||++.|++|+.||++||++++.+||++++|+||++||++|..+|++|.++++|||++|..|+.+++
T Consensus 81 ~~~dIDliI~aT~tpd~~~P~tA~~Vq~~LGl~~~~~fDi~~aCsgf~~aL~~A~~~I~sG~~k~vLVV~aE~~S~~l~~ 160 (378)
T PRK06816 81 GLEDVELLACGTSQGDQLMPGHAVMVHGELGNPPCEVVSFHGVCAAGMMALKYAYLSVKAGESSNAVATASELASRLFRA 160 (378)
T ss_pred CHHHCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHCC
T ss_conf 98999999996686898785489999998189985403211012378999999999997489887999934401121034
Q ss_pred C------------CCCCCC---------CCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCC-----
Q ss_conf 5------------663232---------34544312344026544654344541012320355555617754876-----
Q gi|254780497|r 150 S------------DRSTCV---------LFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGP----- 203 (324)
Q Consensus 150 ~------------d~~~~~---------lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 203 (324)
+ |+.++. +|||||+|+||++.+........ +...++.+++..++.+...++.
T Consensus 161 ~~~~~~~~~~~~~d~~~~~~f~~~fl~~lfGDGAgA~vl~~~~~~~g~~~~--i~~~~~~s~~~~~~~~~~~G~~~~~~~ 238 (378)
T PRK06816 161 SRYEAEEERVEELEEGPEIAFEKDFLRWMLSDGAGAVLLENKPRPGGLSLR--IDWIDLFSFADEFPVCMYAGADKNEDG 238 (378)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEE--EEEECCCCCCCCCCCCEECCCCCCCCC
T ss_conf 322321122220124410033200135555666636997643888874345--431014554555663021476667787
Q ss_pred ------------CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHC-----C
Q ss_conf ------------54443320010320244455777777788889874001000121024444415899999971-----9
Q gi|254780497|r 204 ------------STSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKM-----K 266 (324)
Q Consensus 204 ------------~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~l-----g 266 (324)
........++|+++.+++.+...+++.++++|+++|++++|||+|+|||+|.++++.+.+.| +
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~L~~~gl~~~dId~~vpHQAn~ri~~~v~~~l~~~g~~ 318 (378)
T PRK06816 239 ELKGWSDYSPAEAEAAGALALKQDVRLLNEVIVVWGVDPYLELVDKRRLDPDAIDHFLPHYSSEYFREKIVELLAKAGLM 318 (378)
T ss_pred CCCCCCCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEECCCCHHHHHHHHHHHHHHCCCC
T ss_conf 65774447877775335401112589999999999999999999984999899888812610599999999998753589
Q ss_pred CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC-CCEEEEEEE
Q ss_conf 787673365865193301269999999998068899989999997145-014568786
Q gi|254780497|r 267 IPFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGG-FTSGTVLLR 323 (324)
Q Consensus 267 l~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G-~s~~a~llr 323 (324)
+|+||++.++++||||+|||+|++|++++++|++++||+|+|+++|+| |+||+++++
T Consensus 319 ip~ek~~~~v~~~GNT~sASiPiaL~~a~~~g~ik~Gd~vll~~~~sg~~~~g~~ll~ 376 (378)
T PRK06816 319 IPEEKWFTNLATVGNTGSASIFIMLDELFRSGRLKPGQTILCFVPESGRFSAAFMLLT 376 (378)
T ss_pred CCHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHEEEEEE
T ss_conf 9866616014232707999999999999984999999999999624767615469999
No 14
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=0 Score=453.41 Aligned_cols=305 Identities=23% Similarity=0.303 Sum_probs=251.5
Q ss_pred CEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf 22699999996498411788999880999878110247518898289889999999999999974021235443366501
Q gi|254780497|r 2 IRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVAT 81 (324)
Q Consensus 2 ~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s 81 (324)
|+++|.|+|.|+|+++|+|+||++.++.+++||.++|||++||+++++|++++||++|+++||++++++|++||+||++|
T Consensus 1 M~vgI~g~G~YlP~~~v~n~el~~~~~~~~ewI~~rtGI~~R~va~~dE~t~~lA~~AA~~aL~~agi~~~dIdlIi~aT 80 (346)
T PRK04262 1 MMVGIVGYGAYIPRYRIKVEEIARVWGDDPEAIKKGLGVEEKSVPGPDEDTATIAVEAARNALKRAGIDPKEIGAVYVGS 80 (346)
T ss_pred CCCEEEEEEEECCCEEECHHHHHHHHCCCHHHHEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEE
T ss_conf 92179899995899688499999885999647313668507877899999999999999999987599977889899964
Q ss_pred CCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 223345898531001122026-8644442101220034678889989641556531676302243222456632323454
Q gi|254780497|r 82 STPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGD 160 (324)
Q Consensus 82 ~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGD 160 (324)
+|||+..|++|+.||++||++ ++.+||++.+|+||++||.+|.+||++|.++++|||++|..+. ++.+.. -+..||
T Consensus 81 ~Tpd~~~pstA~~vq~~LGl~~~~~afDi~aaCsGf~~aL~~A~~~I~sg~~~~~LVV~aD~~~~--~~~~~~-e~~~Ga 157 (346)
T PRK04262 81 ESHPYAVKPTATIVAEALGATPDLTAADLEFACKAGTAALQAAMGLVKSGMIKYALAIGADTAQG--APGDAL-EYTAAA 157 (346)
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC--CCCCEE-EECCCC
T ss_conf 78886676506899998389988059861022114999999999999739997699983133347--874056-666888
Q ss_pred CCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 43123440265446543445410123203555556177548765444332001032024445577777778888987400
Q gi|254780497|r 161 GAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHL 240 (324)
Q Consensus 161 GAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl 240 (324)
||+|++++.++...... .....+. ...+.++.++.+ .... ..++.+.. .+.+.+++.++++|+++|+
T Consensus 158 Ga~A~~~g~~~~~~~~~------~~~~~~~-~~~d~~r~~~~~-~~~~--~~~~~~~~---~~~~~~~~~~~~~l~~~g~ 224 (346)
T PRK04262 158 GGAAFIIGAEEVIAEIE------ATYSYVT-DTPDFWRREGEP-YPRH--GERFTGEP---AYFKHIISAAKGLMEKLGT 224 (346)
T ss_pred CEEEEEECCCCCCEEEC------CCCCCCC-CCCCCCCCCCCC-CCCC--CCCEECCE---EHHHHHHHHHHHHHHHCCC
T ss_conf 76999987799733745------6334457-874220569982-4230--77162523---2799999999999998299
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH--HHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEE
Q ss_conf 100012102444441589999997197876733658--651933012699999999980688999899999971450145
Q gi|254780497|r 241 TIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTV--DIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFTSG 318 (324)
Q Consensus 241 ~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~--~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~ 318 (324)
+++|||||+|||+|.++++.+.++||+|+||++.++ ++||||++||+|++|.++++++ ++||+|+|++||+|....
T Consensus 225 ~~~did~~v~HQAn~rii~~~~k~Lgi~~ekv~~nl~~~~~GNTssASiplaL~~~l~~~--k~Gd~Ill~~fG~G~~~~ 302 (346)
T PRK04262 225 KPSDYDYAVFHQPNGKFPLRAAKMLGFTKEQVKPGLLTPYIGNTYSASALLGLAAVLDVA--KPGDRILVVSFGSGAGSD 302 (346)
T ss_pred CHHHCCEEECCCCCHHHHHHHHHHCCCCHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHCC--CCCCEEEEEEECCCCCEE
T ss_conf 978858895167657899999998299989922342177647750336999999998438--998999999856973136
Q ss_pred EEEEEC
Q ss_conf 687869
Q gi|254780497|r 319 TVLLRW 324 (324)
Q Consensus 319 a~llrw 324 (324)
+..+|+
T Consensus 303 ~~~~~v 308 (346)
T PRK04262 303 AFSITV 308 (346)
T ss_pred EEEEEE
T ss_conf 899998
No 15
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=0 Score=434.39 Aligned_cols=312 Identities=33% Similarity=0.445 Sum_probs=265.7
Q ss_pred EEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf 26999999964984117889998809998781102475188982898899999999999999740212354433665012
Q gi|254780497|r 3 RSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATS 82 (324)
Q Consensus 3 ~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~ 82 (324)
+|+|.|+|+|+|+++|+|+|+++.++.+ ++++++||++||+++++|++.||+++|+++||++++++|+|||+||++|+
T Consensus 1 ~v~I~~~g~y~P~~~v~~~~~~~~~~~~--~~~~~~Gi~~r~~a~~~e~~~~ma~~Aa~~aL~~a~~~~~~Idlli~~s~ 78 (324)
T cd00827 1 DVGIEAIGAYLPRYRVDNEELAEGLGVD--PGKYTTGIGQRHMAGDDEDVPTMAVEAARRALERAGIDPDDIGLLIVATE 78 (324)
T ss_pred CCCEEEEEEECCCCEECHHHHHHHHCCH--HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECC
T ss_conf 9368799997899479599999884952--76502470389967999999999999999999984989889979999325
Q ss_pred CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 23345898531001122026864444210122003467888998964155653167630224322245663232345443
Q gi|254780497|r 83 TPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGDGA 162 (324)
Q Consensus 83 ~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGDGA 162 (324)
+|++..|++|++|+++||++++.+||++++|+|++.||++|.+++++|+.+++|||++|.+|+..++.++ ..++|||||
T Consensus 79 ~~~~~~p~~a~~i~~~Lgl~~~~~~di~~~C~g~~~aL~~A~~~l~~g~~~~~LVv~~e~~s~~~~~~~~-~~~~~GDgA 157 (324)
T cd00827 79 SPIDKGKSAATYLAELLGLTNAEAFDLKQACYGGTAALQLAANLVESGPWRYALVVASDIASYLLDEGSA-LEPTLGDGA 157 (324)
T ss_pred CCCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHCCCCCCCCC-CCCCCCCCC
T ss_conf 7786797499999998589997188601422047999999998875487651478740110124677987-664457722
Q ss_pred CEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCC-----C--CCCHHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 123440265446543445410123203555556177548765444-----3--320010320244455777777788889
Q gi|254780497|r 163 GALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSR-----T--VGCIRMEGKAVFKYAVEKAVELIEKVF 235 (324)
Q Consensus 163 aA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~g~~~~~~~~~~~~~~i~~~L 235 (324)
+|+||++.+... ..++...+..+++.+........+..... . .....+.++.+++...+.+.+.++++|
T Consensus 158 aA~ll~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 233 (324)
T cd00827 158 AAMLVSRNPGIL----AAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKAL 233 (324)
T ss_pred EEEEEECCCCCC----CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 899982278655----5540367750156654444456788877754321002222444178999999999999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCH-HHHHHHHHHCCCCHHHH----HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEE
Q ss_conf 87400100012102444441-58999999719787673----36586519330126999999999806889998999999
Q gi|254780497|r 236 DSTHLTIENIDWFVPHQANW-RIINSIVDKMKIPFDKV----IVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEA 310 (324)
Q Consensus 236 ~~~gl~~~did~~~~Hq~~~-~~~~~~~~~lgl~~e~~----~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~ 310 (324)
++.+++ +|+++|++||+|. .+.+.+.++|+++.++. +.++++|||++++|+|++|+++++++++++||+|++++
T Consensus 234 ~~~~~~-~~~~~~~~hq~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sasi~~~L~~~l~~g~l~~Gd~vll~~ 312 (324)
T cd00827 234 DRAGLS-EDIDYFVPHQPNGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFS 312 (324)
T ss_pred HHCCCC-HHHHHEEECCCCHHHHHHHHHHHCCCCHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
T ss_conf 984997-5441243257637899999999839965651351646516841448989999999999729999849999999
Q ss_pred ECCCCCEEEEEE
Q ss_conf 714501456878
Q gi|254780497|r 311 MGGGFTSGTVLL 322 (324)
Q Consensus 311 ~G~G~s~~a~ll 322 (324)
+|+|++|+++++
T Consensus 313 ~G~G~s~~~~vl 324 (324)
T cd00827 313 YGSGFTAEAFVL 324 (324)
T ss_pred ECHHHHHHHECC
T ss_conf 906831551119
No 16
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=0 Score=424.33 Aligned_cols=314 Identities=23% Similarity=0.287 Sum_probs=252.5
Q ss_pred EEEEEEEEEECCCCEECHHHHHHHHCCC------------HHHHHHCCCCCEEEEECCC---------------------
Q ss_conf 2699999996498411788999880999------------8781102475188982898---------------------
Q gi|254780497|r 3 RSTVRGIGLSLPRRVLSNSDLESIVDTS------------DGWIKRRVGISRRHIAGKD--------------------- 49 (324)
Q Consensus 3 ~~~I~~~g~ylP~~~v~~~el~~~~~~~------------~~~i~~~~GI~~R~~~~~~--------------------- 49 (324)
.++|.|+|+|+|+++++|+++.+..... ..||.+++||++||++.++
T Consensus 1 ~A~I~gigt~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tgI~~R~~~~~~~~~~~~~~~~~~~~~~~r~~~ 80 (361)
T cd00831 1 AATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERNDI 80 (361)
T ss_pred CEEEEEEEEECCCEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCCCCCCCHHHHHHH
T ss_conf 91999988777992675999999998744333435678999999972698615555266122024565558887888777
Q ss_pred --CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCC-CCCCCHHHHHHHHHH
Q ss_conf --89999999999999974021235443366501223345898531001122026-86444421-012200346788899
Q gi|254780497|r 50 --ETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQ-AVCSGFVYAVTTADS 125 (324)
Q Consensus 50 --e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~-~~C~~~~~al~~A~~ 125 (324)
|...+|+++|+++||+++|++|+|||+||++|++ ++..|+++++|+++||++ ++..||++ +||+||+.||++|.+
T Consensus 81 ~~~~~~~la~~Aa~~AL~~ag~~~~dId~lI~~Tst-~~~~Ps~a~~v~~~LGl~~~~~~~dl~~~gCsg~~~aL~~A~~ 159 (361)
T cd00831 81 ALEEARELAEEAARGALDEAGLRPSDIDHLVVNTST-GNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKD 159 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCC-CCCCCCHHHHHHHHHCCCCCHHEEECCCCCCHHHHHHHHHHHH
T ss_conf 998999999999999999819898999999998659-9998976999999738998700355646755689999999999
Q ss_pred HHHHCCCCCCEEEEECCCCCCCCCCCCC----CCCCCCCCCCEEEEECCCCCCCCCCC-CCCEEEEEECCCCCCCCEEEC
Q ss_conf 8964155653167630224322245663----23234544312344026544654344-541012320355555617754
Q gi|254780497|r 126 YIRSGVVRRVMVIGSDTFSRIVDWSDRS----TCVLFGDGAGALILEGVEVKGSSMAD-TGILSTYLCSDGSYIDKLYVD 200 (324)
Q Consensus 126 li~~g~~~~~Lvv~~e~~S~~~d~~d~~----~~~lfGDGAaA~ll~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 200 (324)
++++|+.++||||++|.+|++++++|+. +..+|||||+|+||+..+........ ..+.+......+...+.+.+
T Consensus 160 ~i~~g~~~~vLVV~~E~~S~~~~~~d~~~~~v~~~LFGDGA~A~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 238 (361)
T cd00831 160 LLEANPGARVLVVSTELCSLWYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSEDAMGW- 238 (361)
T ss_pred HHHHCCCCEEEEEEEEECCEECCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC-
T ss_conf 9982999769999612112020688757775542000477258998426766656665268837776124688876666-
Q ss_pred CCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH--HCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHH---HH
Q ss_conf 87654443320010320244455777777788889874--00100012102444441589999997197876733---65
Q gi|254780497|r 201 GGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDST--HLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVI---VT 275 (324)
Q Consensus 201 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~--gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~---~~ 275 (324)
...+....+. -++.+++.+.+.+.+.+++++++. ++...||++|++||+|+++++.+.++||++++++. .+
T Consensus 239 ---~~~~~g~~~~-l~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~di~~~~~Hq~~~~Ii~~v~~~Lgl~~~~~~~s~~~ 314 (361)
T cd00831 239 ---HLGEEGLTFV-LSRDVPRLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGGRAVLDAVEKALGLSPEDLEASRMV 314 (361)
T ss_pred ---CCCCCCEEEE-ECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf ---5057753785-063699999999999999999982589996772558878786899999999829896883257878
Q ss_pred HHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEE
Q ss_conf 86519330126999999999806889998999999714501456878
Q gi|254780497|r 276 VDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFTSGTVLL 322 (324)
Q Consensus 276 ~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~a~ll 322 (324)
+++||||+|+++|+.|+++++++++++||+++|++||+||||+++||
T Consensus 315 l~~~GNtsSaSip~~L~~~~~~~~~~~Gd~vl~~afG~Glt~~~~v~ 361 (361)
T cd00831 315 LRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred HHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHEEEEECC
T ss_conf 98638539889999999999739999999899999810405531209
No 17
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=100.00 E-value=2.8e-45 Score=308.20 Aligned_cols=299 Identities=22% Similarity=0.290 Sum_probs=248.2
Q ss_pred CEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf 22699999996498411788999880999878110247518898289889999999999999974021235443366501
Q gi|254780497|r 2 IRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVAT 81 (324)
Q Consensus 2 ~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s 81 (324)
|+++|.++|.|+|..+|..+|+++.++.+++++.+-+|+++|.|++.+|+..+||++||+++|+|+++||++|+.|+++|
T Consensus 1 ~~iGI~~~g~y~p~~~i~~~ela~~~g~d~~k~~~gl~~~e~sv~~~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgT 80 (377)
T COG3425 1 MMIGIVGIGAYIPRYRIKLEELARAWGVDPEKIKKGLGVEEKSVPPWDEDAVTMAVEAARNALKRADIDPSKIGAVIVGS 80 (377)
T ss_pred CCCCCCEEEEECCCEEEEHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEC
T ss_conf 95551238885662386099997632888377653004234467997420899999999998751388988966699953
Q ss_pred CCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 2233458985310011220268-644442101220034678889989641556531676302243222456632323454
Q gi|254780497|r 82 STPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGD 160 (324)
Q Consensus 82 ~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGD 160 (324)
.|+.+...+++.+|++.||+.+ +.++|+..+|-+++.||+.|.+++.+++.+++|||++|+...... + .--...|+
T Consensus 81 ES~~d~~K~~at~v~~~lg~~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~~~~--~-~~E~t~GA 157 (377)
T COG3425 81 ESGPDAVKPTATIVAEALGLNPSARAADVEFACYAGTAALQAAIGWVESGMISYGLVIGADTAQYAPG--D-ALEYTAGA 157 (377)
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCC--C-CCCCCCCC
T ss_conf 77765444058999998389975120567878998899999999999728755417996311035888--6-56766778
Q ss_pred CCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 43123440265446543445410123203555556177548765444332001032024445577777778888987400
Q gi|254780497|r 161 GAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHL 240 (324)
Q Consensus 161 GAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl 240 (324)
||+|+|+++.+....... ++...++ ....++.+.+.... ..+|+.....+.+.+...+++.+++.++
T Consensus 158 GavA~lIg~n~~~~a~~~-----~~~syt~--d~~DFwRp~~~~yp------~~dg~~s~~~Y~~~~~~a~~~~~~k~gl 224 (377)
T COG3425 158 GAVAFLIGKNPPIVAEFE-----GTGSYTT--DTPDFWRPDGQPYP------YVDGRFSEPAYFKHVENAAKGYMEKTGL 224 (377)
T ss_pred CEEEEEEECCCCEEEEEC-----CCEEEEC--CCCCCCCCCCCCCC------CCCCEECHHHHHHHHHHHHHHHHHHHCC
T ss_conf 608999806987278724-----7567745--77761466898466------4076355899999999999999998389
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH---HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCE
Q ss_conf 1000121024444415899999971978767336---5865193301269999999998068899989999997145014
Q gi|254780497|r 241 TIENIDWFVPHQANWRIINSIVDKMKIPFDKVIV---TVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFTS 317 (324)
Q Consensus 241 ~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~---~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~ 317 (324)
+++|+|++++|||+.+|-...++.|+.+.+++.. ..++.||++++|+++.|..+|+... .+||+|+++|||+|...
T Consensus 225 s~~dfdy~vfH~P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~Ld~a~-~~G~rIl~~SYGSGa~s 303 (377)
T COG3425 225 SPDDFDYIVFHQPNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSGAGS 303 (377)
T ss_pred CHHHHCEEEECCCCCCHHHHHHHHHCCCHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCC-CCCCEEEEEEECCCCCE
T ss_conf 84550759831798724899999857347662843011665275111069999999985267-88887999960788525
No 18
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=8.1e-43 Score=293.03 Aligned_cols=314 Identities=23% Similarity=0.315 Sum_probs=242.0
Q ss_pred EEEEEEEEECCCCEECHHHHHHHH----C-CCHHHH----HHCCCCCEEEEECCC-----------------CCHHHHHH
Q ss_conf 699999996498411788999880----9-998781----102475188982898-----------------89999999
Q gi|254780497|r 4 STVRGIGLSLPRRVLSNSDLESIV----D-TSDGWI----KRRVGISRRHIAGKD-----------------ETTASLGE 57 (324)
Q Consensus 4 ~~I~~~g~ylP~~~v~~~el~~~~----~-~~~~~i----~~~~GI~~R~~~~~~-----------------e~~~~la~ 57 (324)
+.|.|+++++|++.+.+.|+...+ . ...+.| .++.+|++|+...|. |.+.++++
T Consensus 2 a~i~sv~t~~Ppy~~~Qse~~d~f~~~~~~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~~l~v 81 (356)
T COG3424 2 AVIASVATALPPYRYNQSEITDSFAELPFQEGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAVPLGV 81 (356)
T ss_pred CEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEECCCHHHCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 25400005799643566788999987315222678899986533625121226276641788756630349998799999
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCC-CCCCC-CCCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf 999999974021235443366501223345898531001122026864-44421-0122003467888998964155653
Q gi|254780497|r 58 AAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGF-AFDMQ-AVCSGFVYAVTTADSYIRSGVVRRV 135 (324)
Q Consensus 58 ~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~-~~di~-~~C~~~~~al~~A~~li~~g~~~~~ 135 (324)
+|+|+||+.+++.|+|||+|+++|+|+ ...|+.-.+|.++||+++.. -+-+. .||+++..+|..|++++++.+..++
T Consensus 82 ~a~r~aL~~~~l~pedId~vv~vtsTG-~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~~~v 160 (356)
T COG3424 82 DALRRALDGSPLRPEDIDAVVTVTSTG-LATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPDANV 160 (356)
T ss_pred HHHHHHHCCCCCCHHHCCEEEEEEECC-CCCCCHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 999988526999977886799995025-5478754998861399976405220032014211578999999750866508
Q ss_pred EEEEECCCCCCCCCCCCC-----CCCCCCCCCCEEEEECCCCC-CCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCC
Q ss_conf 167630224322245663-----23234544312344026544-654344541012320355555617754876544433
Q gi|254780497|r 136 MVIGSDTFSRIVDWSDRS-----TCVLFGDGAGALILEGVEVK-GSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTV 209 (324)
Q Consensus 136 Lvv~~e~~S~~~d~~d~~-----~~~lfGDGAaA~ll~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (324)
||||.|.||-..-+.|+. ...+||||++|++++.+... ........++++...-.....+.+-|+.+....+
T Consensus 161 lvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~StL~~dse~~Mgwdv~d~G~~-- 238 (356)
T COG3424 161 LVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPDSEDIMGWDVGDQGLK-- 238 (356)
T ss_pred EEEEEEEEEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEECCCCEE--
T ss_conf 999946321554347887545133330048705899834643346678975000454546886210011530488479--
Q ss_pred CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHH---HHHHHHHCCCHHHH
Q ss_conf 200103202444557777777888898740010001210244444158999999719787673---36586519330126
Q gi|254780497|r 210 GCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKV---IVTVDIHGNTSAAS 286 (324)
Q Consensus 210 ~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~---~~~~~~~Gn~~sas 286 (324)
-.+ .+.+...+-..+...+..+|+.++++.+||+.|+.|++++++++++.+.||+++++. +..+.+|||++|++
T Consensus 239 ~vl---Srdlp~lIe~~l~~~V~~fL~~~~ls~~dI~~w~~HPGG~KVida~~~sLgls~e~l~~s~~~L~~~GNMSSat 315 (356)
T COG3424 239 VVL---SRDLPNLIESYLAPNVTTFLATHGLSIEDIEAWVVHPGGPKVIDAYEESLGLSPEALELSWDVLREYGNMSSAT 315 (356)
T ss_pred EEE---CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHH
T ss_conf 997---57326899998525589999976876654111555799706999998761899889999999999827865210
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEEEC
Q ss_conf 99999999980688999899999971450145687869
Q gi|254780497|r 287 IPLALAVAVKEGRVKKGDCLLLEAMGGGFTSGTVLLRW 324 (324)
Q Consensus 287 ~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~a~llrw 324 (324)
+++.|.+.+++. -++|++++|.++|+||+...++++|
T Consensus 316 vLfVL~d~l~~~-~~~g~~Gl~~A~GPGf~sElvL~~w 352 (356)
T COG3424 316 VLFVLEDTLQKA-PKSGSRGLMFAMGPGFCSELVLLDW 352 (356)
T ss_pred HHHHHHHHHHHC-CCCCCCEEEEECCCCCEEEEEEEEE
T ss_conf 299999999736-8877630345327863222445773
No 19
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=100.00 E-value=8.5e-39 Score=267.37 Aligned_cols=239 Identities=26% Similarity=0.297 Sum_probs=196.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 89889999999999999974021235443366501223345898531001122026864444210122003467888998
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSY 126 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~l 126 (324)
.++++++||+.+|+++||+++|++++|||.||++|+++++..|+.+++|+.+||+++.++|+++.+|+|++.||..|.++
T Consensus 2 ~~g~~~s~la~~Aa~~Al~dAGi~~~~i~~viv~t~t~~~~~p~~a~~v~~~lgl~~~p~~~v~~aCss~~~Al~~A~~~ 81 (254)
T cd00327 2 GLGITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISGGPAYSVNQACATGLTALALAVQQ 81 (254)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHH
T ss_conf 98844999999999999998299854688999999787502247999999982999988066120243777999999999
Q ss_pred HHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC--CCCEEEEEECCCCCCCCEEECCCCC
Q ss_conf 96415565316763022432224566323234544312344026544654344--5410123203555556177548765
Q gi|254780497|r 127 IRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGDGAGALILEGVEVKGSSMAD--TGILSTYLCSDGSYIDKLYVDGGPS 204 (324)
Q Consensus 127 i~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGDGAaA~ll~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (324)
|++|+++++||+++|. ++|||||+|++|++.+........ ..+.+.....++
T Consensus 82 i~~G~~~~vlv~g~e~-------------~~~gdGAga~vl~~~~~a~~~~~~~~~~i~~~~~~~~g------------- 135 (254)
T cd00327 82 VQNGKADIVLAGGSEE-------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDG------------- 135 (254)
T ss_pred HHHCCCCEEEECCCEE-------------EEECCCCEEEEECCHHHHHCCCCCEEEEEECCCCCCCC-------------
T ss_conf 9958999899738768-------------87067608887302456653898514778513123469-------------
Q ss_pred CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHH-----HHHHHHHH
Q ss_conf 4443320010320244455777777788889874001000121024444415899999971978767-----33658651
Q gi|254780497|r 205 TSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDK-----VIVTVDIH 279 (324)
Q Consensus 205 ~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~-----~~~~~~~~ 279 (324)
. ..++....+...+.++++|+++|++++|||+|.+||.|.++.+.+..++.++.++ +..+..+|
T Consensus 136 ---~--------~~~~~p~~~~~~~~i~~al~~agl~~~dId~v~~H~tgt~i~D~iE~~a~~~~~~~~~~~i~s~k~~~ 204 (254)
T cd00327 136 ---A--------SMVPAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMT 204 (254)
T ss_pred ---C--------CCCCCCCHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf ---9--------86627887899999999999839986452579978887835459999865340069988706740141
Q ss_pred CCCHHHHHHHHHHHHH---HCCCC----CCCCEEEEEEECCCCCEEEEEE
Q ss_conf 9330126999999999---80688----9998999999714501456878
Q gi|254780497|r 280 GNTSAASIPLALAVAV---KEGRV----KKGDCLLLEAMGGGFTSGTVLL 322 (324)
Q Consensus 280 Gn~~sas~~~~L~~~~---~~g~l----~~Gd~vll~~~G~G~s~~a~ll 322 (324)
||+.+|+.++.|.+.+ +.+.+ ++++++++.+||.|.+|+++++
T Consensus 205 GH~~~Asg~~~l~~~~l~l~~~~ippt~~~~~~~~~~~fG~Ggt~~~~vl 254 (254)
T cd00327 205 GHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEEEC
T ss_conf 54299999999999999985598697899999999957564711057869
No 20
>TIGR01835 HMG-CoA-S_prok hydroxymethylglutaryl-CoA synthase; InterPro: IPR011554 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA . HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria . In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi . In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes , . This entry represents HMG-CoA synthase enzymes found in a limited spectrum of mostly Gram-positive bacteria, which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway..
Probab=100.00 E-value=8.3e-37 Score=254.65 Aligned_cols=296 Identities=19% Similarity=0.234 Sum_probs=238.8
Q ss_pred EEEEEEEEECCCCEECHHHHHH-----HHCCCHHHHHHCCC---CCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 6999999964984117889998-----80999878110247---518898289889999999999999974021235443
Q gi|254780497|r 4 STVRGIGLSLPRRVLSNSDLES-----IVDTSDGWIKRRVG---ISRRHIAGKDETTASLGEAAARDALHHAEMSVDDID 75 (324)
Q Consensus 4 ~~I~~~g~ylP~~~v~~~el~~-----~~~~~~~~i~~~~G---I~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id 75 (324)
++|..|+.|+|+++++-++|++ .-|..+|++.+-+| -++-.+.+.+|+.++||+.||+.-|++.+++.++||
T Consensus 1 IGI~~I~F~~p~~yl~~~~LAEnPLYF~~gv~p~K~~~GIgatLQ~~~~~~~~~eDiVTmAA~Aa~~Il~~~nLd~~~Id 80 (412)
T TIGR01835 1 IGIDKISFFTPQYYLDLTALAENPLYFARGVDPEKFSKGIGATLQKKMAVPPIDEDIVTMAASAAKPILDRNNLDKQKID 80 (412)
T ss_pred CCCCHHHHHCCCCCCCHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 97011234403000353566304114541766435757743677765068978864578899999974324206844234
Q ss_pred EEEEECCCCCCCCCCCCCCHHHHHHCC-CCC-----CCCCCCCCCCHHHHHHHHHHHHHHCCC-CCCEEEEECCCCCCCC
Q ss_conf 366501223345898531001122026-864-----444210122003467888998964155-6531676302243222
Q gi|254780497|r 76 LIIVATSTPDQTFPSTAVNIQNRLGMK-RGF-----AFDMQAVCSGFVYAVTTADSYIRSGVV-RRVMVIGSDTFSRIVD 148 (324)
Q Consensus 76 ~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~-----~~di~~~C~~~~~al~~A~~li~~g~~-~~~Lvv~~e~~S~~~d 148 (324)
.||++|.|+-+..++.|.+|++.||+. .|. +|+|.++|.|.+.|||+|...++..|. ++|||+++|+. +
T Consensus 81 ~Vi~gTESgID~SKAaavyvh~LLgl~p~cRGnnFL~~ElK~ACYGATAaLq~A~~hv~~~P~s~kVLViaSDiA-k--- 156 (412)
T TIGR01835 81 MVIFGTESGIDQSKAAAVYVHGLLGLQPFCRGNNFLSFELKQACYGATAALQMAKGHVARSPNSRKVLVIASDIA-K--- 156 (412)
T ss_pred EEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEE-E---
T ss_conf 789751052668999999999982778431045422432777779999999999999851888660168886311-2---
Q ss_pred CCCCCCC-CCCCCCCCEEEEECCCCCCCCCCCCC-CEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHH
Q ss_conf 4566323-23454431234402654465434454-101232035555561775487654443320010320244455777
Q gi|254780497|r 149 WSDRSTC-VLFGDGAGALILEGVEVKGSSMADTG-ILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEK 226 (324)
Q Consensus 149 ~~d~~~~-~lfGDGAaA~ll~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 226 (324)
|....+. .+-|-||.|+|++.+|.-........ +++ + -..++|.|.+. ..-..||+..-+.++..
T Consensus 157 Y~~~t~GE~TQGAGAVA~Li~~dP~~l~i~~~~~G~~T-----~--DimDFWRP~y~------~~a~VdG~~S~~~Yl~a 223 (412)
T TIGR01835 157 YGLETPGEATQGAGAVAMLISADPKLLAINEDSVGLYT-----D--DIMDFWRPNYS------TTALVDGQYSTEQYLNA 223 (412)
T ss_pred CCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCEEC-----C--CCCCCCCCCCC------CCCEECCCHHHHHHHHH
T ss_conf 27798988616689999987418012001587653121-----3--31212178988------55316460468899999
Q ss_pred HHHHHHHHHHHHHCCCCCCCC---CCCCCCCHHH-HHHHHHHC---CCCHH--HHH-----H--HHH------HHCCCHH
Q ss_conf 777788889874001000121---0244444158-99999971---97876--733-----6--586------5193301
Q gi|254780497|r 227 AVELIEKVFDSTHLTIENIDW---FVPHQANWRI-INSIVDKM---KIPFD--KVI-----V--TVD------IHGNTSA 284 (324)
Q Consensus 227 ~~~~i~~~L~~~gl~~~did~---~~~Hq~~~~~-~~~~~~~l---gl~~e--~~~-----~--~~~------~~Gn~~s 284 (324)
+.++|++.-++.|++.+|++. ||+|+|=.+| .++....| .-+.+ ++- + --+ +.||+++
T Consensus 224 ~~~aW~dy~~~~~~~l~DfaanYR~~fH~PftKMg~Ka~~~~l~~~~~~~~k~~~~~~y~~Si~Y~~Gveaam~vGN~YT 303 (412)
T TIGR01835 224 LEEAWNDYKERTGLSLEDFAANYRFCFHVPFTKMGLKALRHILKKNKEDEDKDSVQKAYEESILYNRGVEAAMEVGNLYT 303 (412)
T ss_pred HHHHHHHHHHHCCCCHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 99999999972389756753157178707874203799999874047812689999987533678523443333054137
Q ss_pred HHHHHHHHHHHHCC---CCCCCCEEEEEEECCCCC
Q ss_conf 26999999999806---889998999999714501
Q gi|254780497|r 285 ASIPLALAVAVKEG---RVKKGDCLLLEAMGGGFT 316 (324)
Q Consensus 285 as~~~~L~~~~~~g---~l~~Gd~vll~~~G~G~s 316 (324)
+|++|+|..+|++- .+..|++|.|+|||+|-.
T Consensus 304 GSlyLgL~sLLena~sk~d~tG~~Igl~SYGSGav 338 (412)
T TIGR01835 304 GSLYLGLASLLENAQSKEDLTGDKIGLFSYGSGAV 338 (412)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCE
T ss_conf 88999999986303664431311111001252201
No 21
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative; InterPro: IPR004656 This family of archaeal proteins shows considerable homology and identical active site residues to FabH, the beta-ketoacyl-acyl carrier protein synthase III of bacteria and plants. The archaeal species in which it is found, however, do not have a readily detectable homolog of acyl carrier protein itself, suggesting the condensation of the acyl group with some other carrier. In Methanococcus jannaschii, Q58941 from SWISSPROT, Cys-112 is the site of acyl group attachment and His-234 and Asn-237 are also active site residues by homology to FabH. Closely related bacterial families include a polyketide antibiotic (2,4-diacetylphloroglucinol) biosynthesis protein from Pseudomonas fluorescens and an uncharacterised protein from Staphylococcus carnosus. .
Probab=100.00 E-value=1.2e-32 Score=228.13 Aligned_cols=300 Identities=20% Similarity=0.284 Sum_probs=240.9
Q ss_pred EEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
Q ss_conf 69999999649841178899988099987811024751889828988999999999999997402123544336650122
Q gi|254780497|r 4 STVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATST 83 (324)
Q Consensus 4 ~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~ 83 (324)
++|.|.|.|+|..++.+||+.+.|+.+++.|.+..-|+++.+...||++.+++++|+|++|+|+.+||+||..|.++|.+
T Consensus 2 ~GivGyG~y~P~yri~~eei~rvW~~dp~~i~~g~~~~ek~vP~~ded~~ti~~eaarnal~r~~idP~~i~a~~~Gses 81 (347)
T TIGR00748 2 AGIVGYGAYIPKYRIKVEEIARVWGDDPEAISKGLLVEEKAVPGLDEDTATIAVEAARNALKRAKIDPKDIGAVYVGSES 81 (347)
T ss_pred CCEEEECCCCCCEEECHHHHHHHHCCCHHHHHCCEEEEECCCCCCCCCCEEEHHHHHHHHHHHCCCCHHHCCEEEECCCC
T ss_conf 41576210115311102344433056636865570255324788663400111467787776304784164177960568
Q ss_pred CCCCCCCCCCCHHHHHHCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 3345898531001122026864-444210122003467888998964155653167630224322245663232345443
Q gi|254780497|r 84 PDQTFPSTAVNIQNRLGMKRGF-AFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGDGA 162 (324)
Q Consensus 84 ~~~~~p~~a~~i~~~LGl~~~~-~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGDGA 162 (324)
.+|...+++..|++.++.++.+ +-|+..+|.++..+|+.+..++++|..+++|.|++|..... +.|.-- +.-+.|.
T Consensus 82 ~PyavkP~~t~~aea~~atP~l~aad~efaCkaGt~~~q~~~G~v~sG~~ky~la~GadtaqG~--PGd~le-~ta~aGG 158 (347)
T TIGR00748 82 KPYAVKPTATIVAEAIEATPDLTAADLEFACKAGTAGIQACIGLVESGLIKYGLAIGADTAQGA--PGDALE-YTAAAGG 158 (347)
T ss_pred CCCEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCCE-ECCCCCC
T ss_conf 6510064035554454057574022135555521688998875676446665543124102689--863100-0003785
Q ss_pred CEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 12344026544654344541012320355555617754876544433200103202444557777777888898740010
Q gi|254780497|r 163 GALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTI 242 (324)
Q Consensus 163 aA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~ 242 (324)
+|.+++....... ..+-.++..+. -...++...+...++....|.- .+..|++++ ...+.++++.|+++
T Consensus 159 aa~~iG~~~~~~~----a~~~~~ysy~t--dtPdf~rr~~~~yPrhG~rftG-ePayf~hv~----~aa~~lm~~~G~~~ 227 (347)
T TIGR00748 159 AAYIIGEKNSEVV----AEFEGTYSYTT--DTPDFWRREGKPYPRHGGRFTG-EPAYFKHVV----TAAKGLMEKLGLKP 227 (347)
T ss_pred EEEEECCCCHHHH----HHHHCCEEEEE--CCCHHHHHCCCCCCCCCCCCCC-CHHHHHHHH----HHHHHHHHHHCCCC
T ss_conf 2688607512234----31103322420--6815664067878877875467-637899999----99999999727882
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH-H-HHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEE
Q ss_conf 00121024444415899999971978767336-5-86519330126999999999806889998999999714501456
Q gi|254780497|r 243 ENIDWFVPHQANWRIINSIVDKMKIPFDKVIV-T-VDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFTSGT 319 (324)
Q Consensus 243 ~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~-~-~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~a 319 (324)
+|+|+.++||||.++.-..++.||++.|+... . -..+||++|...++.|...++. .++|++||.++||+|--.-+
T Consensus 228 ~d~dy~vfhqPn~kf~~~~a~~lG~~~e~~~~Gll~~~iGntysGa~~~G~~~~ld~--~~~G~ril~vs~GsGaGsda 304 (347)
T TIGR00748 228 EDFDYAVFHQPNGKFYLKAARILGFKKEQVKPGLLTPVIGNTYSGATPVGLSAVLDV--AEPGERILAVSYGSGAGSDA 304 (347)
T ss_pred CCCCEEEEECCCCCEEEEEHHHHCCCHHCEECCCCCCCCCCCCCCHHHHHHHHHHHC--CCCCCEEEEEEECCCCCCCE
T ss_conf 314147875587504441123407510100001012333543233145546777530--47886489996067767533
No 22
>pfam00195 Chal_sti_synt_N Chalcone and stilbene synthases, N-terminal domain. The C-terminal domain of Chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in this N-terminal domain.
Probab=99.95 E-value=2.1e-27 Score=194.60 Aligned_cols=168 Identities=20% Similarity=0.274 Sum_probs=137.4
Q ss_pred EEEEEEEEEECCCCEECHHHHHHHH----CC---CH-----HHHHHCCCCCEEEEECCCC--------------------
Q ss_conf 2699999996498411788999880----99---98-----7811024751889828988--------------------
Q gi|254780497|r 3 RSTVRGIGLSLPRRVLSNSDLESIV----DT---SD-----GWIKRRVGISRRHIAGKDE-------------------- 50 (324)
Q Consensus 3 ~~~I~~~g~ylP~~~v~~~el~~~~----~~---~~-----~~i~~~~GI~~R~~~~~~e-------------------- 50 (324)
.++|.|||+.+|++.++++++.+.. +. .+ ..|.+++||++||..-++|
T Consensus 16 pA~Il~IgTA~Pp~~~~Q~~~~d~~~~~~~~~~~~~~k~~l~ri~~~sgI~~R~~vl~~e~~~~~P~~~~~~~ps~~~R~ 95 (228)
T pfam00195 16 PATILAIGTATPSNCVDQSTYPDYYFRVTKSEHLTDLKEKFQRICEKSTIKKRYMVLTEEILKENPELCTEMAPSLDARQ 95 (228)
T ss_pred CEEEEEEEEECCCCEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCCCCCHHHHH
T ss_conf 96999999718995524899999999973443242678999989984698831586176876149551025699989999
Q ss_pred -----CHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCC-CCCCC-CCCCCHHHHHHHH
Q ss_conf -----9999999999999974021235443366501223345898531001122026864-44421-0122003467888
Q gi|254780497|r 51 -----TTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGF-AFDMQ-AVCSGFVYAVTTA 123 (324)
Q Consensus 51 -----~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~-~~di~-~~C~~~~~al~~A 123 (324)
...+|+.+|+++||+++|++++||++||++|+|+ +..|+...+|.++||+++.. -+.|. .||+|++.+|++|
T Consensus 96 ~~~~~~a~~La~~Aa~~AL~~aG~~~~dIthlv~vt~TG-~~~Pg~d~~l~~~LGL~~~v~R~~i~~~GC~gg~~gL~~A 174 (228)
T pfam00195 96 DIAVVEVPKLGKEAALKAIKEWGQPKSKITHLVFCTTSG-VDMPGADYQLTKLLGLRPSVKRVMLYQQGCFAGGTVLRLA 174 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCC-CCCCCHHHHHHHHCCCCCCCHHEEEECCCCHHHHHHHHHH
T ss_conf 999999999999999999999588988999999994799-9887478999998298987211141145416489999999
Q ss_pred HHHHHHCCCCCCEEEEECCCCCCCCC---CC---CCCCCCCCCCCCEEEEECCC
Q ss_conf 99896415565316763022432224---56---63232345443123440265
Q gi|254780497|r 124 DSYIRSGVVRRVMVIGSDTFSRIVDW---SD---RSTCVLFGDGAGALILEGVE 171 (324)
Q Consensus 124 ~~li~~g~~~~~Lvv~~e~~S~~~d~---~d---~~~~~lfGDGAaA~ll~~~~ 171 (324)
.+++++++..+||||++|.+|-.+.. .+ .....||||||+|+||+.++
T Consensus 175 ~~~~~~~p~~~VLvv~~Elcsl~f~~~~~~~~~~lV~~aLFgDGAaAvvv~adP 228 (228)
T pfam00195 175 KDLAENNKGARVLVVCSEITAVTFRGPSETHLDSLVGQALFGDGAAAVIIGSDP 228 (228)
T ss_pred HHHHHHCCCCEEEEEEEEHHHEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCC
T ss_conf 999982999879999824011030488765677773441202751799971699
No 23
>TIGR01833 HMG-CoA-S_euk hydroxymethylglutaryl-CoA synthase; InterPro: IPR010122 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA . HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria . In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi . In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes , . This entry is specific for eukaryotic HMG-CoA synthase enzymes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process.
Probab=99.93 E-value=8.2e-25 Score=178.13 Aligned_cols=302 Identities=16% Similarity=0.190 Sum_probs=214.5
Q ss_pred CEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf 22699999996498411788999880999878110247518898289889999999999999974021235443366501
Q gi|254780497|r 2 IRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVAT 81 (324)
Q Consensus 2 ~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s 81 (324)
.+|+|.|+..|+|...|.+.|||..-+.+.++=---.|..+--++.+-|+...|+..|+.++++|..|++++|+.|=++|
T Consensus 3 ~dVGI~al~~yfP~~yV~Q~~LE~yDgVs~GKYTiGLGq~~mgFc~drEDI~Sl~LTvv~~L~er~~id~~~IGRLEVGT 82 (461)
T TIGR01833 3 KDVGILALEIYFPSQYVDQAELEKYDGVSAGKYTIGLGQTKMGFCTDREDINSLCLTVVSKLMERYQIDYNKIGRLEVGT 82 (461)
T ss_pred CCCEEEEEEEECCCCCCCHHHHHHHCCCCCCCEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCC
T ss_conf 87406888863688752657786326888895034235662000022101566658999999986078715431101042
Q ss_pred CCCCCCCCCCCCCHH---HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC--CCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 223345898531001---12202686444421012200346788899896415--5653167630224322245663232
Q gi|254780497|r 82 STPDQTFPSTAVNIQ---NRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGV--VRRVMVIGSDTFSRIVDWSDRSTCV 156 (324)
Q Consensus 82 ~~~~~~~p~~a~~i~---~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~--~~~~Lvv~~e~~S~~~d~~d~~~~~ 156 (324)
.|--+-..|.=+.+. ++-|-++....|-.++|-|++.||-.|..||++.. .|++||||+|.. + |..-...+
T Consensus 83 ETiiDKSKSVKtVLMQLF~~sGNTDvEGiDt~NACYGGTaALFNa~~WiESssWDGRyalVVagDiA--v--Ya~G~ARP 158 (461)
T TIGR01833 83 ETIIDKSKSVKTVLMQLFEESGNTDVEGIDTVNACYGGTAALFNAINWIESSSWDGRYALVVAGDIA--V--YAKGNARP 158 (461)
T ss_pred EEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEE--E--CCCCCCCC
T ss_conf 5341001035577677542057954353255341122479997545432126753034124532111--3--48889887
Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHH-------
Q ss_conf 3454431234402654465434454101232035555561775487654443320010320244455777777-------
Q gi|254780497|r 157 LFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVE------- 229 (324)
Q Consensus 157 lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------- 229 (324)
+-|.||.|+|+++..|- ..+.++-++|..+--.|+- |.- ...+-..||+...+-+++++-.
T Consensus 159 TGGAGavAmLiGp~APi---vfe~glR~shM~HaYDFYK----PdL-----~SEYP~VDGklS~~CYl~ALD~cY~~y~~ 226 (461)
T TIGR01833 159 TGGAGAVAMLIGPNAPI---VFERGLRASHMQHAYDFYK----PDL-----ASEYPVVDGKLSIQCYLSALDRCYKSYCK 226 (461)
T ss_pred CHHHHHHHHHHCCCCCE---EECCCCCHHHHCCCCCCCC----CCC-----CCCCCEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 52899999975689888---7427754122214533368----888-----31685044530587899898888899888
Q ss_pred ----HHHHHHHH-HHCCCCCCCCCCCCCCC-HHHHHHHHHHC------------------------CCCH---------H
Q ss_conf ----78888987-40010001210244444-15899999971------------------------9787---------6
Q gi|254780497|r 230 ----LIEKVFDS-THLTIENIDWFVPHQAN-WRIINSIVDKM------------------------KIPF---------D 270 (324)
Q Consensus 230 ----~i~~~L~~-~gl~~~did~~~~Hq~~-~~~~~~~~~~l------------------------gl~~---------e 270 (324)
...+.=.. ...+.+++|++|+|.|- +.+.+.+++-| ++.- |
T Consensus 227 K~~~~~~~~~~~~~~f~l~~~dy~vFH~PyCKlVqKS~ARLlyNDF~~~~~~~~~~~~~~~~~~l~~l~~~~ty~drd~E 306 (461)
T TIGR01833 227 KIEKQLGKSGKDGRKFTLDDFDYMVFHSPYCKLVQKSLARLLYNDFLANPSSETDTALYEVLEALSTLKLEDTYTDRDLE 306 (461)
T ss_pred HHHHHHHCCCCCCCCCCHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHH
T ss_conf 89987420244676330634473675077322689999999888876322344556666667765337711200232588
Q ss_pred HHHHH----------------HHHHCCCHHHHHHHHHHHHHHCCCCC--CCCEEEEEEECCCCCEEE
Q ss_conf 73365----------------86519330126999999999806889--998999999714501456
Q gi|254780497|r 271 KVIVT----------------VDIHGNTSAASIPLALAVAVKEGRVK--KGDCLLLEAMGGGFTSGT 319 (324)
Q Consensus 271 ~~~~~----------------~~~~Gn~~sas~~~~L~~~~~~g~l~--~Gd~vll~~~G~G~s~~a 319 (324)
|.+.. -.+.||++++|++-.|..++.+.... .|.+|.+.|||+|++.+.
T Consensus 307 K~~~~~sk~~f~~k~~~Sl~~~~~~GNMYT~SlYg~laSLL~~~~~~eLaGkRv~~FSYGSGlAAs~ 373 (461)
T TIGR01833 307 KAFMKISKELFDKKVKPSLLLPTQVGNMYTASLYGCLASLLSSKSADELAGKRVGLFSYGSGLAASL 373 (461)
T ss_pred HHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCEEEEEECCHHHHHHH
T ss_conf 9999999998861020002100057864007899999999740780130775699863624554321
No 24
>pfam01154 HMG_CoA_synt_N Hydroxymethylglutaryl-coenzyme A synthase N terminal.
Probab=99.92 E-value=4.5e-24 Score=173.40 Aligned_cols=165 Identities=18% Similarity=0.173 Sum_probs=147.0
Q ss_pred EEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf 26999999964984117889998809998781102475188982898899999999999999740212354433665012
Q gi|254780497|r 3 RSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATS 82 (324)
Q Consensus 3 ~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~ 82 (324)
+|+|.+++.|+|...++.++|++..|.+++++.+..|.+++.+++++|+..+||+.|++++|++.+++|++|+.|+++|.
T Consensus 1 ~VGI~~i~~Y~P~~~v~~~~La~~rg~d~~K~~~GlG~~~mav~~~~ED~vTmAanAa~~ll~~~~i~~~~Ig~l~vgTE 80 (171)
T pfam01154 1 DVGIVALEIYFPSQYVDQAELEKYDGVSAGKYTIGLGQTKMGFCTDREDINSLCLTVVQKLMERNNLDYDCIGRLEVGTE 80 (171)
T ss_pred CCCEEEEEEECCHHEECHHHHHHHHCCCHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEECCC
T ss_conf 98987898847711135999999959898885204586354279997279999999999999873999888407996377
Q ss_pred CCCCCCCCCCCCHHHHHHCC-CC--CCCCCCCCCCCHHHHHHHHHHHHHHCC--CCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 23345898531001122026-86--444421012200346788899896415--56531676302243222456632323
Q gi|254780497|r 83 TPDQTFPSTAVNIQNRLGMK-RG--FAFDMQAVCSGFVYAVTTADSYIRSGV--VRRVMVIGSDTFSRIVDWSDRSTCVL 157 (324)
Q Consensus 83 ~~~~~~p~~a~~i~~~LGl~-~~--~~~di~~~C~~~~~al~~A~~li~~g~--~~~~Lvv~~e~~S~~~d~~d~~~~~l 157 (324)
+.-+...+++.+|++.||++ ++ ..+|+.++|.|++.||+.|.+++++++ .|++|||++|.. ++ +... .-..
T Consensus 81 S~iD~SKs~~t~l~~ll~~~~~~~~~~~e~k~ACyggTaAL~~a~~~v~s~~~~~k~alVV~sDiA-~y-~~~~--~e~T 156 (171)
T pfam01154 81 TIIDKSKSVKTVLMQLFEESGNTDIEGIDTTNACYGGTAALFNALNWIESSSWDGRYALVVAGDIA-IY-AKGN--ARPT 156 (171)
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC-CC-CCCC--CCCC
T ss_conf 645665568999999837657887403330010698999999999999828878963999984100-13-7999--8756
Q ss_pred CCCCCCEEEEECCC
Q ss_conf 45443123440265
Q gi|254780497|r 158 FGDGAGALILEGVE 171 (324)
Q Consensus 158 fGDGAaA~ll~~~~ 171 (324)
-|-||.|+|+++..
T Consensus 157 qGAGAVAmLv~~na 170 (171)
T pfam01154 157 GGAGAVAMLIGPNA 170 (171)
T ss_pred CCCCEEEEEECCCC
T ss_conf 77035899975899
No 25
>KOG1393 consensus
Probab=99.91 E-value=9.2e-23 Score=165.03 Aligned_cols=304 Identities=17% Similarity=0.188 Sum_probs=212.7
Q ss_pred EEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf 26999999964984117889998809998781102475188982898899999999999999740212354433665012
Q gi|254780497|r 3 RSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATS 82 (324)
Q Consensus 3 ~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~ 82 (324)
+++|.++..|+|.+.|.++|+++..+.+.++..-..|-.+..++.+.|+...|+..++++++++.+++++.|+.|-++|.
T Consensus 11 dvGI~aieiyfP~~yV~Q~elEk~d~vs~gKytIGLGq~~MgfcsdrEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVGTE 90 (462)
T KOG1393 11 DVGIIAIEIYFPSQYVDQEELEKFDGVSAGKYTIGLGQTQMGFCSDREDIISLSLTVVSRLMERYNIDPDSIGRLEVGTE 90 (462)
T ss_pred CCCEEEEEEECCCCCCCHHHHHHCCCCCCCCEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEECCE
T ss_conf 35426899976756667666762488544625763475121253763320035599999999983898656411773230
Q ss_pred CCCCCCCCCCCCHHHHH---HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC--CCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 23345898531001122---0268644442101220034678889989641--556531676302243222456632323
Q gi|254780497|r 83 TPDQTFPSTAVNIQNRL---GMKRGFAFDMQAVCSGFVYAVTTADSYIRSG--VVRRVMVIGSDTFSRIVDWSDRSTCVL 157 (324)
Q Consensus 83 ~~~~~~p~~a~~i~~~L---Gl~~~~~~di~~~C~~~~~al~~A~~li~~g--~~~~~Lvv~~e~~S~~~d~~d~~~~~l 157 (324)
|-..-..|.-+.+.+.+ |-++....|..++|-|+..||-.|..+|++. ..|++|||++|+.- |........
T Consensus 91 TiiDKSKSVKt~LMqLF~~sgNtdIEGiDttnACYGGtaALfnavnWiESssWDGr~aivV~gDIAv----Y~~G~aRpT 166 (462)
T KOG1393 91 TIIDKSKSVKTVLMQLFEESGNTDIEGIDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDIAV----YAKGNARPT 166 (462)
T ss_pred ECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEE----ECCCCCCCC
T ss_conf 0245325799999997101389754344344301233899987765521144577414899733787----147887777
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHH----HHHHHH
Q ss_conf 4544312344026544654344541012320355555617754876544433200103202444557777----777888
Q gi|254780497|r 158 FGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKA----VELIEK 233 (324)
Q Consensus 158 fGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~i~~ 233 (324)
-|-||.|+|+++..+- ..+.++..+|+.+...++. |. ....+-..||+...+.+...+ .....+
T Consensus 167 GGAgAVAmLIgPnApi---~ferglr~thM~hayDFyK----Pd-----l~SEyPvVDGklSi~cYl~Ald~cY~~~~kK 234 (462)
T KOG1393 167 GGAGAVAMLIGPNAPI---IFERGLRATHMQHAYDFYK----PD-----LLSEYPVVDGKLSIQCYLSALDRCYTVYRKK 234 (462)
T ss_pred CCCCEEEEEECCCCCE---EECCCCHHHHHHHHHHCCC----CC-----CCCCCCEECCEEHHHHHHHHHHHHHHHHHHH
T ss_conf 8733589997699855---7445303446565430148----88-----7786862568021898999999999999999
Q ss_pred HH----HHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCC----------C-------------------------------
Q ss_conf 89----87400100012102444441589999997197----------8-------------------------------
Q gi|254780497|r 234 VF----DSTHLTIENIDWFVPHQANWRIINSIVDKMKI----------P------------------------------- 268 (324)
Q Consensus 234 ~L----~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl----------~------------------------------- 268 (324)
.- ...+...+++|++++|.|--++.++-..+|-. +
T Consensus 235 ~~~~~~~~~~~~l~~fdy~ifHsP~cKlvqKs~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~ 314 (462)
T KOG1393 235 IAAQWQKSGSDNLNSFDYIIFHSPYCKLVQKSLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPI 314 (462)
T ss_pred HHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99974335676546577599857035667877777543144414001542001223333000111047788899876777
Q ss_pred -HHHHHHH---HHHHCCCHHHHHHHHHHHHHHCC--CCCCCCEEEEEEECCCCCEEEEEE
Q ss_conf -7673365---86519330126999999999806--889998999999714501456878
Q gi|254780497|r 269 -FDKVIVT---VDIHGNTSAASIPLALAVAVKEG--RVKKGDCLLLEAMGGGFTSGTVLL 322 (324)
Q Consensus 269 -~e~~~~~---~~~~Gn~~sas~~~~L~~~~~~g--~l~~Gd~vll~~~G~G~s~~a~ll 322 (324)
.+|+-.. -.+.||++++|++..|..++... .--.|++|.+.|||+|++.+.--+
T Consensus 315 ~~~Kt~~sl~~~~~~GNmYTaSly~~l~sll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~ 374 (462)
T KOG1393 315 FKKKTKPSLLAPRRNGNMYTASLYASLASLLSAVPADELAGKRIGMFSYGSGLAASMFSL 374 (462)
T ss_pred HHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHCCEEEEEEECCCCHHHEEEE
T ss_conf 775135116741247742249899999998851660443103788996057641204778
No 26
>pfam08541 ACP_syn_III_C 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal. This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.
Probab=99.90 E-value=2.5e-24 Score=175.03 Aligned_cols=90 Identities=53% Similarity=0.924 Sum_probs=88.4
Q ss_pred HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC
Q ss_conf 98740010001210244444158999999719787673365865193301269999999998068899989999997145
Q gi|254780497|r 235 FDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGG 314 (324)
Q Consensus 235 L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G 314 (324)
|+++|++++|||+|++||+|+++++.++++||+|+||++.++++|||++|+++|++|++++++++++|||+|++++||+|
T Consensus 1 L~~~g~~~~dId~~i~Hq~~~~~~~~i~~~lgi~~~k~~~~~~~~GN~~sasip~~L~~~~~~~~i~~Gd~vll~~~G~G 80 (90)
T pfam08541 1 LEKAGLTPDDIDWFVPHQANLRIIDAVAKRLGLPPEKVVVNLDRYGNTSAASIPLALDEAVEEGKLKPGDLVLLVGFGAG 80 (90)
T ss_pred CCCCCCCHHHCCEEEECCCCHHHHHHHHHHHCCCHHHCEEHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCC
T ss_conf 94404997999999978888899999999819791325032440377620239999999998199999998999987210
Q ss_pred CCEEEEEEEC
Q ss_conf 0145687869
Q gi|254780497|r 315 FTSGTVLLRW 324 (324)
Q Consensus 315 ~s~~a~llrw 324 (324)
++|+++++||
T Consensus 81 ~s~~~~v~~~ 90 (90)
T pfam08541 81 LTWGAAVLRW 90 (90)
T ss_pred HHHEEEEEEC
T ss_conf 4117989979
No 27
>pfam08392 FAE1_CUT1_RppA FAE1/Type III polyketide synthase-like protein. The members of this family are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region featured in this family contains the active site residues, as well as motifs involved in substrate binding.
Probab=99.83 E-value=1.3e-19 Score=144.92 Aligned_cols=198 Identities=17% Similarity=0.195 Sum_probs=144.3
Q ss_pred EEEEEEEEEECCC--CEECHHHHHHHHC----CCHH------HHHHCCCCCEEEEECCC-------CCH------HH-HH
Q ss_conf 2699999996498--4117889998809----9987------81102475188982898-------899------99-99
Q gi|254780497|r 3 RSTVRGIGLSLPR--RVLSNSDLESIVD----TSDG------WIKRRVGISRRHIAGKD-------ETT------AS-LG 56 (324)
Q Consensus 3 ~~~I~~~g~ylP~--~~v~~~el~~~~~----~~~~------~i~~~~GI~~R~~~~~~-------e~~------~~-la 56 (324)
.|++...++|.|+ .+++.+.+.+... .+++ +|.+++||.+..+.++. .+. .+ .-
T Consensus 8 ~vYLvDfaC~kp~~~~kv~~~~~~e~~~~~~~f~~~s~~F~~kil~rSGlG~eTy~P~~~~~~p~~~s~~~ar~Eae~v~ 87 (290)
T pfam08392 8 PVYLVDYACYKPPDDRKVSTETFMEHIRRNGKFDEESLDFQRKILERSGLGEETYVPRSVLEIPPNPTMAEAREEAEEVM 87 (290)
T ss_pred CEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf 88998553207972031699999999986589986899999999996489998857825425899987999999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCC-CCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 9999999974021235443366501223345898531001122026-86444421-012200346788899896415565
Q gi|254780497|r 57 EAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQ-AVCSGFVYAVTTADSYIRSGVVRR 134 (324)
Q Consensus 57 ~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~-~~C~~~~~al~~A~~li~~g~~~~ 134 (324)
-.|+.++|+++|++|+|||.||+. |+...+.||.+++|.++.|++ ++..|.++ +||++++.++++|.++++..+..+
T Consensus 88 f~avd~Lf~ktgv~P~dIdiLVvN-cSlf~PtPSLsamivNrykmR~di~s~nLsGMGCSAglIsIdLAk~lL~~~~ns~ 166 (290)
T pfam08392 88 FGAVDELFAKTGVRPRDIGILVVN-CSLFNPTPSLSAMIVNRYKMRGDIKSYNLSGMGCSAGLISIDLAKDLLQVHPNTY 166 (290)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEEE-CCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCE
T ss_conf 999999999739987689999996-7788888528999988606864300633667651134757999999998489965
Q ss_pred CEEEEECCCCCCCC-CCCCC---CCCCCCCCCCEEEEECCCCCC--CCCCCCCCEEEEEECCCCCCCCEEECC
Q ss_conf 31676302243222-45663---232345443123440265446--543445410123203555556177548
Q gi|254780497|r 135 VMVIGSDTFSRIVD-WSDRS---TCVLFGDGAGALILEGVEVKG--SSMADTGILSTYLCSDGSYIDKLYVDG 201 (324)
Q Consensus 135 ~Lvv~~e~~S~~~d-~~d~~---~~~lfGDGAaA~ll~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (324)
||||+.|..|...= -.||. +-.+|.-|+||++|++..... ......+++-+|..++.+.+..++.+.
T Consensus 167 ALVvSTE~it~n~Y~G~~rsmLl~NcLFR~GgAAiLLSN~~~~r~rAky~L~h~VRth~ga~D~sy~cv~q~E 239 (290)
T pfam08392 167 ALVVSTENITPNWYAGNDRSMLLPNCLFRMGGAAILLSNKPADRRRAKYELVHTVRTHKGADDRAYRCVYQEE 239 (290)
T ss_pred EEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCHHCEEEEEE
T ss_conf 9999853045445358736650140113577147983058443544523742078742676731005254500
No 28
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.75 E-value=3.3e-17 Score=129.57 Aligned_cols=245 Identities=27% Similarity=0.359 Sum_probs=157.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCE----EEEECCCCCCC---------------------CCCCCCCHHHHHHCCCCCC
Q ss_conf 9999999999999740212354433----66501223345---------------------8985310011220268644
Q gi|254780497|r 52 TASLGEAAARDALHHAEMSVDDIDL----IIVATSTPDQT---------------------FPSTAVNIQNRLGMKRGFA 106 (324)
Q Consensus 52 ~~~la~~Aa~~al~~a~~~~~~Id~----ii~~s~~~~~~---------------------~p~~a~~i~~~LGl~~~~~ 106 (324)
..-+|++|+++||+++|++++++.- |+++++..++. .+..+++|...+|++ .++
T Consensus 11 vsl~al~aa~eAl~dAGl~~~~~~~~r~GV~~Gs~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~-Gp~ 89 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIH-GPA 89 (332)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCC
T ss_conf 9999999999999975999344578888999996883188898531232236864246655348999999996898-963
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCC-----------C------CC-CCCCCCCCCCCCCCCEEEEE
Q ss_conf 442101220034678889989641556531676302243-----------2------22-45663232345443123440
Q gi|254780497|r 107 FDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSR-----------I------VD-WSDRSTCVLFGDGAGALILE 168 (324)
Q Consensus 107 ~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~-----------~------~d-~~d~~~~~lfGDGAaA~ll~ 168 (324)
+-+..+|++++.||..|..+|+.|+.+.+++.++|..+. . .. |......+.+|+||++++|+
T Consensus 90 ~tv~taCaS~l~Ai~~A~~~i~~G~~d~aivgg~~~~~~~~~~~~~~~~~~~~~~~~~rpFd~~~~G~v~gEGa~~lvLe 169 (332)
T cd00825 90 YDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALVVE 169 (332)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHH
T ss_conf 03135416889999999999983899874620312117989999999727789898878887889972002654035540
Q ss_pred CCCCCCCCCC--CCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 2654465434--45410123203555556177548765444332001032024445577777778888987400100012
Q gi|254780497|r 169 GVEVKGSSMA--DTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENID 246 (324)
Q Consensus 169 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did 246 (324)
+.+....... ...+.+.....|+... .....+ .+...+.++++|++++++++|||
T Consensus 170 ~~~~A~~rg~~i~a~i~g~~~~~dg~~~---------------~~~~p~--------~~~~~~ai~~Al~~agi~p~~I~ 226 (332)
T cd00825 170 ELEHALARGAHIYAEIVGTAATIDGAGM---------------GAFAPS--------AEGLARAAKEALAVAGLTVWDID 226 (332)
T ss_pred HHHHHHHCCCCEEEEECCCEEECCCCCC---------------CCCCCC--------HHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 0888875289620331134587789878---------------887979--------99999999999998498820014
Q ss_pred CCCCCCCCHHHH-----HHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHH---HHHCCCCCC----------------
Q ss_conf 102444441589-----99999719787673365865193301269999999---998068899----------------
Q gi|254780497|r 247 WFVPHQANWRII-----NSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAV---AVKEGRVKK---------------- 302 (324)
Q Consensus 247 ~~~~Hq~~~~~~-----~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~---~~~~g~l~~---------------- 302 (324)
++-.|-.+.... +.+.+.++-..=.+-.+-..+||+.+++=.+.+.. +++.+.+.|
T Consensus 227 yI~ahgtGt~~~D~~E~~Al~~~fg~~~~~v~S~Ks~~GH~~~AsG~~~li~~~lal~~~~ipp~~n~~~~~~~~~~~~~ 306 (332)
T cd00825 227 YLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDEAGLNIVT 306 (332)
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 79917786855559999999998578998210574564455265699999999999863960899998999833256677
Q ss_pred ------CCEEEEEEECCCCCEEEE
Q ss_conf ------989999997145014568
Q gi|254780497|r 303 ------GDCLLLEAMGGGFTSGTV 320 (324)
Q Consensus 303 ------Gd~vll~~~G~G~s~~a~ 320 (324)
.++++.-+||-|=+-.++
T Consensus 307 ~~~~~~~~~~~~nsfGfGG~Na~v 330 (332)
T cd00825 307 ETTPRELRTALLNGFGLGGTNATL 330 (332)
T ss_pred CCCCCCCCEEEEECCCCCCEEEEE
T ss_conf 776899989999670268140688
No 29
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.73 E-value=7.1e-17 Score=127.44 Aligned_cols=99 Identities=23% Similarity=0.267 Sum_probs=87.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 9889999999999999974021235443366501223345898531001122026-864444210122003467888998
Q gi|254780497|r 48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADSY 126 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~l 126 (324)
.+.++.||+.++++++|++++++|++||.|+++++.+....+..+..+.-..|++ ..+++.|++.|+|++.|+..|...
T Consensus 18 ~~~~~~~L~~~ai~~al~~agl~~~~Id~vi~G~~~~~g~g~n~aR~~al~aGlp~~vp~~tV~~aCaSG~~Ai~~A~~~ 97 (386)
T cd00751 18 KDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQS 97 (386)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHH
T ss_conf 88989999999999999984989899998999950666656639999999769998886588842216879999999741
Q ss_pred HHHCCCCCCEEEEECCCCCC
Q ss_conf 96415565316763022432
Q gi|254780497|r 127 IRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 127 i~~g~~~~~Lvv~~e~~S~~ 146 (324)
|++|.++.+|+++.|.+|+.
T Consensus 98 I~sG~~dvvla~GvEsmS~~ 117 (386)
T cd00751 98 IAAGEADVVVAGGVESMSRA 117 (386)
T ss_pred HCCCCCCEEEEECCCCCCCC
T ss_conf 10799778887244535657
No 30
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.73 E-value=2.3e-16 Score=124.25 Aligned_cols=202 Identities=21% Similarity=0.200 Sum_probs=142.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 89889999999999999974021235443366501223345898531001122026864444210122003467888998
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSY 126 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~l 126 (324)
.++.+..||+.+|++++|+++|++|++||.|++++..+.......+..++..+|+++..++.++.+|+|++.++..|...
T Consensus 11 ~~~~s~~eL~~~a~~~Al~dagi~~~~ID~v~~g~~~~~~~~~~~~~~~a~~~G~~~~~~~~v~~~c~Sg~~ai~~Aa~~ 90 (375)
T cd00829 11 RSDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLLGKPATRVEAAGASGSAAVRAAAAA 90 (375)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCHHHHCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 99969999999999999998391989949999991287553476999999982999986588689886999999999999
Q ss_pred HHHCCCCCCEEEEECCCCCCCCCC----------C---------------------------------------------
Q ss_conf 964155653167630224322245----------6---------------------------------------------
Q gi|254780497|r 127 IRSGVVRRVMVIGSDTFSRIVDWS----------D--------------------------------------------- 151 (324)
Q Consensus 127 i~~g~~~~~Lvv~~e~~S~~~d~~----------d--------------------------------------------- 151 (324)
|++|..+.+|++++|.+|..-.+. +
T Consensus 91 I~~G~~~~vl~~G~Es~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g~~re~~~~~a~~~~~~A~ 170 (375)
T cd00829 91 IASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGTTREDLAKVAVKNHRNAA 170 (375)
T ss_pred HHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 97799998999987516778765554445677203332024466578999999999999979799999999999998644
Q ss_pred --CC-------------------------CCCCCCCCCCEEEEECCCCCCCCCCCCC--CEEEEEECCCCCCCCEEECCC
Q ss_conf --63-------------------------2323454431234402654465434454--101232035555561775487
Q gi|254780497|r 152 --RS-------------------------TCVLFGDGAGALILEGVEVKGSSMADTG--ILSTYLCSDGSYIDKLYVDGG 202 (324)
Q Consensus 152 --~~-------------------------~~~lfGDGAaA~ll~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 202 (324)
+. .+..+.|||+|+||.+.+..... .... +.......+..+ ..
T Consensus 171 ~np~A~~~~~~t~e~~~~~~~i~~Pl~~~~~~~~~DGAaa~vl~s~~~A~~~-~~~p~~i~g~~~~~~~~~-----~~-- 242 (375)
T cd00829 171 RNPYAQFRKPITVEDVLNSRMIADPLRLLDCCPVSDGAAAVVLASEERAREL-TDRPVWILGVGAASDTPS-----LS-- 242 (375)
T ss_pred CCCCCCCCCCCCHHHHHCCCCCCCCCCHHHCCCCCCCCEEEEEECHHHHHHC-CCCCEEEEEEEEEECCCC-----CC--
T ss_conf 2861202588589998234764466214315766664058999639999876-999379999999952654-----35--
Q ss_pred CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH
Q ss_conf 65444332001032024445577777778888987400100012102444441589999997197876
Q gi|254780497|r 203 PSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD 270 (324)
Q Consensus 203 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e 270 (324)
.. .. ..........++++|+++|++++|||.|=+|-.-....-...+.|||.++
T Consensus 243 --~~--~~----------~~~~~~~~~A~~~al~~aGl~~~DiD~~Ei~eaFa~~~l~~~e~lGl~~~ 296 (375)
T cd00829 243 --ER--DD----------FLSLDAARLAARRAYKMAGITPDDIDVAELYDCFTIAELLALEDLGFCEK 296 (375)
T ss_pred --CC--CC----------CCCCHHHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCCC
T ss_conf --67--85----------22232599999999998199978765642015766999999998099977
No 31
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.72 E-value=1.3e-15 Score=119.31 Aligned_cols=298 Identities=20% Similarity=0.269 Sum_probs=167.7
Q ss_pred CEEEEEEEEEECCCCEECHHHHHH-HHCCCHH--HHH--HCCCCCEEE---EE--CCC-----------CCHHHHHHHHH
Q ss_conf 226999999964984117889998-8099987--811--024751889---82--898-----------89999999999
Q gi|254780497|r 2 IRSTVRGIGLSLPRRVLSNSDLES-IVDTSDG--WIK--RRVGISRRH---IA--GKD-----------ETTASLGEAAA 60 (324)
Q Consensus 2 ~~~~I~~~g~ylP~~~v~~~el~~-~~~~~~~--~i~--~~~GI~~R~---~~--~~~-----------e~~~~la~~Aa 60 (324)
.+|.|+|+|...|.-. +.+++-+ ...-... .+. .......+. +. +++ ....-|+.+++
T Consensus 2 rRVvItG~g~v~P~g~-~~e~fw~~L~~G~s~i~~~~~~d~~~~~~~~~g~i~~f~~~~~i~~~~~r~~d~~~~~~l~aa 80 (411)
T PRK07314 2 RRVVVTGLGAVSPLGN-DVESTWKNLLAGKSGIGPITKFDTSDLAVKIAGEVKDFNPDDYMSRKEARRMDRFIQYGIAAA 80 (411)
T ss_pred CCEEEECCEEECCCCC-CHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHCCHHHHHHHHHH
T ss_conf 9699981678898989-999999999809983654786665468763667818989577589999985599999999999
Q ss_pred HHHHHHHCCCCCCCC----EEEEECCCC-----------------C----CCCCC-----CCCCHHHHHHCCCCCCCCCC
Q ss_conf 999974021235443----366501223-----------------3----45898-----53100112202686444421
Q gi|254780497|r 61 RDALHHAEMSVDDID----LIIVATSTP-----------------D----QTFPS-----TAVNIQNRLGMKRGFAFDMQ 110 (324)
Q Consensus 61 ~~al~~a~~~~~~Id----~ii~~s~~~-----------------~----~~~p~-----~a~~i~~~LGl~~~~~~di~ 110 (324)
++||+++|+++++++ .|+++|... . +..|. .+++|...+|++ .+++-++
T Consensus 81 ~~Al~dAGl~~~~~~~~r~gv~vGt~~g~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l~-Gp~~tv~ 159 (411)
T PRK07314 81 KQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLHEKGPRRVSPFFVPMAIINMAAGHVSIRYGAK-GPNHSIV 159 (411)
T ss_pred HHHHHHCCCCHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCC
T ss_conf 999997399946808655689981477625769999999984495545852025665028999999983999-9731111
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC-CCC---------------------CCCCCC-CCCCCCCCCCCEEEE
Q ss_conf 012200346788899896415565316763022-432---------------------224566-323234544312344
Q gi|254780497|r 111 AVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF-SRI---------------------VDWSDR-STCVLFGDGAGALIL 167 (324)
Q Consensus 111 ~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~-S~~---------------------~d~~d~-~~~~lfGDGAaA~ll 167 (324)
.+|+|++.||..|..+|++|..+.+||.++|.. ++. ..+.|. ...+++|+||+++||
T Consensus 160 ~aCsSsl~Al~~A~~~i~~G~~d~aivgg~~~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~adG~v~gEGa~~vvL 239 (411)
T PRK07314 160 TACATGAHAIGDAARLIQYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRDGFVMGEGAGILVL 239 (411)
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 40137999999999999859977654145245678899999999888740789987777732137997322561478852
Q ss_pred ECCCCCCCCCCC--CCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 026544654344--541012320355555617754876544433200103202444557777777888898740010001
Q gi|254780497|r 168 EGVEVKGSSMAD--TGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENI 245 (324)
Q Consensus 168 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~di 245 (324)
++.+........ ..+.+....+|+.. ... ...++ ....+.++++|+++|++++||
T Consensus 240 e~~~~A~~~g~~i~a~i~G~~~~~d~~~----------~~~-----p~~~~--------~g~~~a~~~al~~agi~~~~i 296 (411)
T PRK07314 240 EELEHAKARGAKIYAEVVGYGMTGDAYH----------MTA-----PAPDG--------EGAARAMVAALKDAGINPEDI 296 (411)
T ss_pred CCHHHHHHCCCCEEEEEEEEEECCCCCC----------CCC-----CCCCC--------HHHHHHHHHHHHHHCCCCCCE
T ss_conf 6599998779946899831376479988----------878-----89860--------567889999999858996332
Q ss_pred CCCCCCCCCHH-----HHHHHHHHCCCCHHHHH-H-HHHHHCCCHHHHHHHHHHH---HHHCCCCC--------------
Q ss_conf 21024444415-----89999997197876733-6-5865193301269999999---99806889--------------
Q gi|254780497|r 246 DWFVPHQANWR-----IINSIVDKMKIPFDKVI-V-TVDIHGNTSAASIPLALAV---AVKEGRVK-------------- 301 (324)
Q Consensus 246 d~~~~Hq~~~~-----~~~~~~~~lgl~~e~~~-~-~~~~~Gn~~sas~~~~L~~---~~~~g~l~-------------- 301 (324)
|++-.|-.+-. =.+.+.+.++=...++. . +=..+||+.+++=.+.+-. +++.+.+.
T Consensus 297 ~yIe~hgtgt~~~D~~E~~al~~~f~~~~~~~~i~S~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~p~~~~~~ 376 (411)
T PRK07314 297 DYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFTVLAIRDQVIPPTINLDNPDEECDL 376 (411)
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 17997368787779889999999865558898764803310336888999999999999855952898899999988984
Q ss_pred ----------CCCEEEEEEEC-CCCCEEEEEEEC
Q ss_conf ----------99899999971-450145687869
Q gi|254780497|r 302 ----------KGDCLLLEAMG-GGFTSGTVLLRW 324 (324)
Q Consensus 302 ----------~Gd~vll~~~G-~G~s~~a~llrw 324 (324)
+.++.+.-+|| +|.....++=||
T Consensus 377 ~~v~~~~~~~~~~~al~~sfGfGG~N~~~vl~~y 410 (411)
T PRK07314 377 DYVPNEARERKIDYALSNSFGFGGTNASLVFKRY 410 (411)
T ss_pred CCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEEC
T ss_conf 3288988678878999968358856689998404
No 32
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.69 E-value=7e-15 Score=114.73 Aligned_cols=295 Identities=17% Similarity=0.204 Sum_probs=170.6
Q ss_pred CCEEEEEEEEEECCCCEECHHHHHHHH--CCCH----HH---------H----HHCCCCCEEEEECCC---------CCH
Q ss_conf 922699999996498411788999880--9998----78---------1----102475188982898---------899
Q gi|254780497|r 1 MIRSTVRGIGLSLPRRVLSNSDLESIV--DTSD----GW---------I----KRRVGISRRHIAGKD---------ETT 52 (324)
Q Consensus 1 M~~~~I~~~g~ylP~~~v~~~el~~~~--~~~~----~~---------i----~~~~GI~~R~~~~~~---------e~~ 52 (324)
|++|.|+|+|...|--. +.+++-+.+ +.+. .+ . ....|-+...+..++ ...
T Consensus 6 m~rVvITGiG~vtp~G~-~~~e~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 84 (415)
T PRK07103 6 MDEVVVTGVGVVSAIGQ-GRQPFAAALLAGRHAFGVMRRPGRQLPDDPGAGPAPAFFGAEIDSLALPPMLDAHRRRASYS 84 (415)
T ss_pred CCEEEEECCEEECCCCC-CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHH
T ss_conf 97199988863788838-99999999975998656566566646687433344565564356666300288998755299
Q ss_pred HHHHHHHHHHHHHHHCCCC---CCCCEEEEECCCC---------------CCCCC---------CCCCCHHHHHHCCCCC
Q ss_conf 9999999999997402123---5443366501223---------------34589---------8531001122026864
Q gi|254780497|r 53 ASLGEAAARDALHHAEMSV---DDIDLIIVATSTP---------------DQTFP---------STAVNIQNRLGMKRGF 105 (324)
Q Consensus 53 ~~la~~Aa~~al~~a~~~~---~~Id~ii~~s~~~---------------~~~~p---------~~a~~i~~~LGl~~~~ 105 (324)
..++..|++++++++++++ ..+.+++-++... .+.-| ..+.+|+..+|++ .+
T Consensus 85 ~~~a~~a~~~Al~dagl~~~~~~r~G~~vg~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~gl~-Gp 163 (415)
T PRK07103 85 AQAALAAVREAWDDAALGDVDPLRIGLVVGGSNVQQRELALVHDAYRERPAFLRPSYGLSFMDSDLCGLCTEQFGIR-GV 163 (415)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-CC
T ss_conf 99999999999996799977877528999967465899999999855699813765888751058999999996899-97
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC-CC-----------------------CCCCCCC-CCCCCCCC
Q ss_conf 44421012200346788899896415565316763022-43-----------------------2224566-32323454
Q gi|254780497|r 106 AFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF-SR-----------------------IVDWSDR-STCVLFGD 160 (324)
Q Consensus 106 ~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~-S~-----------------------~~d~~d~-~~~~lfGD 160 (324)
++.++++|++++.||..|.++|+.|.++.+++++++.. +. ...+.|+ ...+++|+
T Consensus 164 ~~tv~tACaSg~~Ai~~A~~~Ir~G~~D~ai~gG~~~~ls~~~~~~f~~lgals~~~~~~~P~~~~rPFD~~rdG~v~GE 243 (415)
T PRK07103 164 AFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRDGFIYGE 243 (415)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECC
T ss_conf 20101532159999999999998399998884263222056889999986776314467898766660105899643527
Q ss_pred CCCEEEEECCCCCCCCCCC--CCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 4312344026544654344--54101232035555561775487654443320010320244455777777788889874
Q gi|254780497|r 161 GAGALILEGVEVKGSSMAD--TGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDST 238 (324)
Q Consensus 161 GAaA~ll~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~ 238 (324)
||+++|||+.+........ ..+.+.-..+|+.. .. ..+ .......++++|+++
T Consensus 244 Ga~~lvLE~~e~A~~RGa~i~a~i~G~g~~~Da~~----------~~-------~p~--------~~g~~~am~~Al~~A 298 (415)
T PRK07103 244 ACGAIVVERAERARRRGVRPYAKLLGWSIRLDATR----------GP-------APS--------LDGEMAVIRGALRRA 298 (415)
T ss_pred CEEEEEEHHHHHHHHCCCEEEEEEEEEEECCCCCC----------CC-------CCC--------HHHHHHHHHHHHHHC
T ss_conf 64776331166687679958899831045147878----------88-------997--------799999999999982
Q ss_pred HCCCCCCCCCCCCCCCHHH-----HHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHH---HHHCCCCCC--------
Q ss_conf 0010001210244444158-----999999719787673365865193301269999999---998068899--------
Q gi|254780497|r 239 HLTIENIDWFVPHQANWRI-----INSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAV---AVKEGRVKK-------- 302 (324)
Q Consensus 239 gl~~~did~~~~Hq~~~~~-----~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~---~~~~g~l~~-------- 302 (324)
+++++|||++..|-.+-.. .+.+.+.++=. -.+.++=..+||+..++=.+.+-. +++++.+.|
T Consensus 299 gl~~~~IdyI~aHgTgT~~~D~~E~~Al~~~fg~~-~~v~S~Ks~~GH~lgAaGa~e~i~~~lal~~~~ipPt~n~~~p~ 377 (415)
T PRK07103 299 GLGPADIDYVNPHGTGSVLGDATELDALRASGLAH-ARINTTKSLVGHGLSAAGIVELIATLLQMRAGRLHPSRNLDEPI 377 (415)
T ss_pred CCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCC-CCEECCCHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 97812307798148767676999999999970899-86758644320357999999999999998439508999989989
Q ss_pred ---------------CCEEEEEEECCCCCEEEEEEE
Q ss_conf ---------------989999997145014568786
Q gi|254780497|r 303 ---------------GDCLLLEAMGGGFTSGTVLLR 323 (324)
Q Consensus 303 ---------------Gd~vll~~~G~G~s~~a~llr 323 (324)
-+.+|--+||=|=+-.+++||
T Consensus 378 d~~l~~v~~~~~~~~~~~~l~nsfgFGG~Na~lvl~ 413 (415)
T PRK07103 378 DPSFDWVRSTAGSHDIHRALSLSIGFGGINTALCLE 413 (415)
T ss_pred CCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEE
T ss_conf 976586788773488889999602587417899997
No 33
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=99.69 E-value=2e-14 Score=111.89 Aligned_cols=288 Identities=15% Similarity=0.124 Sum_probs=169.9
Q ss_pred CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf 92269999999649841178899988099987811024751889828988999999999999997402123544336650
Q gi|254780497|r 1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVA 80 (324)
Q Consensus 1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~ 80 (324)
|.+|.|.|+|.. |-.+ ..++.+..+|+.+|+++||+++|++++|||.++++
T Consensus 1 Mr~V~IvGvG~T-~f~k----------------------------~~~~~~~~~l~~eA~~~AL~DAGl~~~dIDg~v~~ 51 (415)
T PRK06365 1 MRDVYMVAGGVT-KFVK----------------------------ASPNMDFRLRVKKAFDYAMNDAGLTLADIDGSVAS 51 (415)
T ss_pred CCCEEEEEEECC-CCCC----------------------------CCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEE
T ss_conf 984899984236-4567----------------------------89998899999999999999759998996988898
Q ss_pred CCCCCCCCC--CCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC----------
Q ss_conf 122334589--85310011220268644442101220034678889989641556531676302243222----------
Q gi|254780497|r 81 TSTPDQTFP--STAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVD---------- 148 (324)
Q Consensus 81 s~~~~~~~p--~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d---------- 148 (324)
.. ++.... .....+++.||+.+.++..+.++|+++..+++.|...|++|.++.+||++.|.++....
T Consensus 52 ~~-~~~~~~~~~~g~~~~~~lGl~~~p~~~ve~~casg~~a~~~A~~~I~sG~~d~vlv~G~ek~s~~~~~~~~~~~~~~ 130 (415)
T PRK06365 52 YF-SDHFQRQLMAGIMVQDYLGLVPKPSKRIEGGGATGGLAFQAGYEEIASGRMDVVAVYGFETMSHVNTWKGNEFIALA 130 (415)
T ss_pred EC-CCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHCC
T ss_conf 41-78664210055899997188886425773772899999999999997087878999741145678866653111025
Q ss_pred ----CCCCC--------------------------------------------------------C-----------CCC
Q ss_conf ----45663--------------------------------------------------------2-----------323
Q gi|254780497|r 149 ----WSDRS--------------------------------------------------------T-----------CVL 157 (324)
Q Consensus 149 ----~~d~~--------------------------------------------------------~-----------~~l 157 (324)
|+.+. + +..
T Consensus 131 ~d~~~e~p~g~~~~~~~Al~a~rym~~yG~t~e~lA~Vavk~r~~A~~NP~A~~~~~iTvedvl~s~~Ia~PL~lldcc~ 210 (415)
T PRK06365 131 SDTNFDYPIGGFYTGYYAMMAVRHMYEFGTTVEQMAKVSVKNHGNAIHNPYAQSPMKLTVEDVRKAPMVSYPLTRLDVCA 210 (415)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHCCCCCCCCCHHHCCCC
T ss_conf 66553454555448899999999999869889999999999877552593764888899899831884436720212688
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCC--CEEEEEECCCCCC-CCEEECCC--CCCC-CCCCCHHHCCHHHHHHHHHHHHHHH
Q ss_conf 454431234402654465434454--1012320355555-61775487--6544-4332001032024445577777778
Q gi|254780497|r 158 FGDGAGALILEGVEVKGSSMADTG--ILSTYLCSDGSYI-DKLYVDGG--PSTS-RTVGCIRMEGKAVFKYAVEKAVELI 231 (324)
Q Consensus 158 fGDGAaA~ll~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~--~~~~-~~~~~~~~~g~~~~~~~~~~~~~~i 231 (324)
.+|||+|+||.+.+.... ..+.. +...-..++..+. +....+.. +... .....+.. ..+. ..+......
T Consensus 211 ~sDGAaAvVl~see~Ar~-~~~~pV~I~g~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~Aa 285 (415)
T PRK06365 211 MSDGAAVAILASEDKAFE-ITDHPVLIKAIGTGTDTMRLADRPFGEVPLLPNENPSDYKNLKY--PGVH--SFRAGRMAA 285 (415)
T ss_pred CCCCEEEEEEECHHHHHH-CCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCC--CCCC--CHHHHHHHH
T ss_conf 888649999945898865-57997799999971254200345444454444567201102345--5410--027999999
Q ss_pred HHHHHHHHCCC--CCCCCCCCCCCCHHHHHHHHHHCCCCHH----HHH------------HH----HHHHCCCHHHHHHH
Q ss_conf 88898740010--0012102444441589999997197876----733------------65----86519330126999
Q gi|254780497|r 232 EKVFDSTHLTI--ENIDWFVPHQANWRIINSIVDKMKIPFD----KVI------------VT----VDIHGNTSAASIPL 289 (324)
Q Consensus 232 ~~~L~~~gl~~--~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~~------------~~----~~~~Gn~~sas~~~ 289 (324)
+++++++|+++ +|||.+-+|-.--..--...|.||+-+. +++ .| +--.||...++-+.
T Consensus 286 ~~Ay~~AGi~~p~~DiDv~ev~D~Ft~~el~~lE~lGfc~~Geg~~~v~~G~~~~~G~lPvN~sGGlls~Ghp~GatG~~ 365 (415)
T PRK06365 286 KEAYERANITDPLNDLDLIELHDAYTSSEIQTYEDLGLCKYGEGGQFIDEGKPELDGKIPVNPSGGLLAAGHPVGATGIM 365 (415)
T ss_pred HHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHH
T ss_conf 99999749999614587799845762999999998499889838999977996689971267885233078656513999
Q ss_pred HHHHHHHC--C-----------CCCCCCEEEEEEEC-CCCCEEEEEEE
Q ss_conf 99999980--6-----------88999899999971-45014568786
Q gi|254780497|r 290 ALAVAVKE--G-----------RVKKGDCLLLEAMG-GGFTSGTVLLR 323 (324)
Q Consensus 290 ~L~~~~~~--g-----------~l~~Gd~vll~~~G-~G~s~~a~llr 323 (324)
.+.++.++ | +++.-...|.-+.| .|-+....+||
T Consensus 366 q~vE~~~QLrG~a~~r~~~~~~QV~~a~~al~~~~GG~~~~~~v~il~ 413 (415)
T PRK06365 366 QAVFMFWQLQHTIKKHFHDDYLQVPNAKRGLIHSHAGTGTYVTVTIME 413 (415)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEE
T ss_conf 999999996175023677754568985689883577554017999993
No 34
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=99.69 E-value=7.6e-15 Score=114.49 Aligned_cols=270 Identities=20% Similarity=0.230 Sum_probs=155.0
Q ss_pred CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf 92269999999649841178899988099987811024751889828988999999999999997402123544336650
Q gi|254780497|r 1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVA 80 (324)
Q Consensus 1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~ 80 (324)
|++|.|.|++- .|-.+ .++.+..+|+++|+++||+++|++|+|||-|+++
T Consensus 1 M~~vaIVG~g~-Tp~gr-----------------------------~~~~s~~~L~~~A~~~Al~dAgl~~~dID~v~~G 50 (389)
T PRK07516 1 MMTASIVGWAH-TPFGK-----------------------------LDAETLESLIVRVAREALADAGIAAGDVDGIFLG 50 (389)
T ss_pred CCCEEEEEEEE-CCCCC-----------------------------CCCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEE
T ss_conf 98389998203-35500-----------------------------6998999999999999999969098993999998
Q ss_pred CCCCCCCCCC--CCCCHH-HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC---------
Q ss_conf 1223345898--531001-1220268644442101220034678889989641556531676302243222---------
Q gi|254780497|r 81 TSTPDQTFPS--TAVNIQ-NRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVD--------- 148 (324)
Q Consensus 81 s~~~~~~~p~--~a~~i~-~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d--------- 148 (324)
+..... .|. .+..+. ...++...++..++.+|+|++.++..|...|++|.++.+|+++.|.+|+.-.
T Consensus 51 ~~~~g~-~~~~~~~~~~~~~~~~l~~~p~~~v~~~caSG~~ai~~Aa~~I~sG~~dvvl~~G~e~ms~~p~~~~~~~~~~ 129 (389)
T PRK07516 51 HFNAGF-SPQDFTASLVLQADPALRFKPATRVENACATGSAAVYAAIDAIESGRARIVLVVGAEKMTATPGAEVGRILLG 129 (389)
T ss_pred ECCCCC-CCCHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHCCC
T ss_conf 247444-6432999999973675568755998787679999999999999759888999998710467982023122036
Q ss_pred --CCCCC-------------------------------------------------------------------------
Q ss_conf --45663-------------------------------------------------------------------------
Q gi|254780497|r 149 --WSDRS------------------------------------------------------------------------- 153 (324)
Q Consensus 149 --~~d~~------------------------------------------------------------------------- 153 (324)
+....
T Consensus 130 ~~~~~~~~~~~~~~~~~~a~~a~~~~~~~g~~~e~~a~va~~~~~~a~~np~A~~~~~~~~e~~~~~~~~~p~i~~pl~~ 209 (389)
T PRK07516 130 ASYRKEEGDTPGGFAGVFGRIAQAYFQRYGDQSDALAMIAAKNHANGVANPYAQMRKDLGFEFCNTVSEKNPFVAGPLRR 209 (389)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCEECCCCHH
T ss_conf 64454334455548999999999999997878999999999976513248753355788841344533357721366333
Q ss_pred -CCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHH
Q ss_conf -2323454431234402654465434454101232035555561775487654443320010320244455777777788
Q gi|254780497|r 154 -TCVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIE 232 (324)
Q Consensus 154 -~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~ 232 (324)
.+....|||+|+||.+.+..........+......+ +.. .+..+... ........++
T Consensus 210 ~d~s~~~DGAaAvvl~s~e~A~~l~~~v~i~~~a~~~-----~~~---------------~~~~~d~~--~~~gp~~A~~ 267 (389)
T PRK07516 210 TDCSLVSDGAAALVLADAETARALQRAVRFRARAHVN-----DFL---------------PMSRRDPL--AFEGPRRAWQ 267 (389)
T ss_pred HCCCCCCCCEEEEEECCHHHHHHCCCCCEEEEEEEEE-----CCC---------------CCCCCCCC--CCCCHHHHHH
T ss_conf 2288777840489982599997568981899999982-----464---------------55657842--3424899999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH----HHHH------------H----HHHHCCCHHHHHHHHHH
Q ss_conf 88987400100012102444441589999997197876----7336------------5----86519330126999999
Q gi|254780497|r 233 KVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD----KVIV------------T----VDIHGNTSAASIPLALA 292 (324)
Q Consensus 233 ~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~~~------------~----~~~~Gn~~sas~~~~L~ 292 (324)
++|+++|++++|||.+-+|-+--...-.+.|.||+-++ +++. | .--+||-..++=...+.
T Consensus 268 ~al~~AGl~~~DiD~~Ei~daFa~~~l~~~E~lGl~~~Ge~~~~~~~g~~~~~G~~pvN~~GG~ls~Ghp~gatG~~~~~ 347 (389)
T PRK07516 268 RALEQAGVTLDDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGRLPVNPSGGLKAKGHPIGATGVSMHV 347 (389)
T ss_pred HHHHHCCCCHHHCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCEECCCHHHHHCCCCCCHHHHHHHH
T ss_conf 99998499888824454334337999999998499977725778765886679984371784187669810136999999
Q ss_pred ---HHHHC----CCCCCCCEEEEEEECCC-CCEEEEEEE
Q ss_conf ---99980----68899989999997145-014568786
Q gi|254780497|r 293 ---VAVKE----GRVKKGDCLLLEAMGGG-FTSGTVLLR 323 (324)
Q Consensus 293 ---~~~~~----g~l~~Gd~vll~~~G~G-~s~~a~llr 323 (324)
+-++- .+++.-+..+..+.|.. .+...++|+
T Consensus 348 e~~~QLrg~ag~~QV~~a~~~l~~~~GG~~~~~~~~il~ 386 (389)
T PRK07516 348 LAAMQLTGEAGGMQIPGAKLAGVFNMGGAAVANYVSILE 386 (389)
T ss_pred HHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHEEEEEEE
T ss_conf 999996235367778987789995778676716899988
No 35
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.68 E-value=1.2e-14 Score=113.23 Aligned_cols=288 Identities=22% Similarity=0.319 Sum_probs=173.8
Q ss_pred CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEE-EE-----------CCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 92269999999649841178899988099987811024751889-82-----------8988999999999999997402
Q gi|254780497|r 1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRH-IA-----------GKDETTASLGEAAARDALHHAE 68 (324)
Q Consensus 1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~-~~-----------~~~e~~~~la~~Aa~~al~~a~ 68 (324)
||+|.|+|+|..-|--- ..+.|.... .-++||.... +. .......++...|+.+|+++++
T Consensus 1 M~RVVITGiG~vSplG~-~~e~w~~L~-------~G~sgI~~~~~f~~~~~~~~~~~~~~~~~~~~l~~~a~~~Al~dAg 72 (379)
T PRK05952 1 MMKVVVTGIGLVSALGS-LEQSWQRLL-------QGKSGIKLHQPFPELPPLPLGLIGSQPISLEDLTQTTVTAALKDAG 72 (379)
T ss_pred CCEEEEECCEEECCCCC-HHHHHHHHH-------CCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 98799945110688888-599999997-------6898825677777777614200277856899999999999999779
Q ss_pred CCCCCCCE-EEEECCCCC----------C----------------CCCC-CCCCHHHHHHCCCCCCCCCCCCCCCHHHHH
Q ss_conf 12354433-665012233----------4----------------5898-531001122026864444210122003467
Q gi|254780497|r 69 MSVDDIDL-IIVATSTPD----------Q----------------TFPS-TAVNIQNRLGMKRGFAFDMQAVCSGFVYAV 120 (324)
Q Consensus 69 ~~~~~Id~-ii~~s~~~~----------~----------------~~p~-~a~~i~~~LGl~~~~~~di~~~C~~~~~al 120 (324)
+++...+. +++++.... + .+|. .+..++..+|++ .+++-++.+|++++.||
T Consensus 73 l~~~~~~~gv~~Gt~~g~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~ia~~~g~~-G~~~~~~~aCaS~~~Ai 151 (379)
T PRK05952 73 LTPPLTDCGVVIGSSRGFQGQWEKLARQIYVGDQSGDEAEENWLDTLPHQAAIATARQIGAQ-GPVLAPMAACATGIWAI 151 (379)
T ss_pred CCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC-CCEECCCCHHHHHHHHH
T ss_conf 99975465899996752676899999875204788866721699985339999999983999-96204012747899999
Q ss_pred HHHHHHHHHCCCCCCEEEEECC-CCCC---------------CCCCC-CCCCCCCCCCCCEEEEECCCCCCCCCCC--CC
Q ss_conf 8889989641556531676302-2432---------------22456-6323234544312344026544654344--54
Q gi|254780497|r 121 TTADSYIRSGVVRRVMVIGSDT-FSRI---------------VDWSD-RSTCVLFGDGAGALILEGVEVKGSSMAD--TG 181 (324)
Q Consensus 121 ~~A~~li~~g~~~~~Lvv~~e~-~S~~---------------~d~~d-~~~~~lfGDGAaA~ll~~~~~~~~~~~~--~~ 181 (324)
..|.++|++|+.+.+++.++|. .++. ..+.| ....+++|+||++++||+.+........ ..
T Consensus 152 ~~A~~~I~~G~~d~~i~gg~~~~~~~~~~~~f~~~~~ls~~~~rPFd~~r~G~v~gEGa~~lvLE~~~~A~~rga~iya~ 231 (379)
T PRK05952 152 AQGAELIQTGQCQRVIAGAVESPITPLTLAGFQKMGALAKTGAYPFDRQREGLVLGEGGAILVLESEELAQKRGAKIYGQ 231 (379)
T ss_pred HHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCHHHHHHCCCCEEEE
T ss_conf 99999998399887986787652482768999865783446767454689960258750467645599998789956899
Q ss_pred CEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH----
Q ss_conf 1012320355555617754876544433200103202444557777777888898740010001210244444158----
Q gi|254780497|r 182 ILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRI---- 257 (324)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~---- 257 (324)
+...-...|+... .....++ ....+.++++|++++++++||||+..|-.+-..
T Consensus 232 i~g~~~~~d~~~~---------------~~~~~~g--------~~~~~am~~al~~agi~~~~Idyi~aHgtgT~~~D~~ 288 (379)
T PRK05952 232 ILGFGLTCDAYHM---------------SAPEPSG--------KSAILAIQQCLARSGLTPEDIDYIHAHGTATRLNDQR 288 (379)
T ss_pred EECCEECCCCCCC---------------CCCCCCH--------HHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHH
T ss_conf 9352553689888---------------7889898--------9999999999998499833352899467878776999
Q ss_pred -HHHHHHHCCCCHHHH-HH-HHHHHCCCHHHHHHHHHHH---HHHCCCCC---------------------CCCEEEEEE
Q ss_conf -999999719787673-36-5865193301269999999---99806889---------------------998999999
Q gi|254780497|r 258 -INSIVDKMKIPFDKV-IV-TVDIHGNTSAASIPLALAV---AVKEGRVK---------------------KGDCLLLEA 310 (324)
Q Consensus 258 -~~~~~~~lgl~~e~~-~~-~~~~~Gn~~sas~~~~L~~---~~~~g~l~---------------------~Gd~vll~~ 310 (324)
.+.+.+.++ ++. +. +=..+||+..++=.+.+.. +++++.+. +-+++|--+
T Consensus 289 E~~ai~~vfg---~~~~v~s~Ks~~GH~~~aaG~~e~~~~~l~l~~~~ippt~n~~~p~~~l~~v~~~~~~~~~~aL~ns 365 (379)
T PRK05952 289 EANLIQTLFP---HRVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEFDLNFVRQARQSPLKNVLCLS 365 (379)
T ss_pred HHHHHHHHHC---CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 9999999718---7788778743324532777999999999999539718988999999899877876337888999962
Q ss_pred ECCCCCEEEEEEE
Q ss_conf 7145014568786
Q gi|254780497|r 311 MGGGFTSGTVLLR 323 (324)
Q Consensus 311 ~G~G~s~~a~llr 323 (324)
||=|=+-.++++|
T Consensus 366 fgfGG~Na~lvl~ 378 (379)
T PRK05952 366 FGFGGQNAAIALG 378 (379)
T ss_pred ECCCCEEEEEEEE
T ss_conf 2587368999996
No 36
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.68 E-value=3.3e-15 Score=116.78 Aligned_cols=273 Identities=22% Similarity=0.313 Sum_probs=158.2
Q ss_pred CEEEEEEEEEECCCCEECHHHHHHHH-CCCHHHHHH-----CCCCCEEEEE--C---------CC-----CCHHHHHHHH
Q ss_conf 22699999996498411788999880-999878110-----2475188982--8---------98-----8999999999
Q gi|254780497|r 2 IRSTVRGIGLSLPRRVLSNSDLESIV-DTSDGWIKR-----RVGISRRHIA--G---------KD-----ETTASLGEAA 59 (324)
Q Consensus 2 ~~~~I~~~g~ylP~~~v~~~el~~~~-~~~~~~i~~-----~~GI~~R~~~--~---------~~-----e~~~~la~~A 59 (324)
++|.|+|+|+.+|.-. +.+++-+.+ .-... |.. ..+...+.-. + +. ....-|+.++
T Consensus 1 ~rIaItG~g~~~P~g~-~~~~fw~~L~~g~s~-i~~~~~~~~~~~~~~~~g~i~~~~~~~~i~~~~~~~~dp~~rl~l~a 78 (406)
T cd00834 1 RRVVITGLGAVTPLGN-GVEEFWEALLAGRSG-IRPITRFDASGFPSRIAGEVPDFDPEDYLDRKELRRMDRFAQFALAA 78 (406)
T ss_pred CEEEEEECEEECCCCC-CHHHHHHHHHCCCCE-EECCCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHCCHHHHHHHHH
T ss_conf 9099995778897979-999999999749987-74488333425888553665888801158999998559999999999
Q ss_pred HHHHHHHHCCCCCCCC----EEEEECCCCC---------------------CCCC-----CCCCCHHHHHHCCCCCCCCC
Q ss_conf 9999974021235443----3665012233---------------------4589-----85310011220268644442
Q gi|254780497|r 60 ARDALHHAEMSVDDID----LIIVATSTPD---------------------QTFP-----STAVNIQNRLGMKRGFAFDM 109 (324)
Q Consensus 60 a~~al~~a~~~~~~Id----~ii~~s~~~~---------------------~~~p-----~~a~~i~~~LGl~~~~~~di 109 (324)
+.+||+++|+++++++ -|+++++.++ +..| ..+.+|...+|++ .+++.+
T Consensus 79 a~~Al~dAgl~~~~~~~~~~gV~vGs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~-Gp~~tv 157 (406)
T cd00834 79 AEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLR-GPNYTV 157 (406)
T ss_pred HHHHHHHCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHCCC-CCCEEE
T ss_conf 9999997599823448664479994377737779999999985586656811210113128999999984999-974203
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCC-CC----------C-----------CCCC-CCCCCCCCCCCCEEE
Q ss_conf 10122003467888998964155653167630224-32----------2-----------2456-632323454431234
Q gi|254780497|r 110 QAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFS-RI----------V-----------DWSD-RSTCVLFGDGAGALI 166 (324)
Q Consensus 110 ~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S-~~----------~-----------d~~d-~~~~~lfGDGAaA~l 166 (324)
..+|+|++.||..|+.+|++|+++.+||.++|... +. + .+.| ....+.+|+|+++++
T Consensus 158 ~taCsSsl~Al~~A~~~L~~G~~d~aivgg~~~~~~~~~~~~f~~~~~Ls~~~~~p~~~~rpFD~~adG~v~gEGa~~~v 237 (406)
T cd00834 158 STACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDRDGFVLGEGAGVLV 237 (406)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCEEEEE
T ss_conf 34416767889999999977954202110024127868999999888873389987666565556788400128655885
Q ss_pred EECCCCCCCCCC--CCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 402654465434--454101232035555561775487654443320010320244455777777788889874001000
Q gi|254780497|r 167 LEGVEVKGSSMA--DTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIEN 244 (324)
Q Consensus 167 l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~d 244 (324)
|++.+....... ...+.+....+|+... .....++ ....+.++++|+++|++++|
T Consensus 238 L~~~~~A~~~g~~i~a~I~g~~~~~dg~~~---------------~~~~p~~--------~~~~~~i~~al~~agi~~~~ 294 (406)
T cd00834 238 LESLEHAKARGAKIYAEILGYGASSDAYHI---------------TAPDPDG--------EGAARAMRAALADAGLSPED 294 (406)
T ss_pred CCCHHHHHHCCCCEEEEEEEEEEECCCCCC---------------CCCCCCH--------HHHHHHHHHHHHHHCCCCCC
T ss_conf 145999986799168999889993799888---------------8889898--------99999999999985899744
Q ss_pred CCCCCCCCCCHHH-----HHHHHHHCCCCHHHHH--HHHHHHCCCHHHHHHHHHHH---HHHCCCC
Q ss_conf 1210244444158-----9999997197876733--65865193301269999999---9980688
Q gi|254780497|r 245 IDWFVPHQANWRI-----INSIVDKMKIPFDKVI--VTVDIHGNTSAASIPLALAV---AVKEGRV 300 (324)
Q Consensus 245 id~~~~Hq~~~~~-----~~~~~~~lgl~~e~~~--~~~~~~Gn~~sas~~~~L~~---~~~~g~l 300 (324)
||++-.|-.+-.. .+.+.+.++=..++.+ .+=..+||+.+++=++.|-. +++++.+
T Consensus 295 I~yIe~HgtGt~~gD~~E~~ai~~~f~~~~~~~~i~s~K~~iGH~~~asG~~~li~~~~~l~~~~i 360 (406)
T cd00834 295 IDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVL 360 (406)
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEECCHHHHCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 528997048786779999999999855678986688821100118899999999999999855965
No 37
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.68 E-value=7.9e-15 Score=114.39 Aligned_cols=255 Identities=18% Similarity=0.227 Sum_probs=155.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 98899999999999999740212354433665012233458985310011220268644442101220034678889989
Q gi|254780497|r 48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYI 127 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li 127 (324)
++.+..+|+.+|+++||+++|++|+|||.+++++.......-..+..+++.+|+.....+.++.+|+++..++..|...|
T Consensus 17 ~~~s~~eL~~eA~~~Al~dAgl~~~dVD~v~~G~~~~~g~~~~~~~~~a~~~Gl~~~~~~~v~~~caSG~~av~~A~~~I 96 (385)
T PRK12578 17 DDVSIQELAWESIKEALEDAGITQKDVDLVVIGSTAYRGVELYPAPPVSEYSGLTGKVPLRVEAACATGSAAAFTAYTSI 96 (385)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHH
T ss_conf 99799999999999999984929899599999456755522362899999759989886688166778999999999999
Q ss_pred HHCCCCCCEEEEECCCCCCC------------C--CCCCC----------------------------------------
Q ss_conf 64155653167630224322------------2--45663----------------------------------------
Q gi|254780497|r 128 RSGVVRRVMVIGSDTFSRIV------------D--WSDRS---------------------------------------- 153 (324)
Q Consensus 128 ~~g~~~~~Lvv~~e~~S~~~------------d--~~d~~---------------------------------------- 153 (324)
++|.++.+|+++.|.+|+.- + |+.+.
T Consensus 97 ~sG~~dvvl~~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~~al~a~~ym~~yg~~~e~la~vav~~~~~A~~ 176 (385)
T PRK12578 97 ASGLADIAMAVGVDKMTEVDTSTSLAIGGRGGNYQWEFHMYGTTFPTYYALYATRHMAVFGTTEEQMALVSVKAHKYASM 176 (385)
T ss_pred HHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
T ss_conf 83859999994552057788643201145556532000234665279999999999999696999999999984487656
Q ss_pred ----------------------------CCCCCCCCCCEEEEECCCCCCCCCCCCC--CEEEEEECCCCCCCCEEECCCC
Q ss_conf ----------------------------2323454431234402654465434454--1012320355555617754876
Q gi|254780497|r 154 ----------------------------TCVLFGDGAGALILEGVEVKGSSMADTG--ILSTYLCSDGSYIDKLYVDGGP 203 (324)
Q Consensus 154 ----------------------------~~~lfGDGAaA~ll~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 203 (324)
.+....|||+|+||.+.+.......+.. +...-..++..+ ...
T Consensus 177 np~A~~~~~~t~edvl~s~~i~~Pl~~~dc~~~sDGAaAvvl~s~e~ar~lg~~~pv~I~g~g~~~~~~~-----~~~-- 249 (385)
T PRK12578 177 NPKAHFQKPVTVEDVLKSRVISWPIKLLDSSPISDGSATAIFASEEKVRELKIDTPVWIDGIGYASDTSY-----IAR-- 249 (385)
T ss_pred CCCCCCCCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCEEEEECCHHHHHHCCCCCCEEEEEEEECCCCCC-----CCC--
T ss_conf 9632146877888973157655774276404667984679971699998549998679998985256644-----223--
Q ss_pred CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH----H--------
Q ss_conf 5444332001032024445577777778888987400100012102444441589999997197876----7--------
Q gi|254780497|r 204 STSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD----K-------- 271 (324)
Q Consensus 204 ~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e----~-------- 271 (324)
. . ... .........+++++++|++++|||.+-+|-.-...--...|.||+-+. +
T Consensus 250 -~-~--~~~----------~~~~~~~A~~~a~~~AGl~~~DiDv~ei~D~Ft~~~l~~~E~lG~~~~Ge~~~~~~~g~~~ 315 (385)
T PRK12578 250 -R-G--EWV----------GLKATRLAAEMAYKMAKISPNDIEYATVHDCFTIAEIMAYEDLGFVEKGKGGKLLEEGQTE 315 (385)
T ss_pred -C-C--CCC----------CCHHHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCC
T ss_conf -5-6--544----------5638999999999871998665866520354278899999985999888379998678745
Q ss_pred ----HHHH----HHHHCCCHHHHHHHHHHHHHHC-------CCCCCCC-EEEEEEEC-CCCCEEEEEEE
Q ss_conf ----3365----8651933012699999999980-------6889998-99999971-45014568786
Q gi|254780497|r 272 ----VIVT----VDIHGNTSAASIPLALAVAVKE-------GRVKKGD-CLLLEAMG-GGFTSGTVLLR 323 (324)
Q Consensus 272 ----~~~~----~~~~Gn~~sas~~~~L~~~~~~-------g~l~~Gd-~vll~~~G-~G~s~~a~llr 323 (324)
.+.| +--+||-..++-...+.++..+ .+++... ..|.-+.| .|-....++||
T Consensus 316 ~~G~~pvN~~GG~ls~Ghp~gatG~~~v~E~v~QLrG~ag~~Qv~~~~~~al~~~~GG~~~~~~v~vL~ 384 (385)
T PRK12578 316 KGGKVAVNLFGGLKAKGHPLGATGLSMIYEITKQLREEAGPLQQPLKNYVALTHNVGGTGHYAYVMILR 384 (385)
T ss_pred CCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHEEEEEEE
T ss_conf 699851528830764798455289999999999960243566478876689995367620306999995
No 38
>PRK06059 lipid-transfer protein; Provisional
Probab=99.68 E-value=8e-15 Score=114.36 Aligned_cols=263 Identities=17% Similarity=0.229 Sum_probs=156.3
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC--CCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 889999999999999974021235443366501223345898--531001122026864444210122003467888998
Q gi|254780497|r 49 DETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPS--TAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSY 126 (324)
Q Consensus 49 ~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~--~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~l 126 (324)
+.+..+|+++|+++||+++|++++|||.+++++..+.. .|. ....+++.||+...+...+..+|+++..++..|...
T Consensus 20 ~r~~~~l~~eA~~~AL~DAGl~~~dVD~v~~~~~~~~~-~~~~~~~~~~a~~lGl~g~p~~~v~~~~asG~~a~~~A~~~ 98 (399)
T PRK06059 20 GRDFTEYGVVAARAALADAGLDWRQVQLVAGADTIRNG-YPGFVAGATFAQKLGWNGVPVTSSYAACASGSQALQSARAQ 98 (399)
T ss_pred CCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCC-CCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 97989999999999998559998994688430345667-77532269999975998863112116248999999999999
Q ss_pred HHHCCCCCCEEEEECCCCCCC------------CCC--------------------------------------------
Q ss_conf 964155653167630224322------------245--------------------------------------------
Q gi|254780497|r 127 IRSGVVRRVMVIGSDTFSRIV------------DWS-------------------------------------------- 150 (324)
Q Consensus 127 i~~g~~~~~Lvv~~e~~S~~~------------d~~-------------------------------------------- 150 (324)
|++|.++.+||+++|...... +|.
T Consensus 99 I~sG~~d~vlvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~Al~a~rym~~yG~t~e~lA~vavk~~~~a~~ 178 (399)
T PRK06059 99 ILAGFCDVALVIGADTTPKGFFAPVGGERKNDPDWQRFHLIGATNTVYFALLARRRMDLYGATVEDFAQVKVKNARHGLD 178 (399)
T ss_pred HHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 98499878999403357876544554556677114443014785088999999999999797999999999999987710
Q ss_pred CCC-------------------------CCCCCCCCCCEEEEECCCCCCCCCC---C-CCCEEEEEECCCCCCCCEEECC
Q ss_conf 663-------------------------2323454431234402654465434---4-5410123203555556177548
Q gi|254780497|r 151 DRS-------------------------TCVLFGDGAGALILEGVEVKGSSMA---D-TGILSTYLCSDGSYIDKLYVDG 201 (324)
Q Consensus 151 d~~-------------------------~~~lfGDGAaA~ll~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~ 201 (324)
+|. -+...+|||+|+||.+.+....... . ..+......+ ..+...
T Consensus 179 NP~A~~r~~it~edvl~s~~Ia~PL~l~dc~~~sDGAaAvVl~s~e~A~~~~~~~~~~~~i~~~~~~~-~~~~~~----- 252 (399)
T PRK06059 179 NPNARYRKEVSVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFAEKHLGSVAGVPSVRAISTVT-PQYPQH----- 252 (399)
T ss_pred CCHHHCCCCCCHHHHCCCCHHHHCCCCCCCCCCCCCEEEEEEECHHHHHHHCCCCCCCEEEEEEEEEC-CCCCCC-----
T ss_conf 92866689988788723826452615513178888508999955999987223567883999998405-754433-----
Q ss_pred CCCCCCCCCCHHHCCHHHHHHHHHHH-HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH----HHH---
Q ss_conf 76544433200103202444557777-7778888987400100012102444441589999997197876----733---
Q gi|254780497|r 202 GPSTSRTVGCIRMEGKAVFKYAVEKA-VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD----KVI--- 273 (324)
Q Consensus 202 ~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~~--- 273 (324)
......+..+.........+.. ....+.+++++|++|+|||.+-+|-.--.+--...|.||+-+. +++
T Consensus 253 ----~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ay~~AGi~p~DiDvae~yD~ft~~~l~~lE~lGf~~~Ge~~~~v~~G 328 (399)
T PRK06059 253 ----LPELPDIATDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSG 328 (399)
T ss_pred ----CCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHCC
T ss_conf ----3233321222101023315567899999999982999788727753166609899999984997898379999779
Q ss_pred ---------HH----HHHHCCCHHHHHHHHHHHHHHC--CCC----CCCCEEEEEEECCCCCE-EEEEE
Q ss_conf ---------65----8651933012699999999980--688----99989999997145014-56878
Q gi|254780497|r 274 ---------VT----VDIHGNTSAASIPLALAVAVKE--GRV----KKGDCLLLEAMGGGFTS-GTVLL 322 (324)
Q Consensus 274 ---------~~----~~~~Gn~~sas~~~~L~~~~~~--g~l----~~Gd~vll~~~G~G~s~-~a~ll 322 (324)
.| +--.||...++=...+.++.++ |+- -+|-++-++.-+.|+.. +++++
T Consensus 329 ~~~~~G~lPvNtsGGlls~Ghp~gatG~~~~~E~~~QLrG~Ag~rQV~~a~~gl~~n~G~~~~~~~~~~ 397 (399)
T PRK06059 329 ATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCELTWQLRGQATGRQVEGAKVGITANQGLFGHGSSVIV 397 (399)
T ss_pred CCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEE
T ss_conf 966799703558860211899661579999999999974887677389861788747788777329998
No 39
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.67 E-value=2.3e-14 Score=111.45 Aligned_cols=297 Identities=20% Similarity=0.257 Sum_probs=169.9
Q ss_pred CEEEEEEEEEECCCCEECHHHHHHHH--CC------CHHHH---HHCC-C-CCEEEE-----ECCC-----------CCH
Q ss_conf 22699999996498411788999880--99------98781---1024-7-518898-----2898-----------899
Q gi|254780497|r 2 IRSTVRGIGLSLPRRVLSNSDLESIV--DT------SDGWI---KRRV-G-ISRRHI-----AGKD-----------ETT 52 (324)
Q Consensus 2 ~~~~I~~~g~ylP~~~v~~~el~~~~--~~------~~~~i---~~~~-G-I~~R~~-----~~~~-----------e~~ 52 (324)
.+|.|+|+|..+|.-. +.+++-+.+ +. +.... ..+. | +..... .+++ ...
T Consensus 4 ~rVaItGmg~~~P~g~-~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~ 82 (424)
T PRK06333 4 KRIVVTGMGVVSPLGN-GVETFWQRLLAGQSGIRTLTDFPCGDLATKIGGWVPELAEDAEAGFDPDPYLDPKDQRKMDRF 82 (424)
T ss_pred CCEEEECCEEECCCCC-CHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHCCCHHHHHHCCHH
T ss_conf 9899987687898989-999999999819985754896645478774232736744454346795664899999862999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCC-----CEEEEECCCCC-----------------CCCCC---------CCCCHHHHHHC
Q ss_conf 9999999999997402123544-----33665012233-----------------45898---------53100112202
Q gi|254780497|r 53 ASLGEAAARDALHHAEMSVDDI-----DLIIVATSTPD-----------------QTFPS---------TAVNIQNRLGM 101 (324)
Q Consensus 53 ~~la~~Aa~~al~~a~~~~~~I-----d~ii~~s~~~~-----------------~~~p~---------~a~~i~~~LGl 101 (324)
.-++.+|+.+||+++|++|+++ -.+++++.... .+.|. .+++|...+|+
T Consensus 83 ~~~~l~aa~eAl~dAG~~~~~~~~~~r~gvivgs~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~gl 162 (424)
T PRK06333 83 ITFAMAAAKEAIAQAGWDPDNLPDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYGF 162 (424)
T ss_pred HHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999997599824626776579999625685688999999997548654484034567766899999998199
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC-CC----------C------------CC-CCCCCCCCC
Q ss_conf 686444421012200346788899896415565316763022-43----------2------------22-456632323
Q gi|254780497|r 102 KRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF-SR----------I------------VD-WSDRSTCVL 157 (324)
Q Consensus 102 ~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~-S~----------~------------~d-~~d~~~~~l 157 (324)
+ .+++.+..+|+|++.||..|+.+|+.|+.+.+|+.++|.. +. . .. |+.....+.
T Consensus 163 ~-Gp~~tv~tACsSsl~Ai~~A~~~i~~G~~d~aivGg~~~~l~~~~~~~f~~~~~Ls~~~~~~p~~~~rPFD~~~dG~v 241 (424)
T PRK06333 163 K-GPLGAPVTACAAGVQAIGDAARLIRSGEADVAICGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRARDGFV 241 (424)
T ss_pred C-CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 8-962150646079999999999999778706000355133227077899987666512788885435651126899714
Q ss_pred CCCCCCEEEEECCCCCCCCCC--CCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 454431234402654465434--454101232035555561775487654443320010320244455777777788889
Q gi|254780497|r 158 FGDGAGALILEGVEVKGSSMA--DTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVF 235 (324)
Q Consensus 158 fGDGAaA~ll~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L 235 (324)
+|+||+++||++.+....... ...+.+....+|+.... ....++ ....+.++++|
T Consensus 242 ~gEGa~~~vLe~~~~A~~rg~~i~a~i~G~g~~~d~~~~~---------------~~~~~~--------~~~~~~m~~Al 298 (424)
T PRK06333 242 MGEGAGILVIETLEHALARGAPPLAELVGYGTTADAYHIT---------------SGPEDG--------EGARRAMEGAL 298 (424)
T ss_pred ECCCCCHHHCCCHHHHHHCCCCEEEEEEEEEEECCCCCCC---------------CCCCCH--------HHHHHHHHHHH
T ss_conf 0785212311668778658996689998789857998888---------------899883--------67799999999
Q ss_pred HHHHCCCCCCCCCCCCCCCHH-----HHHHHHHHCCCCHHHH-H-HHHHHHCCCHHHHHHHHHHH---HHHCCCCC----
Q ss_conf 874001000121024444415-----8999999719787673-3-65865193301269999999---99806889----
Q gi|254780497|r 236 DSTHLTIENIDWFVPHQANWR-----IINSIVDKMKIPFDKV-I-VTVDIHGNTSAASIPLALAV---AVKEGRVK---- 301 (324)
Q Consensus 236 ~~~gl~~~did~~~~Hq~~~~-----~~~~~~~~lgl~~e~~-~-~~~~~~Gn~~sas~~~~L~~---~~~~g~l~---- 301 (324)
++++++++|||++-.|-.+-. =.+.+.+.++=. .+. + .+=..+||+.+++=.+.+-. +++++.+.
T Consensus 299 ~~agi~~~~i~yI~aHgtgT~~gD~~E~~al~~~fg~~-~~~~i~S~K~~~GH~~~aaG~~~~i~~~l~l~~~~ippt~n 377 (424)
T PRK06333 299 RQAGIPPEQVQHLNAHATSTPVGDLGEVAAIKKVFGHV-KGLAISSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLN 377 (424)
T ss_pred HHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCC-CCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 98499914518799527878666999999999985878-88864781110032578899999999999985498399889
Q ss_pred ---------------------CCCEEEEEEEC-CCCCEEEEEEEC
Q ss_conf ---------------------99899999971-450145687869
Q gi|254780497|r 302 ---------------------KGDCLLLEAMG-GGFTSGTVLLRW 324 (324)
Q Consensus 302 ---------------------~Gd~vll~~~G-~G~s~~a~llrw 324 (324)
+-++++.-+|| +|.....++=||
T Consensus 378 ~~~p~p~~~~~~~v~~~~~~~~~~~al~nsfGfGG~Na~lil~~y 422 (424)
T PRK06333 378 LENPDPAAEGLDVVANKARPWDMDYALSNGFGFGGVNASILFRRW 422 (424)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECC
T ss_conf 999997777664358887217889999957055702158899501
No 40
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.67 E-value=1.3e-15 Score=119.43 Aligned_cols=99 Identities=25% Similarity=0.334 Sum_probs=86.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 9889999999999999974021235443366501223345898531001122026-864444210122003467888998
Q gi|254780497|r 48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADSY 126 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~l 126 (324)
.+.++.||+.++++++|++++++|++||.||+++..+...-+..+..+....|++ ..+++.|+..|+|++.|+..|...
T Consensus 22 ~~~~~~dL~~~a~~~~l~r~~l~~~~Id~vi~G~~~~~g~g~~~aR~~~l~aGlp~~vp~~tV~~~CaSGl~Ai~~A~~~ 101 (393)
T PRK08235 22 KDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETINKVCASGLRAVTLADQI 101 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHH
T ss_conf 89989999999999999873989899998999935733545519999999769998886078825440547999999999
Q ss_pred HHHCCCCCCEEEEECCCCCC
Q ss_conf 96415565316763022432
Q gi|254780497|r 127 IRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 127 i~~g~~~~~Lvv~~e~~S~~ 146 (324)
|++|..+.+|+++.|.+|+.
T Consensus 102 I~sG~~dv~lagGvEsmS~~ 121 (393)
T PRK08235 102 IRAGDASVIVAGGMESMSNA 121 (393)
T ss_pred HHCCCCCEEEEEEEEECCCC
T ss_conf 85898746688604654567
No 41
>PRK07800 consensus
Probab=99.66 E-value=4e-15 Score=116.31 Aligned_cols=100 Identities=24% Similarity=0.307 Sum_probs=86.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 89889999999999999974021235443366501223345898531001122026-86444421012200346788899
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADS 125 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~ 125 (324)
-++.++.||+.++++++|++++++|++||.||+++..+....+..+..+.-+.|++ ..+++.|+..|+|++.|+..|..
T Consensus 21 l~~~~~~~L~~~~i~~~l~~~gl~p~~Id~vi~G~v~~~g~g~n~aR~~~l~aglp~~vp~~tV~~~CaSGl~Ai~~A~~ 100 (393)
T PRK07800 21 LKDFSASDLGGIAIKAALEKAGVAADQVDYVIMGQVLQAGAGQIPARQAAVAAGIPMDVPALTINKVCLSGLDAIALADQ 100 (393)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHH
T ss_conf 79998899999999999997499989989899992476676650999999976989888569994501379999999999
Q ss_pred HHHHCCCCCCEEEEECCCCCC
Q ss_conf 896415565316763022432
Q gi|254780497|r 126 YIRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 126 li~~g~~~~~Lvv~~e~~S~~ 146 (324)
.|++|..+.+|+++.|.+|+.
T Consensus 101 ~I~~G~~dvvlagGvEsmS~~ 121 (393)
T PRK07800 101 LIRAGEFDVVVAGGQESMTQA 121 (393)
T ss_pred HHHCCCCCEEEEEEEECCCCC
T ss_conf 986799866789852024547
No 42
>PRK05790 acetyl-CoA acetyltransferase; Provisional
Probab=99.66 E-value=2.9e-15 Score=117.14 Aligned_cols=99 Identities=23% Similarity=0.304 Sum_probs=85.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 9889999999999999974021235443366501223345898531001122026-864444210122003467888998
Q gi|254780497|r 48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADSY 126 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~l 126 (324)
++.++.+|+.++++++|++++++|++||.|+++++.+....+..+.++.-..|++ ...++.|+..|+|++.|+..|...
T Consensus 22 ~~~~~~~L~~~ai~~~l~r~gi~~~~Id~vi~G~~~~~g~g~n~aR~~~l~aGlp~~vp~~tV~r~CaSG~~Ai~~A~~~ 101 (393)
T PRK05790 22 KDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAAIKAGLPVEVPALTINKVCGSGLKAVALAAQA 101 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHH
T ss_conf 88999999999999999982989899998999933656655549999999679998876489963115768999999998
Q ss_pred HHHCCCCCCEEEEECCCCCC
Q ss_conf 96415565316763022432
Q gi|254780497|r 127 IRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 127 i~~g~~~~~Lvv~~e~~S~~ 146 (324)
|++|..+.+|+++.|.+|+.
T Consensus 102 I~sG~~dvvlagGvEsmS~~ 121 (393)
T PRK05790 102 IRAGDADIVVAGGQESMSQA 121 (393)
T ss_pred HHCCCCCEEEEECCCCCCCC
T ss_conf 74799768999544324567
No 43
>PRK06845 consensus
Probab=99.66 E-value=2.8e-15 Score=117.28 Aligned_cols=99 Identities=25% Similarity=0.292 Sum_probs=84.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC-CCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 98899999999999999740212354433665012233458-98531001122026-86444421012200346788899
Q gi|254780497|r 48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTF-PSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADS 125 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~-p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~ 125 (324)
++.++.||+.++++.+|++++++|++||.++++++.+.... +..+.++.-..|++ ..+++.|+..|+|++.|+..|..
T Consensus 22 ~~~~~~~L~~~a~~~al~~~gi~~~~Id~vi~G~~~~~g~~~~~~aR~~aL~aGlp~~vp~~tV~~~CaSG~~Ai~~A~~ 101 (392)
T PRK06845 22 KDLSATDLGVAAAKAALEQAGVSPEDIGHVVFGNVIQTGKDAIYLARHIGLKAGLPVGVPALTVNRLCGSGFEAIIQAAK 101 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHH
T ss_conf 88999999999999999871979899798999815645654334999999976999888748884430388999999999
Q ss_pred HHHHCCCCCCEEEEECCCCCC
Q ss_conf 896415565316763022432
Q gi|254780497|r 126 YIRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 126 li~~g~~~~~Lvv~~e~~S~~ 146 (324)
.|++|.++.+|+++.|.+|+.
T Consensus 102 ~I~sG~~dvvlagGvEsmS~~ 122 (392)
T PRK06845 102 LIYLGEAEAVLAGGVESMSQA 122 (392)
T ss_pred HHHCCCCCEEEECCEECCCCC
T ss_conf 985799767886255205554
No 44
>PRK08256 lipid-transfer protein; Provisional
Probab=99.65 E-value=6.3e-15 Score=115.02 Aligned_cols=255 Identities=18% Similarity=0.176 Sum_probs=153.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 98899999999999999740212354433665012233458985310011220268644442101220034678889989
Q gi|254780497|r 48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYI 127 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li 127 (324)
++.+..+|+.+|+++||+++|++|+|||.++++.+.++... .......+|+...+++.++.+|+|++.++..|...|
T Consensus 18 ~~~~~~~L~~eA~~~AL~dAGi~~~~ID~v~~G~~~~~~~~---~~~a~~~~g~~g~P~~tV~~~CaSG~~Ai~~Aa~~I 94 (391)
T PRK08256 18 ASWDYPDMAAEAGRAALADAGIDYDEVQQAYVGYVYGDSTS---GQRALYEVGMTGIPVVNVNNNCSTGSTALFLARQAV 94 (391)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCC---HHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 99999999999999999982989899899989703687500---599999613369965888787616999999999999
Q ss_pred HHCCCCCCEEEEECCCCCCC---CCC------------------------------------------------------
Q ss_conf 64155653167630224322---245------------------------------------------------------
Q gi|254780497|r 128 RSGVVRRVMVIGSDTFSRIV---DWS------------------------------------------------------ 150 (324)
Q Consensus 128 ~~g~~~~~Lvv~~e~~S~~~---d~~------------------------------------------------------ 150 (324)
++|..+.+|+++.|.+|+.. .+.
T Consensus 95 ~sG~advvla~G~E~Ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~g~t~e~~A~vav~~ 174 (391)
T PRK08256 95 ASGAADCALALGFEQMQPGALGSVWDDRPSPLERHDKALAELVGFDGFPPALRMFGGAGREHMQKYGTTAETFAKIGAKA 174 (391)
T ss_pred HCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 76998889996440357666566658776711224566665304443638999999999999999786999859999997
Q ss_pred -------------CCC-------C-----------CCCCCCCCCEEEEECCCCCCCCCC--CCCCEEEEEECCCCCCCCE
Q ss_conf -------------663-------2-----------323454431234402654465434--4541012320355555617
Q gi|254780497|r 151 -------------DRS-------T-----------CVLFGDGAGALILEGVEVKGSSMA--DTGILSTYLCSDGSYIDKL 197 (324)
Q Consensus 151 -------------d~~-------~-----------~~lfGDGAaA~ll~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 197 (324)
++. + +....|||+|+||...+....... ...+......++.. ..
T Consensus 175 ~~~a~~np~A~~~~~~t~e~v~~s~~i~~plt~~~~s~~sDGAaAvvl~See~A~~~g~~~~v~I~g~a~~~~~~--~~- 251 (391)
T PRK08256 175 RRHAANNPYAQFRDEVTLEDVLASPMIWGPLTRLQCCPPTCGAAAAILCSEEFARKHGLDRAVEIAAQAMTTDFP--ST- 251 (391)
T ss_pred HHHHHHCCHHCCCCCCCHHHHHCCCCCCCHHHHHHCCCCCCCEEEEEEECHHHHHHCCCCCCEEEEEEEEECCCC--HH-
T ss_conf 898871961013788889998234852240257645899997189999569999864999877999999852672--00-
Q ss_pred EECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH----HHH
Q ss_conf 7548765444332001032024445577777778888987400100012102444441589999997197876----733
Q gi|254780497|r 198 YVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD----KVI 273 (324)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~~ 273 (324)
.... .. ..+. .........+++++++|++++|||.+-+|-+--..--...+.||+.++ +++
T Consensus 252 -~~~~-------~~-----~~~~--~~~~~~~Aa~~a~~~AGl~~~DiDv~Ei~daFa~~~l~~le~lG~~~~g~~~~~~ 316 (391)
T PRK08256 252 -FDGG-------DM-----INLV--GYDMTRAAAQQVYEQAGVGPEDIDVIELHDCFSANELLTYEALGLCPEGEAEKFI 316 (391)
T ss_pred -CCCC-------CC-----HHHC--CCCCHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHH
T ss_conf -1478-------81-----4430--5640699999999984999888767642155548899999981999888268898
Q ss_pred H------------H----HHHHCCCHHHHHHHH---HHHHHH----CCCCCCCCEEEEEEECCCCCEEEEEEE
Q ss_conf 6------------5----865193301269999---999998----068899989999997145014568786
Q gi|254780497|r 274 V------------T----VDIHGNTSAASIPLA---LAVAVK----EGRVKKGDCLLLEAMGGGFTSGTVLLR 323 (324)
Q Consensus 274 ~------------~----~~~~Gn~~sas~~~~---L~~~~~----~g~l~~Gd~vll~~~G~G~s~~a~llr 323 (324)
. | .--.||-..++=... +.+-++ ..+++.-...|....|.|-.+...+|+
T Consensus 317 ~~g~~~~~G~~pvN~~GG~la~GhP~GatG~~~~~e~~~QLrG~ag~rQV~~a~~aL~~~~G~gg~~~v~i~~ 389 (391)
T PRK08256 317 DDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQLRGTAGARQVEGARLALQHNLGLGGACVVTLYQ 389 (391)
T ss_pred HCCCCCCCCCEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEEE
T ss_conf 6688556998238189508646886645799999999999711020354787005766054645007999985
No 45
>pfam08545 ACP_syn_III 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III. This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.
Probab=99.65 E-value=1.6e-16 Score=125.15 Aligned_cols=80 Identities=60% Similarity=1.017 Sum_probs=72.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEE
Q ss_conf 44210122003467888998964155653167630224322245663232345443123440265446543445410123
Q gi|254780497|r 107 FDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGDGAGALILEGVEVKGSSMADTGILSTY 186 (324)
Q Consensus 107 ~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~ 186 (324)
|||+++|+|++++|++|..+|++|+++++|||++|++|+++||+|+.++++|||||+|+||++.+.. ..++++++
T Consensus 1 fDi~~~Csg~~~aL~~A~~~i~sg~~~~vLvv~~e~~s~~~~~~d~~~~~lfGDga~A~il~~~~~~-----~~~il~~~ 75 (80)
T pfam08545 1 FDINAACSGFVYALSTAAALIRSGRAKNVLVVGAETLSRILDWTDRSTAVLFGDGAGAVVLEATEEG-----GARILSSV 75 (80)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCEEEEEEEEECCCC-----CCEEEEEE
T ss_conf 9606414889999999999998799885899851124553686677246998640269999971789-----98488889
Q ss_pred EECCC
Q ss_conf 20355
Q gi|254780497|r 187 LCSDG 191 (324)
Q Consensus 187 ~~~~~ 191 (324)
+.+|+
T Consensus 76 ~~tdg 80 (80)
T pfam08545 76 LGSDG 80 (80)
T ss_pred EECCC
T ss_conf 84589
No 46
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=99.65 E-value=1.6e-14 Score=112.41 Aligned_cols=296 Identities=19% Similarity=0.248 Sum_probs=169.0
Q ss_pred EEEEEEEEEECCCCEECHHHH-HHHH-CCCHH-HHH--HCCCCCEE--------EE------E-----CCCCCHHHHHHH
Q ss_conf 269999999649841178899-9880-99987-811--02475188--------98------2-----898899999999
Q gi|254780497|r 3 RSTVRGIGLSLPRRVLSNSDL-ESIV-DTSDG-WIK--RRVGISRR--------HI------A-----GKDETTASLGEA 58 (324)
Q Consensus 3 ~~~I~~~g~ylP~~~v~~~el-~~~~-~~~~~-~i~--~~~GI~~R--------~~------~-----~~~e~~~~la~~ 58 (324)
+|.|+|+|..-|--. +.+++ +... |.+.- .|. ...+...+ -+ . ........+++.
T Consensus 62 RVVITGiGiVsp~G~-~~e~fw~aL~~G~SGI~~i~~fd~~~~~~~iageV~~~df~p~~~~~~~k~~~r~dr~~~~al~ 140 (477)
T PTZ00050 62 RVVCTGIGVVNGLGI-GIEHFWENIINGYNSIDKITKFDITGMACGIGSEIDKKDFNPSDYYTNKKDANRNDDCTHYAVA 140 (477)
T ss_pred CEEEECCHHHCCCCC-CHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHCCCCHHHHHHHCHHHHHHHH
T ss_conf 499958133178819-9999999997589981417866766897766886026788966604788888530799999999
Q ss_pred HHHHHHHHHCCCCCCCCE----EEEECCCCC-----------------CCCC---------CCCCCHHHHHHCCCCCCCC
Q ss_conf 999999740212354433----665012233-----------------4589---------8531001122026864444
Q gi|254780497|r 59 AARDALHHAEMSVDDIDL----IIVATSTPD-----------------QTFP---------STAVNIQNRLGMKRGFAFD 108 (324)
Q Consensus 59 Aa~~al~~a~~~~~~Id~----ii~~s~~~~-----------------~~~p---------~~a~~i~~~LGl~~~~~~d 108 (324)
|+++|++++|++++++|. +++++.... ...| ..+++|+..+|++ .+++.
T Consensus 141 Aa~eAl~DAgl~~~~~~~~r~Gv~iGs~~gg~~~~e~~~~~l~~~g~~~v~p~~~~~~~~n~~a~~is~~~~l~-Gps~t 219 (477)
T PTZ00050 141 ATRLAIDDAKIDLEKIDCDKTGTIIGSGIGGLLFLEKEMKTLYEKGHKRISPYLIPAMIANTPAGFVSIEHNIR-GISLG 219 (477)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC-CCCCC
T ss_conf 99999996799954367101534870487738999999999985497743852777888769999999973994-87567
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC-CCC----------C------------CCCC-CCCCCCCCCCCCE
Q ss_conf 21012200346788899896415565316763022-432----------2------------2456-6323234544312
Q gi|254780497|r 109 MQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF-SRI----------V------------DWSD-RSTCVLFGDGAGA 164 (324)
Q Consensus 109 i~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~-S~~----------~------------d~~d-~~~~~lfGDGAaA 164 (324)
+..+|+|++.||..|.++|+.|..+.+++.++|.. ++. + .+.| ....+.+|+||++
T Consensus 220 i~tACaSs~~AI~~A~~~Ir~G~~d~~IaGG~d~~l~p~~~~~f~~l~aL~s~~nd~P~~~~rPFD~~rdG~V~GEGag~ 299 (477)
T PTZ00050 220 MLSACATSGNTIGEAYRYIKYKEYDVMICGGTEASITPISFAGFNALKALCSGYNDNPKKGCRPFDLKRSGFVMGEGAGI 299 (477)
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCEEE
T ss_conf 04474788999999999997598455999845666672889999987655403678987672446589982772376589
Q ss_pred EEEECCCCCCCCCC--CCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 34402654465434--4541012320355555617754876544433200103202444557777777888898740010
Q gi|254780497|r 165 LILEGVEVKGSSMA--DTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTI 242 (324)
Q Consensus 165 ~ll~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~ 242 (324)
++|++.+....... ...+.+....+|+.+. .....++ ....+.++++|+++++++
T Consensus 300 lVLE~~e~A~~RGa~Iyaei~G~~~~~Dg~~~---------------t~p~p~g--------~g~~~am~~AL~~Agl~~ 356 (477)
T PTZ00050 300 LILESYEHAIKRNAKIYGEIIAYSSECDAFHI---------------TAPEPNG--------KGLCNSIHKAIKNANINI 356 (477)
T ss_pred EEEEEHHHHHHCCCEEEEEEECCCCCCCCCCC---------------CCCCCCH--------HHHHHHHHHHHHHHCCCC
T ss_conf 99728877765899886752055424689988---------------7749799--------999999999999717897
Q ss_pred CCCCCCCCCCCCHHH-----HHHHHHHCCCCHHHHH--HHHHHHCCCHHHHHHHHHHH---HHHCCCCCC----------
Q ss_conf 001210244444158-----9999997197876733--65865193301269999999---998068899----------
Q gi|254780497|r 243 ENIDWFVPHQANWRI-----INSIVDKMKIPFDKVI--VTVDIHGNTSAASIPLALAV---AVKEGRVKK---------- 302 (324)
Q Consensus 243 ~did~~~~Hq~~~~~-----~~~~~~~lgl~~e~~~--~~~~~~Gn~~sas~~~~L~~---~~~~g~l~~---------- 302 (324)
+|||++-.|-.+-.. .+.+.+.++=...+++ .+=..+||+..|+=.+.+.. +++++.+.|
T Consensus 357 ~dIdyInaHGTgT~~gD~~E~~Ai~~vfg~~~~~~~VsS~Ks~iGH~lgAAGa~e~i~~llal~~g~iPPt~n~~~~dp~ 436 (477)
T PTZ00050 357 NDVKYINAHGTSTNLNDKIETKVFKNVFKDHAYKLHISSTKSMTGHCIGAAGAIESIVCLKAMQTNIIPPTINYENKDDD 436 (477)
T ss_pred CCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEECCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 45008996177688789999999999865789986588861333004799999999999999841943898898998998
Q ss_pred ----------------CCEEEEEEECCCCCEEEEEEE
Q ss_conf ----------------989999997145014568786
Q gi|254780497|r 303 ----------------GDCLLLEAMGGGFTSGTVLLR 323 (324)
Q Consensus 303 ----------------Gd~vll~~~G~G~s~~a~llr 323 (324)
-+.+|--+||=|=+-.++++|
T Consensus 437 ~dl~~v~~~~~~~~~~~~~al~nSFGFGG~Na~lvl~ 473 (477)
T PTZ00050 437 CDLNYTPNESIHAKENIDISLNTNLGFGGHNTALLFG 473 (477)
T ss_pred CCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEE
T ss_conf 8866588854355678758999502377448999998
No 47
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.65 E-value=4e-14 Score=109.91 Aligned_cols=299 Identities=22% Similarity=0.301 Sum_probs=169.4
Q ss_pred EEEEEEEEEECCCCEECHHHH-HHHHCCCHH--HHHH--CCCCCEEEEEC----C------CCCHHHHHHHHHHHHHHHH
Q ss_conf 269999999649841178899-988099987--8110--24751889828----9------8899999999999999740
Q gi|254780497|r 3 RSTVRGIGLSLPRRVLSNSDL-ESIVDTSDG--WIKR--RVGISRRHIAG----K------DETTASLGEAAARDALHHA 67 (324)
Q Consensus 3 ~~~I~~~g~ylP~~~v~~~el-~~~~~~~~~--~i~~--~~GI~~R~~~~----~------~e~~~~la~~Aa~~al~~a 67 (324)
+|.|+|+|.-.|--. +.+++ .....-..+ .|.+ -.|...+.... + .....-++..|++++++++
T Consensus 12 rVvITG~G~vsp~G~-~~e~~w~~L~~G~Sgi~~i~~~~~~~~~~~~ag~vd~~~~~~~~~~~~~~~~~~~aa~~Al~da 90 (425)
T PRK06501 12 IVAVTGMGVVTSLGQ-GKADNWAALTAGESGIHTITRFPTEGLRTRIAGTVDFLPESPFGASALSEALARLAAEEALAQA 90 (425)
T ss_pred CEEEECCEEECCCCC-CHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHC
T ss_conf 999975557788828-9999999997499877738878865798757897888885663354799999999999999974
Q ss_pred CCCCCCCCEEE-----------------EECC----CCC----------CCCC---------CCCCCHHHHHHCCCCCCC
Q ss_conf 21235443366-----------------5012----233----------4589---------853100112202686444
Q gi|254780497|r 68 EMSVDDIDLII-----------------VATS----TPD----------QTFP---------STAVNIQNRLGMKRGFAF 107 (324)
Q Consensus 68 ~~~~~~Id~ii-----------------~~s~----~~~----------~~~p---------~~a~~i~~~LGl~~~~~~ 107 (324)
++++.+++.-+ .... .++ ...| ..+..|...+|++ .+++
T Consensus 91 gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~-Gp~~ 169 (425)
T PRK06501 91 GIGSGDFPGPLFLAVPPVELEWPARFELAAAVGANGPPSYDRLLRACRGGRFDALHERFLFGSIADRLADRFGTR-GLPI 169 (425)
T ss_pred CCCCCCCCCCCEECCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC-CCCC
T ss_conf 989455666510013554345565189999965785788999999628988884300223769999999986899-9871
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC-CC---------------------CCCCCCC-CCCCCCCCCCCE
Q ss_conf 421012200346788899896415565316763022-43---------------------2224566-323234544312
Q gi|254780497|r 108 DMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF-SR---------------------IVDWSDR-STCVLFGDGAGA 164 (324)
Q Consensus 108 di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~-S~---------------------~~d~~d~-~~~~lfGDGAaA 164 (324)
.++.+|+|++.||..|.++|+.|..+.++++++|.. +. ..++.|+ ...+++|+||++
T Consensus 170 tvstACASg~~AI~~A~~~Ir~G~~D~~iaGG~d~~~~~~~~~~f~~~~aLs~~~d~P~~a~RPFD~~RdG~v~GEGaa~ 249 (425)
T PRK06501 170 TLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPFSKDRDGFVMAEGAGA 249 (425)
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCEEECCCEEE
T ss_conf 42226278999999999999758988899933203436288889886323320789977676778889986353570799
Q ss_pred EEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 34402654465434454101232035555561775487654443320010320244455777777788889874001000
Q gi|254780497|r 165 LILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIEN 244 (324)
Q Consensus 165 ~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~d 244 (324)
+|||+.+....... .+..... ..+...+ +.. ......++ ....+.++++|++++++++|
T Consensus 250 lVLE~~~~A~~RGA--~I~a~i~-g~g~~~d-----~~~-----~~~~~p~~--------~~~~~~~~~al~~Ag~~~~~ 308 (425)
T PRK06501 250 LVLESLESAVARGA--KILGILA-GCGEKAD-----SFH-----RTRSSPDG--------SPAIGCVRAALADAGLTEDQ 308 (425)
T ss_pred EEECCHHHHHHCCC--EEEEEEE-CCEECCC-----CCC-----CCCCCCCH--------HHHHHHHHHHHHHHCCCCCC
T ss_conf 98333777986899--6999984-6276478-----988-----87799886--------99999999999982988245
Q ss_pred CCCCCCCCCCHHH-----HHHHHHHCCCCHHHH--HHHHHHHCCCHHHHHHHHHH---HHHHCCCCC-------------
Q ss_conf 1210244444158-----999999719787673--36586519330126999999---999806889-------------
Q gi|254780497|r 245 IDWFVPHQANWRI-----INSIVDKMKIPFDKV--IVTVDIHGNTSAASIPLALA---VAVKEGRVK------------- 301 (324)
Q Consensus 245 id~~~~Hq~~~~~-----~~~~~~~lgl~~e~~--~~~~~~~Gn~~sas~~~~L~---~~~~~g~l~------------- 301 (324)
||++..|-.+-.. .+.+.+.+|=...+. ..+=..+||+..++=.+.+. .+++++.+.
T Consensus 309 i~~i~aHgtgT~~~D~~E~~ai~~~fg~~~~~~~v~s~Ks~~GH~~gaaG~~e~~~~~lal~~~~ippt~n~~~~dp~~~ 388 (425)
T PRK06501 309 IDYINAHGTSTPENDKMEYLGLSAVFGERLSSIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQHGRIPPTINYDNPDPAIP 388 (425)
T ss_pred CCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 13798058768676799999999986356899868895343302379999999999999981395488999899999998
Q ss_pred -----------CCCEEEEEEEC-CCCCEEEEEEEC
Q ss_conf -----------99899999971-450145687869
Q gi|254780497|r 302 -----------KGDCLLLEAMG-GGFTSGTVLLRW 324 (324)
Q Consensus 302 -----------~Gd~vll~~~G-~G~s~~a~llrw 324 (324)
+-+++|.-+|| .|.....++=||
T Consensus 389 l~~v~~~~~~~~~~~al~nsfGFGG~Naslvl~r~ 423 (425)
T PRK06501 389 LDVVPNVARDARVTAVLSNSFGFGGQNASLVLTRE 423 (425)
T ss_pred CCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECC
T ss_conf 55289976578878999976147724379999637
No 48
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.65 E-value=4.5e-14 Score=109.55 Aligned_cols=298 Identities=17% Similarity=0.190 Sum_probs=166.0
Q ss_pred CCEEEEEEEEEECCCCEECHHHH-HHHHC-C------CHHHHHHCCCCCEEE---EEC-CCC-----------CHHHHHH
Q ss_conf 92269999999649841178899-98809-9------987811024751889---828-988-----------9999999
Q gi|254780497|r 1 MIRSTVRGIGLSLPRRVLSNSDL-ESIVD-T------SDGWIKRRVGISRRH---IAG-KDE-----------TTASLGE 57 (324)
Q Consensus 1 M~~~~I~~~g~ylP~~~v~~~el-~~~~~-~------~~~~i~~~~GI~~R~---~~~-~~e-----------~~~~la~ 57 (324)
|..|.|+|+|.-.|.-. +.+++ +.... . ++.++.+ .+...|. +.+ .+. ...-++.
T Consensus 11 ~~dVaItG~g~~~p~g~-~~~efw~~L~~G~sgi~~~~~~~~~~-~~~~~~~~g~~~~~fd~~~~~~~~~~~~~~~~~~~ 88 (418)
T PRK07910 11 FPNVVVTGIAMTTALAT-DAETTWKLLLDGQSGIRTLDDPFVEE-FDLPVRIGGHLLEEFDHQLTRVELRRLSYLQRMST 88 (418)
T ss_pred CCCEEEECCEEECCCCC-CHHHHHHHHHCCCCCEEECCCCCCHH-CCCCCEEEEEECCCCCCCCCHHCHHHHHHHHHHHH
T ss_conf 98999977787898959-99999999973898767478422001-38961273365667665578026876359999999
Q ss_pred HHHHHHHHHHC---CCCCCCCEEEEECCCC------------C----CCC--------C-CCCCCHHHHHHCCCCCCCCC
Q ss_conf 99999997402---1235443366501223------------3----458--------9-85310011220268644442
Q gi|254780497|r 58 AAARDALHHAE---MSVDDIDLIIVATSTP------------D----QTF--------P-STAVNIQNRLGMKRGFAFDM 109 (324)
Q Consensus 58 ~Aa~~al~~a~---~~~~~Id~ii~~s~~~------------~----~~~--------p-~~a~~i~~~LGl~~~~~~di 109 (324)
.+++++++++| ++++.+..++..+... . ... | ..+..+...+|++ ..++.+
T Consensus 89 ~~~~~a~edaG~~~~~~~r~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~-Gp~~t~ 167 (418)
T PRK07910 89 VLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFSYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAK-AGVITP 167 (418)
T ss_pred HHHHHHHHHCCCCCCCHHHCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-CCCCCC
T ss_conf 9999999977999888225017988731555889999999985485655877899986637999999982897-885553
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC-CC----------C------------CCCCC-CCCCCCCCCCCCEE
Q ss_conf 1012200346788899896415565316763022-43----------2------------22456-63232345443123
Q gi|254780497|r 110 QAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF-SR----------I------------VDWSD-RSTCVLFGDGAGAL 165 (324)
Q Consensus 110 ~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~-S~----------~------------~d~~d-~~~~~lfGDGAaA~ 165 (324)
..+|++++.||..|+.+|+.|+++.+|+.++|.. ++ . ..+.| ....+++|+||+++
T Consensus 168 ~tACsSs~~Ai~~A~~~I~~G~~d~ai~GG~~~~l~~~~~~~f~~l~~~~s~~~~~p~~~~rPFD~~rdG~v~gEGag~l 247 (418)
T PRK07910 168 VSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRDGFVFGEGGALM 247 (418)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCEEEE
T ss_conf 05323488999999999980998889954522126817789999977774458899887768655678986404824888
Q ss_pred EEECCCCCCCCCC--CCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 4402654465434--45410123203555556177548765444332001032024445577777778888987400100
Q gi|254780497|r 166 ILEGVEVKGSSMA--DTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIE 243 (324)
Q Consensus 166 ll~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~ 243 (324)
||++.+....... ...+.++-..+|+... .....++ +...+.++++|++++++++
T Consensus 248 vLe~l~~A~~rGa~I~a~i~G~g~~~Dg~~~---------------~~p~p~g--------~~~~~am~~Al~~agl~p~ 304 (418)
T PRK07910 248 VIETEEHAKARGANILARIMGASITSDGYHM---------------VAPDPNG--------ERAGHAMTRAIQLAGLTPT 304 (418)
T ss_pred EEECHHHHHHCCCEEEEEEEEEEECCCCCCC---------------CCCCCCC--------HHHHHHHHHHHHHHCCCCC
T ss_conf 8502545663698578998513645888887---------------5789980--------7899999999998289953
Q ss_pred CCCCCCCCCCCHHH-----HHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH---HHHHCCCCCC-------------
Q ss_conf 01210244444158-----99999971978767336586519330126999999---9998068899-------------
Q gi|254780497|r 244 NIDWFVPHQANWRI-----INSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALA---VAVKEGRVKK------------- 302 (324)
Q Consensus 244 did~~~~Hq~~~~~-----~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~---~~~~~g~l~~------------- 302 (324)
|||++-.|-.+-.. .+++.+.++=..-.+..+=..+||+-+|+=.+.+- .+++.+.+.|
T Consensus 305 ~IdyI~aHGTgT~~gD~~E~~Ai~~vfg~~~~~v~S~Ks~iGH~~~AaG~~e~i~~~lal~~~~ipPt~n~~~~dp~~~l 384 (418)
T PRK07910 305 DIDHVNAHATGTSVGDVAEGRAINNALGGHRPAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLKNLDPEIDL 384 (418)
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEECCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 40779956777876699999999998669998412812434203899999999999999724975889998999999995
Q ss_pred -----------CCEEEEEEEC-CCCCEEEEEEEC
Q ss_conf -----------9899999971-450145687869
Q gi|254780497|r 303 -----------GDCLLLEAMG-GGFTSGTVLLRW 324 (324)
Q Consensus 303 -----------Gd~vll~~~G-~G~s~~a~llrw 324 (324)
-++++.-+|| +|..+..++=||
T Consensus 385 ~~v~~~~~~~~~~~al~nsfGfGG~N~~lvl~ry 418 (418)
T PRK07910 385 DVVAGEPRPGNYRYAINNSFGFGGHNVALAFGRY 418 (418)
T ss_pred CCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECC
T ss_conf 4388987679988999945055810269998359
No 49
>pfam02797 Chal_sti_synt_C Chalcone and stilbene synthases, C-terminal domain. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain.
Probab=99.65 E-value=5.1e-16 Score=121.97 Aligned_cols=107 Identities=22% Similarity=0.297 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHH---HHHHHHHCCCHHHHHHHHHHH
Q ss_conf 02444557777777888898740010001210244444158999999719787673---365865193301269999999
Q gi|254780497|r 217 KAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKV---IVTVDIHGNTSAASIPLALAV 293 (324)
Q Consensus 217 ~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~---~~~~~~~Gn~~sas~~~~L~~ 293 (324)
+.+...+-+++.+.+.++|++.+++..|+.+|++|++++++++++.+.|++++++. +.++.+|||++|+++++.|++
T Consensus 32 ~~VP~~i~~~l~~~v~~~L~~~gl~~~d~~~wa~HPGG~~Ilda~~~~L~L~~~~l~~Sr~vL~~~GNmSS~tVlfVLe~ 111 (151)
T pfam02797 32 KDVPQLISKNIEKCLVEAFDPLGISDWNSIFWIAHPGGPAILDQVEAKLGLKPEKLRASRHVLSEYGNMSSACVLFILDE 111 (151)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 26369999989999999998749983324527887997899999999819998999999999997586189999999999
Q ss_pred HHHCC----CCCCC---CEEEEEEECCCCCEEEEEEE
Q ss_conf 99806----88999---89999997145014568786
Q gi|254780497|r 294 AVKEG----RVKKG---DCLLLEAMGGGFTSGTVLLR 323 (324)
Q Consensus 294 ~~~~g----~l~~G---d~vll~~~G~G~s~~a~llr 323 (324)
.++.. .-.+| ++.++++||+||++.++++|
T Consensus 112 ~~~~~~~~~~~~~g~~~e~gl~~AfGPG~t~E~~LLR 148 (151)
T pfam02797 112 MRKKSLKKGKSTTGEGLEWGVLFGFGPGLTVETVVLR 148 (151)
T ss_pred HHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHH
T ss_conf 9976644478888888656899996882999999970
No 50
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.64 E-value=1.3e-14 Score=112.93 Aligned_cols=202 Identities=23% Similarity=0.235 Sum_probs=133.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC--CCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 98899999999999999740212354433665012233458--9853100112202686444421012200346788899
Q gi|254780497|r 48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTF--PSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADS 125 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~--p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~ 125 (324)
.+.+..||+++|++++|+++|++|+|||-|++++..+.... +..+..++..+|+++..++.++.+|+|++.++..|..
T Consensus 18 ~~~~~~dL~~~a~~~al~~agl~~~~ID~vi~G~~~~g~~~~~~~~a~~~a~~~Gl~~~p~~~v~~~c~SG~~Ai~~Aa~ 97 (389)
T PRK06064 18 WDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSGGRFVGQEHIAALIADYAGLAPIPATRVEAACASGGAAVRQAYL 97 (389)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH
T ss_conf 99799999999999999980949899599999812766434324099999997599998668993753679999999999
Q ss_pred HHHHCCCCCCEEEEECCCCCCCCCC---------CCC-------------------------------------------
Q ss_conf 8964155653167630224322245---------663-------------------------------------------
Q gi|254780497|r 126 YIRSGVVRRVMVIGSDTFSRIVDWS---------DRS------------------------------------------- 153 (324)
Q Consensus 126 li~~g~~~~~Lvv~~e~~S~~~d~~---------d~~------------------------------------------- 153 (324)
.|++|.++.+|+++.|.+|+.-... |+.
T Consensus 98 ~I~sG~~dvvlagG~E~ms~~p~~~~~~~~~~~~d~~~~~~~g~~~~~~~a~~a~~~~~~ygitre~~~~~A~~s~~~A~ 177 (389)
T PRK06064 98 AVASGEADVVLAAGVEKMTDVPTPDATEAIARAADREWEEFFGATFPGLYALIARAYMHKYGTTEEDLALVAVKNHYNGS 177 (389)
T ss_pred HHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 99739998999944223577987642112220244220101488719999999999999969699999999997556542
Q ss_pred -----------------------------CCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCC
Q ss_conf -----------------------------232345443123440265446543445410123203555556177548765
Q gi|254780497|r 154 -----------------------------TCVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPS 204 (324)
Q Consensus 154 -----------------------------~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (324)
.+....|||+|+||.+.+.... .....+ ++...+...+.... .
T Consensus 178 ~np~a~~~~~it~e~~~~~~~i~~pl~~~n~s~~~DGAaAvvl~s~~~A~~-l~~~pv---~i~g~~~~~~~~~~--~-- 249 (389)
T PRK06064 178 KNPYAQFQNEITVEQVLNSPYVADPLKLLDCSPITDGAAAVILASEEKAKE-YTDTPV---WIKASGQASDTIAL--H-- 249 (389)
T ss_pred CCCHHCCCCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCEEEEEECHHHHHH-CCCCCE---EEEEEEEEECCCCC--C--
T ss_conf 395210568865989645444335102211146788744999925999986-589975---99999999512113--6--
Q ss_pred CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCH
Q ss_conf 44433200103202444557777777888898740010001210244444158999999719787
Q gi|254780497|r 205 TSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPF 269 (324)
Q Consensus 205 ~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~ 269 (324)
.. +.+. ........++++|+++|++++|||.|-+|-+-....-...+.||+-+
T Consensus 250 ~~----------~~~~--~~~~~~~A~~~al~~aGl~~~DiD~~ElneaFa~~~l~~~e~LGl~~ 302 (389)
T PRK06064 250 DR----------KDFT--TLEAAVVAAEKAYKMAGIDPKDIDVAEVHDCFTIAEILAYEDLGFAK 302 (389)
T ss_pred CC----------CCCC--CCCHHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHHHHHHHCCCCC
T ss_conf 78----------7534--58728999999999829998887688741554799999999829996
No 51
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=99.64 E-value=5.9e-14 Score=108.80 Aligned_cols=247 Identities=13% Similarity=0.103 Sum_probs=151.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 98899999999999999740212354433665012233458985310011220268644442101220034678889989
Q gi|254780497|r 48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYI 127 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li 127 (324)
++.+..+|+.+|+++||+++|++++|||.+++++...+......+..+...||+.+.....++++|+++..++..|...|
T Consensus 23 ~~~s~~~L~~eA~~~AL~DAGl~~~dID~~~~g~~~~~~~~~~~~~~l~~~lg~~~~p~~~v~~~~asG~~al~~A~~aI 102 (400)
T PRK06157 23 WDAGGEDLMVEAYQEAIADAGIEPKQIEAAWFGTHYDEIGTGKSGTPLSMALRLPNIPVTRVENFCATGTEAFRGAVYAV 102 (400)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 99799999999999999973999899899989814775445525799999618998733786477449999999999999
Q ss_pred HHCCCCCCEEEEECCCCCCC---------------------------------------CCCC-----------------
Q ss_conf 64155653167630224322---------------------------------------2456-----------------
Q gi|254780497|r 128 RSGVVRRVMVIGSDTFSRIV---------------------------------------DWSD----------------- 151 (324)
Q Consensus 128 ~~g~~~~~Lvv~~e~~S~~~---------------------------------------d~~d----------------- 151 (324)
++|.++.+|+++.|..+..- .+++
T Consensus 103 ~sG~~d~vlv~g~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~A~~a~~ym~~yG~t~e~l~~~~A~VAvk~r~nA~ 182 (400)
T PRK06157 103 ASGAYDIALALGVEKLKDTGYGGLPVASRGTLAPMWMPNGSAPGNFAQLASAYRAKHGVSREDLKRAMAHVSVKSHANGA 182 (400)
T ss_pred HCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 80988789996454256775344754345630344302587389999999999999797987899999999999999986
Q ss_pred --CC--------------C-----------CCCCCCCCCEEEEECCCCCCCCCCCCCC-EEEE-EECCCCCCCCEEECCC
Q ss_conf --63--------------2-----------3234544312344026544654344541-0123-2035555561775487
Q gi|254780497|r 152 --RS--------------T-----------CVLFGDGAGALILEGVEVKGSSMADTGI-LSTY-LCSDGSYIDKLYVDGG 202 (324)
Q Consensus 152 --~~--------------~-----------~~lfGDGAaA~ll~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~ 202 (324)
|. + +...+|||+|+||.+.+.......+..+ +... ..+.. ...
T Consensus 183 ~NP~A~~r~~iT~edvl~s~~Ia~PL~llDc~~~sDGAaAvVv~S~e~Ar~l~~~~~v~i~~~~~~~~~-~~~------- 254 (400)
T PRK06157 183 RNPKAHLRKAVTEEQVLNAPMVAYPLGLFDCCGVSDGAACAIVTTPEIARALGKKDLVTVKALQLAVSN-GWE------- 254 (400)
T ss_pred HCCCCCCCCCCCHHHHCCCCCCCCCCCHHHCCCCCCEEEEEEEECHHHHHHCCCCCCEEEEEEEEECCC-CCC-------
T ss_conf 097412569988788712886768894887588778059999956999986078996799999986268-874-------
Q ss_pred CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCCCCCCCCCCHHHHHHHHHHCCCCHH----HHHH--
Q ss_conf 6544433200103202444557777777888898740010--0012102444441589999997197876----7336--
Q gi|254780497|r 203 PSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTI--ENIDWFVPHQANWRIINSIVDKMKIPFD----KVIV-- 274 (324)
Q Consensus 203 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~--~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~~~-- 274 (324)
........ ..........+++++++|+++ +|||.+-+|-.--..--.+.|.||+-+. +++.
T Consensus 255 -~~~~~~~~----------~~~~~~~~aa~~a~~~AGi~~p~~DiDv~elyD~Ft~~~l~~lE~lGfc~~Ge~~~~~~~G 323 (400)
T PRK06157 255 -SQYNGWDG----------SYFHTTRVAAKKAYAEAGIEDPRKELSLMEVHDCFSITELVTMEDLGLSEPGQAWRDVLDG 323 (400)
T ss_pred -CCCCCCCC----------CCCHHHHHHHHHHHHHHCCCCCHHHCEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHCC
T ss_conf -34665543----------3348899999999998079997666608886166628999999981998888279999779
Q ss_pred ----------H----HHHHCCCHHHHHHHHHHHHHHC-------CCCCCCCEEEEEEECC
Q ss_conf ----------5----8651933012699999999980-------6889998999999714
Q gi|254780497|r 275 ----------T----VDIHGNTSAASIPLALAVAVKE-------GRVKKGDCLLLEAMGG 313 (324)
Q Consensus 275 ----------~----~~~~Gn~~sas~~~~L~~~~~~-------g~l~~Gd~vll~~~G~ 313 (324)
| +--.||...++=+..+.++.++ .+++.-+..|..+.|.
T Consensus 324 ~~~~~G~lPvNtsGGlls~Ghp~gatG~~~~~E~~~QLrG~Ag~rQV~~a~~~l~~~~GG 383 (400)
T PRK06157 324 FFDADGGVPCQIDGGLKCFGHPIGASGLRMLYEMYLQLLGRAGERQLKDPRLGLTHNLGG 383 (400)
T ss_pred CCCCCCCEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCC
T ss_conf 835799730668850530798674009999999999964776566489864899957898
No 52
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.64 E-value=4.7e-14 Score=109.44 Aligned_cols=297 Identities=19% Similarity=0.251 Sum_probs=169.1
Q ss_pred CEEEEEEEEEECCCCEECHHHHHH-HHCCCHHH--HH--HCCCCCEEEEEC-CC---------------CCHHHHHHHHH
Q ss_conf 226999999964984117889998-80999878--11--024751889828-98---------------89999999999
Q gi|254780497|r 2 IRSTVRGIGLSLPRRVLSNSDLES-IVDTSDGW--IK--RRVGISRRHIAG-KD---------------ETTASLGEAAA 60 (324)
Q Consensus 2 ~~~~I~~~g~ylP~~~v~~~el~~-~~~~~~~~--i~--~~~GI~~R~~~~-~~---------------e~~~~la~~Aa 60 (324)
.+|.|+|+|.-.|.-. +.|++-+ ...-.... +. ...+...|.... ++ ....-++.+++
T Consensus 4 rrVaItG~g~~~p~g~-~~e~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~fd~~~~~~~~~~~~~d~~~~~~l~aa 82 (414)
T PRK08722 4 RRVVVTGMGMLSPVGN-TVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKDFNCEEYMSKKDARKMDLFIQYGIAAG 82 (414)
T ss_pred CCEEEECCEEECCCCC-CHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHCCHHHHHHHHHH
T ss_conf 9799987686897959-999999999739983663784565579886657728889467589999986699999999999
Q ss_pred HHHHHHHCCCCCCCCE----EEEECCCC-----------------CCC----CCC-----CCCCHHHHHHCCCCCCCCCC
Q ss_conf 9999740212354433----66501223-----------------345----898-----53100112202686444421
Q gi|254780497|r 61 RDALHHAEMSVDDIDL----IIVATSTP-----------------DQT----FPS-----TAVNIQNRLGMKRGFAFDMQ 110 (324)
Q Consensus 61 ~~al~~a~~~~~~Id~----ii~~s~~~-----------------~~~----~p~-----~a~~i~~~LGl~~~~~~di~ 110 (324)
.+||+++|+++.+++. +++++... ... .|. .+.+|...+|++ .+++.++
T Consensus 83 ~~Al~dAGl~~~~~~~~r~Gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~gl~-Gp~~tv~ 161 (414)
T PRK08722 83 IQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHKALVEKGPRKISPFFVPSTIVNMIAGHMSIMRGLR-GPNIAIS 161 (414)
T ss_pred HHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC-CCCCCCC
T ss_conf 999996289943246564479994056717779999999985486545842222457789999999983998-9872535
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCC-C----------C-----------CCCCC-CCCCCCCCCCCCEEEE
Q ss_conf 0122003467888998964155653167630224-3----------2-----------22456-6323234544312344
Q gi|254780497|r 111 AVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFS-R----------I-----------VDWSD-RSTCVLFGDGAGALIL 167 (324)
Q Consensus 111 ~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S-~----------~-----------~d~~d-~~~~~lfGDGAaA~ll 167 (324)
.+|+|++.||..|+.+|+.|..+.+++.++|... + . ..+.| ....+.+|+||+++||
T Consensus 162 tACsS~l~Ai~~A~~~I~~G~~d~aivGG~~~~~~p~~~~~f~~~~~ls~~~~~p~~~~rPFD~~rdG~v~gEGa~~~vL 241 (414)
T PRK08722 162 TACTTGLHNIGHAARMIAYGDADAMLAGGAEKASTPLGMGGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGMMVL 241 (414)
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEE
T ss_conf 54078999999999998679857443277322038288999886531202589965465665579998353064218987
Q ss_pred ECCCCCCCCCCC--CCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 026544654344--541012320355555617754876544433200103202444557777777888898740010001
Q gi|254780497|r 168 EGVEVKGSSMAD--TGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENI 245 (324)
Q Consensus 168 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~di 245 (324)
++.+........ ..+.+.-..+|+.. ......++ ......++++|++++++++||
T Consensus 242 e~~~~A~~rGa~i~a~i~G~g~~~d~~~---------------~~~p~p~g--------~~~~~~m~~al~~agi~~~~I 298 (414)
T PRK08722 242 EEYEHAKARGAKIYAELVGFGMSGDAYH---------------MTSPSEDG--------SGGALAMEAAMRDAGITGEQI 298 (414)
T ss_pred EEHHHHHHCCCCCEEEEEEEEECCCCCC---------------CCCCCCCH--------HHHHHHHHHHHHHCCCCHHHC
T ss_conf 0088898679974399987875368888---------------86679757--------999999999998749998788
Q ss_pred CCCCCCCCCHHH-----HHHHHHHCCCC-HHHHH-H-HHHHHCCCHHHHHHHHHHH---HHHCCCCCC------------
Q ss_conf 210244444158-----99999971978-76733-6-5865193301269999999---998068899------------
Q gi|254780497|r 246 DWFVPHQANWRI-----INSIVDKMKIP-FDKVI-V-TVDIHGNTSAASIPLALAV---AVKEGRVKK------------ 302 (324)
Q Consensus 246 d~~~~Hq~~~~~-----~~~~~~~lgl~-~e~~~-~-~~~~~Gn~~sas~~~~L~~---~~~~g~l~~------------ 302 (324)
|++-.|-.+-.. .+.+.+.++-. .++++ . +=..+||+.+++=.+.+-. +++++.+.|
T Consensus 299 ~yI~aHGTgT~~gD~~E~~ai~~~fg~~~~~~~~v~S~Ks~iGH~~~AaG~~~~i~~~lal~~~~ippt~n~~~p~~~~~ 378 (414)
T PRK08722 299 GYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLD 378 (414)
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 66986358787759999999999966357897521470033022378889999999999996498189899999898888
Q ss_pred -------------CCEEEEEEECCCCCEEEEEEE
Q ss_conf -------------989999997145014568786
Q gi|254780497|r 303 -------------GDCLLLEAMGGGFTSGTVLLR 323 (324)
Q Consensus 303 -------------Gd~vll~~~G~G~s~~a~llr 323 (324)
-.+++.-+||-|=+-.+++||
T Consensus 379 l~~~p~~~~~~~~~~~al~nsfGfGG~Na~lvl~ 412 (414)
T PRK08722 379 IDLVPHTARKVEGMEYAICNSFGFGGTNGSLIFK 412 (414)
T ss_pred CCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEE
T ss_conf 5358787766789848999670668222899999
No 53
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.64 E-value=6.3e-14 Score=108.63 Aligned_cols=292 Identities=18% Similarity=0.283 Sum_probs=163.2
Q ss_pred CCEEEEEEEEEECCCCEECHHHH-HHHHC-CC-----HHHHHHCCCCCEEEEECCC---------------CCHHHHHHH
Q ss_conf 92269999999649841178899-98809-99-----8781102475188982898---------------899999999
Q gi|254780497|r 1 MIRSTVRGIGLSLPRRVLSNSDL-ESIVD-TS-----DGWIKRRVGISRRHIAGKD---------------ETTASLGEA 58 (324)
Q Consensus 1 M~~~~I~~~g~ylP~~~v~~~el-~~~~~-~~-----~~~i~~~~GI~~R~~~~~~---------------e~~~~la~~ 58 (324)
|++|.|+|+|...|--. +.+++ +.... .+ +++. ..|...+....++ ....-++..
T Consensus 1 mrrVvITG~G~vsp~G~-~~~e~w~~L~~G~sgi~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~r~~~~~~~~a~~ 77 (406)
T PRK07967 1 MRRVVITGLGIVSSIGN-NQQEVLASLREGRSGITFSQEFA--ELGMRSQVWGNVKLDPEELIDRKVMRFMGDAAAYAYL 77 (406)
T ss_pred CCEEEEECCEEECCCCC-CHHHHHHHHHCCCCCEEECCCCC--CCCCCCCEEEECCCCHHHCCCHHHHHCCCHHHHHHHH
T ss_conf 97199985437898829-99999999981999766688544--4599761677568893660898887027999999999
Q ss_pred HHHHHHHHHCCCCCCCC----EEEEECCCCC------------------CCCC--------C-CCCCHHHHHHCCCCCCC
Q ss_conf 99999974021235443----3665012233------------------4589--------8-53100112202686444
Q gi|254780497|r 59 AARDALHHAEMSVDDID----LIIVATSTPD------------------QTFP--------S-TAVNIQNRLGMKRGFAF 107 (324)
Q Consensus 59 Aa~~al~~a~~~~~~Id----~ii~~s~~~~------------------~~~p--------~-~a~~i~~~LGl~~~~~~ 107 (324)
|+++||+++|+++++++ -|+.++..+. ...| + .+..+...+|++ .+++
T Consensus 78 Aa~eAl~dAGl~~~~~~~~r~Gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~a~~is~~~~l~-Gp~~ 156 (406)
T PRK07967 78 AMEQAIADAGLSEDQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIK-GVNY 156 (406)
T ss_pred HHHHHHHHCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC-CCCC
T ss_conf 999999975998245585654899927873188899999998741897622834899886668999999984899-9753
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC----------------------CCCCC-CCCCCCCCCCCCE
Q ss_conf 421012200346788899896415565316763022432----------------------22456-6323234544312
Q gi|254780497|r 108 DMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRI----------------------VDWSD-RSTCVLFGDGAGA 164 (324)
Q Consensus 108 di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~----------------------~d~~d-~~~~~lfGDGAaA 164 (324)
.+..+|++++.||..|..+|++|..+.+|+.++|..+.. ..+.| ....+.+|+||++
T Consensus 157 tv~~aCas~~~Ai~~A~~~i~~G~~d~~i~GG~d~~~~~~~~~~~~~~~l~~~~~~~P~~~~rPFd~~r~G~v~gEGa~~ 236 (406)
T PRK07967 157 SISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRDGFVIAGGGGV 236 (406)
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 54542127889999999999769978777144023575134467777777622477987675666688998414775799
Q ss_pred EEEECCCCCCCCCCC--CCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 344026544654344--541012320355555617754876544433200103202444557777777888898740010
Q gi|254780497|r 165 LILEGVEVKGSSMAD--TGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTI 242 (324)
Q Consensus 165 ~ll~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~ 242 (324)
+||++.+........ ..+.+....+|+ ......++ +...+.++++|+..+
T Consensus 237 lvLE~~e~A~~rGa~i~a~i~g~g~~~d~-----------------~~~~~p~~--------~g~~~~~~~al~~~~--- 288 (406)
T PRK07967 237 VVVEELEHALARGAKIYAEIVGYGATSDG-----------------YDMVAPSG--------EGAVRCMQMALATVD--- 288 (406)
T ss_pred EEEHHHHHHHHCCCEEEEEEECCEECCCC-----------------CCCCCCCH--------HHHHHHHHHHHHCCC---
T ss_conf 86101688986899789999353431589-----------------88879878--------999999999982644---
Q ss_pred CCCCCCCCCCCCHHH-----HHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH---HHHHCCCCC-------------
Q ss_conf 001210244444158-----99999971978767336586519330126999999---999806889-------------
Q gi|254780497|r 243 ENIDWFVPHQANWRI-----INSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALA---VAVKEGRVK------------- 301 (324)
Q Consensus 243 ~did~~~~Hq~~~~~-----~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~---~~~~~g~l~------------- 301 (324)
.|||++..|-.+-.. .+.+.+.++-..-.+-.+=..+||+..++=.+.+- .+++++.+.
T Consensus 289 ~~idyi~aHgtgt~~~D~~E~~Ai~~~fg~~~~~v~s~K~~~GH~~~aaGa~e~i~~~~al~~~~ippt~n~~~~dp~~~ 368 (406)
T PRK07967 289 TPIDYINPHGTSTPVGDVKELGAIREVFGDKCPAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAA 368 (406)
T ss_pred CCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 34658995457687889999999999867789830166565456517679999999999996197289999899993224
Q ss_pred ------------CCCEEEEEEEC-CCCCEEEEEEEC
Q ss_conf ------------99899999971-450145687869
Q gi|254780497|r 302 ------------KGDCLLLEAMG-GGFTSGTVLLRW 324 (324)
Q Consensus 302 ------------~Gd~vll~~~G-~G~s~~a~llrw 324 (324)
+-+++|.-+|| .|.....++=||
T Consensus 369 ~l~~v~~~~~~~~~~~al~nsfGFGG~Na~lvl~r~ 404 (406)
T PRK07967 369 GMPIVTETTDNAKLTTVMSNSFGFGGTNATLVFRRY 404 (406)
T ss_pred CCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEEE
T ss_conf 897568887678878899956148835489999643
No 54
>PRK06364 consensus
Probab=99.64 E-value=7.7e-14 Score=108.10 Aligned_cols=254 Identities=20% Similarity=0.249 Sum_probs=152.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC--CCCCCCCHHHHHHCC--CCCCCCCCCCCCCHHHHHHHH
Q ss_conf 9889999999999999974021235443366501223345--898531001122026--864444210122003467888
Q gi|254780497|r 48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQT--FPSTAVNIQNRLGMK--RGFAFDMQAVCSGFVYAVTTA 123 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~--~p~~a~~i~~~LGl~--~~~~~di~~~C~~~~~al~~A 123 (324)
++.+..+|+.+|+++||+++|++|+|||.++.++...... ....+..++...|++ +.+++.++.+|+++..++..|
T Consensus 21 ~~~s~~~L~~eA~~~Al~dAgl~~~dID~v~~~~~~~g~~~~~~~~~~~~a~~~gl~~~~vp~~~V~~~caSG~~Ai~~A 100 (389)
T PRK06364 21 WDKSLRDLAVEAGLEAIKDANIYSKDLQMLYASNSLAGTINEQSNIAALAADFSGIAEEHVPAVRVEASTASGGAAVREA 100 (389)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHH
T ss_conf 99798999999999999880989899899988156665556524399999997599855886699887017899999999
Q ss_pred HHHHHHCCCCCCEEEEECCCCCCC------------C--CC---------------------------------------
Q ss_conf 998964155653167630224322------------2--45---------------------------------------
Q gi|254780497|r 124 DSYIRSGVVRRVMVIGSDTFSRIV------------D--WS--------------------------------------- 150 (324)
Q Consensus 124 ~~li~~g~~~~~Lvv~~e~~S~~~------------d--~~--------------------------------------- 150 (324)
...|++|..+.+|+++.|.+|... + |.
T Consensus 101 ~~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~y~~~~g~~~e~~a~va~~~~~~ 180 (389)
T PRK06364 101 YLAIKSGEYDVVMVGGVEKMTDIYGHEIIDVQSSILDREWESFNGATPAAMAAIIARRYMHDFNVEREAISMIAVNDHAN 180 (389)
T ss_pred HHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 99997297778999610003567776544445433330023303548999999999999999696999999999976563
Q ss_pred ----------CCC------------------CCCCCCCCCCEEEEECCCCCCCCCC-CCCCEEEEEECCCCCCCCEEECC
Q ss_conf ----------663------------------2323454431234402654465434-45410123203555556177548
Q gi|254780497|r 151 ----------DRS------------------TCVLFGDGAGALILEGVEVKGSSMA-DTGILSTYLCSDGSYIDKLYVDG 201 (324)
Q Consensus 151 ----------d~~------------------~~~lfGDGAaA~ll~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 201 (324)
++. .+....|||+|+||.+.+....... ...++......+. ...
T Consensus 181 A~~nP~A~~r~~~t~e~vl~s~~i~~Pl~~~d~s~~~DGAaAvVl~s~e~a~~~~~~~v~i~~~~~~~~~-----~~~-- 253 (389)
T PRK06364 181 ASRNPDAQYRNKITVKQVMNSDPVAEPLNVFDCSPISDGASAIILASEDFVKKNRKDGVRILSSAMAEDY-----LAL-- 253 (389)
T ss_pred HHHCCCCCCCCCCCHHHHHCCCCCCCCCCHHHCCCCCCCEEEEEEECHHHHHHCCCCCEEEEEEEEECCC-----CCC--
T ss_conf 7619601115776788862368767876074457788831799993389997568997599999996245-----555--
Q ss_pred CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH----HHH----
Q ss_conf 765444332001032024445577777778888987400100012102444441589999997197876----733----
Q gi|254780497|r 202 GPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD----KVI---- 273 (324)
Q Consensus 202 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~~---- 273 (324)
+ ..+. + ..........+++|+++|++++|||.+-+|-+--..--.+.|.||+.++ ++.
T Consensus 254 ~--~~~~----------~--~~~~~~~~A~~~A~~~AGl~~~DIDl~Ei~DaFa~~~l~~le~lG~~~~Ge~~~~~~~~~ 319 (389)
T PRK06364 254 H--SRKS----------I--YTLESTKIAARLALDRAGIKSDDVSFLELNDSYSIYGLLELEDLGFAEKGKAKDLVYDEI 319 (389)
T ss_pred C--CCCC----------C--CCCCCHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHCCCC
T ss_conf 7--7786----------5--445408999999999819997886177522655499999999809998773144315874
Q ss_pred -------HH----HHHHCCCHHHHHHHHHHHHHHC-------CCCCCCCEEEEEEEC-CCCCEEEEEE
Q ss_conf -------65----8651933012699999999980-------688999899999971-4501456878
Q gi|254780497|r 274 -------VT----VDIHGNTSAASIPLALAVAVKE-------GRVKKGDCLLLEAMG-GGFTSGTVLL 322 (324)
Q Consensus 274 -------~~----~~~~Gn~~sas~~~~L~~~~~~-------g~l~~Gd~vll~~~G-~G~s~~a~ll 322 (324)
.| +--+||-..++=...+.++..+ .+++.-.+.|....| .|.+....+|
T Consensus 320 ~~~G~~pvN~~GG~la~Ghp~gatG~~~~~ea~~QLrg~ag~rQv~~a~~al~~~~gG~g~~~~v~il 387 (389)
T PRK06364 320 KLNGRLPVNPSGGLKAKGNPLGATGVSQFVEAYLQLKGKAGQRQVKSARYGLLHNMAGTGATSVVHIV 387 (389)
T ss_pred CCCCCCEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEEEEEE
T ss_conf 46998437388178767993006799999999999702110346788669998167744210799996
No 55
>PRK08768 consensus
Probab=99.64 E-value=3.9e-14 Score=109.96 Aligned_cols=298 Identities=20% Similarity=0.240 Sum_probs=166.5
Q ss_pred CC-EEEEEEEEEECCCCEECHHHH-HHHH-CCCHH-HHHH--CCCCCEE-----------EEECCC-----CCHHHHHHH
Q ss_conf 92-269999999649841178899-9880-99987-8110--2475188-----------982898-----899999999
Q gi|254780497|r 1 MI-RSTVRGIGLSLPRRVLSNSDL-ESIV-DTSDG-WIKR--RVGISRR-----------HIAGKD-----ETTASLGEA 58 (324)
Q Consensus 1 M~-~~~I~~~g~ylP~~~v~~~el-~~~~-~~~~~-~i~~--~~GI~~R-----------~~~~~~-----e~~~~la~~ 58 (324)
|+ +|.|+|+|...|--. +.+++ .... +.+.- .+.+ ..+...+ .+..+. .....++..
T Consensus 1 M~rrVvITGmG~vtp~G~-~~~~~w~~L~~G~s~i~~~~~~d~~~~~~~~~g~i~~fd~~~~~~~~~~~~~d~~~~~~l~ 79 (411)
T PRK08768 1 MSRRVVVTGMGMVSPLGN-DLATSWDGIVHGRSGIGPITQIDASQFTTKIAGEIKNFDPTLFVSAKDVKKMDSFIHYGVG 79 (411)
T ss_pred CCCCEEEECCEEECCCCC-CHHHHHHHHHCCCCCEECCCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHCCHHHHHHHH
T ss_conf 989899987677897969-9999999998089855407756631487776554588792554899999756999999999
Q ss_pred HHHHHHHHHCCCCCCCCE----EEEECCCCC-----------------CCCC---------CCCCCHHHHHHCCCCCCCC
Q ss_conf 999999740212354433----665012233-----------------4589---------8531001122026864444
Q gi|254780497|r 59 AARDALHHAEMSVDDIDL----IIVATSTPD-----------------QTFP---------STAVNIQNRLGMKRGFAFD 108 (324)
Q Consensus 59 Aa~~al~~a~~~~~~Id~----ii~~s~~~~-----------------~~~p---------~~a~~i~~~LGl~~~~~~d 108 (324)
|+++||+++|+++++++. +++++.... ...| ..+.+|...+|++ .+++.
T Consensus 80 aa~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~g~~-Gp~~t 158 (411)
T PRK08768 80 ASFMALDDSGLEINESNAERVGAILGSGIGGLLGIEEQTIKFHEGGARKISPFYVPSTIINMLPGQVSLIKGLK-GPTFS 158 (411)
T ss_pred HHHHHHHHHCCCHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC-CCCCC
T ss_conf 99999774189900147655279992266653027899999985685546822556667668999999981998-97625
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCC-C---------------------CCCCC-CCCCCCCCCCCCEE
Q ss_conf 2101220034678889989641556531676302243-2---------------------22456-63232345443123
Q gi|254780497|r 109 MQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSR-I---------------------VDWSD-RSTCVLFGDGAGAL 165 (324)
Q Consensus 109 i~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~-~---------------------~d~~d-~~~~~lfGDGAaA~ 165 (324)
+..+|++++.||..|+.+|++|+.+.+++.++|.... . ..+.| ....+.+|+||+++
T Consensus 159 v~taCaS~l~Al~~A~~~i~~G~~d~~ivgg~~~~~~p~~~~~f~~l~~ls~~~~~P~~~~rPFd~~rdG~v~gEGa~~~ 238 (411)
T PRK08768 159 AVSACATSNHSIGTAMRMIQHGDADVMLAGGAERGSSPSSVGGFCAMKAMSTRNDDPTGASRPWDKQRDGFVLGDGAGVL 238 (411)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCEEEEE
T ss_conf 35411378899999999986788674552642021587889999986545203789887666665799986866804899
Q ss_pred EEECCCCCCCCCC--CCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 4402654465434--45410123203555556177548765444332001032024445577777778888987400100
Q gi|254780497|r 166 ILEGVEVKGSSMA--DTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIE 243 (324)
Q Consensus 166 ll~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~ 243 (324)
+|++.+....... ...+.+.-..+|+.. .. ....++ ......++++|++++++++
T Consensus 239 vLe~~e~A~~rga~i~a~i~g~~~~~d~~~----------~~-----~p~~~~--------~~~~~~~~~al~~a~~~~~ 295 (411)
T PRK08768 239 VLEEYEHAKARGARIYAELVGFGASSDAFH----------MT-----APSEDG--------EGAARSMAAAMRDAKLNPE 295 (411)
T ss_pred EECCHHHHHHCCCCEEEEEEEEEECCCCCC----------CC-----CCCCCH--------HHHHHHHHHHHHHCCCCCC
T ss_conf 971488898679907899977876147888----------87-----889777--------9999999999997698931
Q ss_pred CCCCCCCCCCCHHH-----HHHHHHHCCCCHHHH-H-HHHHHHCCCHHHHHHHHHHH---HHHCCCCCC-----------
Q ss_conf 01210244444158-----999999719787673-3-65865193301269999999---998068899-----------
Q gi|254780497|r 244 NIDWFVPHQANWRI-----INSIVDKMKIPFDKV-I-VTVDIHGNTSAASIPLALAV---AVKEGRVKK----------- 302 (324)
Q Consensus 244 did~~~~Hq~~~~~-----~~~~~~~lgl~~e~~-~-~~~~~~Gn~~sas~~~~L~~---~~~~g~l~~----------- 302 (324)
|||++-.|-.+-.. .+.+.+.++=...+. + .+=..+||+.+++=.+.+.. +++.+.+.|
T Consensus 296 ~i~yi~aHgtgT~~~D~~E~~ai~~~fg~~~~~~~i~s~Ks~~GH~~~aaG~~~~~~~~l~l~~~~ippt~n~~~p~~~~ 375 (411)
T PRK08768 296 QIGYLNAHGTSTPLGDLAETMAMKRALGDHAYKTMVSSTKSMTGHLLGAAGGVEAIFSVMALHTGIIPPTINLEEPSEGC 375 (411)
T ss_pred CEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 02489967566755399999999998567899874789445543208999999999999997169739999999999889
Q ss_pred -------------CCEEEEEEECCCCCEEEEEEE
Q ss_conf -------------989999997145014568786
Q gi|254780497|r 303 -------------GDCLLLEAMGGGFTSGTVLLR 323 (324)
Q Consensus 303 -------------Gd~vll~~~G~G~s~~a~llr 323 (324)
-..++.-+||=|=+-.+++||
T Consensus 376 ~l~~v~~~~~~~~~~~al~nsfGfGG~Na~lvl~ 409 (411)
T PRK08768 376 DLDYVPNVAREVQVDAVMSNGFGFGGTNGTLVFK 409 (411)
T ss_pred CCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEE
T ss_conf 8544899766687788999671177010899998
No 56
>TIGR03150 fabF 3-oxoacyl-[acyl-carrier-protein] synthase 2. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.63 E-value=6.8e-14 Score=108.44 Aligned_cols=297 Identities=20% Similarity=0.286 Sum_probs=166.8
Q ss_pred CEEEEEEEEEECCCCEECHHHHHH-HHC-CCH-HHHHH--CCCCCEEE---EE--CCCC-----------CHHHHHHHHH
Q ss_conf 226999999964984117889998-809-998-78110--24751889---82--8988-----------9999999999
Q gi|254780497|r 2 IRSTVRGIGLSLPRRVLSNSDLES-IVD-TSD-GWIKR--RVGISRRH---IA--GKDE-----------TTASLGEAAA 60 (324)
Q Consensus 2 ~~~~I~~~g~ylP~~~v~~~el~~-~~~-~~~-~~i~~--~~GI~~R~---~~--~~~e-----------~~~~la~~Aa 60 (324)
.+|.|+|+|.-+|.-. +.+++-+ ... .+. ..+.+ ..+...+. +. ++.+ ...-++.+++
T Consensus 1 rrVaItG~g~~~P~g~-~~~~~w~~L~~g~s~i~~~~~~d~~~~~~~~~g~v~~fd~~~~i~~~~a~~~dp~~~l~l~aa 79 (407)
T TIGR03150 1 RRVVVTGLGAVTPLGN-GVEEFWENLLAGKSGIGPITRFDASDLPVKIAGEVKDFDPEDYIDKKEARRMDRFIQYALAAA 79 (407)
T ss_pred CEEEEEECEEECCCCC-CHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEECCCCHHHCCCHHHHHHCCHHHHHHHHHH
T ss_conf 9399984677897979-999999999739974443687786468775677727889466589999975199999999999
Q ss_pred HHHHHHHCCCCCCCC----EEEEECCCC-----------------CCC----CCC-----CCCCHHHHHHCCCCCCCCCC
Q ss_conf 999974021235443----366501223-----------------345----898-----53100112202686444421
Q gi|254780497|r 61 RDALHHAEMSVDDID----LIIVATSTP-----------------DQT----FPS-----TAVNIQNRLGMKRGFAFDMQ 110 (324)
Q Consensus 61 ~~al~~a~~~~~~Id----~ii~~s~~~-----------------~~~----~p~-----~a~~i~~~LGl~~~~~~di~ 110 (324)
.+||+++|+.+++++ .|++++... ... .|. .+++|...+|++ .+++.+.
T Consensus 80 ~~Al~dAG~~~~~~~~~~~gv~~gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~is~~~~l~-Gp~~tv~ 158 (407)
T TIGR03150 80 KEAVEDSGLDIEEEDAERVGVIVGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAK-GPNHAVV 158 (407)
T ss_pred HHHHHHCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCC
T ss_conf 999986399844528664599992576745779999999985384445854015766258999999985999-9644644
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC-CC---------------------CCC-CCCCCCCCCCCCCCCEEEE
Q ss_conf 012200346788899896415565316763022-43---------------------222-4566323234544312344
Q gi|254780497|r 111 AVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF-SR---------------------IVD-WSDRSTCVLFGDGAGALIL 167 (324)
Q Consensus 111 ~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~-S~---------------------~~d-~~d~~~~~lfGDGAaA~ll 167 (324)
.+|+|++.||..|..+|++|+.+.+||.++|.. ++ ... |+.....+.+|+||+++||
T Consensus 159 taCsSsl~Al~~A~~~i~~G~~d~aivGG~~~~l~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~a~G~v~gEGa~~vvL 238 (407)
T TIGR03150 159 TACATGTHAIGDAFRLIQYGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDRDGFVMGEGAGVLVL 238 (407)
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 44389999999999998739854655037443579899999998877730678987776542247997445484578740
Q ss_pred ECCCCCCCCCCC--CCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 026544654344--541012320355555617754876544433200103202444557777777888898740010001
Q gi|254780497|r 168 EGVEVKGSSMAD--TGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENI 245 (324)
Q Consensus 168 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~di 245 (324)
++.+........ ..+.+.-..+|+.. ... ...++ ......++++|++++++++||
T Consensus 239 e~~~~A~~~g~~I~a~i~g~g~~~d~~~----------~t~-----~~p~~--------~~~~~~i~~al~~agi~~~~I 295 (407)
T TIGR03150 239 EELEHAKARGAKIYAEIVGYGMSGDAYH----------ITA-----PAPEG--------EGAARAMRAALKDAGINPEDV 295 (407)
T ss_pred CCHHHHHHCCCEEEEEEEEEEEECCCCC----------CCC-----CCCCC--------HHHHHHHHHHHHHHCCCCCCE
T ss_conf 6699998779968999821055015887----------646-----59981--------678889999999868998633
Q ss_pred CCCCCCCCCHHH-----HHHHHHHCCCCHHHH-H-HHHHHHCCCHHHHHHHHHHH---HHHCCCCCC-------------
Q ss_conf 210244444158-----999999719787673-3-65865193301269999999---998068899-------------
Q gi|254780497|r 246 DWFVPHQANWRI-----INSIVDKMKIPFDKV-I-VTVDIHGNTSAASIPLALAV---AVKEGRVKK------------- 302 (324)
Q Consensus 246 d~~~~Hq~~~~~-----~~~~~~~lgl~~e~~-~-~~~~~~Gn~~sas~~~~L~~---~~~~g~l~~------------- 302 (324)
|++-.|-.+-.. .+.+.+.++=...++ + .+=..+||+..++=.+.+-. .++.+.+.|
T Consensus 296 ~yIe~Hgtgt~~~D~~E~~al~~~fg~~~~~~~i~S~K~~~GH~~~AaG~~~lik~~l~l~~~~ipp~~n~~~~~~~~~~ 375 (407)
T TIGR03150 296 DYINAHGTSTPLGDKAETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECDL 375 (407)
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 49997368787769999999999862568986578855554314899999999999999825963898998999999984
Q ss_pred -----------CCEEEEEEECCCCCEEEEEEE
Q ss_conf -----------989999997145014568786
Q gi|254780497|r 303 -----------GDCLLLEAMGGGFTSGTVLLR 323 (324)
Q Consensus 303 -----------Gd~vll~~~G~G~s~~a~llr 323 (324)
-.+++..+||-|=+-.+++||
T Consensus 376 ~~v~~~~~~~~~~~al~~sfGfGG~Na~~vl~ 407 (407)
T TIGR03150 376 DYVPNEARERKIDYALSNSFGFGGHNASLVFK 407 (407)
T ss_pred CCCCCCCCCCCCCEEEEECCCCCCEEEEEEEC
T ss_conf 51889886788899999672367354899969
No 57
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=99.63 E-value=7.1e-14 Score=108.30 Aligned_cols=102 Identities=19% Similarity=0.145 Sum_probs=78.8
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC--CCCCCHHH-HHHCCCCCCCCCCCCCCCHHHH
Q ss_conf 89828988999999999999997402123544336650122334589--85310011-2202686444421012200346
Q gi|254780497|r 43 RHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFP--STAVNIQN-RLGMKRGFAFDMQAVCSGFVYA 119 (324)
Q Consensus 43 R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p--~~a~~i~~-~LGl~~~~~~di~~~C~~~~~a 119 (324)
|++..++.+..+|+.+|+++||+++|++|+|||.|++++..++.... .....+.. ..++....++-++.+|+++..+
T Consensus 17 r~~~~~~~~~~~L~~eA~~~Al~dAGl~~~dID~v~~G~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~v~~~caSG~~A 96 (408)
T PRK06289 17 RNWTKEGRDFADLTREVVDGTLAAAGIDADDIGVVHVGNFFGELFAGQGHLGAMPATVHPALWGTPASRHEAACASGSVA 96 (408)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCHHHHHH
T ss_conf 78887899999999999999999849998998999997415643445102566788764212588614463523899999
Q ss_pred HHHHHHHHHHCCCCCCEEEEECCCC
Q ss_conf 7888998964155653167630224
Q gi|254780497|r 120 VTTADSYIRSGVVRRVMVIGSDTFS 144 (324)
Q Consensus 120 l~~A~~li~~g~~~~~Lvv~~e~~S 144 (324)
+..|...|++|.++.+|+++.|.++
T Consensus 97 ~~~A~~~I~sG~~dvvla~G~e~ms 121 (408)
T PRK06289 97 TLAAIADLRSGAYDVALVVGLELEK 121 (408)
T ss_pred HHHHHHHHHCCCCCEEEEEEEEECC
T ss_conf 9999999974888779998888626
No 58
>PRK08371 consensus
Probab=99.62 E-value=1.1e-13 Score=107.09 Aligned_cols=274 Identities=19% Similarity=0.259 Sum_probs=160.5
Q ss_pred CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf 92269999999649841178899988099987811024751889828988999999999999997402123544336650
Q gi|254780497|r 1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVA 80 (324)
Q Consensus 1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~ 80 (324)
|.+|.|.|++.- |-. |+ .+.+..+|+.+|++++|+++|++ +||.++++
T Consensus 1 M~~v~IVg~~~T-p~g--------------------------r~---~~~~~~~L~~ea~~~Al~dAgi~--~iD~v~~g 48 (388)
T PRK08371 1 MEKVIIVGVGMT-PVG--------------------------EH---WRTSLRDLAVEAILKAMDDAGID--KVDSLYVG 48 (388)
T ss_pred CCCEEEEEEEEC-CCE--------------------------EC---CCCCHHHHHHHHHHHHHHHCCCC--HHHEEEEE
T ss_conf 981899996034-444--------------------------48---99898999999999999980998--33348991
Q ss_pred CCCCCCC--CCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC--------
Q ss_conf 1223345--898531001122026864444210122003467888998964155653167630224322245--------
Q gi|254780497|r 81 TSTPDQT--FPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWS-------- 150 (324)
Q Consensus 81 s~~~~~~--~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~-------- 150 (324)
+..+... ....+..++..+|+++..+..++.+|+|++.++..|...|++|..+.+|+++.|.+|+.....
T Consensus 49 ~~~~~~~~~~~~~~~~~a~~~Gl~~vp~~~v~~~caSg~~Ai~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~ 128 (388)
T PRK08371 49 NMASGSFIEQENLGALIADWAGLGNIPAVKVEAACASGGAAVQEGAKAVLSGLEDVVLVVGVEKMTDAWPSDATRYLAYA 128 (388)
T ss_pred CCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 35654222132399999997599998624666735789999999999998288988999867534678887530001245
Q ss_pred -CCC------------------------------------------------------------------------CCCC
Q ss_conf -663------------------------------------------------------------------------2323
Q gi|254780497|r 151 -DRS------------------------------------------------------------------------TCVL 157 (324)
Q Consensus 151 -d~~------------------------------------------------------------------------~~~l 157 (324)
|.. .+..
T Consensus 129 ~d~~~~~~~g~~~~~~~al~a~~~~~~yg~t~e~~a~vav~~~~~A~~np~A~~~~~~t~e~~~~s~~i~~pl~~~d~s~ 208 (388)
T PRK08371 129 ADAEWELFHGASFVALNALIMRLYMNTYGYTEEDLALFAVNAHANGAKNPYAMFKRPITVETVMKSPYIADPLKLFDASP 208 (388)
T ss_pred CCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCHHHHCCCC
T ss_conf 44440210483777789999999999958998883799996707676097560368865889614775457166634687
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 45443123440265446543445410123203555556177548765444332001032024445577777778888987
Q gi|254780497|r 158 FGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDS 237 (324)
Q Consensus 158 fGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~ 237 (324)
..|||+|+||.+.+..... ....-...++...+...+...+. .....+ .........+++|++
T Consensus 209 ~~DGAaAvvl~s~e~A~~~-g~~~~~~v~~~g~g~~~~~~~~~------~~~d~~----------~~~~~~~A~~~al~~ 271 (388)
T PRK08371 209 VCDGAAAVIITSPEKAKEL-GVPKDKWVEVAGMGRAIDTINLA------NREDLL----------TLKAAKIAAEKAYKM 271 (388)
T ss_pred CCCCHHHHHHCCHHHHHHC-CCCCCEEEEEEEEEECCCCCCCC------CCCCCC----------CCCHHHHHHHHHHHH
T ss_conf 7560687762389999865-99965289999998535655556------676333----------464599999999998
Q ss_pred HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH----HH------------HHH----HHHHCCCHHHH---HHHHHHHH
Q ss_conf 400100012102444441589999997197876----73------------365----86519330126---99999999
Q gi|254780497|r 238 THLTIENIDWFVPHQANWRIINSIVDKMKIPFD----KV------------IVT----VDIHGNTSAAS---IPLALAVA 294 (324)
Q Consensus 238 ~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~------------~~~----~~~~Gn~~sas---~~~~L~~~ 294 (324)
+|++++|||.+-+|-+--...-...+.|||.+. ++ +.| .--+||-..++ ....+.+-
T Consensus 272 AGl~~~DIDv~Ei~daFa~~~l~~le~lGl~~~Ge~~~~~~~g~~~~~G~~pvN~~GG~ls~Ghp~GatG~~~~~e~v~Q 351 (388)
T PRK08371 272 AGVEPKDIDFFEVHDAFTVMAALSLEALGVAEKGKGAKLAKEGQIAIDGDYPIQTMGGLKARGHPVGATGVYQTVEAVLQ 351 (388)
T ss_pred CCCCHHHCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 49998889477531433588999999849997882677886588456999628588169765986247799999999999
Q ss_pred HHC----C-CCCCCCEEEEEEECC-CCCEEEEEEE
Q ss_conf 980----6-889998999999714-5014568786
Q gi|254780497|r 295 VKE----G-RVKKGDCLLLEAMGG-GFTSGTVLLR 323 (324)
Q Consensus 295 ~~~----g-~l~~Gd~vll~~~G~-G~s~~a~llr 323 (324)
++. + +++.-+..|..+.|. |-....+++|
T Consensus 352 Lrg~ag~~~qv~~a~~~l~~~~gG~~~~~~v~il~ 386 (388)
T PRK08371 352 LRGEAPNGIQVPDAEVGLTQNIGGTGSNITVTILR 386 (388)
T ss_pred HHHHCCCCCCCCCCCEEEEECCCCCHHHEEEEEEE
T ss_conf 86200667226888699993567613428999997
No 59
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=99.62 E-value=2.5e-14 Score=111.24 Aligned_cols=100 Identities=17% Similarity=0.147 Sum_probs=85.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC-CCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 898899999999999999740212354433665012233-45898531001122026-8644442101220034678889
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPD-QTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTAD 124 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~-~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~ 124 (324)
-.+.++.+|++.+++.+|++++++|++||.+++++..+. ...+..+..+.-..|++ ..+++.|+..|+|++.|+..|.
T Consensus 21 l~~~~~~~L~a~ai~~~l~r~~i~p~~Id~vi~G~v~~~g~~~~n~aR~~~L~aGlp~~vpa~tVn~~CaSGl~Av~~A~ 100 (382)
T PRK07801 21 LAGVHPADLGAHVLRGLVDRNDIDPAAVDDVIFGCVDAIGPQAGNIARTSWLAAGYPEEVPGVTVDRQCGSSQQAIHFAA 100 (382)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHH
T ss_conf 79999999999999999998097989989899971666566556799999997699988864888412158999999999
Q ss_pred HHHHHCCCCCCEEEEECCCCCC
Q ss_conf 9896415565316763022432
Q gi|254780497|r 125 SYIRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 125 ~li~~g~~~~~Lvv~~e~~S~~ 146 (324)
..|++|..+.+|+++.|.+|+.
T Consensus 101 ~~I~~G~~dv~lagGvEsMS~~ 122 (382)
T PRK07801 101 QAIMSGTADVIVAGGVQNMSQI 122 (382)
T ss_pred HHHCCCCCCEEEECCEEECCCC
T ss_conf 8862899674665154322557
No 60
>PRK06158 thiolase; Provisional
Probab=99.60 E-value=2.5e-13 Score=104.81 Aligned_cols=248 Identities=18% Similarity=0.163 Sum_probs=150.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 89889999999999999974021235443366501223345898531001122026864444210122003467888998
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSY 126 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~l 126 (324)
.++.+..+|+.+|+++||+++|++|+|||.+++++... . .....+.+.||+++.....+..+|+++..++..|...
T Consensus 23 ~~~~s~~eL~~eA~~~Al~DAGi~~~dID~~~~g~~~~--~--~~g~~~a~~lGl~~~~~~~~~~ggas~~~al~~A~~a 98 (384)
T PRK06158 23 APGLSAMELLAQAAVRALADAGLTMADVDGLFTASPDS--A--LWGLSVAEYLGIRPRFVDGTMIGGSSFVSHLLPAALA 98 (384)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCC--C--CHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHH
T ss_conf 89979999999999999997599999909899971576--6--5399999982999812436666868999999999999
Q ss_pred HHHCCCCCCEEEEECCCCCC-------CC---------------------------------------------------
Q ss_conf 96415565316763022432-------22---------------------------------------------------
Q gi|254780497|r 127 IRSGVVRRVMVIGSDTFSRI-------VD--------------------------------------------------- 148 (324)
Q Consensus 127 i~~g~~~~~Lvv~~e~~S~~-------~d--------------------------------------------------- 148 (324)
|++|.++.+||+..+..+.. .+
T Consensus 99 I~sG~~d~vlV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~~~Al~a~rym~~yG~t~E~lA~vavk~r~nA~~NP~ 178 (384)
T PRK06158 99 LEAGLCDVALICYGSNQRSAGGKLVSMLDPQPYEAPYKPVNPVTAYALAAARHMHQYGTTREQLAEVAVAARQWAQLNPE 178 (384)
T ss_pred HHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 98588538999523555556655433568744443235554688999999999999798899999999999998706986
Q ss_pred --CCCCC------------------CCCCCCCCCCEEEEECCCCCCCCCCCCCC--EEEEEECCCCCCCCEEECCCCCCC
Q ss_conf --45663------------------23234544312344026544654344541--012320355555617754876544
Q gi|254780497|r 149 --WSDRS------------------TCVLFGDGAGALILEGVEVKGSSMADTGI--LSTYLCSDGSYIDKLYVDGGPSTS 206 (324)
Q Consensus 149 --~~d~~------------------~~~lfGDGAaA~ll~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 206 (324)
+..+- -+...+|||+|+||.+.+... ...+..+ ...-..++.
T Consensus 179 A~~r~~it~edvl~s~~Ia~PL~l~dc~~~sDGAaAvVl~s~e~Ar-~l~~~pV~i~g~g~~~~~--------------- 242 (384)
T PRK06158 179 AFMRDPLTIDDVLAARMVSDPLSVRDCCLVTDGAGAVVMVRADRAR-DLPRPPVYVLGAAAATWH--------------- 242 (384)
T ss_pred CCCCCCCCHHHHHCCCCCCCCHHHCCCCCCCCCEEEEEEECHHHHH-HCCCCCEEEEEEEEECCC---------------
T ss_conf 3137887999972153545660011466566634899995288884-479995799999986168---------------
Q ss_pred CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH----HHH---------
Q ss_conf 4332001032024445577777778888987400100012102444441589999997197876----733---------
Q gi|254780497|r 207 RTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD----KVI--------- 273 (324)
Q Consensus 207 ~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~~--------- 273 (324)
...... ..+ .........+++++++|++++|||.+-+|-.-...--.+.|.||+-+. +++
T Consensus 243 --~~~~~~--~d~---~~~~~~~aa~~A~~~AGi~p~DiDvaev~D~Ft~~~l~~~E~lG~~~~Ge~~~~v~~G~~~~~G 315 (384)
T PRK06158 243 --RQISSM--PDL---TVTAAAESGPRAFAMAGVTPADIDVVELYDAFTINTILFLEDLGFCAKGEGGAFVEGGRIAPGG 315 (384)
T ss_pred --CCCCCC--CCC---CHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCC
T ss_conf --764335--521---0279999999999980999777878864177608899999984999898469999779956799
Q ss_pred ---HH----HHHHCCCHHHHHHHHHHHHHHC-------CCCCCCCEEEEEEEC-CCCCEEEEEE
Q ss_conf ---65----8651933012699999999980-------688999899999971-4501456878
Q gi|254780497|r 274 ---VT----VDIHGNTSAASIPLALAVAVKE-------GRVKKGDCLLLEAMG-GGFTSGTVLL 322 (324)
Q Consensus 274 ---~~----~~~~Gn~~sas~~~~L~~~~~~-------g~l~~Gd~vll~~~G-~G~s~~a~ll 322 (324)
.| +--+||.+.. =+..+.++.++ .+++.-+..|..+.| .+.+..+++|
T Consensus 316 ~~PvN~sGGlls~GhpGat-G~~~~~E~~~QLrG~ag~rQV~~a~~al~~~~GG~~~~~~~~vL 378 (384)
T PRK06158 316 RLPVNTNGGGLSCVHPGMY-GLFLIIEAVRQLRGEAGERQVAGAEVALAHGNGGVLSSQATAIL 378 (384)
T ss_pred CEEECCCCHHHCCCCCHHH-HHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEE
T ss_conf 7415379701238996177-99999999999617756675898778999688862211599998
No 61
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.60 E-value=3e-14 Score=110.73 Aligned_cols=99 Identities=18% Similarity=0.221 Sum_probs=84.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 98899999999999999740212354433665012233458985310011220268-64444210122003467888998
Q gi|254780497|r 48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTADSY 126 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~~l 126 (324)
++.++.+|+..+++++|++++++|++||.||++.+.+...-+..+.++.=..|++. ..++.|+..|.|++.|+..|...
T Consensus 27 ~~~~~~~L~a~~i~~~l~r~~~~~~~Id~vi~G~~~~~g~g~n~aR~~~L~aGlp~~vpa~tVnr~C~SGl~Ai~~a~~~ 106 (397)
T PRK06954 27 ASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHDM 106 (397)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHH
T ss_conf 89999999999999999873989899798999823655656649999999769998887788726658999999999999
Q ss_pred HHHCCCCCCEEEEECCCCCC
Q ss_conf 96415565316763022432
Q gi|254780497|r 127 IRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 127 i~~g~~~~~Lvv~~e~~S~~ 146 (324)
|++|..+.+|+++.|.+|+.
T Consensus 107 I~sG~~dvvlagGvEsmS~~ 126 (397)
T PRK06954 107 LVAGSVDVIVAGGMESMTNA 126 (397)
T ss_pred HHCCCCCEEEEECCCCCCCC
T ss_conf 96799745676334456767
No 62
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.59 E-value=1.8e-13 Score=105.73 Aligned_cols=291 Identities=16% Similarity=0.223 Sum_probs=158.3
Q ss_pred CCEEEEEEEEEECCCCEECHHHHHH-HH-CCCHHH-HHHCCCCCEEE----EECCCC------------CHHHHHHHHHH
Q ss_conf 9226999999964984117889998-80-999878-11024751889----828988------------99999999999
Q gi|254780497|r 1 MIRSTVRGIGLSLPRRVLSNSDLES-IV-DTSDGW-IKRRVGISRRH----IAGKDE------------TTASLGEAAAR 61 (324)
Q Consensus 1 M~~~~I~~~g~ylP~~~v~~~el~~-~~-~~~~~~-i~~~~GI~~R~----~~~~~e------------~~~~la~~Aa~ 61 (324)
|++|.|+|+|..-|-- .+.+++-+ .. +.+... +.+.-...... +.++++ ....++..|++
T Consensus 2 m~rVvITGiGivsplG-~~~~~~w~~L~~G~s~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~~l~~~~~R~~~~a~~A~~ 80 (395)
T PRK09185 2 MTPVYITAFGATSALG-AGLDAILAALRAGRASGMRPCDFGWLPLPTWVGEVDGVDLPALPAALADFDCRNNRLALLALQ 80 (395)
T ss_pred CCCEEEECHHHCCCCC-CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCHHHHHHHHHHH
T ss_conf 9869994620048780-899999999984898764676666557882278746855443727776323577799999999
Q ss_pred H---HHHHH--CCCCCCCCEEEEECCC------------------C-CCCC----C-CCCCCHHHHHHCCCCCCCCCCCC
Q ss_conf 9---99740--2123544336650122------------------3-3458----9-85310011220268644442101
Q gi|254780497|r 62 D---ALHHA--EMSVDDIDLIIVATST------------------P-DQTF----P-STAVNIQNRLGMKRGFAFDMQAV 112 (324)
Q Consensus 62 ~---al~~a--~~~~~~Id~ii~~s~~------------------~-~~~~----p-~~a~~i~~~LGl~~~~~~di~~~ 112 (324)
+ ++..+ ..+++.+++++-.+.. | ++.. | +.+..|+..+|++ .+++.++.+
T Consensus 81 ~~~~a~~~a~~~~~~~riGvviGts~gg~~~~e~~~~~~~~~~~~p~~~~~~~~~~~~~a~~Ia~~~gl~-Gp~~t~~~A 159 (395)
T PRK09185 81 QIEPAVEAAIARYGADRIGVVLGTSTSGILEGEEAYARRDPHGAFPADFHYAQQELGSPADFLRAYLGLS-GPAYTISTA 159 (395)
T ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCEEECCC
T ss_conf 9999985205334987689999547011899999999972379888751100025014999999996898-963200144
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC---------------CCCCCC-CCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 2200346788899896415565316763022432---------------224566-323234544312344026544654
Q gi|254780497|r 113 CSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRI---------------VDWSDR-STCVLFGDGAGALILEGVEVKGSS 176 (324)
Q Consensus 113 C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~---------------~d~~d~-~~~~lfGDGAaA~ll~~~~~~~~~ 176 (324)
|++++.||..|+++|+.|..+.+++.++|..++. .++.|+ ...+.+|+||++++||+.+.....
T Consensus 160 CaSg~~Ai~~A~~~I~~G~~d~~i~Gg~d~l~~~~~~~f~~~~~ls~~~~rPFd~~r~G~v~gEGa~~~vLE~~~~a~~~ 239 (395)
T PRK09185 160 CSSSAKVFASARRLLEAGLCDAVIVGGVDSLCRLTLNGFNSLESLSPGPCQPFSANRDGINIGEAAAFFLLRPATRDDAA 239 (395)
T ss_pred CCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECEEEEEEECHHHCCCCC
T ss_conf 60899999999999985998889980212245520578776422466788765579997365056899997455629997
Q ss_pred CCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
Q ss_conf 34454101232035555561775487654443320010320244455777777788889874001000121024444415
Q gi|254780497|r 177 MADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWR 256 (324)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~ 256 (324)
..+......+|+.+. .....+| ......++++|++++++++||||+..|-.+-.
T Consensus 240 ---~~~~G~~~~~da~~~---------------~~p~p~g--------~g~~~am~~Al~~a~~~~~di~yv~aHgtgT~ 293 (395)
T PRK09185 240 ---VLLLGVGESSDAHHM---------------SAPHPEG--------LGARLAMQAALADAGLEAADIGYINLHGTATP 293 (395)
T ss_pred ---EEEEEEEECCCCCCC---------------CCCCCCH--------HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCC
T ss_conf ---899998851677777---------------7889888--------99999999999973999343666996167686
Q ss_pred H-----HHHHHHHCCCCHHHH-H-HHHHHHCCCHHHHHHH----HHHHHHHCCCCC------------------------
Q ss_conf 8-----999999719787673-3-6586519330126999----999999806889------------------------
Q gi|254780497|r 257 I-----INSIVDKMKIPFDKV-I-VTVDIHGNTSAASIPL----ALAVAVKEGRVK------------------------ 301 (324)
Q Consensus 257 ~-----~~~~~~~lgl~~e~~-~-~~~~~~Gn~~sas~~~----~L~~~~~~g~l~------------------------ 301 (324)
. .+.+.+.+| ++. + .+=..+||+-.++=.+ .+-.+.+++.+.
T Consensus 294 ~~D~~E~~Ai~~vfg---~~~pvss~Ks~~GH~lgaaG~~e~~~~~l~l~~~~~iPpt~n~~~~dp~~~~~~v~~~~~~~ 370 (395)
T PRK09185 294 LNDAMESRAVAAVFG---DTVPCSSTKPLTGHTLGAAGAVEAAICWLALNRDLPLPGHVNDGQPDPALPPLYLVENRQAL 370 (395)
T ss_pred CCCHHHHHHHHHHHC---CCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 658999999999848---88624676411043078899999999999998289859989999989888765468887568
Q ss_pred CCCEEEEEEEC-CCCCEEEEEEE
Q ss_conf 99899999971-45014568786
Q gi|254780497|r 302 KGDCLLLEAMG-GGFTSGTVLLR 323 (324)
Q Consensus 302 ~Gd~vll~~~G-~G~s~~a~llr 323 (324)
+-+.+|.-+|| .|... +++|+
T Consensus 371 ~~~~~l~nsfGFGG~Na-~lvl~ 392 (395)
T PRK09185 371 ALRYVMSNSFAFGGSNC-SLIFG 392 (395)
T ss_pred CCCEEEEECCCCCCEEE-EEEEE
T ss_conf 98899995614883626-89984
No 63
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=99.57 E-value=8.7e-14 Score=107.75 Aligned_cols=100 Identities=21% Similarity=0.201 Sum_probs=84.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHH-CCCCCCCCEEEEECCCCCCCC-CCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 898899999999999999740-212354433665012233458-985310011220268644442101220034678889
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHA-EMSVDDIDLIIVATSTPDQTF-PSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTAD 124 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a-~~~~~~Id~ii~~s~~~~~~~-p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~ 124 (324)
-++.++.||+..+++.+|++. +++|++||-||++++.+.... ...+..+.-..|++..+++.|+..|.|++.|+..|.
T Consensus 22 l~~~~~~~L~a~~i~~~l~r~~~l~p~~Id~Vi~G~~~~~g~~g~n~aR~aaL~aGl~~vpa~TVnr~C~SGl~Ai~~aa 101 (405)
T PRK07851 22 LVDMRPDDLAAQMVRAALDKVPALDPHDIDDLMLGCGLPGGESGFNIARVVAVLLGYDFLPGTTVNRYCSSSLQTTRMAF 101 (405)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHH
T ss_conf 89999999999999999986679798998989998377546432309999999739999863457560205799999999
Q ss_pred HHHHHCCCCCCEEEEECCCCCC
Q ss_conf 9896415565316763022432
Q gi|254780497|r 125 SYIRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 125 ~li~~g~~~~~Lvv~~e~~S~~ 146 (324)
..|++|..+-+|+.+.|.+|+.
T Consensus 102 ~~I~~G~~dvvlAGGvEsMS~~ 123 (405)
T PRK07851 102 HAIKAGEGDAFISAGVETVSRF 123 (405)
T ss_pred HHHHCCCCCEEEEECCCCCCCC
T ss_conf 9997699998999681715567
No 64
>PRK07491 consensus
Probab=99.57 E-value=7.4e-14 Score=108.21 Aligned_cols=100 Identities=19% Similarity=0.259 Sum_probs=85.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 89889999999999999974021235443366501223345898531001122026-86444421012200346788899
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADS 125 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~ 125 (324)
-++.++.+|+..+++.+|+|++++|++||-||++++.+.-.-+..+..+.-..|++ ...++.|+..|+|++.++..|..
T Consensus 22 l~~~~~~~L~~~~i~~~l~r~~l~~~~Id~Vi~G~v~~~g~g~n~aR~~~L~aGlp~~vp~~tVnr~C~SGl~Ai~~Aa~ 101 (392)
T PRK07491 22 FANTPAHELGAVAIKAALERAGVDAADVSEVILGQVLTAGQGQNPARQASIKAGLPQESPAWGINQLCGSGLRAVALGAQ 101 (392)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHH
T ss_conf 79999999999999999987197989989899994575565561999999976989888648980603457789999999
Q ss_pred HHHHCCCCCCEEEEECCCCCC
Q ss_conf 896415565316763022432
Q gi|254780497|r 126 YIRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 126 li~~g~~~~~Lvv~~e~~S~~ 146 (324)
.|++|..+-+|+.+.|.+|+.
T Consensus 102 ~I~~G~~dvvlagGvEsmS~~ 122 (392)
T PRK07491 102 QIANGDAKIVVAGGQESMSMA 122 (392)
T ss_pred HHCCCCCCEEEEECCCCCCCC
T ss_conf 865898646776324423556
No 65
>PRK08041 consensus
Probab=99.57 E-value=8.5e-14 Score=107.80 Aligned_cols=100 Identities=17% Similarity=0.210 Sum_probs=86.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 898899999999999999740212354433665012233458985310011220268-6444421012200346788899
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTADS 125 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~~ 125 (324)
-.+.++.||+..+++.+|+|++++|++||-||+++..+....+..+..+.-..|++. ..++.|+..|.|++.|+..|..
T Consensus 21 l~~~~~~~L~a~~ik~~l~r~gi~~~~ID~vi~G~v~~~g~g~n~aR~~al~aGlp~~vpa~tVnr~C~SGl~Ai~~Aa~ 100 (391)
T PRK08041 21 LARHSAVELGSLVVKALIERTGVPAYAVDEVILGQVLTAGAGQNPARQSAIKGGLPNSVSAITINDVCGSGLKALHLATQ 100 (391)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHH
T ss_conf 78999999999999999998198989989899980576565665999999976999888717875165687899999999
Q ss_pred HHHHCCCCCCEEEEECCCCCC
Q ss_conf 896415565316763022432
Q gi|254780497|r 126 YIRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 126 li~~g~~~~~Lvv~~e~~S~~ 146 (324)
.|++|..+.+|+.+.|.+|+.
T Consensus 101 ~I~~G~~dvvlagGvEsmS~~ 121 (391)
T PRK08041 101 AIQCGEADIVIAGGQENMSRA 121 (391)
T ss_pred HHHCCCCCEEEEEEEECCCCC
T ss_conf 986799766777412214658
No 66
>PRK06363 consensus
Probab=99.57 E-value=5.5e-13 Score=102.66 Aligned_cols=201 Identities=20% Similarity=0.216 Sum_probs=128.8
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC--CCCCCCHHHHHHCCC--CCCCCCCCCCCCHHHHHHHHH
Q ss_conf 8899999999999999740212354433665012233458--985310011220268--644442101220034678889
Q gi|254780497|r 49 DETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTF--PSTAVNIQNRLGMKR--GFAFDMQAVCSGFVYAVTTAD 124 (324)
Q Consensus 49 ~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~--p~~a~~i~~~LGl~~--~~~~di~~~C~~~~~al~~A~ 124 (324)
+.+..+|+.+|++.+|++++++|+|||.+++++.+.+... ...+..++..+|+.. .++..++.+|++++.++..|.
T Consensus 19 ~~s~~~L~~ea~~~Al~dAgl~~~dID~v~~g~~~~~~~~~~~~~~~~~a~~~Gl~~~~vp~~~v~~~C~SG~~Ai~~Aa 98 (387)
T PRK06363 19 ERSFRDLIVEAGIKAIEDANVSGEDIDAMYVGNMSGGRFVGQEHIGALIADYAGLNTLPIPATRVEAACASGGLALRQAV 98 (387)
T ss_pred CCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHH
T ss_conf 97989999999999999809798999999998257543446130999999973998887654888663179999999999
Q ss_pred HHHHHCCCCCCEEEEECCCCCCCCCC------------CCC---------------------------------------
Q ss_conf 98964155653167630224322245------------663---------------------------------------
Q gi|254780497|r 125 SYIRSGVVRRVMVIGSDTFSRIVDWS------------DRS--------------------------------------- 153 (324)
Q Consensus 125 ~li~~g~~~~~Lvv~~e~~S~~~d~~------------d~~--------------------------------------- 153 (324)
..|++|.++.+|+.+.|.+|+.-+.. .+.
T Consensus 99 ~~I~sG~~dvvlagG~E~ms~~~~~~~~~~~~~d~~~~~~~g~~~~~~~a~~a~~~~~~yG~tre~~a~~A~~s~~~A~~ 178 (387)
T PRK06363 99 LAVASGYHDIVLAAGVEKMTDVGDATSALATAADREWEAFVGATFPSLYAMIAKRHMHEYGTTREQLAQVAVKNHENGAK 178 (387)
T ss_pred HHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
T ss_conf 99974998689996013677887655422224453520013775189999999999999796999999999981664542
Q ss_pred ----------------------------CCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCC
Q ss_conf ----------------------------2323454431234402654465434454101232035555561775487654
Q gi|254780497|r 154 ----------------------------TCVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPST 205 (324)
Q Consensus 154 ----------------------------~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (324)
.+....|||+|+||.+.+.... .....+ +...-+...+...+.. .
T Consensus 179 np~a~~~~~~t~d~~~~~~~i~~pl~~~d~s~~sDGAaAvvl~s~e~A~~-~~~~pv---~i~g~~~~~~~~~~~~---~ 251 (387)
T PRK06363 179 NPYAQFRNEITVDQVLNSSMVADPLRLLDCSPVSDGAAAVIVCPAEKARE-YTDTPI---YIKASAQASDTIALHD---R 251 (387)
T ss_pred CCCCCCCCCCCHHHHCCCCCCCCCCHHHHCCCCCCCCEEEEECCHHHHHH-CCCCCE---EEEEEEEEECCCCCCC---C
T ss_conf 85001578754755226665666531555246688834899715999986-599957---9999999835544567---8
Q ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCH
Q ss_conf 4433200103202444557777777888898740010001210244444158999999719787
Q gi|254780497|r 206 SRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPF 269 (324)
Q Consensus 206 ~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~ 269 (324)
+ ... ........++++++++|++++|||.+=+|-+-...--...+.||+.+
T Consensus 252 -~--~~~----------~~~~~~~a~~~a~~~AGl~~~DiD~~Ei~eaFa~~~l~~~e~lGl~~ 302 (387)
T PRK06363 252 -K--DIT----------TLDATVVASKKAYEMAGLTPKDIDVAEVHDCFTIAELCAIEDLGFCK 302 (387)
T ss_pred -C--CCC----------CCCHHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHHHHHHHCCCCC
T ss_conf -8--644----------57716999999999849998887576411101688999999819985
No 67
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.57 E-value=9.9e-14 Score=107.40 Aligned_cols=98 Identities=15% Similarity=0.162 Sum_probs=80.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHC-CCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 988999999999999997402123544336650122334589853100112202-6864444210122003467888998
Q gi|254780497|r 48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGM-KRGFAFDMQAVCSGFVYAVTTADSY 126 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl-~~~~~~di~~~C~~~~~al~~A~~l 126 (324)
....+.||+.+|++.+|+++|++|++||.||+++..+.......+.++.-..|+ ...+++.|+.+|+|++.|+..|...
T Consensus 19 ~~~~a~eL~~~ai~~al~~agi~~~~Id~vi~G~~~~~g~g~n~ar~~~l~ag~~~~vp~~tV~~~CaSG~~Ai~~A~~~ 98 (393)
T cd00826 19 ANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQEAPAIGMNNLCGSGLRALALAMQL 98 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 78999999999999999982969899898999925875555419999999759998997688768478999999999999
Q ss_pred HHHCCCCCCEEEEECCCCC
Q ss_conf 9641556531676302243
Q gi|254780497|r 127 IRSGVVRRVMVIGSDTFSR 145 (324)
Q Consensus 127 i~~g~~~~~Lvv~~e~~S~ 145 (324)
|++|..+.+|+++.|.+|.
T Consensus 99 I~sG~~dvvlagGvEsms~ 117 (393)
T cd00826 99 IAGGDANCILAGGFEKMET 117 (393)
T ss_pred HHCCCCCEEEEEEEEECCC
T ss_conf 9769999899950550676
No 68
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=99.56 E-value=6.4e-14 Score=108.60 Aligned_cols=100 Identities=18% Similarity=0.185 Sum_probs=87.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 898899999999999999740212354433665012233458985310011220268-6444421012200346788899
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTADS 125 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~~ 125 (324)
-.+.++.+|+..+++.+|++++++|++||.||++++.+...-+..+.++.-..|++. ..++.|+..|+|++.|+..|..
T Consensus 21 l~~~~~~~L~~~~i~~~l~~~gl~~~~Id~vi~G~v~~~~~g~n~ar~~al~aGlp~~vp~~tVnr~C~Sgl~Ai~~A~~ 100 (388)
T PRK06366 21 FSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAAR 100 (388)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf 68899899999999999987198989989899995275455651999999975999888658885725599999999999
Q ss_pred HHHHCCCCCCEEEEECCCCCC
Q ss_conf 896415565316763022432
Q gi|254780497|r 126 YIRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 126 li~~g~~~~~Lvv~~e~~S~~ 146 (324)
.|++|..+.+|+.+.|.+|+.
T Consensus 101 ~I~sG~~dvviagGvEsMS~~ 121 (388)
T PRK06366 101 EIMLGERDLVIAGGMENMSNA 121 (388)
T ss_pred HHHCCCCCEEEEECCCCCCCC
T ss_conf 996699876787042214578
No 69
>PRK07124 consensus
Probab=99.56 E-value=3.5e-14 Score=110.30 Aligned_cols=99 Identities=24% Similarity=0.285 Sum_probs=87.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 9889999999999999974021235443366501223345898531001122026-864444210122003467888998
Q gi|254780497|r 48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADSY 126 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~l 126 (324)
.+.++.||+.++++++|++++++|++||.||+++..+....+..+.++.-..|++ ..+++.|+..|+|++.|+..|...
T Consensus 22 ~~~~~~~L~~~ai~~al~~~~i~~~~Id~vi~G~v~~~g~g~n~ar~~al~aGlp~~iP~~tV~~aCaSG~~Ai~~A~~~ 101 (402)
T PRK07124 22 KSVPAGELAGVAIKGALEQAKVSPEAIDEVIVGNVVSAGQGMGPGRQAAIFAGIPEEVPAYSLNMVCGSGMKTVMDAVSH 101 (402)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHH
T ss_conf 89999999999999999983989899998999934755556679999999769998885699725778999999999999
Q ss_pred HHHCCCCCCEEEEECCCCCC
Q ss_conf 96415565316763022432
Q gi|254780497|r 127 IRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 127 i~~g~~~~~Lvv~~e~~S~~ 146 (324)
|++|.++.+|+++.|.+|+.
T Consensus 102 I~sG~~dvvlagGvEsmS~~ 121 (402)
T PRK07124 102 IKAGDAEVVVAAGVEVMSQI 121 (402)
T ss_pred HHCCCCCEEEECCEECCCCC
T ss_conf 86799767896551015667
No 70
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.56 E-value=9.4e-13 Score=101.14 Aligned_cols=293 Identities=20% Similarity=0.232 Sum_probs=163.7
Q ss_pred EEEEEEEEEECCCCE--ECHHHH-HHHHCCCHHH--HHH-CCCCCEEEEEC-------CC---------CCHHHHHHHHH
Q ss_conf 269999999649841--178899-9880999878--110-24751889828-------98---------89999999999
Q gi|254780497|r 3 RSTVRGIGLSLPRRV--LSNSDL-ESIVDTSDGW--IKR-RVGISRRHIAG-------KD---------ETTASLGEAAA 60 (324)
Q Consensus 3 ~~~I~~~g~ylP~~~--v~~~el-~~~~~~~~~~--i~~-~~GI~~R~~~~-------~~---------e~~~~la~~Aa 60 (324)
+|.|+|+|...|--. -+.+++ .....-.... +.+ .... .+++.. +. ....-|+.+++
T Consensus 2 RVvItGiG~~~P~G~g~~~~~~fW~~L~~G~s~i~~~~~~~~~~-~~~~~g~v~~~~~~~~~~~~~~~~d~~~~~~l~aa 80 (407)
T cd00828 2 RVVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLKSRF-DRGVAGQIPTGDIPGWDAKRTGIVDRTTLLALVAT 80 (407)
T ss_pred CEEEEECEEECCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCC-CCEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHH
T ss_conf 29998171889798898999999999976997645898554678-72386647887735589889874599999999999
Q ss_pred HHHHHHHCCCCC------CCCEEEEECCCCC-----------------CCC------C-CCCCCHHHHHHCCCCCCCCCC
Q ss_conf 999974021235------4433665012233-----------------458------9-853100112202686444421
Q gi|254780497|r 61 RDALHHAEMSVD------DIDLIIVATSTPD-----------------QTF------P-STAVNIQNRLGMKRGFAFDMQ 110 (324)
Q Consensus 61 ~~al~~a~~~~~------~Id~ii~~s~~~~-----------------~~~------p-~~a~~i~~~LGl~~~~~~di~ 110 (324)
++||+++|+++. ++. |++++...+ +.. | ..++++...+++.+.+++.+.
T Consensus 81 ~~Al~dAGl~~~~~~~~~r~g-v~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~~Gp~~tv~ 159 (407)
T cd00828 81 EEALADAGITDPYEVHPSEVG-VVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLSSHGPIKTPV 159 (407)
T ss_pred HHHHHHCCCCCHHHCCCCCEE-EEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCEE
T ss_conf 999996799964552787669-9999677438889988776554058732502301422488999998587889852650
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC---------------------CCCCC-CCCCCCCCCCCCEEEEE
Q ss_conf 012200346788899896415565316763022432---------------------22456-63232345443123440
Q gi|254780497|r 111 AVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRI---------------------VDWSD-RSTCVLFGDGAGALILE 168 (324)
Q Consensus 111 ~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~---------------------~d~~d-~~~~~lfGDGAaA~ll~ 168 (324)
.+|+|++.||..|+.+|++|+++.+++.++|..+.. ..+.| ....+..|+||+++||+
T Consensus 160 tACaSsl~Ai~~A~~~I~~G~~d~aivGg~~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~rdG~v~gEGa~~lvLe 239 (407)
T cd00828 160 GACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDETRDGFVEAEGAGVLVLE 239 (407)
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEECCCCEEEEEE
T ss_conf 35079999999996662368514466431223563667999874454227899887513036678986834852177650
Q ss_pred CCCCCCCCCC--CCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 2654465434--45410123203555556177548765444332001032024445577777778888987400100012
Q gi|254780497|r 169 GVEVKGSSMA--DTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENID 246 (324)
Q Consensus 169 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did 246 (324)
+.+....... ...+......+|+... ..... .+...+.++++|++++++++||+
T Consensus 240 ~~~~A~~rg~~i~a~i~g~~~~~dg~~~----------------~~~~~--------~~~~~~~~~~Al~~A~i~~~~i~ 295 (407)
T cd00828 240 RAELALARGAPIYGRVAGTASTTDGAGR----------------SVPAG--------GKGIARAIRTALAKAGLSLDDLD 295 (407)
T ss_pred EHHHHHHCCCEEEEEECCEEEECCCCCC----------------CCCCC--------CHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 4866766889799964364786689888----------------77986--------26789999999997199954563
Q ss_pred CCCCCCCCHHH-----HHHHHHHCCCCHHHH--HHHHHHHCCCHHHHHHHHHHHHH---HCCCCCC--------------
Q ss_conf 10244444158-----999999719787673--36586519330126999999999---8068899--------------
Q gi|254780497|r 247 WFVPHQANWRI-----INSIVDKMKIPFDKV--IVTVDIHGNTSAASIPLALAVAV---KEGRVKK-------------- 302 (324)
Q Consensus 247 ~~~~Hq~~~~~-----~~~~~~~lgl~~e~~--~~~~~~~Gn~~sas~~~~L~~~~---~~g~l~~-------------- 302 (324)
++-.|-.+-.. .+.+.+.++-..++. -.+=..+||+.+++=.+.+-..+ +.+.+.|
T Consensus 296 yI~aHgtgT~~gD~~E~~Al~~~f~~~~~~~~i~S~K~~~GH~~~aaG~~~li~~~l~l~~~~ippt~n~~~~~p~~~~~ 375 (407)
T cd00828 296 VISAHGTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVEHL 375 (407)
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 89951676866699999999998621378870445012303167899999999999998439719999989999765613
Q ss_pred ------------CCEEEEEEECCCCCEEEEE
Q ss_conf ------------9899999971450145687
Q gi|254780497|r 303 ------------GDCLLLEAMGGGFTSGTVL 321 (324)
Q Consensus 303 ------------Gd~vll~~~G~G~s~~a~l 321 (324)
-++++..+||-|-+-.+++
T Consensus 376 ~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lv 406 (407)
T cd00828 376 SVVGLSRDLNLKVRAALVNAFGFGGSNAALV 406 (407)
T ss_pred CCCCCCCCCCCCCCEEEEECCCCCCEEEEEE
T ss_conf 3777687688999799997835680507896
No 71
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.54 E-value=2.7e-12 Score=98.23 Aligned_cols=250 Identities=20% Similarity=0.181 Sum_probs=150.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC--CCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 988999999999999997402123544336650122334589--853100112202686444421012200346788899
Q gi|254780497|r 48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFP--STAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADS 125 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p--~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~ 125 (324)
++.+..+|+.+|+++||+++|++|+|||.+++++. ++.... .....+.+.||+.....+.+..+|+++..+++.|..
T Consensus 21 ~~~s~~~L~~eA~~~Al~DAGl~~~dID~~~~g~~-~~~~~g~~~~~~~~~~~lG~~~~p~~~v~~~~asg~~a~~~A~~ 99 (391)
T PRK08313 21 QDVSMAGLVREAIDRALADAGLTFDDIDAVVVGKA-PDFFEGVMMPELFLADAIGATGKPLIRVHTAGSVGGSTAVVAAS 99 (391)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECC-CCCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHH
T ss_conf 99799999999999999974999899899999765-76455543557899997078788437882531789999999999
Q ss_pred HHHHCCCCCCEEEEECCCCCCC------------------------------------------------------C---
Q ss_conf 8964155653167630224322------------------------------------------------------2---
Q gi|254780497|r 126 YIRSGVVRRVMVIGSDTFSRIV------------------------------------------------------D--- 148 (324)
Q Consensus 126 li~~g~~~~~Lvv~~e~~S~~~------------------------------------------------------d--- 148 (324)
.|++|.++.+|+++.|..+..- |
T Consensus 100 aI~sG~~d~vlv~g~ek~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~a~rym~~yG~t~E~lA~Vav~~r~~A~~NP~A 179 (391)
T PRK08313 100 LVQSGKYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRRSGAPTHIGAMVAVKDRLNGAKNPYA 179 (391)
T ss_pred HHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99748877899987403577654210147874203244766999999999999986989999999999999876119730
Q ss_pred -CCCCC--------C-----------CCCCCCCCCEEEEECCCCCCCCCC---CCC-CEEEEEECCCCCCCCEEECCCCC
Q ss_conf -45663--------2-----------323454431234402654465434---454-10123203555556177548765
Q gi|254780497|r 149 -WSDRS--------T-----------CVLFGDGAGALILEGVEVKGSSMA---DTG-ILSTYLCSDGSYIDKLYVDGGPS 204 (324)
Q Consensus 149 -~~d~~--------~-----------~~lfGDGAaA~ll~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~ 204 (324)
+..+. + +....|||+|+||.+.+....... ... +...-..++. ..
T Consensus 180 ~~r~~~lt~edvl~s~~Ia~PL~l~dc~~~sDGAaAvVl~s~e~a~~~~~~~~~~~~i~g~~~~~~~-----~~------ 248 (391)
T PRK08313 180 HLHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADARVAEGHPVAWIHGTALRTEP-----LA------ 248 (391)
T ss_pred CCCCCCCCHHHCCCCCEEECCCCHHHCCCCCCCCEEEEEECHHHHHHCCCCCCCEEEEEEEEEECCC-----CC------
T ss_conf 0058999888803686475687503018989864799995399997524578972999999986588-----76------
Q ss_pred CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCCCCCCCCCCHHHHHHHHHHCCCCHH----HHHH----
Q ss_conf 44433200103202444557777777888898740010--0012102444441589999997197876----7336----
Q gi|254780497|r 205 TSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTI--ENIDWFVPHQANWRIINSIVDKMKIPFD----KVIV---- 274 (324)
Q Consensus 205 ~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~--~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~~~---- 274 (324)
......+. ........+++++++|+++ +|||.+-+|-.--...-...|.||+-+. +++.
T Consensus 249 -~~~~d~~~----------~~~~~~aa~~a~~~Agi~~P~~DiDvaevyD~Ft~~~l~~lE~lGfc~~Ge~~~~v~~G~~ 317 (391)
T PRK08313 249 -FAGRDQVN----------PQAGRDAAAALWKAAGITDPIDEIDVAEIYVPFSWFEPMWLENLGFAPEGEGWKLTEAGET 317 (391)
T ss_pred -CCCCCCCC----------CHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHCCCC
T ss_conf -45566455----------0899999999999759999510164788615643899999998399888826999977894
Q ss_pred -------------HHHHHCCCHHHHHHHHHHHHHHC--C-----CCCCCCEEEEEEECCCCCEEEEEE
Q ss_conf -------------58651933012699999999980--6-----889998999999714501456878
Q gi|254780497|r 275 -------------TVDIHGNTSAASIPLALAVAVKE--G-----RVKKGDCLLLEAMGGGFTSGTVLL 322 (324)
Q Consensus 275 -------------~~~~~Gn~~sas~~~~L~~~~~~--g-----~l~~Gd~vll~~~G~G~s~~a~ll 322 (324)
.+. -+.++ ++=...+.++.++ | +++.-...|.-+.|.|.+..++.+
T Consensus 318 ~~~G~lPvNtsGGlls-g~p~g-a~G~~~v~Ea~~QLrG~Ag~rQV~~a~~al~~~~GG~~~~~~v~i 383 (391)
T PRK08313 318 AIGGRLPVNPSGGVLS-SNPIG-ASGMIRFAEAALQVMGKAGEHQVPGARKALGHAYGGGSQFFSMWV 383 (391)
T ss_pred CCCCCCCEECCCCHHC-CCCCC-HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEEEE
T ss_conf 6799844508972330-89872-679999999999965776566489751899955677121699999
No 72
>PRK09051 beta-ketothiolase; Provisional
Probab=99.54 E-value=2e-13 Score=105.49 Aligned_cols=100 Identities=20% Similarity=0.249 Sum_probs=84.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC-CCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHH
Q ss_conf 898899999999999999740212354433665012233458-985310011220268-644442101220034678889
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTF-PSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTAD 124 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~-p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~ 124 (324)
-.+.++.||+..+++.+|++++++|++||-||++++.+...- +..+....-..|++. ..++.|+..|.|++.++..|.
T Consensus 22 l~~~~~~~L~a~~i~~~l~r~~i~p~~Id~Vi~G~v~~~g~~~~niaR~aal~aGlp~~vp~~tVnr~C~SGl~Ai~~Aa 101 (394)
T PRK09051 22 LKDFAPTDLGAIVVREALARAGVDGDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPALNVNRLCGSGLQAIVSAA 101 (394)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHH
T ss_conf 78998899999999999987198989989799992355676676789999997699988871887155477899999999
Q ss_pred HHHHHCCCCCCEEEEECCCCCC
Q ss_conf 9896415565316763022432
Q gi|254780497|r 125 SYIRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 125 ~li~~g~~~~~Lvv~~e~~S~~ 146 (324)
..|++|..+.+|+.+.|.+|+.
T Consensus 102 ~~I~~G~~d~viAGGvEsmS~~ 123 (394)
T PRK09051 102 QAILLGDADVAIGGGAESMSRA 123 (394)
T ss_pred HHHHCCCCCEEEEECCHHCCCC
T ss_conf 9997699887787241020358
No 73
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.54 E-value=1.8e-12 Score=99.33 Aligned_cols=288 Identities=20% Similarity=0.262 Sum_probs=162.0
Q ss_pred CCEEEEEEEEEECCCCEECHHHH-HHHHCCCHHHHHHCCCCCE-----------EE---EE--------CCC-----CCH
Q ss_conf 92269999999649841178899-9880999878110247518-----------89---82--------898-----899
Q gi|254780497|r 1 MIRSTVRGIGLSLPRRVLSNSDL-ESIVDTSDGWIKRRVGISR-----------RH---IA--------GKD-----ETT 52 (324)
Q Consensus 1 M~~~~I~~~g~ylP~~~v~~~el-~~~~~~~~~~i~~~~GI~~-----------R~---~~--------~~~-----e~~ 52 (324)
|++|.|+|+|...|--. +.+++ +.... -++||.. +. +. ++. ...
T Consensus 1 MrRVvITGiG~vsp~G~-~~e~~w~~L~~-------G~sgi~~~~~~d~~~~~~~~ag~v~~fd~~~~~~~~~~~~~dr~ 72 (405)
T PRK08439 1 MKRVVVTGMGMINSLGL-DKESSFKAICN-------GECGIKKITLFDASDFPVKIAGEITDFDPTEVMDPKEVKKADRF 72 (405)
T ss_pred CCCEEEECCEEECCCCC-CHHHHHHHHHC-------CCCCEEECCCCCCCCCCCEEEEEECCCCHHHCCCHHHHHHHCHH
T ss_conf 97199973134798718-99999999983-------99977748876766897418998388795673899999862899
Q ss_pred HHHHHHHHHHHHHHHCCCC----CCCCEEEEECCCCC-----------------CCCC----C-----CCCCHHHHHHCC
Q ss_conf 9999999999997402123----54433665012233-----------------4589----8-----531001122026
Q gi|254780497|r 53 ASLGEAAARDALHHAEMSV----DDIDLIIVATSTPD-----------------QTFP----S-----TAVNIQNRLGMK 102 (324)
Q Consensus 53 ~~la~~Aa~~al~~a~~~~----~~Id~ii~~s~~~~-----------------~~~p----~-----~a~~i~~~LGl~ 102 (324)
..++..|+++||+++|+.. +.+.. ++++.... ...| . .+.+|...+|++
T Consensus 73 ~~lal~aa~eAl~dAGl~~~~~~~r~Gv-~~gt~~g~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~a~~is~~~~~~ 151 (405)
T PRK08439 73 IQLGLKAAREAMKDAGFLEEHDKDRFGV-SSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLK 151 (405)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCEEE-EEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999999999998448775577566799-998667755779999999984697644802767888889999999983998
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC-CC----------C-----------CCCCCC-CCCCCCC
Q ss_conf 86444421012200346788899896415565316763022-43----------2-----------224566-3232345
Q gi|254780497|r 103 RGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF-SR----------I-----------VDWSDR-STCVLFG 159 (324)
Q Consensus 103 ~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~-S~----------~-----------~d~~d~-~~~~lfG 159 (324)
.+++.++.+|++++.||..|..+|+.|..+.++|+++|.. ++ . ..+.|+ ...+..|
T Consensus 152 -Gp~~tv~tACass~~Ai~~A~~~I~~G~~d~~ivgG~~~~l~~~~~~~f~~~~~ls~~~~~P~~~~rPFD~~r~G~v~g 230 (405)
T PRK08439 152 -GPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFASMKALSTRNDDPKKASRPFDKDRDGFVMG 230 (405)
T ss_pred -CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf -9765626375899999999999997089776774150220273568999875323025889654667876899847742
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 44312344026544654344541012320355555617754876544433200103202444557777777888898740
Q gi|254780497|r 160 DGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTH 239 (324)
Q Consensus 160 DGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~g 239 (324)
+||+++||++.+...... ..+...... .+...+ + .+....+ .....+.++++|+++|
T Consensus 231 EGa~~lvLe~~~~A~~rg--a~i~a~i~G-~~~~~d-----~-------~~~t~P~--------~~g~~~a~~~Al~~ag 287 (405)
T PRK08439 231 EGAGALVLEEYESAKKRG--AKIYAELIG-FGESGD-----A-------NHITSPA--------PDGPLRAMKKALEMAG 287 (405)
T ss_pred CCEEEEEECCHHHHHHCC--CEEEEEEEE-ECCCCC-----C-------CCCCCCC--------HHHHHHHHHHHHHHCC
T ss_conf 467889724488786579--968999998-767668-----8-------8998989--------8999999999999759
Q ss_pred CCCCCCCCCCCCCCCHH-----HHHHHHHHCCCCHHH--HHHHHHHHCCCHHHHHHHHHH---HHHHCCCCCC-------
Q ss_conf 01000121024444415-----899999971978767--336586519330126999999---9998068899-------
Q gi|254780497|r 240 LTIENIDWFVPHQANWR-----IINSIVDKMKIPFDK--VIVTVDIHGNTSAASIPLALA---VAVKEGRVKK------- 302 (324)
Q Consensus 240 l~~~did~~~~Hq~~~~-----~~~~~~~~lgl~~e~--~~~~~~~~Gn~~sas~~~~L~---~~~~~g~l~~------- 302 (324)
++ +||++-.|-.+-. -.+.+.+.++-.... +-.+=..+||+-.++=.+.+. .+++++.+.|
T Consensus 288 ~~--~idyi~aHgTgT~~gD~~E~~Ai~~vfg~~~~~~~v~S~Ks~iGH~~gAaG~~e~i~~~lal~~g~ippt~n~~~~ 365 (405)
T PRK08439 288 NP--KVDYVNAHGTSTPYNDKNETAALKELFGSKENVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETP 365 (405)
T ss_pred CC--CEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 99--6117972057687878999999999856667788865731000323666789999999999964955898999999
Q ss_pred -----------------CCEEEEEEECCCCCEEEEEEE
Q ss_conf -----------------989999997145014568786
Q gi|254780497|r 303 -----------------GDCLLLEAMGGGFTSGTVLLR 323 (324)
Q Consensus 303 -----------------Gd~vll~~~G~G~s~~a~llr 323 (324)
-+.++--+||=|=+-.+++||
T Consensus 366 dp~~~l~~v~~~~~~~~~~~al~nSFGFGG~Na~lvl~ 403 (405)
T PRK08439 366 DPECDLDYIPNIARKADLKAVMSNSFGFGGTNGVVIFK 403 (405)
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEE
T ss_conf 98898212789765688789999660477267899998
No 74
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.53 E-value=1.9e-12 Score=99.20 Aligned_cols=254 Identities=19% Similarity=0.163 Sum_probs=153.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC--CCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 988999999999999997402123544336650122334589--853100112202686444421012200346788899
Q gi|254780497|r 48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFP--STAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADS 125 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p--~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~ 125 (324)
++++..+|+.+|+++||+++|++++|||.+++++. ++.... -.+.++.+.+|+.+.+...+..+|+++..++..|..
T Consensus 26 ~~~s~~eL~~eA~~~Al~DAGl~~~dID~~~~g~~-~~~~~g~~~~~~~~~~~~g~~~~p~~~v~~~~asg~~a~~~A~~ 104 (393)
T PRK06065 26 MLETPQELAWEAARQALDEAGLELKDIDCVVIGSA-PDAFDGVHMKGEYLAHGSGGIRKPVSRVFVGGATGVMVPIAGWY 104 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECC-CCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH
T ss_conf 99999999999999999984999899899999556-76545432036899975477788447874452788999999999
Q ss_pred HHHHCCCCCCEEEEECCCCCCC-----------CC--CCC----------------------------------------
Q ss_conf 8964155653167630224322-----------24--566----------------------------------------
Q gi|254780497|r 126 YIRSGVVRRVMVIGSDTFSRIV-----------DW--SDR---------------------------------------- 152 (324)
Q Consensus 126 li~~g~~~~~Lvv~~e~~S~~~-----------d~--~d~---------------------------------------- 152 (324)
.|++|.++.+||++.|..+... |+ +.+
T Consensus 105 ~I~sG~~d~vlvvg~ek~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~Al~a~rym~~yG~t~E~lA~Vav~~r~~A~~ 184 (393)
T PRK06065 105 HVASGLCKKVLAVAEEKMSPARPHPQSVFRYIWDPILEKPLNPNLIWIFAMEMHRYMHVCGVKKEDIALVSVKNKRNALN 184 (393)
T ss_pred HHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 98678776899987404688876631466630350113667886799999999999998499999999999999998744
Q ss_pred --C--------------C-----------CCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCC
Q ss_conf --3--------------2-----------323454431234402654465434454101232035555561775487654
Q gi|254780497|r 153 --S--------------T-----------CVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPST 205 (324)
Q Consensus 153 --~--------------~-----------~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (324)
. + +...+|||+|+||.+.+.... ..+..+ ++..-+...+...+ .
T Consensus 185 NP~A~~r~~~t~edvl~S~~Ia~PL~l~Dc~~~sDGAaAvVl~s~e~A~~-l~~~pv---~I~g~g~~~~~~~~-----~ 255 (393)
T PRK06065 185 NPYAQLAANITVEDVLNSEVLVWPVQLLDVSPVSDGAAAMVLASEDVARR-YTDTPV---WVEGVGWTLDNTEW-----T 255 (393)
T ss_pred CCHHHCCCCCCHHHHCCCCCCHHCCCHHHCCCCCCCEEEEEEECHHHHHH-CCCCCE---EEEEEEEECCCCCC-----C
T ss_conf 92966479999688604741221324253188788218999944899975-689978---99999974367664-----5
Q ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCCCCCCCCCCHHHHHHHHHHCCCCHH----HHHH-----
Q ss_conf 4433200103202444557777777888898740010--0012102444441589999997197876----7336-----
Q gi|254780497|r 206 SRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTI--ENIDWFVPHQANWRIINSIVDKMKIPFD----KVIV----- 274 (324)
Q Consensus 206 ~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~--~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~~~----- 274 (324)
. +.+ ..........+++.+++|+++ +|||.+-+|-.--..--...|.||+-+. +++.
T Consensus 256 ~----------~d~--~~~~~~~~aa~~Ay~~AGi~~p~~DiDv~evyD~Ft~~el~~lE~lGfc~~Ge~~~~v~~G~~~ 323 (393)
T PRK06065 256 N----------RDL--AYPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDYKELHHIEGLMLAKRGEAPKLLKEGVFD 323 (393)
T ss_pred C----------CCC--CCCHHHHHHHHHHHHHCCCCCCHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCC
T ss_conf 4----------553--3217999999999997699997200737985067508899999984999898379999779956
Q ss_pred -------H----HHHHCCCHHHHHHHHHHHHHHC--C-----CCCCCCEE-EEEEECC-CCCEEEEEEE
Q ss_conf -------5----8651933012699999999980--6-----88999899-9999714-5014568786
Q gi|254780497|r 275 -------T----VDIHGNTSAASIPLALAVAVKE--G-----RVKKGDCL-LLEAMGG-GFTSGTVLLR 323 (324)
Q Consensus 275 -------~----~~~~Gn~~sas~~~~L~~~~~~--g-----~l~~Gd~v-ll~~~G~-G~s~~a~llr 323 (324)
| +--.||-..++=...+.++.++ | ++++.-++ |.-+.|. |-....++||
T Consensus 324 ~~G~lPvNtsGGlls~Ghp~gatG~~~~~Ea~~QLrG~Ag~rQV~~~~~~gl~~~~Gg~~~~~~v~il~ 392 (393)
T PRK06065 324 RDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYWQLKGTAGKMQVKKPVHTGVAQAWGDLMQAGTVIVMR 392 (393)
T ss_pred CCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHCEEEEEEC
T ss_conf 799713538971002888561569999999999965776777479987789981667500345999955
No 75
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.53 E-value=9.8e-13 Score=101.05 Aligned_cols=100 Identities=17% Similarity=0.187 Sum_probs=84.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC-CCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHH
Q ss_conf 8988999999999999997402123544336650122334-58985310011220268-644442101220034678889
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQ-TFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTAD 124 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~-~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~ 124 (324)
-.+.++.||+..+++.+|++++++|++||-||++++.+-. .-...+..+.-.-|++. ..++.|+..|.|++.++..|.
T Consensus 23 l~~~~~~~L~a~~i~~~l~r~~i~~~~Id~vi~G~v~~~g~~g~n~aR~~al~aGlp~~vpa~TVnr~C~SGl~Ai~~Aa 102 (402)
T PRK08242 23 LHEVKPVRLAAGLLNALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQINRFCASGLEAVNLAA 102 (402)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHH
T ss_conf 79898999999999999987098989999799980776554457799999997699988864788450557899999999
Q ss_pred HHHHHCCCCCCEEEEECCCCCC
Q ss_conf 9896415565316763022432
Q gi|254780497|r 125 SYIRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 125 ~li~~g~~~~~Lvv~~e~~S~~ 146 (324)
..|++|..+.++..+.|.+|+.
T Consensus 103 ~~I~~G~~dv~iAGGvEsmS~~ 124 (402)
T PRK08242 103 AKVRSGWDDLVIAGGVESMSRV 124 (402)
T ss_pred HHHHCCCCCEEEECCCCCCCCC
T ss_conf 9996699888997661345657
No 76
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=99.53 E-value=1.6e-12 Score=99.62 Aligned_cols=251 Identities=19% Similarity=0.202 Sum_probs=151.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 89889999999999999974021235443366501223345898531001122026864444210122003467888998
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSY 126 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~l 126 (324)
.++.+..+|+.+|+++||+++|++++|||.+++++..+.. ....+.+.||++......+..+|+++..++..|...
T Consensus 20 ~~~~t~~~La~eA~~~AL~DAGl~~~DIDg~~~~~~~~~~----~~~~~~~~lGi~~~~~~~~~~gGas~~~~~~~A~~a 95 (388)
T PRK08142 20 APDKSVAQLHAEVAKGALADAGLTLADVDGYFCAGDAPGL----GPASMVDYLGLKVRHVDSTETGGSSYLAHVGHAAQA 95 (388)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCCC----CHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 8998999999999999999759998999999876788874----189999970998576447546357999999999999
Q ss_pred HHHCCCCCCEEEEECCCCC--------------C--CCCC----------------------------------------
Q ss_conf 9641556531676302243--------------2--2245----------------------------------------
Q gi|254780497|r 127 IRSGVVRRVMVIGSDTFSR--------------I--VDWS---------------------------------------- 150 (324)
Q Consensus 127 i~~g~~~~~Lvv~~e~~S~--------------~--~d~~---------------------------------------- 150 (324)
|++|.++.+||+.++.... . ..|+
T Consensus 96 IasG~~d~vlv~~a~~~~~~~~~~~~~~~~~~~~~~~~~e~p~G~~~~~~~Al~a~rym~~yG~t~e~lA~vav~~r~~A 175 (388)
T PRK08142 96 IAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYGMCAMRHMHEYGTTSEQLAWIKVAASHHA 175 (388)
T ss_pred HHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 98488778999981233566777544334456676420112357746999999999999997969999999999999986
Q ss_pred ---------CCC------------------CCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCC
Q ss_conf ---------663------------------23234544312344026544654344541012320355555617754876
Q gi|254780497|r 151 ---------DRS------------------TCVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGP 203 (324)
Q Consensus 151 ---------d~~------------------~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (324)
.+. -+...+|||+|+||.+.+.... .....+ ++..-+.... ...
T Consensus 176 ~~NP~A~~r~~~t~edvl~s~~Ia~Pl~l~dc~~~sDGaaAvvl~s~e~a~~-l~~~~v---~i~g~g~~~~-----~~~ 246 (388)
T PRK08142 176 QHNPHAMLRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALIVARPEIARS-LKRPLV---KVLGAGEAIK-----GQM 246 (388)
T ss_pred CCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECHHHHHH-CCCCCE---EEEEEEEECC-----CCC
T ss_conf 0494101589989788347752352222474077668618999935999976-689958---9999997247-----876
Q ss_pred CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH----HHH------
Q ss_conf 5444332001032024445577777778888987400100012102444441589999997197876----733------
Q gi|254780497|r 204 STSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD----KVI------ 273 (324)
Q Consensus 204 ~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~~------ 273 (324)
.... . ...........++++++|++++|||.+-+|-.-...--...|.||+-+. +++
T Consensus 247 ~~~~--d-----------~~~~~~~~aa~~a~~~AGi~p~DiDv~e~yD~fs~~~~~~lE~lGfc~~Ge~~~~v~~G~~~ 313 (388)
T PRK08142 247 GGKV--D-----------LTYSGAAWSGPAAFAEAGVTPADIKYASIYDSFTITVLMQLEDLGFCKKGEGGKFVADGNLI 313 (388)
T ss_pred CCCC--C-----------CCHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCC
T ss_conf 6565--4-----------41258999999999985999888747863277508899999982997888369998779902
Q ss_pred -------HH----HHHHCCCHHHHHHHHHHHHHHCCCCCCC--------CEEEEEEECC----CCCEEEEEEE
Q ss_conf -------65----8651933012699999999980688999--------8999999714----5014568786
Q gi|254780497|r 274 -------VT----VDIHGNTSAASIPLALAVAVKEGRVKKG--------DCLLLEAMGG----GFTSGTVLLR 323 (324)
Q Consensus 274 -------~~----~~~~Gn~~sas~~~~L~~~~~~g~l~~G--------d~vll~~~G~----G~s~~a~llr 323 (324)
.| +--.||.+.++=+..+.++.++-+=+.| +..|.-++|. +....+++|+
T Consensus 314 ~~~G~lPvNtsGGlls~ghp~~atG~~~~~Eav~QLrG~Ag~~~QV~~a~~al~~~~GG~~~~~~~~~~~il~ 386 (388)
T PRK08142 314 SGVGKLPFNTDGGGLCNNHPANRGGMTKVIEAVRQLRGEAHPAVQVPNCDLALAHGTGGLLGSRHGSATLILE 386 (388)
T ss_pred CCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEE
T ss_conf 2899802508964321898662379999999999971778987667987589996888401247614899970
No 77
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.52 E-value=1.2e-12 Score=100.59 Aligned_cols=243 Identities=19% Similarity=0.216 Sum_probs=146.2
Q ss_pred HHHHHHHHHHHHHHHHCCC-CC-----CCCEEEEECCCCC-----------------CC--------CCC-CCCCHHHHH
Q ss_conf 9999999999999740212-35-----4433665012233-----------------45--------898-531001122
Q gi|254780497|r 52 TASLGEAAARDALHHAEMS-VD-----DIDLIIVATSTPD-----------------QT--------FPS-TAVNIQNRL 99 (324)
Q Consensus 52 ~~~la~~Aa~~al~~a~~~-~~-----~Id~ii~~s~~~~-----------------~~--------~p~-~a~~i~~~L 99 (324)
...|++.|+++||+++|+. .+ +++ |++++.... .. +|+ .+++|...+
T Consensus 4 ~~~~a~~AA~eAl~dAGl~~~~~~~~~r~G-V~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 82 (336)
T PRK09116 4 VSLMATRASELALADAGLLGDPILTDGRMG-VAYGSSTGSTDPIGAFGTMLLTGSMSGITATTYVRMMPHTTAVNVGLFF 82 (336)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCEE-EEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHH
T ss_conf 899999999999996599998667888889-9999574768999999999971898764835776532229999999996
Q ss_pred HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC---------------------CCCC-CCCCCC
Q ss_conf 026864444210122003467888998964155653167630224322---------------------2456-632323
Q gi|254780497|r 100 GMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIV---------------------DWSD-RSTCVL 157 (324)
Q Consensus 100 Gl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~---------------------d~~d-~~~~~l 157 (324)
|++ .+++.+..+|++++.||..|..+|++|+.+.+++.++|..++.. ++.| ....+.
T Consensus 83 ~l~-Gps~tv~tACsSs~~Al~~A~~~I~~G~~d~~i~Gg~~~l~~~~~~~f~~l~~~s~~~~~p~~~~rPFD~~r~G~v 161 (336)
T PRK09116 83 GLK-GRVIPTSSACTSGSQGIGYAYEAIKYGYQTLMLAGGAEELCPTEAAVFDTLFATSTKNDAPELTPRPFDANRDGLV 161 (336)
T ss_pred CCC-CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
T ss_conf 899-9751635541689999999999997599888993500026880789999999983489999877787778999547
Q ss_pred CCCCCCEEEEECCCCCCCCCC--CCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 454431234402654465434--454101232035555561775487654443320010320244455777777788889
Q gi|254780497|r 158 FGDGAGALILEGVEVKGSSMA--DTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVF 235 (324)
Q Consensus 158 fGDGAaA~ll~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L 235 (324)
.|+|+++++|++.+....... ...+.+....+|+.. ....+ .....+.++++|
T Consensus 162 ~gEGa~~lvLe~~~~A~~rga~i~a~i~G~~~~~dg~~-----------------~t~P~--------~~~~~~~~~~al 216 (336)
T PRK09116 162 IGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAH-----------------VTQPQ--------AETMQIAMELAL 216 (336)
T ss_pred ECCEEEEEEEEEHHHHHHCCCEEEEEEECEEECCCCCC-----------------CCCCC--------HHHHHHHHHHHH
T ss_conf 70434799972889998679957999812066048888-----------------98979--------999999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCHHH-----HHHHHHHCCCCHHHHHH-HHHHHCCCHHHHHHHHHHH---HHHCCCCC-----
Q ss_conf 8740010001210244444158-----99999971978767336-5865193301269999999---99806889-----
Q gi|254780497|r 236 DSTHLTIENIDWFVPHQANWRI-----INSIVDKMKIPFDKVIV-TVDIHGNTSAASIPLALAV---AVKEGRVK----- 301 (324)
Q Consensus 236 ~~~gl~~~did~~~~Hq~~~~~-----~~~~~~~lgl~~e~~~~-~~~~~Gn~~sas~~~~L~~---~~~~g~l~----- 301 (324)
++++++++|||++-.|-.+-.. .+.+.+.++- +..+. +=..+||+..++=.+.+.. +++++.+.
T Consensus 217 ~~ag~~~~~i~yI~aHgtgT~~gD~~E~~ai~~~fg~--~~pi~S~Ks~~GH~~gAaG~~e~i~~~~~l~~g~ipp~~n~ 294 (336)
T PRK09116 217 KDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFGA--RMPISSLKSYFGHTLGACGALEAWFSIEMMNEGWFAPTLNL 294 (336)
T ss_pred HHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCC--CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 9709880212289953777888899999999998576--78887764210441777999999999999965961898999
Q ss_pred --------------------CCCEEEEEEECCCCCEEEEEEE
Q ss_conf --------------------9989999997145014568786
Q gi|254780497|r 302 --------------------KGDCLLLEAMGGGFTSGTVLLR 323 (324)
Q Consensus 302 --------------------~Gd~vll~~~G~G~s~~a~llr 323 (324)
+-+.++.-+||=|=+=.+++||
T Consensus 295 ~~~~p~~~~l~~v~~~~~~~~~~~~l~nsfGfGG~Na~lvlr 336 (336)
T PRK09116 295 TNVDPACGALDYIMGEGREIDTEYVMSNNFAFGGINTSLIFK 336 (336)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEC
T ss_conf 999977665677788774378889999344287445899979
No 78
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=99.52 E-value=3.3e-13 Score=104.08 Aligned_cols=100 Identities=18% Similarity=0.172 Sum_probs=83.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC-CCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 89889999999999999974021235443366501223345-898531001122026-8644442101220034678889
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQT-FPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTAD 124 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~-~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~ 124 (324)
-.+.++.||++.+++.+|++++++|++||-||++.+.+... ....+..+.-.-|++ ...++.|+..|+|++.|+..|.
T Consensus 21 l~~~~~~~L~a~~i~~~l~r~~i~~~~Id~vi~G~v~~~g~~~~n~aR~~al~aGlp~~vp~~tVnr~CaSGl~Ai~~Aa 100 (401)
T PRK08131 21 LASVRPDDLAATVIRRLVEKSGFAGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVNRLCASGLSAVIDAA 100 (401)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHH
T ss_conf 89998899999999999997298989989899981466565446699999996699988871687525357899999999
Q ss_pred HHHHHCCCCCCEEEEECCCCCC
Q ss_conf 9896415565316763022432
Q gi|254780497|r 125 SYIRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 125 ~li~~g~~~~~Lvv~~e~~S~~ 146 (324)
..|++|..+-+|+++.|.+|+.
T Consensus 101 ~~I~~G~~dvvlagGvEsMS~~ 122 (401)
T PRK08131 101 RAITCGEGDLYLAGGVESMSRA 122 (401)
T ss_pred HHHHCCCCCEEEEEEEECCCCC
T ss_conf 9985799772588506503546
No 79
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.51 E-value=6e-13 Score=102.38 Aligned_cols=99 Identities=11% Similarity=0.117 Sum_probs=81.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC-CCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 98899999999999999740212354433665012233458-98531001122026-86444421012200346788899
Q gi|254780497|r 48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTF-PSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADS 125 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~-p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~ 125 (324)
.+.++.+|+..+++.+|++++++|++||-|+++++.+.-.. +..+..+.-.-|++ ..+++.|+..|+|++.|+..|..
T Consensus 28 ~~~~~~~L~a~~~~~~l~r~gi~~~~Id~vi~G~~~~~g~~~~~~aR~~~l~aGlp~~vpa~tVn~~CaSG~~Ai~~A~~ 107 (394)
T PRK06445 28 NDLRPEELAAVLINALIEKTGIKPEEIGDVITGCALQVGENWLYGGRHVVLLAKLPYTIPAMHVDRQCASSLTTVAIGAM 107 (394)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHH
T ss_conf 78999999999999999874989899697999647555656674889999976999888748885541689999999999
Q ss_pred HHHHCCCCCCEEEEECCCCCC
Q ss_conf 896415565316763022432
Q gi|254780497|r 126 YIRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 126 li~~g~~~~~Lvv~~e~~S~~ 146 (324)
.|++|..+.+|+++.|.+|+.
T Consensus 108 ~I~sG~~dvvlAgGvEsmS~~ 128 (394)
T PRK06445 108 EIATGMADIVIAGGVEHMTHT 128 (394)
T ss_pred HHHCCCCCEEEEECEECCCCC
T ss_conf 997399999999474236678
No 80
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.51 E-value=1.6e-13 Score=106.04 Aligned_cols=222 Identities=18% Similarity=0.208 Sum_probs=138.5
Q ss_pred HHHHHHHHHHHHHCCCCCCCC----EEEEECCCCCCCC------------------CC-CCCCHHHHHHCCCCCCCCCCC
Q ss_conf 999999999974021235443----3665012233458------------------98-531001122026864444210
Q gi|254780497|r 55 LGEAAARDALHHAEMSVDDID----LIIVATSTPDQTF------------------PS-TAVNIQNRLGMKRGFAFDMQA 111 (324)
Q Consensus 55 la~~Aa~~al~~a~~~~~~Id----~ii~~s~~~~~~~------------------p~-~a~~i~~~LGl~~~~~~di~~ 111 (324)
|+.+++.+||+++|+++++++ -|+.+++..+|.. ++ .|++|...+|++ .+++.|..
T Consensus 90 l~L~~a~~Al~dAG~~~~~l~~~r~GV~vG~~~~d~~~~~~~~~~~~~~~~~~~~~~s~~a~ris~~~~l~-Gp~~~vdt 168 (424)
T smart00825 90 LLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR-GPSVTVDT 168 (424)
T ss_pred HHHHHHHHHHHHCCCCHHHCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC-CCEEEECC
T ss_conf 99999999999739983565887438999751663777764175557852024531768999999985899-96351414
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC-CC----------CC------CCCC-CCCCCCCCCCCCEEEEECCCCC
Q ss_conf 12200346788899896415565316763022-43----------22------2456-6323234544312344026544
Q gi|254780497|r 112 VCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF-SR----------IV------DWSD-RSTCVLFGDGAGALILEGVEVK 173 (324)
Q Consensus 112 ~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~-S~----------~~------d~~d-~~~~~lfGDGAaA~ll~~~~~~ 173 (324)
+|+|++.||..|..+|++|+.+.+|+-+++.. +. .+ .+.| ....+.+|+|++++||++.+..
T Consensus 169 ACsSsl~Al~~A~~~i~~G~~D~alvGg~~~~~~p~~~~~~~~~~~lS~~g~~rpFD~~adG~v~gEGa~~lvLk~l~~A 248 (424)
T smart00825 169 ACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGVVVLKRLSDA 248 (424)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCEEECCCCEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHH
T ss_conf 72899999999999997699633001426673487899998615787999987557788998410476579974659999
Q ss_pred CCCC--CCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 6543--44541012320355555617754876544433200103202444557777777888898740010001210244
Q gi|254780497|r 174 GSSM--ADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPH 251 (324)
Q Consensus 174 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~H 251 (324)
.... ....+.+....+|+.... ....++ ....++++++|++++++|+||+++-.|
T Consensus 249 ~~~g~~Iya~I~G~~~~~dG~~~~---------------~~~P~~--------~~~~~~~~~Al~~a~i~p~~I~yieaH 305 (424)
T smart00825 249 LRDGDPILAVIRGSAVNQDGRSNG---------------LTAPSG--------PAQARLIRQALARAGVDPADVDYVEAH 305 (424)
T ss_pred HHCCCCEEEEEECEEEECCCCCCC---------------CCCCCH--------HHHHHHHHHHHHHHCCCCCCCCEEEEC
T ss_conf 876991799993437825898787---------------789998--------999999999999829896646879960
Q ss_pred CCCHHH-----HHHHHHHCCCCH--HH-H-HH-HHHHHCCCHHHHHHHHHHH---HHHCCCC
Q ss_conf 444158-----999999719787--67-3-36-5865193301269999999---9980688
Q gi|254780497|r 252 QANWRI-----INSIVDKMKIPF--DK-V-IV-TVDIHGNTSAASIPLALAV---AVKEGRV 300 (324)
Q Consensus 252 q~~~~~-----~~~~~~~lgl~~--e~-~-~~-~~~~~Gn~~sas~~~~L~~---~~~~g~l 300 (324)
-.+... .+.+.+.++-.. .+ + +. +=..+||+.+++=.+.+-. +++++.+
T Consensus 306 gtgt~~gD~~E~~al~~~f~~~~~~~~~~~igS~K~~~GH~~~AaG~~~lik~~lal~~~~i 367 (424)
T smart00825 306 GTGTPLGDPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTI 367 (424)
T ss_pred CCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 36687779999999999962368877842520453442333777899999999999856970
No 81
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=99.51 E-value=1.6e-13 Score=106.06 Aligned_cols=273 Identities=14% Similarity=0.155 Sum_probs=152.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC-CCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 8988999999999999997402123544336650122334-5898531001122026-8644442101220034678889
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQ-TFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTAD 124 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~-~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~ 124 (324)
-.+.++.||+..+++.+|+|++++|++||.||++++.+.. ..+..+..+.-..|++ ...++.|+..|+|++.|+..|.
T Consensus 21 l~~~~~~~L~~~a~~~~l~r~~v~~~~Id~vi~G~v~~~g~~~~n~aR~~~l~aglp~~vpa~tvn~~C~SGl~Ai~~A~ 100 (390)
T PRK06504 21 LAGWHPADLAAQVLDALVDRSGADPAQIEDVIMGCVSQAGEQAMNVARNAVLASKLPESVPGTSIDRQCGSSQQALHFAA 100 (390)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHH
T ss_conf 89998999999999999988098989989899991787453324099999997799976754777346785899999999
Q ss_pred HHHHHCCCCCCEEEEECCCCCCCCC--C------------CCC-----CCCCCCCCCCEEEE------ECCCCCC-----
Q ss_conf 9896415565316763022432224--5------------663-----23234544312344------0265446-----
Q gi|254780497|r 125 SYIRSGVVRRVMVIGSDTFSRIVDW--S------------DRS-----TCVLFGDGAGALIL------EGVEVKG----- 174 (324)
Q Consensus 125 ~li~~g~~~~~Lvv~~e~~S~~~d~--~------------d~~-----~~~lfGDGAaA~ll------~~~~~~~----- 174 (324)
..|++|..+.+|+.+.|.+|+.-.. . ++. ....|+.+.+|-.+ ++++...
T Consensus 101 ~~I~sG~~dv~lagGvEsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~AE~~A~~ygisRe~qD~~A~~S 180 (390)
T PRK06504 101 QAVMSGTMDVVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQFTGAEMMAKKYGLSKDQLDEYALQS 180 (390)
T ss_pred HHHHCCCCCEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 99847996777315621036898876543331126776688235663788754336799999999795999999999999
Q ss_pred ---------CCCCCCCCEEEEEECCCCCCCCEEECCCCCCC---CCCC---CHH-------------HCCHH--------
Q ss_conf ---------54344541012320355555617754876544---4332---001-------------03202--------
Q gi|254780497|r 175 ---------SSMADTGILSTYLCSDGSYIDKLYVDGGPSTS---RTVG---CIR-------------MEGKA-------- 218 (324)
Q Consensus 175 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~-------------~~g~~-------- 218 (324)
......+++................+.+.... +... .+. .||-.
T Consensus 181 h~~A~~A~~~g~f~~EIvPv~~~~~~~~~~~~~~De~~R~~~t~e~l~~l~p~~~~gtvTagnss~~~DGAAavll~Se~ 260 (390)
T PRK06504 181 HQRAIAATQAGKFKDEIVPLEITRADGSTDMHTIDEGIRFDATLEGIKGVKLIAEGGKLTAATASQICDGASGVMVVNER 260 (390)
T ss_pred HHHHHHHHHCCCCCCEEEEEEEECCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999998748952016877874378870140465455788588777415446889977688667777616888874499
Q ss_pred -H--------------------HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--
Q ss_conf -4--------------------44557777777888898740010001210244444158999999719787673365--
Q gi|254780497|r 219 -V--------------------FKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT-- 275 (324)
Q Consensus 219 -~--------------------~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~-- 275 (324)
. .......-...++++|+++|++++|||.|=+|-+--...-.+.+.|+++++|+..+
T Consensus 261 ~a~~~gl~pla~i~~~~~~g~dP~~m~~~p~~A~~k~L~~agl~~~Did~~EinEAFA~~~l~~~~~l~~d~~kvN~~GG 340 (390)
T PRK06504 261 GLKALGVKPLARIHHMTVTGGDPVIMLEAPLPATERALKKAGMKIDDIDLYEVNEAFASVPLAWLKATGADPERLNVNGG 340 (390)
T ss_pred HHHHCCCCCEEEEECCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCHHHCCCCCC
T ss_conf 99987998269995303752687887243999999999985998113885451035588899999984898676788863
Q ss_pred HHHHCCCHH---HHHHHHHHHHHHCCCCCCCCEEEE-EEECCCCCEEEEEEE
Q ss_conf 865193301---269999999998068899989999-997145014568786
Q gi|254780497|r 276 VDIHGNTSA---ASIPLALAVAVKEGRVKKGDCLLL-EAMGGGFTSGTVLLR 323 (324)
Q Consensus 276 ~~~~Gn~~s---as~~~~L~~~~~~g~l~~Gd~vll-~~~G~G~s~~a~llr 323 (324)
.--+||=.. +-+.+.|.+.++. +.|.+.+. ...|.|.-. +++++
T Consensus 341 aiA~GHP~GaTGar~~~~l~~~L~~---~~~~~gl~s~c~ggG~g~-a~viE 388 (390)
T PRK06504 341 AIALGHPLGASGTKLMTTLIHALKQ---RGKRYGLQTMCEGGGMAN-VTIVE 388 (390)
T ss_pred HHHHCCCCCCCHHHHHHHHHHHHHH---HCCCEEEEEECCCCCCEE-EEEEE
T ss_conf 9872989130799999999999998---299989999613013333-69898
No 82
>PRK07025 consensus
Probab=99.51 E-value=3.4e-13 Score=104.00 Aligned_cols=99 Identities=18% Similarity=0.221 Sum_probs=85.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 98899999999999999740212354433665012233458985310011220268-64444210122003467888998
Q gi|254780497|r 48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTADSY 126 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~~l 126 (324)
.+.++.||++.+++.+|++++++|++||-||+++..+...-+..+..+.-..|++. .+++.|+..|+|++.|+..|...
T Consensus 22 ~~~~~~~L~~~~i~~~l~r~~i~~~~Id~vi~G~v~~~g~g~n~aR~~al~aGlp~~vp~~tVnr~C~SGl~Ai~~Aa~~ 101 (393)
T PRK07025 22 AKIAAPELGATVIRAVLERAGVKPEQVSEVILGQVLTAGSGQNPARQALIKAGLPNAVPGMTINKVCGSGLKAVMLAANA 101 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHH
T ss_conf 88989999999999999982989899898999924765556649999999769998886488841536778999999999
Q ss_pred HHHCCCCCCEEEEECCCCCC
Q ss_conf 96415565316763022432
Q gi|254780497|r 127 IRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 127 i~~g~~~~~Lvv~~e~~S~~ 146 (324)
|++|..+.+|+.+.|.+|+.
T Consensus 102 I~~G~~dvvlagGvEsmS~~ 121 (393)
T PRK07025 102 IVAGDAEIVVAGGQENMSAA 121 (393)
T ss_pred HHCCCCCEEEEEEEEECCCC
T ss_conf 86799766788601103567
No 83
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.50 E-value=9.5e-13 Score=101.12 Aligned_cols=99 Identities=17% Similarity=0.263 Sum_probs=86.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 9889999999999999974021235443366501223345898531001122026-864444210122003467888998
Q gi|254780497|r 48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADSY 126 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~l 126 (324)
.+.++.+|+..+++.+|+|++++|++||-||++++.+...-|..+.++.-..|++ ...++.|+..|.|++.|+..|...
T Consensus 22 ~~~~~~~L~a~~ik~~l~r~~i~~~~Id~Vi~G~~~~~g~~~~~aR~aaL~aGlp~~vpa~tVnr~C~SGl~Ai~~Aa~~ 101 (404)
T PRK06205 22 KPVPAEELAATVLRALVERTGIDPARVDDVIFGQCYPNGEAPAIGRVAALDAGLPVTVPGMQLDRRCGSGLQAVITAAMQ 101 (404)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 99988999999999999981989899897999942656767779999999779898875588815053327899999999
Q ss_pred HHHCCCCCCEEEEECCCCCC
Q ss_conf 96415565316763022432
Q gi|254780497|r 127 IRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 127 i~~g~~~~~Lvv~~e~~S~~ 146 (324)
|++|..+.+|+.+.|.+|+.
T Consensus 102 I~sG~~dvviaGGvEsmS~~ 121 (404)
T PRK06205 102 VQTGAADVVIAGGAESMSNV 121 (404)
T ss_pred HHCCCCCEEEECCCCCCCCC
T ss_conf 96499777874142124668
No 84
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=99.50 E-value=7.9e-13 Score=101.65 Aligned_cols=272 Identities=17% Similarity=0.146 Sum_probs=149.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC-CCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 8988999999999999997402123544336650122334-5898531001122026-8644442101220034678889
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQ-TFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTAD 124 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~-~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~ 124 (324)
-.+.++.||+..+++.+|+|++++|++||-||++++.+.- .....+....=.-|++ ...++.|+..|.|++.++..|.
T Consensus 21 l~~~~~~~L~a~~ik~~l~r~~l~~~~id~Vi~G~v~~~g~~g~n~aR~aaL~aGlp~~vpa~tVnr~C~Sgl~Ai~~aa 100 (387)
T PRK07850 21 LSGLHAAELLGAVQRAVVERAGIDPGDVEQVIGGCVTQAGEQSNNITRVAWLTAGLPEHVGATTVDCQCGSAQQANHLVA 100 (387)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHH
T ss_conf 89998899999999999987298989979899987867655456899999997799976760656351117899999999
Q ss_pred HHHHHCCCCCCEEEEECCCCCCCCCC----CCC----CCCCCCCC---CCE------EEEECCCCCC-------------
Q ss_conf 98964155653167630224322245----663----23234544---312------3440265446-------------
Q gi|254780497|r 125 SYIRSGVVRRVMVIGSDTFSRIVDWS----DRS----TCVLFGDG---AGA------LILEGVEVKG------------- 174 (324)
Q Consensus 125 ~li~~g~~~~~Lvv~~e~~S~~~d~~----d~~----~~~lfGDG---AaA------~ll~~~~~~~------------- 174 (324)
..|++|..+.+++.+.|.+|+.--.. ++. ..+.+.+. -+| .=+++++...
T Consensus 101 ~~I~~G~~dv~iaGG~EsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~tAE~~A~~~gIsRe~qD~~A~~Sh~rA~~A~ 180 (387)
T PRK07850 101 GLIAAGAIDVGIACGIEAMSRVPLGANAGPDRGLPRPDSWDIDMPNQFEAAERIAKRRGITREDVDAFGLASQRRAAQAW 180 (387)
T ss_pred HHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99877998899982503036787767678887875355407677206689999999849898999999999999999998
Q ss_pred -CCCCCCCCEEEEEEC-CC--CCC-C--CEEECCCCCC--CCC----CCCHH------------HCCHH-----------
Q ss_conf -543445410123203-55--555-6--1775487654--443----32001------------03202-----------
Q gi|254780497|r 175 -SSMADTGILSTYLCS-DG--SYI-D--KLYVDGGPST--SRT----VGCIR------------MEGKA----------- 218 (324)
Q Consensus 175 -~~~~~~~~~~~~~~~-~~--~~~-~--~~~~~~~~~~--~~~----~~~~~------------~~g~~----------- 218 (324)
......+++...... +. ... + .+..+.+... .+. ...|. .||-.
T Consensus 181 ~~G~f~~EIvPv~~~~~d~~~~~~~~~~~~~~De~~r~tt~e~La~LkPvf~~GtvTAgNss~~~DGAAavll~s~~~a~ 260 (387)
T PRK07850 181 AEGRFDREISPVQAPVLDEQGQPTGERRLVTRDQGLRDTTMEGLAGLKPVLEGGIHTAGTSSQISDGAAAVLWMDEDRAR 260 (387)
T ss_pred HCCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 74983104766650012345775587168637888666766567522898999766567667555406898883699999
Q ss_pred ---------H---------HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH--HH
Q ss_conf ---------4---------445577777778888987400100012102444441589999997197876733658--65
Q gi|254780497|r 219 ---------V---------FKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTV--DI 278 (324)
Q Consensus 219 ---------~---------~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~--~~ 278 (324)
+ .......-...+.++|+++||+++|||.|=+|-+--...-.+.+.|++++||+..+- =-
T Consensus 261 ~~gl~p~a~i~~~a~~g~dP~~m~~gPv~A~~k~L~~agl~~~Did~~EinEAFAaq~l~~~~~l~~d~~kvN~~GGaiA 340 (387)
T PRK07850 261 ALGLRPRARIVAQALVGAEPYYHLDGPVQSTAKVLEKAGMKIGDIDLVEINEAFASVVLSWAQVHEPDMDRVNVNGGAIA 340 (387)
T ss_pred HCCCCEEEEEEEEEEEECCHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCHHHCCCCCCHHH
T ss_conf 87998259999667887485770706899999999985998346876786057788999999873997989799864887
Q ss_pred HCCCH---HHHHHHHHHHHHHCCCCCCCCEEEEE-EECCCCCEEEEEE
Q ss_conf 19330---12699999999980688999899999-9714501456878
Q gi|254780497|r 279 HGNTS---AASIPLALAVAVKEGRVKKGDCLLLE-AMGGGFTSGTVLL 322 (324)
Q Consensus 279 ~Gn~~---sas~~~~L~~~~~~g~l~~Gd~vll~-~~G~G~s~~a~ll 322 (324)
+||=. .+=+...|-+.++. +.|.+.+.. ..|.|.-. ++++
T Consensus 341 lGHP~GasGaRi~~~l~~~L~~---~~~~~Gl~t~C~ggG~g~-A~ii 384 (387)
T PRK07850 341 LGHPVGSTGARLITTALHELER---TDKSTALITMCAGGALST-GTII 384 (387)
T ss_pred HCCCCCCCHHHHHHHHHHHHHH---CCCCEEEEEECCHHCHHH-EEEE
T ss_conf 5888121379999999999987---299999999622014324-5989
No 85
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=99.50 E-value=1.4e-12 Score=100.13 Aligned_cols=267 Identities=22% Similarity=0.223 Sum_probs=149.9
Q ss_pred CEEEEEEEEEECCCCEECHHHH-HHHHCCCHHH--HHH--CCCCCEE-----------EEECC-----CCCHHHHHHHHH
Q ss_conf 2269999999649841178899-9880999878--110--2475188-----------98289-----889999999999
Q gi|254780497|r 2 IRSTVRGIGLSLPRRVLSNSDL-ESIVDTSDGW--IKR--RVGISRR-----------HIAGK-----DETTASLGEAAA 60 (324)
Q Consensus 2 ~~~~I~~~g~ylP~~~v~~~el-~~~~~~~~~~--i~~--~~GI~~R-----------~~~~~-----~e~~~~la~~Aa 60 (324)
.+|.|+|+|...|.-. +.+++ +....-.... +.+ ..+...+ ...++ -+...-|+..|+
T Consensus 1 rRVvItG~g~~~P~g~-~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~v~~f~~~~~~~~~~~~~~d~~~~~~l~aa 79 (399)
T cd00832 1 RRAVVTGIGVVAPNGL-GVEEYWKAVLDGRSGLGPITRFDPSGYPARLAGEVPDFDAAEHLPGRLLPQTDRMTRLALAAA 79 (399)
T ss_pred CCEEEECCEEECCCCC-CHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHCCHHHHHHHHHH
T ss_conf 9299971677897959-999999999729983542775575568776456779878011689889874699999999999
Q ss_pred HHHHHHHCCCCCCCCE----EEEECCCCCC-----------------CCCC---------CCCCHHHHHHCCCCCCCCCC
Q ss_conf 9999740212354433----6650122334-----------------5898---------53100112202686444421
Q gi|254780497|r 61 RDALHHAEMSVDDIDL----IIVATSTPDQ-----------------TFPS---------TAVNIQNRLGMKRGFAFDMQ 110 (324)
Q Consensus 61 ~~al~~a~~~~~~Id~----ii~~s~~~~~-----------------~~p~---------~a~~i~~~LGl~~~~~~di~ 110 (324)
++||+++|+++++++- |+.++....+ ..|. .+.+|...+|++ .+++-+.
T Consensus 80 ~~Al~dAGl~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~gl~-Gp~~tv~ 158 (399)
T cd00832 80 DWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGMR-GPSGVVV 158 (399)
T ss_pred HHHHHHCCCCHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-CCCCCHH
T ss_conf 998886099845648774289994256760255899999974185425611213566778888999982898-8741021
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCC---------------C------CCCCCCC-CCCCCCCCCCCEEEEE
Q ss_conf 0122003467888998964155653167630224---------------3------2224566-3232345443123440
Q gi|254780497|r 111 AVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFS---------------R------IVDWSDR-STCVLFGDGAGALILE 168 (324)
Q Consensus 111 ~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S---------------~------~~d~~d~-~~~~lfGDGAaA~ll~ 168 (324)
.+|+|++.|+..|..+|+.| .+.+++.++|... . ...+.|. ...+.+|+||+++||+
T Consensus 159 tacsssl~Ai~~A~~~i~~G-~d~~i~Gg~~~~l~p~~~~~~~~~g~ls~~~~p~~~~rPFD~~r~G~v~GEGa~~lvLe 237 (399)
T cd00832 159 AEQAGGLDALAQARRLVRRG-TPLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAAAGYVPGEGGAILVLE 237 (399)
T ss_pred CCCCHHHHHHHHHHHHHHCC-CCHHHCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEC
T ss_conf 14707999999999998769-72012177404516288999987566456999986504776789806642766788845
Q ss_pred CCCCCCCCCCC--CCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 26544654344--5410123203555556177548765444332001032024445577777778888987400100012
Q gi|254780497|r 169 GVEVKGSSMAD--TGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENID 246 (324)
Q Consensus 169 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did 246 (324)
+.+........ ..+.+.-...|+ .. .. .+ ...+.+.++++|++++++++|||
T Consensus 238 ~~~~A~~rGa~i~a~i~G~~~~~d~----------~~-~~-------~~--------~~~~~~a~~~Al~~agi~p~~I~ 291 (399)
T cd00832 238 DAAAARERGARVYGEIAGYAATFDP----------PP-GS-------GR--------PPGLARAIRLALADAGLTPEDVD 291 (399)
T ss_pred CHHHHHHCCCEEEEEEEEEEECCCC----------CC-CC-------CC--------HHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 4988987889599999888984899----------89-99-------89--------79999999999997199967056
Q ss_pred CCCCCCCCHH-----HHHHHHHHCCCCHHHH--HHHHHHHCCCHHHHHHHHHHH---HHHCCC
Q ss_conf 1024444415-----8999999719787673--365865193301269999999---998068
Q gi|254780497|r 247 WFVPHQANWR-----IINSIVDKMKIPFDKV--IVTVDIHGNTSAASIPLALAV---AVKEGR 299 (324)
Q Consensus 247 ~~~~Hq~~~~-----~~~~~~~~lgl~~e~~--~~~~~~~Gn~~sas~~~~L~~---~~~~g~ 299 (324)
++..|-.+-. =.+.+.+.++- ++. -.+=..+||+.+++=.+.+-. +++++.
T Consensus 292 yI~aHgTGT~~gD~~E~~Ai~~~fg~--~~~pv~S~K~~iGH~~~AaG~~~~i~~ll~l~~g~ 352 (399)
T cd00832 292 VVFADAAGVPELDRAEAAALAAVFGP--RGVPVTAPKTMTGRLYAGGAPLDVATALLALRDGV 352 (399)
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHCC--CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99983375855699999999999669--99878995422110699999999999999983596
No 86
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.49 E-value=3e-12 Score=97.98 Aligned_cols=100 Identities=19% Similarity=0.240 Sum_probs=86.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 898899999999999999740212354433665012233458985310011220268-6444421012200346788899
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTADS 125 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~~ 125 (324)
-.+.++.||+..+++.+|++++++|++||-||++++.+...-+..+.++.-..|++. ..++.|+..|.|++.++..|..
T Consensus 21 l~~~~~~~L~a~~i~~~l~r~~i~p~~Id~Vi~G~v~~~g~g~n~aR~~aL~aGlp~~vp~~tVnr~C~SGl~Ai~~Aa~ 100 (392)
T PRK05656 21 LANIPAVDLGAAVIRQLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQ 100 (392)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHH
T ss_conf 78998899999999999998399989989899990476566663999999977999888648985253677899999999
Q ss_pred HHHHCCCCCCEEEEECCCCCC
Q ss_conf 896415565316763022432
Q gi|254780497|r 126 YIRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 126 li~~g~~~~~Lvv~~e~~S~~ 146 (324)
.|++|..+-+|+.+.|.+|+.
T Consensus 101 ~I~~G~~dv~iagGvEsmS~~ 121 (392)
T PRK05656 101 AIRCGDAEVIIAGGQENMSLA 121 (392)
T ss_pred HHHCCCCCEEEEECCCCCCCC
T ss_conf 986699757898343336788
No 87
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.48 E-value=1.5e-12 Score=99.87 Aligned_cols=100 Identities=19% Similarity=0.230 Sum_probs=84.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC-CCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 8988999999999999997402123544336650122334-5898531001122026-8644442101220034678889
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQ-TFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTAD 124 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~-~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~ 124 (324)
-.+.++.+|+..+++.+|+|++++|++||-||++++.+.- .-+..+..++=.-|++ ...++.|+..|.|++.++.+|.
T Consensus 22 l~~~~~~eL~a~~i~~~l~r~gi~~~~Id~Vi~G~v~~~g~~g~n~aR~aaL~aGlp~~vpa~tVnr~C~SGl~Ai~~Aa 101 (392)
T PRK07108 22 FNMTHGATLGGHVVAAAVERAKLDPARVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVNRFCSSGLQTIALAA 101 (392)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHH
T ss_conf 88999999999999999987098989999899994665565557799999996699988862777574555389999998
Q ss_pred HHHHHCCCCCCEEEEECCCCCC
Q ss_conf 9896415565316763022432
Q gi|254780497|r 125 SYIRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 125 ~li~~g~~~~~Lvv~~e~~S~~ 146 (324)
..|++|..+.++..+.|.+|..
T Consensus 102 ~~I~~G~~dv~iAGGvEsmS~~ 123 (392)
T PRK07108 102 QRIIAGEGDVFVAGGVESISCV 123 (392)
T ss_pred HHHHCCCCCEEEEECEECCCCC
T ss_conf 7863899986788045114557
No 88
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.48 E-value=2.5e-12 Score=98.44 Aligned_cols=100 Identities=19% Similarity=0.240 Sum_probs=86.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 89889999999999999974021235443366501223345898531001122026-86444421012200346788899
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADS 125 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~ 125 (324)
-.+.++.+|++.+++.+|+|++++|++||-||++++.+....+..|..+.=.-|++ ...++.|+..|+|++.++..|..
T Consensus 32 l~~~~~~~L~a~~ik~~l~r~~i~p~~Id~Vi~G~v~~~~~g~n~AR~aaL~aGlp~~vp~~TVnr~C~SGl~Ai~~Aa~ 111 (436)
T PRK08963 32 FHGVPAVDLGKMVVGELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAE 111 (436)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHH
T ss_conf 58899899999999999998298989999899983675676772999999975999888626776322356899999999
Q ss_pred HHHHCCCCCCEEEEECCCCCC
Q ss_conf 896415565316763022432
Q gi|254780497|r 126 YIRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 126 li~~g~~~~~Lvv~~e~~S~~ 146 (324)
.|++|..+.+|..+.|.+|+.
T Consensus 112 ~I~~G~~dvvlaGGvEsMS~~ 132 (436)
T PRK08963 112 SIMAGTIDIGIAGGADSSSVL 132 (436)
T ss_pred HHHCCCCCEEEEECCCCCCCC
T ss_conf 997499978999451224668
No 89
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.48 E-value=4.3e-11 Score=90.53 Aligned_cols=248 Identities=16% Similarity=0.231 Sum_probs=155.6
Q ss_pred HHHHHHHHHHHHHHHH-CCCCCCCCEEEEECCC-CCC-CC---CCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 9999999999999740-2123544336650122-334-58---98531001122026-8644442101220034678889
Q gi|254780497|r 52 TASLGEAAARDALHHA-EMSVDDIDLIIVATST-PDQ-TF---PSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTAD 124 (324)
Q Consensus 52 ~~~la~~Aa~~al~~a-~~~~~~Id~ii~~s~~-~~~-~~---p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~ 124 (324)
...|+..|.++++++. ..++.++.+++..... +.. +. ......+.+.+|.. +..+.-+..||.|+..+|..|.
T Consensus 64 l~~la~~Al~eal~~~~~~~~~~~~l~l~l~e~~r~g~~~~~~~~~l~~l~~~~g~~~~~~s~~~~~G~as~~~al~~A~ 143 (346)
T PRK06147 64 LAAMAAPALAEALEGLPALDASEAPLLLCVAEEERPGRPAGLEERLLRSLEEELGLRFEPGSAVIARGRVSGAVALLQAR 143 (346)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHH
T ss_conf 99999999999985078656323646998366557778751057899999987275667660565256304999999999
Q ss_pred HHHHHCCCCCCEEEEECCCCC------------CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 989641556531676302243------------22245663232345443123440265446543445410123203555
Q gi|254780497|r 125 SYIRSGVVRRVMVIGSDTFSR------------IVDWSDRSTCVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGS 192 (324)
Q Consensus 125 ~li~~g~~~~~Lvv~~e~~S~------------~~d~~d~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (324)
.+|+.|....+||.++|.+-. .... +....++.|.||++++|++.+...... ..+...-+..+..
T Consensus 144 ~~l~~g~~~~~lv~GvDS~~~~~~l~~~~~~~rL~~~-~~~~GfvpGEgAa~llL~~~~~a~~rg--a~i~g~g~g~e~a 220 (346)
T PRK06147 144 RLIAAGGCPRVLVAGVDSLLTGPTLAHYEARERLLSS-QNSNGFIPGEAAAAVLLGRPAAARAPQ--LPCLGLGLGREPA 220 (346)
T ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCC-CCCCCCCCCCHHEEEEECCCCHHHCCC--CCEEEEEEECCCC
T ss_conf 9986599987999987234787899999860542689-998895852020478852611001479--8234566203665
Q ss_pred CCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH--H---HHHHHCCC
Q ss_conf 556177548765444332001032024445577777778888987400100012102444441589--9---99997197
Q gi|254780497|r 193 YIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRII--N---SIVDKMKI 267 (324)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~--~---~~~~~lgl 267 (324)
.+. ... ...+| +.+.+.++.+|+.+++.+++|++++.|..+.... + .+.+.++.
T Consensus 221 ~~~----------~~~---~p~~g--------~Gl~~A~~~Al~~ag~~~~~v~~~~ad~nGe~~r~~e~~~a~~R~~~~ 279 (346)
T PRK06147 221 TVE----------SED---LPLRG--------DGLTQAFRAALAEAGIGLEDVGYRLADLNGEQYRFKEAALAESRLFRV 279 (346)
T ss_pred CCC----------CCC---CCCCC--------HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCC
T ss_conf 334----------778---99865--------799999999998627985677779968998844213799999975202
Q ss_pred CHH--HHHHHHHHHCCCHHHHHHHHHHHH---HHCCCCCCCCEEEEEEECCCCCEEEEEEEC
Q ss_conf 876--733658651933012699999999---980688999899999971450145687869
Q gi|254780497|r 268 PFD--KVIVTVDIHGNTSAASIPLALAVA---VKEGRVKKGDCLLLEAMGGGFTSGTVLLRW 324 (324)
Q Consensus 268 ~~e--~~~~~~~~~Gn~~sas~~~~L~~~---~~~g~l~~Gd~vll~~~G~G~s~~a~llrw 324 (324)
..+ ..+..-+.+||+++|+-++.+.-+ +++| ..||..+|+++-.-+=..++++|++
T Consensus 280 ~~~~~~~~~pa~~~G~~GAA~G~~~~a~a~~a~~~g-~~pg~~~l~~~s~d~g~r~A~~l~~ 340 (346)
T PRK06147 280 PHEFPDLWHPAECLGECGAALGPALLGVALAASRKG-YGPGPPVLCHASDDDGARGAAVLEY 340 (346)
T ss_pred CCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHC-CCCCCCEEEEECCCCCCEEEEEEEE
T ss_conf 566666568777516478899999999999999828-6899867999547887526999850
No 90
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.47 E-value=8e-12 Score=95.23 Aligned_cols=99 Identities=18% Similarity=0.188 Sum_probs=82.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC-CCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 89889999999999999974021235443366501223345-898531001122026-8644442101220034678889
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQT-FPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTAD 124 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~-~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~ 124 (324)
-.+.++.||+..+++.+++|++++|++||-||++.+.+.-. .+..+.++.=.-|++ ...++.|+..|.|++.++..|.
T Consensus 24 l~~~~~~~Lga~~i~~~l~r~gi~p~~ID~Vi~G~v~~~g~~g~n~aR~aaL~AGlp~~vpa~TVnr~C~SGl~Ai~~aa 103 (417)
T PRK06025 24 LAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLDRFCGGGITSVNLAA 103 (417)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHH
T ss_conf 79998999999999999987098979989899980777654346599999996799988860787574640899999999
Q ss_pred HHHHHCCCCCCEEEEECCCCC
Q ss_conf 989641556531676302243
Q gi|254780497|r 125 SYIRSGVVRRVMVIGSDTFSR 145 (324)
Q Consensus 125 ~li~~g~~~~~Lvv~~e~~S~ 145 (324)
..|++|..+-++..+.|.+|+
T Consensus 104 ~~I~~G~~dvviAGGvEsmS~ 124 (417)
T PRK06025 104 AQIMSGMEDLVIAGGTEMMSY 124 (417)
T ss_pred HHHHCCCCCEEEEEEEECCCC
T ss_conf 999769998678953423676
No 91
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.47 E-value=7.5e-13 Score=101.78 Aligned_cols=223 Identities=19% Similarity=0.208 Sum_probs=138.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCC----EEEEECCCCCCC--------------CC-----CCCCCHHHHHHCCCCCCCCCC
Q ss_conf 9999999999974021235443----366501223345--------------89-----853100112202686444421
Q gi|254780497|r 54 SLGEAAARDALHHAEMSVDDID----LIIVATSTPDQT--------------FP-----STAVNIQNRLGMKRGFAFDMQ 110 (324)
Q Consensus 54 ~la~~Aa~~al~~a~~~~~~Id----~ii~~s~~~~~~--------------~p-----~~a~~i~~~LGl~~~~~~di~ 110 (324)
-|+.+++++||+++|+++++++ -|+.++...++. .+ ..+++|...+|++ .+++.+.
T Consensus 89 rl~L~~a~eAl~dAG~~~~~~~~~r~GV~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~~~-Gp~~~v~ 167 (421)
T cd00833 89 RLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR-GPSLTVD 167 (421)
T ss_pred HHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCCC
T ss_conf 999999999997528983464886349996666664788974275657853013543117999999996899-9600335
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC-CC----------C------CCCCC-CCCCCCCCCCCCEEEEECCCC
Q ss_conf 012200346788899896415565316763022-43----------2------22456-632323454431234402654
Q gi|254780497|r 111 AVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF-SR----------I------VDWSD-RSTCVLFGDGAGALILEGVEV 172 (324)
Q Consensus 111 ~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~-S~----------~------~d~~d-~~~~~lfGDGAaA~ll~~~~~ 172 (324)
.+|+|++.||..|..+|++|..+.+|+.+++.. +. . ..+.| ....+..|+||++++|++.+.
T Consensus 168 tACaSsl~Ai~~A~~~i~~G~~d~ai~Gg~~~~~~~~~~~~~~~~~~ls~~~~~rpFD~~~~G~v~gEGa~~lvLe~~~~ 247 (421)
T cd00833 168 TACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADADGYVRGEGVGVVVLKRLSD 247 (421)
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEECEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHH
T ss_conf 36279999999999998579943544120003158689999863578689998567888999865557513543687899
Q ss_pred CCCCCC--CCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 465434--454101232035555561775487654443320010320244455777777788889874001000121024
Q gi|254780497|r 173 KGSSMA--DTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVP 250 (324)
Q Consensus 173 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~ 250 (324)
...... ...+......+|+.... ....+ .+...+.++++|++++++++||+++-.
T Consensus 248 A~~~g~~I~a~i~G~g~~~dg~~~~---------------~~~P~--------~~~~~~~~~~al~~agi~~~~i~yiea 304 (421)
T cd00833 248 ALRDGDRIYAVIRGSAVNQDGRTKG---------------ITAPS--------GEAQAALIRRAYARAGVDPSDIDYVEA 304 (421)
T ss_pred HHHCCCCEEEEEEEEEECCCCCCCC---------------CCCCC--------HHHHHHHHHHHHHHHCCCCCEEEEEEE
T ss_conf 9876994799998999806897778---------------88875--------668999999999972999441208997
Q ss_pred CCCCHHH-----HHHHHHHCCCCH---HHH-H-HHHHHHCCCHHHHHHHHHHH---HHHCCCC
Q ss_conf 4444158-----999999719787---673-3-65865193301269999999---9980688
Q gi|254780497|r 251 HQANWRI-----INSIVDKMKIPF---DKV-I-VTVDIHGNTSAASIPLALAV---AVKEGRV 300 (324)
Q Consensus 251 Hq~~~~~-----~~~~~~~lgl~~---e~~-~-~~~~~~Gn~~sas~~~~L~~---~~~~g~l 300 (324)
|-.+-.. .+.+.+.++=.. ..+ + .+=..+||+-+++=.+.+-. +++++.+
T Consensus 305 HgtgT~~gD~~E~~ai~~~f~~~~~~~~~~~v~S~Ks~~GH~~~AaG~~~~i~~~lal~~~~i 367 (421)
T cd00833 305 HGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVI 367 (421)
T ss_pred ECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 447686669999999999961257777863023543453433576799999999999855982
No 92
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=99.47 E-value=5.5e-12 Score=96.24 Aligned_cols=99 Identities=15% Similarity=0.188 Sum_probs=86.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 898899999999999999740212354433665012233458985310011220268-6444421012200346788899
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTADS 125 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~~ 125 (324)
-.+.++.+|+..+++.+|++++++|++||-||++++.+....+..+.++.-..|++. +.++.|+..|.|++.|+..|..
T Consensus 22 l~~~~~~~L~a~vi~~~l~r~~i~p~~Id~Vi~G~v~~~~~g~n~AR~aaL~aGlp~~vp~~TVnr~C~SGl~Ai~~aa~ 101 (392)
T PRK06633 22 LSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAAN 101 (392)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf 78898899999999999987499989999899991575665666999999976999888726887733799999999999
Q ss_pred HHHHCCCCCCEEEEECCCCC
Q ss_conf 89641556531676302243
Q gi|254780497|r 126 YIRSGVVRRVMVIGSDTFSR 145 (324)
Q Consensus 126 li~~g~~~~~Lvv~~e~~S~ 145 (324)
.|++|..+.++..+.|.+|.
T Consensus 102 ~I~~G~~dvviaGGvEsmS~ 121 (392)
T PRK06633 102 SIMTGDNEIVIAGGQENMSL 121 (392)
T ss_pred HHHCCCCCEEEEECCCCCCC
T ss_conf 99679986777403354554
No 93
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.46 E-value=2e-12 Score=99.08 Aligned_cols=100 Identities=16% Similarity=0.143 Sum_probs=83.1
Q ss_pred CCCCCHHHHHHHHHHHHHHH-HCCCCCCCCEEEEECCCCCC-CCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHH
Q ss_conf 89889999999999999974-02123544336650122334-5898531001122026-864444210122003467888
Q gi|254780497|r 47 GKDETTASLGEAAARDALHH-AEMSVDDIDLIIVATSTPDQ-TFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTA 123 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~-a~~~~~~Id~ii~~s~~~~~-~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A 123 (324)
-++.++.||+..+++.+++| ++++|++||-||+++..+.. .-...+.++.=..|++ ..+++.|+..|.|++.++..|
T Consensus 22 l~~~~~~~L~a~~i~~~l~r~~~l~~~~Id~vi~G~v~~~~~~g~n~aR~aaL~aGlp~~vpa~tVnr~C~SGl~Ai~~A 101 (387)
T PRK08947 22 FRNVRAEDLSAHLMRALLARNPALDPAEIEDIIWGCVQQTLEQGFNIARNAALLAGIPHTVPAVTVNRLCGSSMQALHDA 101 (387)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHH
T ss_conf 78899999999999999974589698998989997066554433359999999769998886166401423799999999
Q ss_pred HHHHHHCCCCCCEEEEECCCCCC
Q ss_conf 99896415565316763022432
Q gi|254780497|r 124 DSYIRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 124 ~~li~~g~~~~~Lvv~~e~~S~~ 146 (324)
...|++|..+-+|+.+.|.+|+.
T Consensus 102 a~~I~~G~~dvvlaGGvEsMS~~ 124 (387)
T PRK08947 102 ARAIMTGDGDVFLIGGVEHMGHV 124 (387)
T ss_pred HHHHCCCCCCEEEEEEECCCCCC
T ss_conf 98652799778998410225778
No 94
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=99.45 E-value=1.7e-12 Score=99.49 Aligned_cols=99 Identities=22% Similarity=0.284 Sum_probs=86.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 98899999999999999740212354433665012233458985310011220268-64444210122003467888998
Q gi|254780497|r 48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTADSY 126 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~~l 126 (324)
.+.++.||+..+.+.+|+|++++|++||-||++.+.+....+..|.+++-..|++. ..++.|+..|.|++.|+..|...
T Consensus 23 ~~~~~~~L~a~~i~~~l~r~~i~p~~Id~Vi~G~v~~~~~~~n~AR~aaL~aGlp~~vp~~TVnr~C~SGl~Ai~~Aa~~ 102 (426)
T PRK08170 23 GPFSASDLAVQAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIGRVAALRLGCGEDVPGWTVQRNCASGMQALDSAARN 102 (426)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 88898999999999999974999899998999933625666779999999769998887267766123799999999999
Q ss_pred HHHCCCCCCEEEEECCCCCC
Q ss_conf 96415565316763022432
Q gi|254780497|r 127 IRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 127 i~~g~~~~~Lvv~~e~~S~~ 146 (324)
|++|..+.+|..+.|.+|+.
T Consensus 103 I~~G~~dvviAGGvEsMS~~ 122 (426)
T PRK08170 103 IALGRADLVLAGGTEALSRA 122 (426)
T ss_pred HHCCCCCEEEEECCCCCCCC
T ss_conf 85599888999372204567
No 95
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=99.45 E-value=1.3e-12 Score=100.17 Aligned_cols=100 Identities=16% Similarity=0.175 Sum_probs=83.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHH-CCCCCCCCEEEEECCCCCCC-CCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHH
Q ss_conf 898899999999999999740-21235443366501223345-898531001122026-864444210122003467888
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHA-EMSVDDIDLIIVATSTPDQT-FPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTA 123 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a-~~~~~~Id~ii~~s~~~~~~-~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A 123 (324)
-.+.++.+|+..+++.+|+|+ +++|++||-||++++.+.-. .+..|..+.-..|++ ...++.|+..|.|++.++..|
T Consensus 21 l~~~~~~~L~a~~i~~~l~r~~~l~~~~Id~vi~G~~~~~g~~g~n~aR~aal~aGlp~~vpa~TVnr~C~SGl~Ai~~A 100 (401)
T PRK09050 21 LSSVRADDLGAVPLKALMERNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTINRLCGSGMDAVGTA 100 (401)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHH
T ss_conf 79998899999999999973589698998959996377657455769999999779998885578601307899999999
Q ss_pred HHHHHHCCCCCCEEEEECCCCCC
Q ss_conf 99896415565316763022432
Q gi|254780497|r 124 DSYIRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 124 ~~li~~g~~~~~Lvv~~e~~S~~ 146 (324)
...|++|..+.+|+.+.|.+|+.
T Consensus 101 a~~I~~G~~dv~iaGGvEsmS~~ 123 (401)
T PRK09050 101 ARAIKAGEAELMIAGGVESMSRA 123 (401)
T ss_pred HHHHHCCCCCEEEEECCCCCCCC
T ss_conf 99984799777986142355656
No 96
>PRK06689 consensus
Probab=99.44 E-value=1e-12 Score=100.93 Aligned_cols=100 Identities=20% Similarity=0.238 Sum_probs=85.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 898899999999999999740212354433665012233458985310011220268-6444421012200346788899
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTADS 125 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~~ 125 (324)
-.+.++.||++.+++.+|++++++|++||-||++.+.+.-..+..|..+.=.-|++. ..++.|+..|.|++.|+..|..
T Consensus 21 l~~~~~~~L~a~~i~~~l~r~gi~p~~Id~vi~G~~~~~g~~~n~AR~aaL~aGlp~~vp~~tVnr~C~Sgl~Ai~~aa~ 100 (391)
T PRK06689 21 LKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTVTGYTIQRQCSSGMQAIMSAAM 100 (391)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHH
T ss_conf 78898899999999999987499979989899980667666660999999976999888706776621578999999999
Q ss_pred HHHHCCCCCCEEEEECCCCCC
Q ss_conf 896415565316763022432
Q gi|254780497|r 126 YIRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 126 li~~g~~~~~Lvv~~e~~S~~ 146 (324)
.|++|..+-++..+.|.+|+.
T Consensus 101 ~I~~G~~dvviAGGvEsMS~~ 121 (391)
T PRK06689 101 QIQLGVSEVVVAGGVEAMSSS 121 (391)
T ss_pred HHHCCCCCEEEEECCCCCCCC
T ss_conf 986799865686043467777
No 97
>PRK07937 lipid-transfer protein; Provisional
Probab=99.42 E-value=3.6e-11 Score=91.08 Aligned_cols=259 Identities=14% Similarity=0.041 Sum_probs=148.8
Q ss_pred CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf 92269999999649841178899988099987811024751889828988999999999999997402123544336650
Q gi|254780497|r 1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVA 80 (324)
Q Consensus 1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~ 80 (324)
|.+|.|.|+|. .|-.+ +. +...+..+|+++|+++||+++|++++|||.++.+
T Consensus 1 MrdVaIVGvG~-t~f~r--------------------------~~-~~~~~~~eL~~eA~~~Al~DAGl~~~DId~~~~g 52 (352)
T PRK07937 1 MRDVAVVGFAH-APHVR--------------------------RT-DGTTNGVEMLMPCFAQLYEELGITKADIGFWCSG 52 (352)
T ss_pred CCCEEEEEEEE-CCCCC--------------------------CC-CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEE
T ss_conf 98579999640-67644--------------------------88-8898999999999999999849998999789671
Q ss_pred CCCCCCCCCCCCCC--HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC---------CC
Q ss_conf 12233458985310--01122026864444210122003467888998964155653167630224322---------24
Q gi|254780497|r 81 TSTPDQTFPSTAVN--IQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIV---------DW 149 (324)
Q Consensus 81 s~~~~~~~p~~a~~--i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~---------d~ 149 (324)
+. ++.....-.. ....||. .+.+.+++.|+++..++..|...|++|.++.+|+++.|..++.. |+
T Consensus 53 ~~--d~~~G~~~~~~~~~~~lg~--~p~~~~~~~~~sg~~Al~~A~~aI~sG~~d~vLvvG~ek~s~g~~~~~~~~~~dp 128 (352)
T PRK07937 53 SS--DYLAGRAFSFISAIDSIGA--VPPINESHVEMDAAWALYEAYIKILTGEVDTALVYGFGKSSAGTLRRVLARQLDP 128 (352)
T ss_pred CC--CCCCCCCHHHHHHHHHCCC--CCCEEEECEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 46--5345410135777764368--7745330102229999999999986789998999873366877533333345781
Q ss_pred --C------------------------------------------CCC------------C-----------CCCCCCCC
Q ss_conf --5------------------------------------------663------------2-----------32345443
Q gi|254780497|r 150 --S------------------------------------------DRS------------T-----------CVLFGDGA 162 (324)
Q Consensus 150 --~------------------------------------------d~~------------~-----------~~lfGDGA 162 (324)
. +|. + +...+|||
T Consensus 129 ~~~~~~~~~~~~~~al~ar~~m~~~g~t~E~lA~Vavkn~~nA~~NP~A~~~~tvedvl~s~~ia~PL~~~dc~p~sDGA 208 (352)
T PRK07937 129 YTVAPLWPDSVSMAGLQARLGLDAGKWTEEQMAEVAADSFADARRNDSAQPSISVDELLARPYFADPLRRHDIAPITDGA 208 (352)
T ss_pred HHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCEECCCCCHHHHCCCCCEE
T ss_conf 13133446278999999999998549999999999999988772198766789999982688355788566508878726
Q ss_pred CEEEEECCCCCCCCCCCCCC--EEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 12344026544654344541--0123203555556177548765444332001032024445577777778888987400
Q gi|254780497|r 163 GALILEGVEVKGSSMADTGI--LSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHL 240 (324)
Q Consensus 163 aA~ll~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl 240 (324)
+|+||.+.+.... ..+..+ ......++.... . .+.+ ...+.......+.+|+
T Consensus 209 aAvVl~s~e~Ar~-l~~~pv~I~g~~~~~~~~~~----------~----------~~dl-----~~~~~~~~aa~~aagi 262 (352)
T PRK07937 209 AAIVLAAGDRARE-LRERPAWITGIEHRIETPAL----------G----------ARDL-----TVSPSTAAAAEAATGG 262 (352)
T ss_pred EEEEEECHHHHHH-CCCCCEEEEEEEEECCCCCC----------C----------CCCC-----CCCHHHHHHHHHHCCC
T ss_conf 9999955999975-66897899998984368877----------7----------6655-----2379999999997499
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH----HHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC-CCC
Q ss_conf 10001210244444158999999719787673365----8651933012699999999980688999899999971-450
Q gi|254780497|r 241 TIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT----VDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMG-GGF 315 (324)
Q Consensus 241 ~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~----~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G-~G~ 315 (324)
+|+|||.+=+|-.--..--.+.|.|||..+ ++.| +-- ||--.|+=+..+.++.++-+=+.|++-+--+.+ +.+
T Consensus 263 ~p~DiDvaElhD~Fs~~el~~~E~LGl~g~-~pVN~sGG~ls-ghp~gAtGl~~~~E~~~ql~~~~~~rqv~~a~~G~~~ 340 (352)
T PRK07937 263 DTGDIDVAELHAPFTHQELILAEAIGLPDK-TKVNPSGGALA-ANPMFAAGLERIGFAARHIWDGSARRALAHATSGPAL 340 (352)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHCCCCCC-CCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
T ss_conf 953475788725750778999884288999-54668986210-6986428999999999998555556325767555122
Q ss_pred CEEE
Q ss_conf 1456
Q gi|254780497|r 316 TSGT 319 (324)
Q Consensus 316 s~~a 319 (324)
..+.
T Consensus 341 q~n~ 344 (352)
T PRK07937 341 QQNL 344 (352)
T ss_pred HCCE
T ss_conf 3137
No 98
>PRK08234 consensus
Probab=99.42 E-value=1.8e-12 Score=99.38 Aligned_cols=99 Identities=16% Similarity=0.223 Sum_probs=84.3
Q ss_pred CCCCHHHHHHHHHHHHHHHH-CCCCCCCCEEEEECCCCCCC-CCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 98899999999999999740-21235443366501223345-898531001122026-8644442101220034678889
Q gi|254780497|r 48 KDETTASLGEAAARDALHHA-EMSVDDIDLIIVATSTPDQT-FPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTAD 124 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a-~~~~~~Id~ii~~s~~~~~~-~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~ 124 (324)
.+.++.+|++.+++.+++|. +++|++||-||++.+.+... .+..+..+.-.-|++ ...++.|+..|.|++.|+..|.
T Consensus 22 ~~~~~~~L~a~~i~~~l~r~~~~~~~~Id~vi~G~v~~~g~~~~n~aR~aaL~aGlp~~vpa~tVnr~C~SGl~Ai~~Aa 101 (400)
T PRK08234 22 RDVRPDDLAAVVIRALIERNPNVPVEQIDDVVFGNANQAGEDNRNVARMAALLAGLPVEVAGVTVNRLCGSGLDAVAYAA 101 (400)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHH
T ss_conf 88988999999999999746896989989899990676564446699999997699988861677153035999999999
Q ss_pred HHHHHCCCCCCEEEEECCCCCC
Q ss_conf 9896415565316763022432
Q gi|254780497|r 125 SYIRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 125 ~li~~g~~~~~Lvv~~e~~S~~ 146 (324)
..|++|..+.+|+.+.|.+|+.
T Consensus 102 ~~I~~G~~dvviagGvEsmS~~ 123 (400)
T PRK08234 102 RAIWAGEGEIMIAGGTESMTRA 123 (400)
T ss_pred HHHHCCCCCEEEECCCCCCCCC
T ss_conf 9985899757885152443436
No 99
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=99.40 E-value=1.6e-11 Score=93.24 Aligned_cols=100 Identities=14% Similarity=0.090 Sum_probs=84.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 898899999999999999740212354433665012233458985310011220268-6444421012200346788899
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTADS 125 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~~ 125 (324)
-.+.++.||+..+++.+|+|++++|++||-||++++.+.-..+..|..+.=.-|++. ..++.|+..|.|++.++..|..
T Consensus 26 l~~~~~~~L~~~~i~~~l~r~gi~~~~iD~vi~G~v~~~g~~~n~aR~~aL~aGlp~~vp~~TVnr~C~SGl~Ai~~Aa~ 105 (428)
T PRK09268 26 YADASNQDMLTAALDGLVERFGLHGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPETPAYDLQQACGTGLEAAILVAN 105 (428)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHH
T ss_conf 78898899999999999998299989999899993576565653999999966989888726885275799999999999
Q ss_pred HHHHCCCCCCEEEEECCCCCC
Q ss_conf 896415565316763022432
Q gi|254780497|r 126 YIRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 126 li~~g~~~~~Lvv~~e~~S~~ 146 (324)
.|++|..+.++..+.|.+|+.
T Consensus 106 ~I~~G~~dvviAGGvEsmS~~ 126 (428)
T PRK09268 106 KIALGQIDSGIAGGVDTTSDA 126 (428)
T ss_pred HHHCCCCCEEEEECCCCCCCC
T ss_conf 998799988999461235678
No 100
>PRK07855 lipid-transfer protein; Provisional
Probab=99.40 E-value=5.2e-11 Score=90.05 Aligned_cols=253 Identities=14% Similarity=0.142 Sum_probs=141.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCC-CCCCCCCCHHHHHHHHHHH
Q ss_conf 988999999999999997402123544336650122334589853100112202686444-4210122003467888998
Q gi|254780497|r 48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAF-DMQAVCSGFVYAVTTADSY 126 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~-di~~~C~~~~~al~~A~~l 126 (324)
++.+..+|+.+|+++||+++|++++|||.+++.+.. ..+ ...+.+.+|+.+...+ .+..+|+++..++..|...
T Consensus 20 ~~~s~~~L~~eA~~~AL~DAGl~~~dIDg~~~~~~~---~~~--~~~ia~~lG~~~~~~~~~v~~~g~s~~~~~~~A~~a 94 (386)
T PRK07855 20 SGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMD---TNP--EIAVARAVGIGELKFFSQIGYGGGAACATVQQAAMA 94 (386)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECC---CCC--HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 998999999999999999759999996999896078---882--899999719988753221478855799999999999
Q ss_pred HHHCCCCCCEEEEECCCCC-------------------------------------------CC----------------
Q ss_conf 9641556531676302243-------------------------------------------22----------------
Q gi|254780497|r 127 IRSGVVRRVMVIGSDTFSR-------------------------------------------IV---------------- 147 (324)
Q Consensus 127 i~~g~~~~~Lvv~~e~~S~-------------------------------------------~~---------------- 147 (324)
|++|.++.+|++.++.... +.
T Consensus 95 IasG~~d~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~G~~~p~~~~Al~a~rym~~yG~t~E~lA~Vavk 174 (386)
T PRK07855 95 VATGVADVVVAYRAFNERSGMRFGQVQTGLATNPTSEGVDYGWSYPHGLLTPAAWVAMIARRYMHEYGATSEDFGRVAVA 174 (386)
T ss_pred HHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 97387778999974146763223667555555533233331100234677668899999999999979599999999999
Q ss_pred -------C----CCCC-CC------------------CCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCE
Q ss_conf -------2----4566-32------------------3234544312344026544654344541012320355555617
Q gi|254780497|r 148 -------D----WSDR-ST------------------CVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKL 197 (324)
Q Consensus 148 -------d----~~d~-~~------------------~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (324)
| +..+ -+ +...+|||+|+||.+.+.........-.+.......+ .+..
T Consensus 175 nr~nA~~NP~A~~~~~~iT~edvl~S~~Ia~PL~lldc~~~sDGAaAvVl~s~e~A~~~~~~pv~i~~~~~g~~--~~~~ 252 (386)
T PRK07855 175 DRKHAATNPKAFFYGKPITLEDHQNSRWIAEPLRLLDCCQETDGAVAIVVTSAERARDLKQRPAVIEAAAQGSG--ADQY 252 (386)
T ss_pred HHHHHHCCCHHHHCCCCCCHHHHHCCCCCCCCCHHHHCCCCCCCEEEEEEECHHHHHHCCCCCEEEEEEEEEEC--CCCC
T ss_conf 99987419598873789889998516671665457553887884389999449999756899779999998713--6765
Q ss_pred EECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH----HHH
Q ss_conf 7548765444332001032024445577777778888987400100012102444441589999997197876----733
Q gi|254780497|r 198 YVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD----KVI 273 (324)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e----~~~ 273 (324)
......+.+ + ...+......+++++++|++++|||.+-+|-.--..--...|.||+-+. +++
T Consensus 253 ---------~~~~~~~~d---~--~~~~~~~~aa~~ay~~AGi~p~DiDv~e~~D~Ft~~el~~lE~lG~c~~Ge~~~~v 318 (386)
T PRK07855 253 ---------TMTSYYRDD---L--TGLPEMGLVARQLWRQSGLGPADIQTAILYDHFTPFVLMQLEELGFCGRGEAKDFI 318 (386)
T ss_pred ---------CCCCCCCCC---C--CCCCHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHHHHHHHHHCCCCCCCCHHHHH
T ss_conf ---------544334564---4--45627999999999984999788726763067709999999984998898379999
Q ss_pred H------------H----HHHHCCCHHHHHHHHHHHHHHC---CCCCCCCEEEEEEECCCCCEEEEEE
Q ss_conf 6------------5----8651933012699999999980---6889998999999714501456878
Q gi|254780497|r 274 V------------T----VDIHGNTSAASIPLALAVAVKE---GRVKKGDCLLLEAMGGGFTSGTVLL 322 (324)
Q Consensus 274 ~------------~----~~~~Gn~~sas~~~~L~~~~~~---g~l~~Gd~vll~~~G~G~s~~a~ll 322 (324)
. | +--.||...++-.....+-++- +++ +|-+..|+.-|.|...++++|
T Consensus 319 ~~G~~~~~G~~PvN~sGGlls~gh~~G~~gv~Eav~QLrG~A~~QV-~~a~~alv~~~gG~~~~~~~l 385 (386)
T PRK07855 319 ADGAIEIGGRLPINTHGGQLGEAYIHGMNGIAEAVRQLRGTSVNQV-PGVEHVLVTAGTGVPTSGLIL 385 (386)
T ss_pred HCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCCC-CCHHEEEEECCCCHHHHHHCC
T ss_conf 7799557997146589700146764307789999999748641359-940458893898444433015
No 101
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.34 E-value=1.3e-11 Score=93.90 Aligned_cols=270 Identities=15% Similarity=0.164 Sum_probs=148.9
Q ss_pred CCCCHHHHHHHHHHHHHHHH-CCCCCCCCEEEEECCCCCCC-CCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHH
Q ss_conf 98899999999999999740-21235443366501223345-8985310011220268-644442101220034678889
Q gi|254780497|r 48 KDETTASLGEAAARDALHHA-EMSVDDIDLIIVATSTPDQT-FPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTAD 124 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a-~~~~~~Id~ii~~s~~~~~~-~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~ 124 (324)
.+.++.+|+..+++.+|+|+ +++|++||-||++++.+.-. -...+.+.+-.-|++. ..++.|+..|.|++.|+..|.
T Consensus 27 ~~~~~~~L~a~~i~~~l~r~~~l~~~~Id~vi~G~~~~~~~~g~n~aR~aal~aGlp~~vp~~tVnr~C~SGl~Ai~~Aa 106 (399)
T PRK09052 27 KNTRPDDLLAHVLRAAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVNRFCASGLQAVAMAA 106 (399)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHH
T ss_conf 88998999999999999865797989989799970644565566899999997599988871578651336899999999
Q ss_pred HHHHHCCCCCCEEEEECCCCCCCCCCCC------------CCCCCCCCCCCEE------EEECCCCCC------------
Q ss_conf 9896415565316763022432224566------------3232345443123------440265446------------
Q gi|254780497|r 125 SYIRSGVVRRVMVIGSDTFSRIVDWSDR------------STCVLFGDGAGAL------ILEGVEVKG------------ 174 (324)
Q Consensus 125 ~li~~g~~~~~Lvv~~e~~S~~~d~~d~------------~~~~lfGDGAaA~------ll~~~~~~~------------ 174 (324)
..|++|..+-+++.+.|.+|+.--..++ ....-++-|-+|= =++|++...
T Consensus 107 ~~I~~G~~dvviaGG~EsMS~~P~~~~~~~~~~~~~~~~~~~~~~~~Mg~tAE~~A~~~~isRe~qD~~A~~Sh~rA~~A 186 (399)
T PRK09052 107 DRIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDENVGIAYGMGLTAEKVAEQWKVSREDQDAFALESHQKAIAA 186 (399)
T ss_pred HHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99868998889861520246686567877778044236867544446888999999996989999999999999999998
Q ss_pred --CCCCCCCCEEEEEEC---CCCC------CCCEEECCCCCCCC-------CCCCHHH-------------CCHH-----
Q ss_conf --543445410123203---5555------56177548765444-------3320010-------------3202-----
Q gi|254780497|r 175 --SSMADTGILSTYLCS---DGSY------IDKLYVDGGPSTSR-------TVGCIRM-------------EGKA----- 218 (324)
Q Consensus 175 --~~~~~~~~~~~~~~~---~~~~------~~~~~~~~~~~~~~-------~~~~~~~-------------~g~~----- 218 (324)
......+++...... +... ...+..+.+..... ....|+. ||-.
T Consensus 187 ~~~G~f~~EIvPv~v~~~~~~~~~~~~~~~~~~~~~De~~R~~tt~e~La~Lkp~F~~~GtvTAgNsS~lsDGAAavll~ 266 (399)
T PRK09052 187 QQAGEFKDEITPYEIVERFPDLATGEIDVKTRTIDLDEGPRADTSLEGLAKLKPVFANKGSVTAGNSSQTSDGAGAVILV 266 (399)
T ss_pred HHCCCCHHHEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCCCEECHHCCCCCCHHHHHHHH
T ss_conf 76597532164478422456654453234545754688867897888872467752799857842358443067888773
Q ss_pred ----HH--------------------HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH
Q ss_conf ----44--------------------455777777788889874001000121024444415899999971978767336
Q gi|254780497|r 219 ----VF--------------------KYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIV 274 (324)
Q Consensus 219 ----~~--------------------~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~ 274 (324)
.. ......-...+.++|+++||+++|||+|=+|-+-....-.+.+.|++++||+..
T Consensus 267 s~~~a~~~gl~plAri~~~~~~g~~P~~m~~gPv~A~~k~L~~agl~~~Did~~EinEAFA~~~l~~~~~l~id~~kvN~ 346 (399)
T PRK09052 267 SEKALKQFNLTPLARFVSFAVAGVPPEIMGIGPIEAIPAALKQAGLKQDDLDWIELNEAFAAQSLAVIRDLGLDPSKVNP 346 (399)
T ss_pred HHHHHHHCCCCEEEEEEEEEEEECCHHHHCCCHHHHHHHHHHHCCCCHHHCCEEEEHHHHHHHHHHHHHHHCCCHHHCCC
T ss_conf 49999976997279999547998287885768999999999983998667787886034388899999982997989699
Q ss_pred H--HHHHCCCHH---HHHHHHHHHHHHCCCCCCCCEEEE-EEECCCCCEEEE
Q ss_conf 5--865193301---269999999998068899989999-997145014568
Q gi|254780497|r 275 T--VDIHGNTSA---ASIPLALAVAVKEGRVKKGDCLLL-EAMGGGFTSGTV 320 (324)
Q Consensus 275 ~--~~~~Gn~~s---as~~~~L~~~~~~g~l~~Gd~vll-~~~G~G~s~~a~ 320 (324)
+ -=-+||=.. +-+...|-+.++. +.+.+.+. ...|.|.-...+
T Consensus 347 ~GGaiAlGHP~GasGari~~tl~~~L~~---~~~~~G~~s~C~ggG~g~A~~ 395 (399)
T PRK09052 347 LGGAIALGHPLGATGAIRTATVVHGLRR---TNLKYGMVTMCVGTGMGAAGI 395 (399)
T ss_pred CCCHHHHCCCCCCCHHHHHHHHHHHHHH---CCCCEEEEEECCCCCCEEEEE
T ss_conf 8778874887031099999999999987---099989999724445077999
No 102
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.34 E-value=6.1e-11 Score=89.61 Aligned_cols=99 Identities=21% Similarity=0.269 Sum_probs=81.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC-CCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHH
Q ss_conf 8988999999999999997402123544336650122334-58985310011220268-644442101220034678889
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQ-TFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTAD 124 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~-~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~ 124 (324)
-.+.++.+|+..+++.+|+|++++ .+||-||++...+.- .-...+.++.-.-|++. ..++.|+..|.|++.++..|.
T Consensus 16 l~~~~~~~L~a~~i~~~l~r~~i~-~~id~vi~G~~~~~~~~g~n~aR~aal~aGlp~~vp~~TVnr~C~SGl~Ai~~aa 94 (384)
T PRK07661 16 LKTVRPDDLGALVVKETLKRANYE-GPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITINRYCSSGLQSIAYGA 94 (384)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCC-CCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHH
T ss_conf 899999999999999999860989-6359699994766465566699999997699988772677350216899999999
Q ss_pred HHHHHCCCCCCEEEEECCCCCC
Q ss_conf 9896415565316763022432
Q gi|254780497|r 125 SYIRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 125 ~li~~g~~~~~Lvv~~e~~S~~ 146 (324)
..|++|..+-+|..+.|.+|+.
T Consensus 95 ~~I~~G~~dvviAGGvEsMS~~ 116 (384)
T PRK07661 95 ERIMLGHSEAVLAGGAESMSLV 116 (384)
T ss_pred HHHHCCCCCEEEECCEECCCCC
T ss_conf 9997699767875462122578
No 103
>TIGR02845 spore_V_AD stage V sporulation protein AD; InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation ..
Probab=99.33 E-value=2.2e-11 Score=92.46 Aligned_cols=235 Identities=20% Similarity=0.297 Sum_probs=152.1
Q ss_pred CCCHHHHH-----HHHHHHHHHHHCCCCC--CCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 88999999-----9999999974021235--4433665012233458985310011220268644442101220034678
Q gi|254780497|r 49 DETTASLG-----EAAARDALHHAEMSVD--DIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVT 121 (324)
Q Consensus 49 ~e~~~~la-----~~Aa~~al~~a~~~~~--~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~ 121 (324)
+|++.+|| .+|++.||+|+++..+ +||+++-+= ...+.. +++.+++.||+|- |-+=++||-++-+|-
T Consensus 42 ge~SwEkAEr~lm~~Av~~aL~Ka~l~~~PP~vD~~LAGD-LLNQ~~--~anFvAR~L~iPf---lGLygACsTs~E~L~ 115 (331)
T TIGR02845 42 GEDSWEKAERKLMEDAVNLALKKANLKKDPPDVDFFLAGD-LLNQII--TANFVARELGIPF---LGLYGACSTSMETLA 115 (331)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHH-HHHHHH--HHHHHHHHCCCCC---EECCCHHHHHHHHHH
T ss_conf 7201899999999999999875358712787211120103-666789--9989887458882---340213578999999
Q ss_pred HHHHHHHHCCCCCCEEEEECCCC---CCCCC-C----C-CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 88998964155653167630224---32224-5----6-63232345443123440265446543445410123203555
Q gi|254780497|r 122 TADSYIRSGVVRRVMVIGSDTFS---RIVDW-S----D-RSTCVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGS 192 (324)
Q Consensus 122 ~A~~li~~g~~~~~Lvv~~e~~S---~~~d~-~----d-~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (324)
++..+|..|-.+++|.-.+--++ |=++| + + |.++-.-==||+|+||++.+...+ | .. -|-|+
T Consensus 116 ~gA~lv~GGfAd~vLaAtSSHy~taERQFRYPTEyG~Qkp~tAq~TVTGAGA~~l~~~~~~~~------i-t~--aT~Gk 186 (331)
T TIGR02845 116 LGAMLVDGGFADRVLAATSSHYATAERQFRYPTEYGVQKPPTAQWTVTGAGAVLLASTGGGPR------I-TS--ATIGK 186 (331)
T ss_pred HHHHHHHCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHEEEECCCCCCCE------E-EE--EEEEE
T ss_conf 999998320022111121111353221025651256115998861250346486544789436------4-14--53014
Q ss_pred CCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC---CCHHHHHHHHHHC-CCC
Q ss_conf 556177548765444332001032024445577777778888987400100012102444---4415899999971-978
Q gi|254780497|r 193 YIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQ---ANWRIINSIVDKM-KIP 268 (324)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq---~~~~~~~~~~~~l-gl~ 268 (324)
-.| .|-..+.+.+ .-+.+...+.|...|++.|.+++|.|.+++=- .++.|.+.++++= |++
T Consensus 187 V~D-----~G~~dP~~mG----------~AMAPAAaDTI~~Hf~dtg~~~~DYDLIvTGDL~rvG~~I~~~LL~e~yg~~ 251 (331)
T TIGR02845 187 VVD-----LGLTDPLDMG----------AAMAPAAADTIEAHFKDTGRSVDDYDLIVTGDLARVGSEILRKLLKEEYGYD 251 (331)
T ss_pred EEE-----CCCCCCCCHH----------HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCC
T ss_conf 771-----2336864113----------5412689999999998707880401367873300214899999988860875
Q ss_pred HHHHHH-----HH----HHH-----CCCHHHHHHHH-HHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf 767336-----58----651-----93301269999-99999806889998999999714501
Q gi|254780497|r 269 FDKVIV-----TV----DIH-----GNTSAASIPLA-LAVAVKEGRVKKGDCLLLEAMGGGFT 316 (324)
Q Consensus 269 ~e~~~~-----~~----~~~-----Gn~~sas~~~~-L~~~~~~g~l~~Gd~vll~~~G~G~s 316 (324)
-.+-+. .+ ++. |--.||.+... |=+-+++|+| .|+|+++.|+=+|
T Consensus 252 ~~~~Y~DCG~~IY~~dqqdV~AGGSG~ACSAvV~yGyll~~l~~G~l---~k~LvvaTGALLS 311 (331)
T TIGR02845 252 VTEKYDDCGVMIYRPDQQDVFAGGSGCACSAVVTYGYLLKELKRGKL---KKVLVVATGALLS 311 (331)
T ss_pred CCCEECCCCEEEECCCCCCCCCCCCCCCHHHEEHHHHHHHHHHCCCC---EEEEEEECCHHHH
T ss_conf 00010456467533887810577856650332113789999836971---2788885103322
No 104
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=99.33 E-value=2.6e-10 Score=85.52 Aligned_cols=248 Identities=18% Similarity=0.116 Sum_probs=145.4
Q ss_pred CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCC-CC-CCCCEEE
Q ss_conf 922699999996498411788999880999878110247518898289889999999999999974021-23-5443366
Q gi|254780497|r 1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEM-SV-DDIDLII 78 (324)
Q Consensus 1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~-~~-~~Id~ii 78 (324)
|++|.|.|+|.. |-.+ + .++.+..+|+.+|+++||+++|+ +| .|||.++
T Consensus 1 M~~VaIvGvG~t-~f~~--------------------------~--~~d~s~~eL~~eA~~~Al~DAG~~~~~~did~~~ 51 (375)
T PRK06066 1 MMRVAIVGIGWY-GFKP--------------------------T--TPDLSFREMMFEAAVRAYEDAGGINPRRDVDAFI 51 (375)
T ss_pred CCEEEEEECCCC-CCCC--------------------------C--CCCCCHHHHHHHHHHHHHHHCCCCCCHHHEEEEE
T ss_conf 970899961367-7689--------------------------9--9998999999999999999679998665600676
Q ss_pred EECCCCCCCCC-CCC-CCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC--------
Q ss_conf 50122334589-853-10011220268644442101220034678889989641556531676302243222--------
Q gi|254780497|r 79 VATSTPDQTFP-STA-VNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVD-------- 148 (324)
Q Consensus 79 ~~s~~~~~~~p-~~a-~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d-------- 148 (324)
.+. +++... ..+ ....+.+|.... .+...|+++..++..|...|++|.++.+||++.+..+....
T Consensus 52 ~~~--~~~~~g~~~~~~~~~~~lG~~~~---p~~~v~~~G~~al~~A~~aIaSG~~dvvlv~g~~k~s~~~~~~~~~~~~ 126 (375)
T PRK06066 52 SCQ--EDFWEGIAISDEFAPDPIGGAMR---PTMTVAGDGLQGLAHAYMHINSGLADVVVVESHAKPSDILTFPDVVKFA 126 (375)
T ss_pred ECC--CCCCCCHHHHHHHHHHHHCCCCC---CEEEEECHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHCC
T ss_conf 613--33344055787765876246678---5488527799999999999971988889997044667766511144404
Q ss_pred ----CCC-------------------------------------------CC--------------C-----------CC
Q ss_conf ----456-------------------------------------------63--------------2-----------32
Q gi|254780497|r 149 ----WSD-------------------------------------------RS--------------T-----------CV 156 (324)
Q Consensus 149 ----~~d-------------------------------------------~~--------------~-----------~~ 156 (324)
|.. |. + +.
T Consensus 127 ~d~~~~~~~g~~~~~~~~al~A~rym~~yG~t~E~lA~vavk~r~~A~~NP~A~~~~~~t~edvl~s~~ia~PL~~~dc~ 206 (375)
T PRK06066 127 MDPIYLRPLGPPNPHFLAGLEAVKFMARRGVTREDLALVVEKNKKAGLKNPRASYASNVSLDDVLSSEYVVYPLTELDIA 206 (375)
T ss_pred CCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHCCCCCEECCCCCCCCC
T ss_conf 68550023687659999999999999886979999999999999988539840306999999980797650575300226
Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCCC--EEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf 34544312344026544654344541--0123203555556177548765444332001032024445577777778888
Q gi|254780497|r 157 LFGDGAGALILEGVEVKGSSMADTGI--LSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKV 234 (324)
Q Consensus 157 lfGDGAaA~ll~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~ 234 (324)
..+|||+|+||.+.+.... ..+..+ ......++.... ...... .........+++
T Consensus 207 ~~sDGAaA~Vv~s~~~A~~-~~~~pv~i~g~g~~~~~~~~----------~~~~~~------------~~~~~~~a~~~A 263 (375)
T PRK06066 207 PFVDGAIVVVLASEEVARK-LTDTPVWIKGIGWATDTSNL----------ETADLG------------KAMYMRKAADMA 263 (375)
T ss_pred CCCCCEEEEEEECHHHHHH-CCCCCEEEEEEEEECCCCCC----------CCCCCC------------CCHHHHHHHHHH
T ss_conf 6768428999935899975-68998899999985268776----------622345------------336899999999
Q ss_pred HHHHHCCC--CCCCCCCCCCCCHHHHHHHHHHCCCCHHH--HH------------HH----HHHHCCCHHHHHHHHHHHH
Q ss_conf 98740010--00121024444415899999971978767--33------------65----8651933012699999999
Q gi|254780497|r 235 FDSTHLTI--ENIDWFVPHQANWRIINSIVDKMKIPFDK--VI------------VT----VDIHGNTSAASIPLALAVA 294 (324)
Q Consensus 235 L~~~gl~~--~did~~~~Hq~~~~~~~~~~~~lgl~~e~--~~------------~~----~~~~Gn~~sas~~~~L~~~ 294 (324)
.+.+|++. +|||.+-+|-.-....-...|.||+..+- ++ .| +--+||...++=+..+.++
T Consensus 264 y~~Agi~~p~~DiDv~elyD~ft~~~l~~lE~lG~~geg~~~~~~G~~~~~G~~PvNtsGG~ls~Ghp~ga~G~~~~~E~ 343 (375)
T PRK06066 264 YKMAGIASPAKEVDFAFVDDRYSYKELQHIEALGLAGKAAKDLREGYFEPGGELPVNPSGGHLAKGVPLEASGLSLLLDA 343 (375)
T ss_pred HHHCCCCCCHHHCCEEEECCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEECCCCHHHCCCCCCHHHHHHHHHH
T ss_conf 99807999866661557516661999999998489842889997799567998206089824428985750699999999
Q ss_pred HHCCCCCCCCE
Q ss_conf 98068899989
Q gi|254780497|r 295 VKEGRVKKGDC 305 (324)
Q Consensus 295 ~~~g~l~~Gd~ 305 (324)
.++-+=+.|++
T Consensus 344 ~~QLrg~ag~R 354 (375)
T PRK06066 344 VEYLRQGGVER 354 (375)
T ss_pred HHHHHCCCCCC
T ss_conf 99974353043
No 105
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=99.32 E-value=1e-10 Score=88.21 Aligned_cols=100 Identities=17% Similarity=0.167 Sum_probs=83.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHH-CCCCCCCCEEEEECCCCCCC-CCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHH
Q ss_conf 898899999999999999740-21235443366501223345-8985310011220268-64444210122003467888
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHA-EMSVDDIDLIIVATSTPDQT-FPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTA 123 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a-~~~~~~Id~ii~~s~~~~~~-~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A 123 (324)
-.+.++.||+..+.+.+++|+ +++|++||-||++.+.+... .+..+..+.-..|++. ..++.|+..|.|++.|+..|
T Consensus 21 l~~~~~~~L~a~~i~~~l~r~~~i~~~~Id~Vi~G~~~~~g~~g~n~aR~~aL~aGlp~~vpa~TVnr~C~SGl~Ai~~a 100 (400)
T PRK13359 21 LSSVRADDLGAVPLKALVERNRDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGTTINRLCGSGMDAVGVA 100 (400)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHH
T ss_conf 79998899999999999972699798999979998277556545768999999769998876267613211499999999
Q ss_pred HHHHHHCCCCCCEEEEECCCCCC
Q ss_conf 99896415565316763022432
Q gi|254780497|r 124 DSYIRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 124 ~~li~~g~~~~~Lvv~~e~~S~~ 146 (324)
...|++|..+-+|..+.|.+|+.
T Consensus 101 a~~I~~G~~dvviAGGvEsmS~~ 123 (400)
T PRK13359 101 ARAIKSGEAALMIAGGVESMSRA 123 (400)
T ss_pred HHHHHCCCCCEEEECCEECCCCC
T ss_conf 99985799887885155115556
No 106
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.24 E-value=2.4e-10 Score=85.77 Aligned_cols=267 Identities=18% Similarity=0.176 Sum_probs=141.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 89889999999999999974021235443366501223345898531001122026-86444421012200346788899
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADS 125 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~ 125 (324)
-.+.++.||+..+++.+.++ .|++||-||++.+.+. -...+.++.-..|++ ...++.|+..|.|++.|+..|..
T Consensus 20 l~~~~~~~L~~~~i~~l~~~---~~~~Id~vi~G~v~~~--g~n~aR~aaL~aGlp~~vp~~tVnr~C~SGl~Av~~aa~ 94 (361)
T PRK06690 20 LKDYEVQQLAAPLLTFLSKG---MERAIDDVILGNVVGP--GGNVARLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACH 94 (361)
T ss_pred CCCCCHHHHHHHHHHHHHHC---CCCCCCEEEEEECCCC--CCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHH
T ss_conf 78998899999999999727---9111685999956776--750999999975999888758887531588999999999
Q ss_pred HHHHCCCCCCEEEEECCCCCCCCCC-CCCCCCCCCCC---CCEEE------EECCCCCC--------------CCCCCCC
Q ss_conf 8964155653167630224322245-66323234544---31234------40265446--------------5434454
Q gi|254780497|r 126 YIRSGVVRRVMVIGSDTFSRIVDWS-DRSTCVLFGDG---AGALI------LEGVEVKG--------------SSMADTG 181 (324)
Q Consensus 126 li~~g~~~~~Lvv~~e~~S~~~d~~-d~~~~~lfGDG---AaA~l------l~~~~~~~--------------~~~~~~~ 181 (324)
.|++|..+-++..+.|.+|+.--.. .+.....++|- -+|-. +++.+... ......+
T Consensus 95 ~I~~G~~dvviAGGvEsmS~~P~~~~~~~~~~~~~d~~MG~tAE~vA~~~~isRe~qDe~A~~Sh~rA~~A~~~G~f~~E 174 (361)
T PRK06690 95 FIQGGAGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKGYIHEE 174 (361)
T ss_pred HHHCCCCCEEEECCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99679999899847014012521145677854347965899999999984979999999999989999999874985211
Q ss_pred CEEEE------EECCCCCCCC------EEECCCC-----CCCCCCC---CHHH-------CCHH-H------------HH
Q ss_conf 10123------2035555561------7754876-----5444332---0010-------3202-4------------44
Q gi|254780497|r 182 ILSTY------LCSDGSYIDK------LYVDGGP-----STSRTVG---CIRM-------EGKA-V------------FK 221 (324)
Q Consensus 182 ~~~~~------~~~~~~~~~~------~~~~~~~-----~~~~~~~---~~~~-------~g~~-~------------~~ 221 (324)
++... ...+.+.... ...+.+. ......+ .+-+ .|-. + ..
T Consensus 175 IvPv~~~~de~~~~~~~~e~ll~~l~P~f~~~GtvTAgNsS~~sDGAAavll~se~~A~~~gl~p~ariv~~a~~g~~P~ 254 (361)
T PRK06690 175 ILSFNGLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDPN 254 (361)
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEECCCCCCCCCHHHHHHHHCHHHHHHCCCCCEEEEEEEEEEEECHH
T ss_conf 37666512566789987798863289853678844342167300078999985799999779980699986789974835
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH--HHHCCCH---HHHHHHHHHHHHH
Q ss_conf 5577777778888987400100012102444441589999997197876733658--6519330---1269999999998
Q gi|254780497|r 222 YAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTV--DIHGNTS---AASIPLALAVAVK 296 (324)
Q Consensus 222 ~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~--~~~Gn~~---sas~~~~L~~~~~ 296 (324)
.....-...++++|+++|++++|||.|=+|-+--...-...+.|++++||+..+- =-+||=- .+-+...|-+.++
T Consensus 255 ~m~~~Pi~A~~~~L~~agl~~~Did~~EinEAFA~q~l~~~~~l~id~~kvN~~GGaiAlGHP~GasGaRi~~tl~~~L~ 334 (361)
T PRK06690 255 LPGTGPIFAVNKLLNEMNMKVEDIDYFEINEAFASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAK 334 (361)
T ss_pred HCCCCHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf 54825699999999975997122651120267788899999983898888499855887488803458999999999998
Q ss_pred CCCCCCCCEEEE-EEECCCCCEEEEEE
Q ss_conf 068899989999-99714501456878
Q gi|254780497|r 297 EGRVKKGDCLLL-EAMGGGFTSGTVLL 322 (324)
Q Consensus 297 ~g~l~~Gd~vll-~~~G~G~s~~a~ll 322 (324)
. +.|.+.+. ...|.|.-. ++++
T Consensus 335 ~---~~~~~Gl~s~C~ggG~g~-A~ii 357 (361)
T PRK06690 335 R---ERMKYGIATLGIGGGIGL-ALLF 357 (361)
T ss_pred H---CCCCEEEEEECCCCCHHH-EEEE
T ss_conf 7---199989999633023314-7999
No 107
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.17 E-value=1.9e-09 Score=80.08 Aligned_cols=215 Identities=18% Similarity=0.181 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHHHCCCCCCCCE----EEEECCCCCCCCCC-------------------CCCCHHHHHHCCCCCCCCCCC
Q ss_conf 9999999999740212354433----66501223345898-------------------531001122026864444210
Q gi|254780497|r 55 LGEAAARDALHHAEMSVDDIDL----IIVATSTPDQTFPS-------------------TAVNIQNRLGMKRGFAFDMQA 111 (324)
Q Consensus 55 la~~Aa~~al~~a~~~~~~Id~----ii~~s~~~~~~~p~-------------------~a~~i~~~LGl~~~~~~di~~ 111 (324)
|..+-+-++|+++|+.|+.+.. |..+....+|.... .+++|...|+++ .+.+.|..
T Consensus 94 llLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~-GPs~~vdt 172 (1061)
T COG3321 94 LLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLS-GPSVTVDT 172 (1061)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHCCCHHEEECC-CCCCCCCC
T ss_conf 99999999999759992225674248996565666444232221235522102542202101012204345-78542223
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC---------CCC--CC-------CCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf 12200346788899896415565316763022---------432--22-------4566323234544312344026544
Q gi|254780497|r 112 VCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF---------SRI--VD-------WSDRSTCVLFGDGAGALILEGVEVK 173 (324)
Q Consensus 112 ~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~---------S~~--~d-------~~d~~~~~lfGDGAaA~ll~~~~~~ 173 (324)
+|++.+.|+++|+..|.+|++..+|+-+.... ++. +. +......+..|.|+++++|.+-...
T Consensus 173 aCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG~g~vvLKrl~~A 252 (1061)
T COG3321 173 ACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAGVVVLKRLSDA 252 (1061)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEHHHH
T ss_conf 67678999999999875487201320222103586044434430355866775787555786687214689986258878
Q ss_pred CCCC--CCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 6543--44541012320355555617754876544433200103202444557777777888898740010001210244
Q gi|254780497|r 174 GSSM--ADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPH 251 (324)
Q Consensus 174 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~H 251 (324)
.... ...-+..+....||+.. +.... ......+++++.|+++++++++|+++=.|
T Consensus 253 ~~dgd~IyavI~gsavn~dG~~~---------------gltaP--------~~~aQ~~v~~~al~~a~i~p~tv~yvEaH 309 (1061)
T COG3321 253 ERDGDRIYAVIRGSAVNQDGRSN---------------GLTAP--------NLEAQADVIREALADAGIDPATVQYVEAH 309 (1061)
T ss_pred HHCCCEEEEEEEEEEEECCCCCC---------------CCCCC--------CHHHHHHHHHHHHHHCCCCCCCCEEEEEC
T ss_conf 75799179999502550577656---------------74478--------88899999999998559990335167611
Q ss_pred CCCHHH-----HHHHHHHCCCC-HHHHH---HHHHHHCCCHHHHHHHHHHH
Q ss_conf 444158-----99999971978-76733---65865193301269999999
Q gi|254780497|r 252 QANWRI-----INSIVDKMKIP-FDKVI---VTVDIHGNTSAASIPLALAV 293 (324)
Q Consensus 252 q~~~~~-----~~~~~~~lgl~-~e~~~---~~~~~~Gn~~sas~~~~L~~ 293 (324)
..+... +..+.+..+-. +++.. +.-.++||+.+|.=...|-+
T Consensus 310 gTGT~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK 360 (1061)
T COG3321 310 GTGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIK 360 (1061)
T ss_pred CCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 477656478999889998603576773001211102367788879999999
No 108
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.17 E-value=7.1e-10 Score=82.79 Aligned_cols=231 Identities=24% Similarity=0.339 Sum_probs=132.9
Q ss_pred CCEEEEEEEEEECCCCEECHHH-HHHHH-CCC-----HHHHHH----CC-C-CCE--EEEECC----CCCHHHHHHHHHH
Q ss_conf 9226999999964984117889-99880-999-----878110----24-7-518--898289----8899999999999
Q gi|254780497|r 1 MIRSTVRGIGLSLPRRVLSNSD-LESIV-DTS-----DGWIKR----RV-G-ISR--RHIAGK----DETTASLGEAAAR 61 (324)
Q Consensus 1 M~~~~I~~~g~ylP~~~v~~~e-l~~~~-~~~-----~~~i~~----~~-G-I~~--R~~~~~----~e~~~~la~~Aa~ 61 (324)
|.+|.|+|+|..-|--. +.++ |.... +.+ ..|-.. +. | |.. -++... -+...-+++.|++
T Consensus 2 ~~rVviTG~g~vs~lG~-~~~~~~~~l~~g~sgi~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~r~~d~~~~~a~~Aa~ 80 (412)
T COG0304 2 MRRVVITGLGIVSSLGN-GVEEVWAALLAGKSGIRPITRFDASGLGVKIAGEIKDLDDQIAKKERRFMDRFSQLAVVAAV 80 (412)
T ss_pred CCEEEEECCEEECCCCC-CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHCCCHHHHHHHHHHH
T ss_conf 86299943456313658-87999999865878877666456557787503433520101366766141589999999999
Q ss_pred HHHHHHCCCC-CCCC--E-EEEECCCCCC----------------------C----CCC-CCCCHHHHHHCCCCCCCCCC
Q ss_conf 9997402123-5443--3-6650122334----------------------5----898-53100112202686444421
Q gi|254780497|r 62 DALHHAEMSV-DDID--L-IIVATSTPDQ----------------------T----FPS-TAVNIQNRLGMKRGFAFDMQ 110 (324)
Q Consensus 62 ~al~~a~~~~-~~Id--~-ii~~s~~~~~----------------------~----~p~-~a~~i~~~LGl~~~~~~di~ 110 (324)
+|++++|+++ .+.+ . ++.+|..+.. . .|+ .+..++..+|++ ...+.++
T Consensus 81 ~Al~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~g~~-G~~~t~~ 159 (412)
T COG0304 81 EALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGLK-GPNYTPV 159 (412)
T ss_pred HHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCC-CCCCCHH
T ss_conf 999975998433568627999931677841256678888752786676820566653514789999985877-8767806
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCEEEEECC-CC---------------C------CCCCCCC-CCCCCCCCCCCEEEE
Q ss_conf 01220034678889989641556531676302-24---------------3------2224566-323234544312344
Q gi|254780497|r 111 AVCSGFVYAVTTADSYIRSGVVRRVMVIGSDT-FS---------------R------IVDWSDR-STCVLFGDGAGALIL 167 (324)
Q Consensus 111 ~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~-~S---------------~------~~d~~d~-~~~~lfGDGAaA~ll 167 (324)
.+|+++.+++..|..+|+.|..+.+++.++|. .+ + ..++.|+ ...+++|.||+.+||
T Consensus 160 tACatg~~aIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~a~~Alst~nd~p~~asrPfd~~RdGFV~gEGag~lVL 239 (412)
T COG0304 160 TACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNRDGFVIGEGAGALVL 239 (412)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEE
T ss_conf 66776888999999999739999899846533158989999998787567889953358888888997788540457886
Q ss_pred ECCCCCCCCCCC--CCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 026544654344--541012320355555617754876544433200103202444557777777888898740010001
Q gi|254780497|r 168 EGVEVKGSSMAD--TGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENI 245 (324)
Q Consensus 168 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~di 245 (324)
|..+........ ..+...-..+|. ..+.. +. .+| ....+.++.+|+++|++++||
T Consensus 240 E~~ehA~aRGA~Iyaei~G~g~~~Da-----~h~t~-----P~-----p~g--------~Ga~~am~~AL~~Agl~~~~i 296 (412)
T COG0304 240 EELEHALARGAKIYAEIVGYGTTSDA-----YHITA-----PA-----PDG--------EGAIRAMRAALADAGLTPEDI 296 (412)
T ss_pred CCHHHHHHCCCCEEEEEEEEEECCCC-----CCCCC-----CC-----CCC--------CHHHHHHHHHHHHCCCCHHHC
T ss_conf 37624866899658999877731440-----13678-----99-----787--------569999999999849997679
Q ss_pred CCCCCCCCCHH
Q ss_conf 21024444415
Q gi|254780497|r 246 DWFVPHQANWR 256 (324)
Q Consensus 246 d~~~~Hq~~~~ 256 (324)
||+..|-.+-.
T Consensus 297 dYinaHgTsT~ 307 (412)
T COG0304 297 DYINAHGTSTP 307 (412)
T ss_pred CEEECCCCCCC
T ss_conf 98947876687
No 109
>pfam00109 ketoacyl-synt Beta-ketoacyl synthase, N-terminal domain. The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains most of the structures involved in dimer formation and also the active site cysteine.
Probab=99.08 E-value=9.2e-10 Score=82.06 Aligned_cols=167 Identities=22% Similarity=0.325 Sum_probs=104.3
Q ss_pred EEEEEEEEEECCCCEECHHHHHHHH--CCC------HHH--HH--HCCCCCEE-EEECCC------------CCHHHHHH
Q ss_conf 2699999996498411788999880--999------878--11--02475188-982898------------89999999
Q gi|254780497|r 3 RSTVRGIGLSLPRRVLSNSDLESIV--DTS------DGW--IK--RRVGISRR-HIAGKD------------ETTASLGE 57 (324)
Q Consensus 3 ~~~I~~~g~ylP~~~v~~~el~~~~--~~~------~~~--i~--~~~GI~~R-~~~~~~------------e~~~~la~ 57 (324)
+|.|+|+|.-.|.-. +.|++-+.+ +.+ ..+ .. .+.+-+-. +..++. ....-+++
T Consensus 3 ~VvITG~G~vtp~G~-~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 81 (243)
T pfam00109 3 PVAITGMGCRFPGGV-GPEEFWELLLAGRDAIREFPADLSGLYPPSRVAGEIYGFDFDAAFFGISPREAEAMDPQQRLAL 81 (243)
T ss_pred CEEEECCEEECCCCC-CHHHHHHHHHCCCCEEEECCCHHHHCCCCCCCCEECCCCCCCHHHCCCCHHHHHHCCHHHHHHH
T ss_conf 999986688997989-9999999998599888746950644479876010146778781115989999985499999999
Q ss_pred HHHHHHHHHHCCCCCCCC-----EEEEECCCCC--------------CC--------CCC-CCCCHHHHHHCCCCCCCCC
Q ss_conf 999999974021235443-----3665012233--------------45--------898-5310011220268644442
Q gi|254780497|r 58 AAARDALHHAEMSVDDID-----LIIVATSTPD--------------QT--------FPS-TAVNIQNRLGMKRGFAFDM 109 (324)
Q Consensus 58 ~Aa~~al~~a~~~~~~Id-----~ii~~s~~~~--------------~~--------~p~-~a~~i~~~LGl~~~~~~di 109 (324)
.|+++||+++|++++++. -|+.++.... .. .|+ .+.+|+..+|++ .+++.+
T Consensus 82 ~aa~~Al~dAGl~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g~~-Gp~~t~ 160 (243)
T pfam00109 82 EAAWEALEDAGLDPASLRGSDRTGVFVGSGSGDYAELQALDSAGGPRRGSPYLTGAWMPSVAAGRISYRLGLR-GPSVTV 160 (243)
T ss_pred HHHHHHHHHCCCCHHHCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCC-CCCCCC
T ss_conf 9999999984998467278872899998647648999976303674334641105645117888998674157-986466
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC-CC----------CC-------CCCCC-CCCCCCCCCCCEEEEECC
Q ss_conf 1012200346788899896415565316763022-43----------22-------24566-323234544312344026
Q gi|254780497|r 110 QAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF-SR----------IV-------DWSDR-STCVLFGDGAGALILEGV 170 (324)
Q Consensus 110 ~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~-S~----------~~-------d~~d~-~~~~lfGDGAaA~ll~~~ 170 (324)
+.+|++++.||..|..+|++|+.+.+|+.++|.. +. .+ .+.|+ ...+++|+||+++||++.
T Consensus 161 ~~ACaSg~~AI~~A~~~I~~G~~d~~i~Gg~~~~~~~~~~~~f~~~~a~~~~~~~~rpfd~~~~G~v~GEGaa~lvLE~~ 240 (243)
T pfam00109 161 DTACSSSLVALHAAVRSIRRGECDLALAGGVEAPLTPGGFAGFSAAGALLSPDGPCKAFDPFADGFVRGEGVGAVLLKEL 240 (243)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEH
T ss_conf 55207899999999975336983879997841556978999999747857979998887899996553614998999767
Q ss_pred C
Q ss_conf 5
Q gi|254780497|r 171 E 171 (324)
Q Consensus 171 ~ 171 (324)
+
T Consensus 241 e 241 (243)
T pfam00109 241 S 241 (243)
T ss_pred H
T ss_conf 6
No 110
>pfam00108 Thiolase_N Thiolase, N-terminal domain. Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase.
Probab=99.06 E-value=3.9e-10 Score=84.48 Aligned_cols=100 Identities=25% Similarity=0.285 Sum_probs=86.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 89889999999999999974021235443366501223345898531001122026-86444421012200346788899
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADS 125 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~ 125 (324)
-.+.++.+|+..+++.+|++++++|++||.||++.+.+....+..+..+.-..|++ .+.++.|+..|.|++.++..|..
T Consensus 21 l~~~~~~~L~~~~~~~~l~r~~~~p~~Id~vi~G~~~~~g~~~n~aR~~~l~aGlp~~vp~~tvnr~C~Sgl~Ai~~Aa~ 100 (264)
T pfam00108 21 LKDLSAVDLGAIAIKAALERAGVKPEDVDEVIMGNVLQAGEGQNPARQAALKAGIPDSVPAVTINKVCGSGLKAVALAAQ 100 (264)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHH
T ss_conf 78898899999999999998599968835688843665677662999999976999888668982320179999999999
Q ss_pred HHHHCCCCCCEEEEECCCCCC
Q ss_conf 896415565316763022432
Q gi|254780497|r 126 YIRSGVVRRVMVIGSDTFSRI 146 (324)
Q Consensus 126 li~~g~~~~~Lvv~~e~~S~~ 146 (324)
.|++|..+.+|+.+.|.+|+.
T Consensus 101 ~I~~G~~dv~iagGvEsmS~~ 121 (264)
T pfam00108 101 AIRAGDADIVVAGGVESMSNA 121 (264)
T ss_pred HHHCCCCCEEEEECCCCCCCC
T ss_conf 983798766787221356545
No 111
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.04 E-value=1.1e-08 Score=75.10 Aligned_cols=232 Identities=23% Similarity=0.319 Sum_probs=145.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 99999999999997402123544336650122334589853100112202686444421012200346788899896415
Q gi|254780497|r 52 TASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGV 131 (324)
Q Consensus 52 ~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~ 131 (324)
...|-.+|++.+|+++++.++|||+++-+--.. +..+ ++..++.|+++ -|-+-++|+.+..+|.+|..++..|-
T Consensus 56 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLln-Q~i~--s~f~ar~l~IP---f~GlyGACST~~Esl~laa~~vdgg~ 129 (336)
T PRK08304 56 ESKLMSDAIQQALQKANLKESDIDYLLAGDLLN-QTIS--ANFVARELGIP---FLGLYGACSTMMESLALASMLIDGGF 129 (336)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHCEEEEECHHHH-HHHH--HHHHHHHCCCC---EEEHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999999999997499977873897222455-4677--66779865998---01025677889999999999982663
Q ss_pred CCCCEEEEECCCC---CCCC----C-CC-CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCC
Q ss_conf 5653167630224---3222----4-56-632323454431234402654465434454101232035555561775487
Q gi|254780497|r 132 VRRVMVIGSDTFS---RIVD----W-SD-RSTCVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGG 202 (324)
Q Consensus 132 ~~~~Lvv~~e~~S---~~~d----~-~d-~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (324)
.+++|..++.-++ |-++ | .+ |.++-..=-||+|+||++...... + ... |-|+-.| .+
T Consensus 130 A~~vla~tSSH~~tAErQFR~P~EyG~Qrp~tAqwTVTGaGa~il~~~~~~p~------I-t~~--TiGkVvD-----~G 195 (336)
T PRK08304 130 ADRVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAVLLSKEGSGPK------I-TYA--TIGKVID-----YG 195 (336)
T ss_pred HHHHHEECCCCCHHHHHHCCCCHHCCCCCCCCCCEEEECEEEEEEECCCCCCE------E-EEE--EEEEEEE-----CC
T ss_conf 64531002334203665515803206779986517887517999813899977------9-898--6788876-----48
Q ss_pred CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC---CCHHHHHHHHHHCCCCHHHHHH-----
Q ss_conf 65444332001032024445577777778888987400100012102444---4415899999971978767336-----
Q gi|254780497|r 203 PSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQ---ANWRIINSIVDKMKIPFDKVIV----- 274 (324)
Q Consensus 203 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq---~~~~~~~~~~~~lgl~~e~~~~----- 274 (324)
-... +.| | ..+.+...+.|.+.+++.|.+++|.|.++.-- .++.+.+.+.++-|++.+..+.
T Consensus 196 i~D~-----~nM-G----aAMAPAA~dTI~~hf~Dtg~~p~dYDlIvTGDLg~vG~~i~~~Ll~e~g~~i~~~~~DCG~~ 265 (336)
T PRK08304 196 IKDP-----LDM-G----AAMAPAAADTIKQHFEDTGRTPEDYDLIVTGDLGAVGREIAKELLKEEGYDISDNYNDCGVM 265 (336)
T ss_pred CCCC-----CCC-H----HHHHHHHHHHHHHHHHHHCCCHHHCCEEEECCHHHHHHHHHHHHHHHCCCCHHHCCCCCCEE
T ss_conf 8884-----303-5----55537899999999998099900234899664588789999999998097855522756768
Q ss_pred HHH----H--HCCC---HHHHHHHH-HHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf 586----5--1933---01269999-99999806889998999999714501
Q gi|254780497|r 275 TVD----I--HGNT---SAASIPLA-LAVAVKEGRVKKGDCLLLEAMGGGFT 316 (324)
Q Consensus 275 ~~~----~--~Gn~---~sas~~~~-L~~~~~~g~l~~Gd~vll~~~G~G~s 316 (324)
.++ + -|-. .||.++.. +-.-+++|++ .+||+++.|+=+|
T Consensus 266 iyd~e~Qdv~aGGSGcgCSAvV~~g~il~~m~~g~~---krvL~vaTGALlS 314 (336)
T PRK08304 266 IYDSEQQDVFAGGSGCACSAVVTYGYLYKELQKGKL---KRVLVVATGALLS 314 (336)
T ss_pred EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC---CEEEEEECCHHCC
T ss_conf 763777765688765444789989998999864873---1799997403138
No 112
>pfam07451 SpoVAD Stage V sporulation protein AD (SpoVAD). This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation.
Probab=99.04 E-value=1.4e-08 Score=74.50 Aligned_cols=232 Identities=21% Similarity=0.285 Sum_probs=145.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 99999999999997402123544336650122334589853100112202686444421012200346788899896415
Q gi|254780497|r 52 TASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGV 131 (324)
Q Consensus 52 ~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~ 131 (324)
...|-.+|++.||+|++++++|||+++-+--. .+..+ ++..++.|+++ -|-+-++|+.+..+|.+|.-++..|-
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLl-nQ~i~--ssf~ar~l~iP---f~GlyGACST~~E~l~laa~~vd~g~ 124 (329)
T pfam07451 51 ESKMLEEAVKLALKKAGLKKDDIDYLLAGDLL-NQIIS--SSFAARTLGIP---FLGLYGACSTMMESLALAAMLVDGGF 124 (329)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHCEEEEECHHH-HHHHH--HHHHHHHCCCC---EEEHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999998749998886489501244-32577--77889863998---12113566778999999999984665
Q ss_pred CCCCEEEEECCCC---CCCC----C-CC-CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCC
Q ss_conf 5653167630224---3222----4-56-632323454431234402654465434454101232035555561775487
Q gi|254780497|r 132 VRRVMVIGSDTFS---RIVD----W-SD-RSTCVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGG 202 (324)
Q Consensus 132 ~~~~Lvv~~e~~S---~~~d----~-~d-~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (324)
.+++|..++.-++ |-++ | .+ |.++-+.=-||+|+||++...... + ... |-|+-.| .+
T Consensus 125 A~~vla~tSSH~~tAErQFR~P~EyG~QrpptAqWTVTGaGa~il~~~~~~p~------I-t~~--TiGkVvD-----~G 190 (329)
T pfam07451 125 ADYVLAATSSHFASAERQFRFPTEYGGQRPPTAQWTVTGAGAVLLGKEGDGPR------I-TSA--TIGKVVD-----YG 190 (329)
T ss_pred HHHEEEEECCCCHHHHHHCCCCHHCCCCCCCCCCEEEECEEEEEEECCCCCCE------E-EEE--EEEEEEE-----CC
T ss_conf 43413431445203665426822116779986637887518999943899877------9-898--7788876-----58
Q ss_pred CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC---CCHHHHHHHHHHCCCCHHHHHH-----
Q ss_conf 65444332001032024445577777778888987400100012102444---4415899999971978767336-----
Q gi|254780497|r 203 PSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQ---ANWRIINSIVDKMKIPFDKVIV----- 274 (324)
Q Consensus 203 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq---~~~~~~~~~~~~lgl~~e~~~~----- 274 (324)
-... +.| | ..+.+...+.|.+.+++.|.+++|.|.++.-- .++.+.+.+.++-|++.++.+.
T Consensus 191 i~Dp-----~nM-G----aAMAPAA~dTI~~hf~D~g~~p~dYDlIvTGDLG~vG~~i~~~Ll~~~g~~i~~~~~DCG~~ 260 (329)
T pfam07451 191 IKDP-----NNM-G----AAMAPAAADTIEQHFQDTGRDPSDYDLIVTGDLGKVGREIAEDLLKEKGYDISENYQDCGLL 260 (329)
T ss_pred CCCC-----CCC-H----HHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCHHHHHHHHHHHHHHHCCCCHHHCCCCCCEE
T ss_conf 8884-----302-5----55647899999999997099922444799664488789999999998198844431766768
Q ss_pred HHH----HH--CCCH---HHHHHHH-HHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf 586----51--9330---1269999-99999806889998999999714501
Q gi|254780497|r 275 TVD----IH--GNTS---AASIPLA-LAVAVKEGRVKKGDCLLLEAMGGGFT 316 (324)
Q Consensus 275 ~~~----~~--Gn~~---sas~~~~-L~~~~~~g~l~~Gd~vll~~~G~G~s 316 (324)
.++ +. |-.| ||.++.. |-.-+++|++ .+||+++.|+=+|
T Consensus 261 Iyd~~~Q~v~aGGSGcgCSAvV~~g~il~~m~~g~~---krvL~VaTGALlS 309 (329)
T pfam07451 261 IYDNEKQDVHAGGSGCGCSAVVLYGYLLKKMKKGEL---KRVLFVATGALLS 309 (329)
T ss_pred EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC---EEEEEEECCHHCC
T ss_conf 664787765578764336899999998999965872---1899997503138
No 113
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases; InterPro: IPR002155 Two different types of thiolase , , are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases ..
Probab=99.03 E-value=5.2e-10 Score=83.63 Aligned_cols=101 Identities=23% Similarity=0.263 Sum_probs=85.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHH-CCCCCCCCEEEEECCCCCCCC-CCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHH
Q ss_conf 898899999999999999740-212354433665012233458-98531001122026-864444210122003467888
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHA-EMSVDDIDLIIVATSTPDQTF-PSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTA 123 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a-~~~~~~Id~ii~~s~~~~~~~-p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A 123 (324)
-++.++.||++.+.+++|+|+ +++|++||-||++++.+.--- ...+..++=.-|++ +.+++.|+..|+|++.|+..|
T Consensus 19 ~~~~~a~dL~~~~i~~ll~r~p~l~~~~iD~vi~G~V~~~g~~g~~~aR~aaL~AGl~~~vpa~tvnr~CaSGl~Av~~a 98 (447)
T TIGR01930 19 LKDLSAEDLGAAVIKELLERNPGLDPELIDDVILGNVLQAGEQGQNIARQAALAAGLPESVPALTVNRQCASGLQAVALA 98 (447)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHH
T ss_conf 57878799999999999985368884672817761000577644148999998706898787344202324279999999
Q ss_pred HHHHHHCCCCCCEEEEECCCCCCC
Q ss_conf 998964155653167630224322
Q gi|254780497|r 124 DSYIRSGVVRRVMVIGSDTFSRIV 147 (324)
Q Consensus 124 ~~li~~g~~~~~Lvv~~e~~S~~~ 147 (324)
...|++|.+.-+|.-+.|.+|+.-
T Consensus 99 a~~I~~G~~d~~~AGGvEsMS~~P 122 (447)
T TIGR01930 99 AQKIRAGEADVVVAGGVESMSRVP 122 (447)
T ss_pred HHHHHCCCCCEEEEECCCCCCCCC
T ss_conf 988534850167860745446675
No 114
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.01 E-value=2.3e-08 Score=73.20 Aligned_cols=265 Identities=21% Similarity=0.171 Sum_probs=142.7
Q ss_pred CEEEEEEEEEECCCCEECHHH-HHHHHCCC------HHHHHHC-C----CCC-EEEEECCC-----CCHHHHHHHHHHHH
Q ss_conf 226999999964984117889-99880999------8781102-4----751-88982898-----89999999999999
Q gi|254780497|r 2 IRSTVRGIGLSLPRRVLSNSD-LESIVDTS------DGWIKRR-V----GIS-RRHIAGKD-----ETTASLGEAAARDA 63 (324)
Q Consensus 2 ~~~~I~~~g~ylP~~~v~~~e-l~~~~~~~------~~~i~~~-~----GI~-~R~~~~~~-----e~~~~la~~Aa~~a 63 (324)
.+|.|+|+|..-|--. +.++ |.....-. .+..... . .+. ..++..+. ....-|++.|+++|
T Consensus 6 rRVVITGiG~VsplG~-g~~~~w~aL~~G~~~~~~d~~~~~~~~~~~~~~~d~~~~~~~~~~~r~m~~~~~~a~~AA~~A 84 (397)
T PRK06519 6 NDVVITGIGLVSSLGE-GLDAHWAALAAARVQPNVDTETFAPYPVHPLPEIDWDLQIPKRGDQRQMEAWQRLGTYAAGLA 84 (397)
T ss_pred CCEEEECHHHCCCCCC-CHHHHHHHHHCCCCCCCCCHHHCCCCCCEECCCCCHHHCCCCHHHHHCCCHHHHHHHHHHHHH
T ss_conf 9789908044068828-999999998779992542743258754216788883430565155532579999999999999
Q ss_pred HHHHCCCCCC-----CCEEEEECCCC------------------C---C--------CCCC---------CCCCHHHHHH
Q ss_conf 9740212354-----43366501223------------------3---4--------5898---------5310011220
Q gi|254780497|r 64 LHHAEMSVDD-----IDLIIVATSTP------------------D---Q--------TFPS---------TAVNIQNRLG 100 (324)
Q Consensus 64 l~~a~~~~~~-----Id~ii~~s~~~------------------~---~--------~~p~---------~a~~i~~~LG 100 (324)
|+++|+++++ +++++ ++... + + ..|. .+..|.-++|
T Consensus 85 l~dAGl~~~~~~~~~~gv~v-gsg~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~P~~~~~~l~n~~a~~isi~~g 163 (397)
T PRK06519 85 LDDAGIKGNEEICSTMDMIV-AAGGGERDIAVDTAILNEARKGNDRGGLLNERLMTELRPTLFLAQLSNLLAGNISIVHK 163 (397)
T ss_pred HHHCCCCCCCCCCCCCCEEE-EECCCCCCEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 99679998700104656799-95366653044222102444334562033321456678268898877628999999837
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCC----------------CCCC------CCCCCCCCCC
Q ss_conf 26864444210122003467888998964155653167630224----------------3222------4566323234
Q gi|254780497|r 101 MKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFS----------------RIVD------WSDRSTCVLF 158 (324)
Q Consensus 101 l~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S----------------~~~d------~~d~~~~~lf 158 (324)
++ .+++.+.++|+++.+||..|.++|+.|..+.+|+.++|... +..+ +.|| ..+.+
T Consensus 164 ~~-Gp~~tv~tACASg~~AIg~A~~~Ir~G~aDv~iaGGae~~~~p~~~~~~~~~~~~s~~~~~P~~a~~~~dR-~GfVl 241 (397)
T PRK06519 164 VT-GSSRTFMGEEGAGVSAIRIALARIASGQSTHALVGGAYNAERKDMLLLYELGGLLLKDGWAPVWSRKGSAG-GGFIL 241 (397)
T ss_pred CC-CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC-CCEEE
T ss_conf 88-76654026038899999999999977998889986201333728999999733434799992224897567-97354
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 54431234402654465434454101232035555561775487654443320010320244455777777788889874
Q gi|254780497|r 159 GDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDST 238 (324)
Q Consensus 159 GDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~ 238 (324)
|.||+.+|||..+....... .+..... ..+.. ...+ .++ .....++.+|+++
T Consensus 242 GEGAa~LVLE~~ehA~aRGA--~IyaEi~-G~g~~----------~~~~------~~g---------~~~~~~~~al~~a 293 (397)
T PRK06519 242 GSGGAFLVLESREHAEARGA--RPYARLS-GVVSD----------RARR------SPG---------DVEASLERLWSAA 293 (397)
T ss_pred CCCEEEEEECCHHHHHHCCC--EEEEEEE-EEECC----------CCCC------CCC---------HHHHHHHHHHHHC
T ss_conf 16638999735878985899--2689997-64058----------8899------980---------8999999999867
Q ss_pred HCCCCCCCCCCCCCCCHHHHH-----HHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHH---HHHHHCCCCCC
Q ss_conf 001000121024444415899-----99997197876733658651933012699999---99998068899
Q gi|254780497|r 239 HLTIENIDWFVPHQANWRIIN-----SIVDKMKIPFDKVIVTVDIHGNTSAASIPLAL---AVAVKEGRVKK 302 (324)
Q Consensus 239 gl~~~did~~~~Hq~~~~~~~-----~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L---~~~~~~g~l~~ 302 (324)
++.++++.+ +.|..+..-.+ .+.+..++| +-.+=.-+||+-.|+=-+.+ ..++++|.+.|
T Consensus 294 g~~~~~~~~-~~~~tgt~~~d~~e~~al~~~~~~p---VSStKsm~GH~lGAAGAiEav~~~Lal~~g~iPP 361 (397)
T PRK06519 294 GGLAAPTAV-ISGATGAHPATAEERAALEAHPGAP---VRGTGTLFGHLMEAQFPLGLALAALSVSRGALFP 361 (397)
T ss_pred CCCCCCEEE-ECCCCCCCCCHHHHHHHHHHCCCCC---EECCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999757489-8489888842799999986467996---7554476510078999999999999983197189
No 115
>PRK12404 stage V sporulation protein AD; Provisional
Probab=98.96 E-value=3.2e-08 Score=72.20 Aligned_cols=232 Identities=19% Similarity=0.237 Sum_probs=143.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 99999999999997402123544336650122334589853100112202686444421012200346788899896415
Q gi|254780497|r 52 TASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGV 131 (324)
Q Consensus 52 ~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~ 131 (324)
...|-.+|++.||+|+++.++|||+++-+--.. +..+ ++..++.|+++ -|-+-++|+.+..+|.+|.-++..|-
T Consensus 54 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLln-Q~i~--ssf~ar~l~iP---f~GlyGACST~~E~L~laa~~vd~g~ 127 (334)
T PRK12404 54 HKKLFEEACSRATEKAKLRKDDIQFVLAGDLIN-QITP--TSFAARTLGTP---YLGLFGACSTSMEGLALGASIVNAKG 127 (334)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHCEEEEECHHHH-HHHH--HHHHHHHCCCC---EEEHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999999999987499978864896122443-2578--77889864998---01113566778999999999984665
Q ss_pred CCCCEEEEECCCC---CCCC----C-CC-CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCC
Q ss_conf 5653167630224---3222----4-56-632323454431234402654465434454101232035555561775487
Q gi|254780497|r 132 VRRVMVIGSDTFS---RIVD----W-SD-RSTCVLFGDGAGALILEGVEVKGSSMADTGILSTYLCSDGSYIDKLYVDGG 202 (324)
Q Consensus 132 ~~~~Lvv~~e~~S---~~~d----~-~d-~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (324)
.+++|..++.-++ |-++ | .+ |.++-+.=-||+|+||++...... + ... |-|+-.| .+
T Consensus 128 A~~vla~tSSH~~tAErQFR~P~EyG~QrpptAqWTVTGaGa~il~~~~~~p~------I-t~~--TiGkVvD-----~G 193 (334)
T PRK12404 128 AKYLLTGASSHNTAVEKQFRYPTEYGGQKPPTAQWTVTGAGAAILSKTGHGPR------V-TSA--TIGRVVD-----MG 193 (334)
T ss_pred HHHEEEEECCCCHHHHHHCCCCHHCCCCCCCCCCEEEECEEEEEEECCCCCCE------E-EEE--EEEEEEE-----CC
T ss_conf 43502320445203665425822116779986627887618999943899977------9-898--7788876-----58
Q ss_pred CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC---CCHHHHHHHHHHCCCC--HHHHHH---
Q ss_conf 65444332001032024445577777778888987400100012102444---4415899999971978--767336---
Q gi|254780497|r 203 PSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQ---ANWRIINSIVDKMKIP--FDKVIV--- 274 (324)
Q Consensus 203 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq---~~~~~~~~~~~~lgl~--~e~~~~--- 274 (324)
-... +.| | ....+...+.|.+.+++.|.+|+|.|.++.-- .++.+.+.+.++-|++ .++..+
T Consensus 194 i~D~-----~nM-G----aAMAPAA~dTI~~hf~D~g~~p~dYDlI~TGDLG~vG~~i~~~Ll~~~g~~i~~~~~~DCG~ 263 (334)
T PRK12404 194 LTDP-----FNM-G----GAMAPAAVDTIEAHLRDRQIDASYYDLIVTGDLGHVGREIAYDLLHKHGTKVTSEQFQDCGL 263 (334)
T ss_pred CCCC-----CCC-H----HHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
T ss_conf 8884-----302-5----55547899999999997099923445799664388789999999998198887455376674
Q ss_pred -HHHH-----HCCCH---HHHHHHH-HHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf -5865-----19330---1269999-99999806889998999999714501
Q gi|254780497|r 275 -TVDI-----HGNTS---AASIPLA-LAVAVKEGRVKKGDCLLLEAMGGGFT 316 (324)
Q Consensus 275 -~~~~-----~Gn~~---sas~~~~-L~~~~~~g~l~~Gd~vll~~~G~G~s 316 (324)
.+++ -|-.| ||.++.. +-.-+++|++ .+||+++.|+=+|
T Consensus 264 ~Iy~~~Q~v~aGGSGcgCSA~V~~g~il~~m~~g~~---krvL~VaTGALlS 312 (334)
T PRK12404 264 LIYREGQPVIAGASGPGCSATVVYGHLLNRMKRGEL---KKILVVATGALLS 312 (334)
T ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC---EEEEEEECCHHCC
T ss_conf 634689875688765336899999999999964873---0899997503138
No 116
>KOG1394 consensus
Probab=98.93 E-value=9.4e-09 Score=75.61 Aligned_cols=232 Identities=25% Similarity=0.321 Sum_probs=136.7
Q ss_pred CCEEEEEEEEEECCCCEECHHHHHHHHCCCHH----------HHHHC-CC-CCE----EEEECCCC----CHHHHHHHHH
Q ss_conf 92269999999649841178899988099987----------81102-47-518----89828988----9999999999
Q gi|254780497|r 1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDG----------WIKRR-VG-ISR----RHIAGKDE----TTASLGEAAA 60 (324)
Q Consensus 1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~----------~i~~~-~G-I~~----R~~~~~~e----~~~~la~~Aa 60 (324)
|.+|.|+|+|...|--.=...-|...+.-..+ .|..+ -| |.+ -+|...++ +..-+++.|+
T Consensus 23 ~rRVVITGmG~VTplG~~v~~~w~~Ll~GesGI~~l~~~d~k~~p~~v~g~Ip~f~~e~~~s~~~~r~ms~~~~~al~aa 102 (440)
T KOG1394 23 MRRVVITGMGAVTPLGNGVHTSWRNLLSGESGISSLEGPDYKSIPFTVAGKIPRFSVEDYVSKGDERRMSKFTKLALTAA 102 (440)
T ss_pred CEEEEEECCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 30599955634202777757789876536667421466420247620113056633114436244666557899999999
Q ss_pred HHHHHHHCCCCC---CCCE----EEEECCCC---------------------CCCCC----C-CCCCHHHHHHCCCCCCC
Q ss_conf 999974021235---4433----66501223---------------------34589----8-53100112202686444
Q gi|254780497|r 61 RDALHHAEMSVD---DIDL----IIVATSTP---------------------DQTFP----S-TAVNIQNRLGMKRGFAF 107 (324)
Q Consensus 61 ~~al~~a~~~~~---~Id~----ii~~s~~~---------------------~~~~p----~-~a~~i~~~LGl~~~~~~ 107 (324)
++||+++++.+. +.|. |..++.-. +|..| + .+.+|.-++|+. .+..
T Consensus 103 ~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~~gl~-Gpnh 181 (440)
T KOG1394 103 EEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMKYGLR-GPNH 181 (440)
T ss_pred HHHHHHCCCCCCCCCHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHCCC-CCCH
T ss_conf 999973688886412455441045851463329999999999987223433863000665036510334531576-7761
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC---------------CC-CCC------CCCC-CCCCCCCCCCCE
Q ss_conf 421012200346788899896415565316763022---------------43-222------4566-323234544312
Q gi|254780497|r 108 DMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF---------------SR-IVD------WSDR-STCVLFGDGAGA 164 (324)
Q Consensus 108 di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~---------------S~-~~d------~~d~-~~~~lfGDGAaA 164 (324)
.++.+|+.+..++.-|..+|+.|..+..|.-++|.+ |. .-| +.|. ...+.+|.||+.
T Consensus 182 svSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~RdGFVmGEGagv 261 (440)
T KOG1394 182 SVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKKRDGFVMGEGAGV 261 (440)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCEEE
T ss_conf 66766651430588888788707654552267530005222343788777641589931037888667773565066058
Q ss_pred EEEECCCCCCCCCC--CCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 34402654465434--4541012320355555617754876544433200103202444557777777888898740010
Q gi|254780497|r 165 LILEGVEVKGSSMA--DTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTI 242 (324)
Q Consensus 165 ~ll~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~ 242 (324)
+++|.-|....... ..++++.-+.+| ...+ +.+ ..|| ......++++|+++|++|
T Consensus 262 lvlEelEHA~~RgA~I~AE~lGygls~D-----a~Hi-----T~P-----~~dG--------~Ga~~am~raL~~Agl~p 318 (440)
T KOG1394 262 LVLEELEHAKKRGAPIYAEVLGYGLSSD-----AYHI-----TSP-----DPDG--------AGAVLAMERALKDAGLSP 318 (440)
T ss_pred EEHHHHHHHHHCCCCEEHHHHCCCCCCC-----CCCC-----CCC-----CCCC--------CHHHHHHHHHHHHCCCCH
T ss_conf 7618678898749915277645752566-----3434-----789-----9873--------058999999998749995
Q ss_pred CCCCCCCCCCCCHH
Q ss_conf 00121024444415
Q gi|254780497|r 243 ENIDWFVPHQANWR 256 (324)
Q Consensus 243 ~did~~~~Hq~~~~ 256 (324)
+||||+--|..+-.
T Consensus 319 e~i~YvNAHATST~ 332 (440)
T KOG1394 319 EDIDYVNAHATSTP 332 (440)
T ss_pred HHCCEEECCCCCCC
T ss_conf 65570530333576
No 117
>KOG1390 consensus
Probab=98.80 E-value=3.1e-07 Score=65.98 Aligned_cols=269 Identities=22% Similarity=0.234 Sum_probs=147.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 98899999999999999740212354433665012233458985310011220268-64444210122003467888998
Q gi|254780497|r 48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTADSY 126 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~~l 126 (324)
...+..+|+.-|++.+|+|+.++|+|++-+|++...+-.+--..+.+.+=--|++. ..|..++-.|+|++-++.+|..-
T Consensus 26 ssl~A~~Lgsvaikaalera~~~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvNkvCaSgmKAv~laaQs 105 (396)
T KOG1390 26 SSLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVNKVCASGMKAVILAAQS 105 (396)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHH
T ss_conf 45762567789999999853798788455541030126667666777776269985214676236666568999999889
Q ss_pred HHHCCCCCCEEEEECCCCCCCC-CCCCCCC---------CCCCCC-----------CCEEEE------ECCCCCC-----
Q ss_conf 9641556531676302243222-4566323---------234544-----------312344------0265446-----
Q gi|254780497|r 127 IRSGVVRRVMVIGSDTFSRIVD-WSDRSTC---------VLFGDG-----------AGALIL------EGVEVKG----- 174 (324)
Q Consensus 127 i~~g~~~~~Lvv~~e~~S~~~d-~~d~~~~---------~lfGDG-----------AaA~ll------~~~~~~~----- 174 (324)
|+.|....++..+.|.+|..-- +..|... .+.-|| -+|=.. .|.++..
T Consensus 106 I~~G~~divVaGGmEsMS~vP~~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~~~~MG~~aE~~ak~~~ItRe~QD~yAI~S 185 (396)
T KOG1390 106 IQTGHADIVVAGGMESMSNVPYLYVARGGVKYGGVQLVDGIVKDGLTDAYDKCHMGICAENTAKKYQITREEQDAYAIES 185 (396)
T ss_pred HHCCCCCEEEECCCCHHCCCCCHHHHCCCCCCCCEEEEECHHHCCHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 83387657986250200138523133157675880444301223467776067753058664777477676525688886
Q ss_pred ---------CCCCCCCCEEEEEEC---------CC------------CCCCCEEECCCCCCCCCC--------CCHHHCC
Q ss_conf ---------543445410123203---------55------------555617754876544433--------2001032
Q gi|254780497|r 175 ---------SSMADTGILSTYLCS---------DG------------SYIDKLYVDGGPSTSRTV--------GCIRMEG 216 (324)
Q Consensus 175 ---------~~~~~~~~~~~~~~~---------~~------------~~~~~~~~~~~~~~~~~~--------~~~~~~g 216 (324)
.....+++......+ |. .....+..+++..+.... ..+-|.+
T Consensus 186 y~r~~~Aq~~g~f~~EIVPV~V~~~rg~~~v~~DEe~~k~~~~~~~~~l~~vF~~~ggTVTaaNAS~lnDGAAAvvL~s~ 265 (396)
T KOG1390 186 YKRSENAQKAGKFDKEIVPVEVKTKRGETVVKKDEEPKKGSNIEKLSKLRPVFKEDGGTVTAANASTLNDGAAAVVLMSG 265 (396)
T ss_pred HHHHHHHHHCCCCCCCEEEEEEECCCCCEEECCCHHHHCCCCHHHHCCCCCEEECCCCEECCCCCCCCCCCCEEEEEECH
T ss_conf 78778888607788724668983277757863440120132255530045336427975624534665766003677136
Q ss_pred H-----------------------HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHH
Q ss_conf 0-----------------------24445577777778888987400100012102444441589999997197876733
Q gi|254780497|r 217 K-----------------------AVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVI 273 (324)
Q Consensus 217 ~-----------------------~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~ 273 (324)
. ..|.-+ =...+..+|+++||+.+|||+|=++.+---..-...+.|+++|+++.
T Consensus 266 e~~~~~glkPLArIv~~~dAa~~P~df~ia---P~laipk~lk~aG~~~sdVd~~EiNEAFs~v~lA~iK~LgldP~kVN 342 (396)
T KOG1390 266 EAAKELGLKPLARIVAWGDAATEPIDFTIA---PALAIPKALKKAGLEQSDVDYWEINEAFSVVVLANIKKLGLDPSKVN 342 (396)
T ss_pred HHHHHCCCCHHHHHHHHHHHCCCHHHCCCC---HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC
T ss_conf 458676982678775035412481430456---57777899987285666525876644666777777887378876636
Q ss_pred HHH--HHHCC---CHHHHHHHHHHHHHHCCCCCCCCEEE-EEEECCCCCEEEEEEE
Q ss_conf 658--65193---30126999999999806889998999-9997145014568786
Q gi|254780497|r 274 VTV--DIHGN---TSAASIPLALAVAVKEGRVKKGDCLL-LEAMGGGFTSGTVLLR 323 (324)
Q Consensus 274 ~~~--~~~Gn---~~sas~~~~L~~~~~~g~l~~Gd~vl-l~~~G~G~s~~a~llr 323 (324)
.+- --+|| ++.+.++..|.+.++. +.|++.+ -+.-|.|-.. +++++
T Consensus 343 v~GGAValGHPlG~SGaRi~~tL~~~L~~---~~g~~GvAaiCnGGGgas-a~vie 394 (396)
T KOG1390 343 VHGGAVALGHPLGMSGARILVTLLHTLEQ---KGGKIGVAAICNGGGGAS-AMVIE 394 (396)
T ss_pred CCCCEEECCCCCCCCCHHHHHHHHHHHHH---HCCCEEEEEEECCCCCEE-EEEEE
T ss_conf 77854533787677505399999999986---078503798851898500-48886
No 118
>KOG1389 consensus
Probab=98.80 E-value=1.3e-07 Score=68.32 Aligned_cols=272 Identities=19% Similarity=0.244 Sum_probs=148.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHH-HCCCCCC-CCCCCCCCCHHHHHHHHH
Q ss_conf 89889999999999999974021235443366501223345898531001122-0268644-442101220034678889
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRL-GMKRGFA-FDMQAVCSGFVYAVTTAD 124 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~L-Gl~~~~~-~di~~~C~~~~~al~~A~ 124 (324)
.++..+-+|-..+.+..+++.+++|++|+-|+++++.....- ...++++..+ |++-... .-++-.|+|++++.....
T Consensus 56 fkdt~pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~g-a~e~R~a~~~ag~P~tvpv~tvNRqCsSGLqaVadiA 134 (435)
T KOG1389 56 FKDTRPDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSG-ASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADIA 134 (435)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHHCCEEEEECCCCCCC-HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 555882899999999997651899789501355210377753-6898899997189865602566434214778999999
Q ss_pred HHHHHCCCCCCEEEEECCCCCCC--CC-----------CCCCCCCC-CC---CC-CCEEEEECCCCCC------------
Q ss_conf 98964155653167630224322--24-----------56632323-45---44-3123440265446------------
Q gi|254780497|r 125 SYIRSGVVRRVMVIGSDTFSRIV--DW-----------SDRSTCVL-FG---DG-AGALILEGVEVKG------------ 174 (324)
Q Consensus 125 ~li~~g~~~~~Lvv~~e~~S~~~--d~-----------~d~~~~~l-fG---DG-AaA~ll~~~~~~~------------ 174 (324)
.-|++|.+.-.|-.+.|.++... .| .+...+++ +| .- |.-.=++++++..
T Consensus 135 ~~Ir~G~ydIGla~GvESMt~~~~~g~~g~~~~~~~~~~~A~dCllpmGitsEnva~rfgvsR~eqD~~Av~S~kkAa~A 214 (435)
T KOG1389 135 AKIRAGFYDIGLAAGVESMTTNYPRGWPGSINPRLQKFEKARDCLLPMGITSENVAERFGVSREEQDEAAVDSHKKAAAA 214 (435)
T ss_pred HHHHCCCEEEECCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 88744836630013511210367888866658424331577614432253157789872977656468888878999987
Q ss_pred --CCCCCCCCEEE--EEECCCCCCC---CEEECCCCCCC-------CCCCCHHHCCHHH---------------------
Q ss_conf --54344541012--3203555556---17754876544-------4332001032024---------------------
Q gi|254780497|r 175 --SSMADTGILST--YLCSDGSYID---KLYVDGGPSTS-------RTVGCIRMEGKAV--------------------- 219 (324)
Q Consensus 175 --~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~-------~~~~~~~~~g~~~--------------------- 219 (324)
......+++.. .+ .|++..+ .+..+.+.... .....|++||-..
T Consensus 215 ~~~G~f~dEIiPv~tkv-~D~~g~~k~i~v~~DeGiRp~ttl~~l~klkpvFkkdGttTagNsSQvSDGa~aVLLmkRs~ 293 (435)
T KOG1389 215 TAKGKFKDEIIPVKTKV-VDPKGDEKPITVSVDEGIRPNTTLESLAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSV 293 (435)
T ss_pred HHCCCCHHHEEEEEEEC-CCCCCCCCCEEEECCCCCCCCCCHHHHHHCCHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHH
T ss_conf 64486323321100121-58867756626734788787765667763431422178203576311255535644436656
Q ss_pred -----------H-HHHHHHH---------HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH---
Q ss_conf -----------4-4557777---------777888898740010001210244444158999999719787673365---
Q gi|254780497|r 220 -----------F-KYAVEKA---------VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--- 275 (324)
Q Consensus 220 -----------~-~~~~~~~---------~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--- 275 (324)
| .|....+ .-.|..+|+.+||..+|||+|=++.+-.+-.-...++|+|++||+..+
T Consensus 294 A~qlgLPvlgvfr~f~~vGv~P~iMGiGPavAIp~alk~aGL~v~did~FEINEAFAsQ~~yc~~KL~ld~ekVN~~GGa 373 (435)
T KOG1389 294 AMQLGLPVLGVFRDFAAVGVPPAIMGIGPAVAIPKALKAAGLEVDDIDLFEINEAFASQALYCRNKLGLDPEKVNVNGGA 373 (435)
T ss_pred HHHCCCCEEEEEEEEEEECCCHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCHHHCCCCCCE
T ss_conf 76549954677653244068889838772434288998749852235413233888888999998738988884888862
Q ss_pred ---HHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEE
Q ss_conf ---8651933012699999999980688999899999971450145687
Q gi|254780497|r 276 ---VDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFTSGTVL 321 (324)
Q Consensus 276 ---~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~a~l 321 (324)
-+-+|-+|+--+.--|+++-+++.-.... |+-+..|.|+-..++.
T Consensus 374 iAlGHPlGatGAR~VaTlL~emKrrgkd~~~G-VvSmCIGtGmGaAAvF 421 (435)
T KOG1389 374 IALGHPLGATGARCVATLLHEMKRRGKDCRFG-VVSMCIGTGMGAAAVF 421 (435)
T ss_pred EECCCCCCCCCHHHHHHHHHHHHHHCCCCCCC-EEEEEECCCCCHHEEE
T ss_conf 33068757741759999999998633255555-6888524785322025
No 119
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=98.76 E-value=1e-06 Score=62.70 Aligned_cols=96 Identities=22% Similarity=0.173 Sum_probs=72.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCC-CCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 98899999999999999740212-35443366501223345898531001122026864444210122003467888998
Q gi|254780497|r 48 KDETTASLGEAAARDALHHAEMS-VDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSY 126 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a~~~-~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~l 126 (324)
+..++.+|..+|++.|++++|.+ .+.||.|.+.-...+ .++.....|+++||+.+...+--..|=.+--.-+..++.-
T Consensus 25 ~~~ePl~Lm~~A~~~A~~DaG~~l~~~IDsI~VVr~~sw-~y~np~~~lA~rLG~~pa~~~~t~~GGn~PQ~LVneaa~r 103 (502)
T PRK08257 25 RGLEPVDLMAAAARAAAADAGADLLEAIDSVAVVNQLSW-RYRNPPGLLAERLGADPARTVYGPVGGNSPQRLVNEAALR 103 (502)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHHCCEEEEECCCCC-CCCCHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHH
T ss_conf 147999999999999998608205875978985132256-4799899999973999775798369983689999999999
Q ss_pred HHHCCCCCCEEEEECCCC
Q ss_conf 964155653167630224
Q gi|254780497|r 127 IRSGVVRRVMVIGSDTFS 144 (324)
Q Consensus 127 i~~g~~~~~Lvv~~e~~S 144 (324)
|+.|+.+-+||+++|..+
T Consensus 104 Ia~Ge~~~aLI~GgEA~~ 121 (502)
T PRK08257 104 IARGEADVVLVAGAEAQS 121 (502)
T ss_pred HHCCCCCEEEEECHHHHH
T ss_conf 976885479997440699
No 120
>KOG1202 consensus
Probab=98.70 E-value=4.5e-07 Score=64.93 Aligned_cols=295 Identities=20% Similarity=0.266 Sum_probs=158.7
Q ss_pred CEEEEEEEEEECCCCEECHHHHHHHH--C------CCHHHHHHCCCCCEEEEE---------------CC----CCCHHH
Q ss_conf 22699999996498411788999880--9------998781102475188982---------------89----889999
Q gi|254780497|r 2 IRSTVRGIGLSLPRRVLSNSDLESIV--D------TSDGWIKRRVGISRRHIA---------------GK----DETTAS 54 (324)
Q Consensus 2 ~~~~I~~~g~ylP~~~v~~~el~~~~--~------~~~~~i~~~~GI~~R~~~---------------~~----~e~~~~ 54 (324)
-.+.|.|+.--+|+.- ..+||-.-+ | -+--|-.-..|.-+|+=- .+ =....-
T Consensus 11 ~divIsG~SGklPes~-ni~eF~~nLl~GvDmVtdd~rRW~~GlygLP~R~gKlKdL~kFDa~FF~Vh~KQA~~MDP~lR 89 (2376)
T KOG1202 11 EDIVISGMSGKLPESD-NVKEFGDNLLAGVDMVTDDPRRWEAGLYGLPKRSGKLKDLNKFDAGFFGVHPKQANTMDPQLR 89 (2376)
T ss_pred CCEEEECCCCCCCCCC-CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHCCCCHHHHHCCCHHHH
T ss_conf 7689853567799864-189998764234312547743444532588244312334656311221277634310398999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCE-----EEEECC--CCCCC--CC---------CC-CCCHHHHHHCC---CCCCCCCCCC
Q ss_conf 9999999999740212354433-----665012--23345--89---------85-31001122026---8644442101
Q gi|254780497|r 55 LGEAAARDALHHAEMSVDDIDL-----IIVATS--TPDQT--FP---------ST-AVNIQNRLGMK---RGFAFDMQAV 112 (324)
Q Consensus 55 la~~Aa~~al~~a~~~~~~Id~-----ii~~s~--~~~~~--~p---------~~-a~~i~~~LGl~---~~~~~di~~~ 112 (324)
|-.++--+|+-++|++|.|+.- -|-+|. |...+ .| ++ -+|.++++-.+ +.+.|.+..+
T Consensus 90 lLLE~t~EAivDaGiNP~dLRGsrTGV~vG~S~sETs~~l~~d~dtv~GY~ltGC~RaMfaNRiSytFDf~GPSfsvDTA 169 (2376)
T KOG1202 90 LLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGPSFSVDTA 169 (2376)
T ss_pred HHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCEEEEEECCCCCEEEECH
T ss_conf 99998899998368886663764431799735543443224798600331014778998633405899536883455124
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEECCCC-C-----CCC---CCCCCCCCC---------CCCCCCEEEEECCCCCC
Q ss_conf 22003467888998964155653167630224-3-----222---456632323---------45443123440265446
Q gi|254780497|r 113 CSGFVYAVTTADSYIRSGVVRRVMVIGSDTFS-R-----IVD---WSDRSTCVL---------FGDGAGALILEGVEVKG 174 (324)
Q Consensus 113 C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S-~-----~~d---~~d~~~~~l---------fGDGAaA~ll~~~~~~~ 174 (324)
|+|.+.||+.|.+-|.+|++.+++|-++...- + +.+ .++..++-. =.||++|++|.+.....
T Consensus 170 CSSSL~ALq~A~~~ir~Gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avllqrk~~Ar 249 (2376)
T KOG1202 170 CSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVLLQRKSLAR 249 (2376)
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEECCCHHHHHHHHCCCCCCCCCCCHHCCCCCEEECCCEEEEEEEHHHHHH
T ss_conf 56889999999999864688466410562575441456778743758898610010037823512756999874457787
Q ss_pred CCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 54344541012320355555617754876544433200103202444557777777888898740010001210244444
Q gi|254780497|r 175 SSMADTGILSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQAN 254 (324)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~ 254 (324)
+. ...+++..+.+||-...-+..| .| +.-.++++++.+++|+.|+++-++=-|-.+
T Consensus 250 Rv--YAtilnartNTDGfKEqGvTfP--------------~G--------~~Q~qLi~e~Yse~Gl~P~sv~YvEAHGtG 305 (2376)
T KOG1202 250 RV--YATILNARTNTDGFKEQGVTFP--------------SG--------DMQEQLIRETYSEAGLNPESVVYVEAHGTG 305 (2376)
T ss_pred HH--HHHHHCCCCCCCCHHHCCCCCC--------------CC--------HHHHHHHHHHHHHCCCCCCCEEEEEECCCC
T ss_conf 88--8875204557874221386578--------------80--------799999999998619892327999721677
Q ss_pred HH---------HHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH---HC---------------------CCCC
Q ss_conf 15---------899999971978767336586519330126999999999---80---------------------6889
Q gi|254780497|r 255 WR---------IINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAV---KE---------------------GRVK 301 (324)
Q Consensus 255 ~~---------~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~---~~---------------------g~l~ 301 (324)
.+ +.+.++..-. .+=.+-++-.+.||.-+||=..+|+..+ +. |+++
T Consensus 306 TkVGDpQEaN~it~~fC~~Rt-~pLLIGSvKSNMGHaEPASGv~alaKillsmE~glip~NLHy~tPNp~ip~L~dGrLk 384 (2376)
T KOG1202 306 TKVGDPQEANGITRFFCATRT-TPLLIGSVKSNMGHAEPASGVCALAKILLSMEEGLIPPNLHYNTPNPEIPALVDGRLK 384 (2376)
T ss_pred CCCCCHHHHHHHHHHHHHCCC-CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCEEE
T ss_conf 877996787368898851588-7327652024579998640078999999988727578866568999876201056257
Q ss_pred --------CCCEEEEEEECCCCCEEEEEE
Q ss_conf --------998999999714501456878
Q gi|254780497|r 302 --------KGDCLLLEAMGGGFTSGTVLL 322 (324)
Q Consensus 302 --------~Gd~vll~~~G~G~s~~a~ll 322 (324)
+|..|-+-|||=|-+-.-+++
T Consensus 385 VVd~~lp~~GGivGiNSFGFGGsN~HviL 413 (2376)
T KOG1202 385 VVDRPLPWRGGIVGINSFGFGGSNAHVIL 413 (2376)
T ss_pred EECCCCCCCCCEEEEECCCCCCCCEEEEE
T ss_conf 86578875686333413446887405995
No 121
>KOG1406 consensus
Probab=98.68 E-value=9e-09 Score=75.74 Aligned_cols=95 Identities=20% Similarity=0.236 Sum_probs=76.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 98899999999999999740212354433665012233458985310011220268644442101220034678889989
Q gi|254780497|r 48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYI 127 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li 127 (324)
++.+..||+.+|..++|+++++.-++|+.-+.+-..+|.... .+-.-++|++..+.|++++.|+.+.++|-+|..+|
T Consensus 25 ~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgdstcg---qraiyevgmtgipi~nvnnncatgssalflakqii 101 (408)
T KOG1406 25 ADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDSTCG---QRAIYEVGMTGIPIYNVNNNCATGSSALFLAKQII 101 (408)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHEEEECCCCCC---HHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHH
T ss_conf 688670789999998888629977998766412452587530---67888704667624623675356704889999998
Q ss_pred HHCCCCCCEEEEECCCCC
Q ss_conf 641556531676302243
Q gi|254780497|r 128 RSGVVRRVMVIGSDTFSR 145 (324)
Q Consensus 128 ~~g~~~~~Lvv~~e~~S~ 145 (324)
++|...-+|..+-|.+++
T Consensus 102 esgn~dcvlalgfekm~~ 119 (408)
T KOG1406 102 ESGNSDCVLALGFEKMER 119 (408)
T ss_pred HCCCCCEEEEECHHHCCC
T ss_conf 657753587613023077
No 122
>KOG1391 consensus
Probab=98.49 E-value=3.8e-06 Score=59.00 Aligned_cols=96 Identities=20% Similarity=0.337 Sum_probs=79.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-----CCCCCCCCCCCCCHHHHHH
Q ss_conf 89889999999999999974021235443366501223345898531001122026-----8644442101220034678
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-----RGFAFDMQAVCSGFVYAVT 121 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-----~~~~~di~~~C~~~~~al~ 121 (324)
-++.+..||..-|++.+|+.+++.++.+|.||++... ...+.+.++.+..|++ ...++.|+--|-|+.+++-
T Consensus 23 LKg~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~---aSSsDgIYl~RHvGL~~GvP~e~pALtiNRLCGSGFQsiV 99 (396)
T KOG1391 23 LKGLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVL---ASSSDGIYLARHVGLRVGVPKETPALTINRLCGSGFQSIV 99 (396)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEEE---ECCCCCEEEEECCCCCCCCCCCCCCEEEHHHHCCCHHHHH
T ss_conf 1575444678899998886438883233258871134---1257726754003532278676673343013131279898
Q ss_pred HHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf 889989641556531676302243
Q gi|254780497|r 122 TADSYIRSGVVRRVMVIGSDTFSR 145 (324)
Q Consensus 122 ~A~~li~~g~~~~~Lvv~~e~~S~ 145 (324)
.++.-|.-|..+-+|.-+.|.+|.
T Consensus 100 NgaQ~I~vgea~ivL~GGtEnMSq 123 (396)
T KOG1391 100 NGAQEICVGEAEIVLCGGTENMSQ 123 (396)
T ss_pred HHHHHHHCCCCEEEEECCCCCCCC
T ss_conf 667776307615998447452345
No 123
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=98.39 E-value=5.9e-07 Score=64.15 Aligned_cols=99 Identities=21% Similarity=0.220 Sum_probs=77.6
Q ss_pred CCCHHHHHHHHHHHHHHHH--CCCCCCCCEEEEECCCCCC-CCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHH
Q ss_conf 8899999999999999740--2123544336650122334-58985310011220268-644442101220034678889
Q gi|254780497|r 49 DETTASLGEAAARDALHHA--EMSVDDIDLIIVATSTPDQ-TFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTAD 124 (324)
Q Consensus 49 ~e~~~~la~~Aa~~al~~a--~~~~~~Id~ii~~s~~~~~-~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~ 124 (324)
+....++.....+..+++. ++++.+||-+++++..+.. ..+..+..++..+|++. .+++.++.+|+|++.++..|.
T Consensus 24 ~l~~e~l~~a~~~a~~~~~~~~vd~~~v~~vi~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~~~c~SG~~Av~~A~ 103 (392)
T COG0183 24 ELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAA 103 (392)
T ss_pred HCCHHHHHHHHHHHHHHHCCCCCCHHHHHHEEECCCCCHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHH
T ss_conf 62799999999997644222049855410214401341100335388999998599989870899645711999999999
Q ss_pred HHHHHCCCCCCEEEEECCCCCCC
Q ss_conf 98964155653167630224322
Q gi|254780497|r 125 SYIRSGVVRRVMVIGSDTFSRIV 147 (324)
Q Consensus 125 ~li~~g~~~~~Lvv~~e~~S~~~ 147 (324)
..|++|..+.+|+++.|.+|+..
T Consensus 104 ~~I~sG~~dvvlagG~E~mS~~~ 126 (392)
T COG0183 104 QAIASGEADVVLAGGVEKMSDAP 126 (392)
T ss_pred HHHHCCCCCEEEEEEECCCCCCC
T ss_conf 99977998889998561145687
No 124
>pfam08540 HMG_CoA_synt_C Hydroxymethylglutaryl-coenzyme A synthase C terminal.
Probab=98.31 E-value=1.3e-05 Score=55.61 Aligned_cols=110 Identities=15% Similarity=0.275 Sum_probs=67.1
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHHHH---------HHCCCCCCCCCCCCCCCHHHHHHHHHHC------------------
Q ss_conf 1032024445577777778888987---------4001000121024444415899999971------------------
Q gi|254780497|r 213 RMEGKAVFKYAVEKAVELIEKVFDS---------THLTIENIDWFVPHQANWRIINSIVDKM------------------ 265 (324)
Q Consensus 213 ~~~g~~~~~~~~~~~~~~i~~~L~~---------~gl~~~did~~~~Hq~~~~~~~~~~~~l------------------ 265 (324)
..||+..-+.+++.+........++ .+...+++|++++|.|--++.+.-..+|
T Consensus 29 ~VDGk~Si~cYl~ALd~cy~~Y~~K~~~~~~~~~~~~~ld~fd~~~FH~Py~KlvqKs~arl~~nD~~~~~~~~~~~~~~ 108 (282)
T pfam08540 29 VVDGKLSLQCYLKALDSCYKNYCKKIEKQTKDGGTKFGLDDFDYVIFHSPYCKLVQKSLARLLYNDFLRNPSSDKGNGVY 108 (282)
T ss_pred EECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCH
T ss_conf 44728899999999999999999998730023677663766778998575448999999999987653065520110001
Q ss_pred -------CCCHH----------------------HH---HHHHHHHCCCHHHHHHHHHHHHHHCCCC--CCCCEEEEEEE
Q ss_conf -------97876----------------------73---3658651933012699999999980688--99989999997
Q gi|254780497|r 266 -------KIPFD----------------------KV---IVTVDIHGNTSAASIPLALAVAVKEGRV--KKGDCLLLEAM 311 (324)
Q Consensus 266 -------gl~~e----------------------~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~l--~~Gd~vll~~~ 311 (324)
+++.| |+ ...-.++||++++|++++|..++.+... -.|++|.|.||
T Consensus 109 ~~l~~~~~~~~e~s~~dk~~ek~~~~~sk~~f~~kv~psl~~~~~vGNmYTaSlY~~L~SLL~~~~~~~L~GkRIg~FSY 188 (282)
T pfam08540 109 EKLEALGGLKLEDSYTDRDLEKAFMQLSKPLFKKKTKPSLLLPTQVGNMYTASLYAALASLLSHVSADELAGKRIGMFSY 188 (282)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC
T ss_conf 11100014644540100689999998708989863261878878607500699999999998437752348998999851
Q ss_pred CCCCCEEEEEE
Q ss_conf 14501456878
Q gi|254780497|r 312 GGGFTSGTVLL 322 (324)
Q Consensus 312 G~G~s~~a~ll 322 (324)
|+|+..+.--+
T Consensus 189 GSGlaas~FS~ 199 (282)
T pfam08540 189 GSGLAASLFSL 199 (282)
T ss_pred CCCCCEEEEEE
T ss_conf 66611246758
No 125
>KOG1392 consensus
Probab=98.27 E-value=1.6e-06 Score=61.35 Aligned_cols=107 Identities=20% Similarity=0.253 Sum_probs=80.9
Q ss_pred CCCEEEEEC----CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCC
Q ss_conf 751889828----98899999999999999740212354433665012233458985310011220268-6444421012
Q gi|254780497|r 39 GISRRHIAG----KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVC 113 (324)
Q Consensus 39 GI~~R~~~~----~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C 113 (324)
|+++-++.. ++.-+-||+.+|.+.+|++..++.+.||+|||+|...+.-....|..-+-.-|.++ .++-.+..+|
T Consensus 49 gvrtpfl~sgt~ykdlmphdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktpahtvtmac 128 (465)
T KOG1392 49 GVRTPFLVSGTVYKDLMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTPAHTVTMAC 128 (465)
T ss_pred CCCCCEEECCCCHHHHCHHHHHHHHHHHHHHHCCCCHHHHCEEEEHHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEEH
T ss_conf 36575365262055306058899999999875259888833453034577775012888999865898888641565210
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf 20034678889989641556531676302243
Q gi|254780497|r 114 SGFVYAVTTADSYIRSGVVRRVMVIGSDTFSR 145 (324)
Q Consensus 114 ~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~ 145 (324)
.+.-.|+-....+|++|.++.++.-+.|.+|.
T Consensus 129 issn~amttgmgliatg~~dvivaggvelmsd 160 (465)
T KOG1392 129 ISSNVAMTTGMGLIATGNADVIVAGGVELMSD 160 (465)
T ss_pred HCCCHHHHCCCEEEEECCCCEEEECCEEECCC
T ss_conf 10351433062057507767798756554026
No 126
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA; InterPro: IPR004432 Members of this entry represent PfaA, which is involved in omega-3 polyunsaturated fatty acid biosynthesis, for example PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is found together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologues of PfaA, also included in this entry, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis; an alternative to the more familiar iterated mechanism of chain extension and desaturation, and like PfaA the more distant homologues are likewise found near genes for homologues of PfaB, PfaC, and/or PfaD..
Probab=96.63 E-value=0.003 Score=40.51 Aligned_cols=187 Identities=19% Similarity=0.314 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEE------EECCCCCCCCCC-----CCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 999999999974021235443366------501223345898-----531001122026864444210122003467888
Q gi|254780497|r 55 LGEAAARDALHHAEMSVDDIDLII------VATSTPDQTFPS-----TAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTA 123 (324)
Q Consensus 55 la~~Aa~~al~~a~~~~~~Id~ii------~~s~~~~~~~p~-----~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A 123 (324)
|-.=..+|.|+.+|++-+|=.+|| |.+ +-++-.|+ ++++|++++.+...-|. +..+|+|.+.||++|
T Consensus 141 LQyPVL~KV~K~SG~~d~D~~~lI~KF~~~Yi~-WEENSFPG~LGNVIsGRIANRFDlGG~NCV-VDAACAGSLAA~~~A 218 (2773)
T TIGR02813 141 LQYPVLKKVFKASGVEDEDSEMLIKKFQDQYIH-WEENSFPGSLGNVISGRIANRFDLGGMNCV-VDAACAGSLAALRLA 218 (2773)
T ss_pred CCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCHHHCCHHHHHCCCCCCHH-HHHHHHHHHHHHHHH
T ss_conf 033368888741588764689999987621344-414578976433010101100015884256-666436679999999
Q ss_pred HHHHHHCCCCCCEE---EEECC-------CCC--------CCCCCCCCC-CCCCCCCCCEEEEECCCCCCCCCCC--CCC
Q ss_conf 99896415565316---76302-------243--------222456632-3234544312344026544654344--541
Q gi|254780497|r 124 DSYIRSGVVRRVMV---IGSDT-------FSR--------IVDWSDRST-CVLFGDGAGALILEGVEVKGSSMAD--TGI 182 (324)
Q Consensus 124 ~~li~~g~~~~~Lv---v~~e~-------~S~--------~~d~~d~~~-~~lfGDGAaA~ll~~~~~~~~~~~~--~~~ 182 (324)
-+-+-.|+. -++| ||+|+ ||+ -+.+.|.++ .++.|.|-+=+-|-|-+...+..-. .-+
T Consensus 219 ls~L~E~RS-e~MI~GGVC~DNSP~MYMSFSKTPAFTT~E~I~PFD~DSKGMMIGEGIGM~AlKRLeDAERDGD~iYaV~ 297 (2773)
T TIGR02813 219 LSELLEGRS-EMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQPFDIDSKGMMIGEGIGMVALKRLEDAERDGDRIYAVI 297 (2773)
T ss_pred HHHHCCCCC-CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 986302532-1456275324888730202367876567885343314567544316555565332110105887789987
Q ss_pred EEEEEECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 01232035555561775487654443320010320244455777777788889874001000121024444415899999
Q gi|254780497|r 183 LSTYLCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIV 262 (324)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~ 262 (324)
.+.=..+||+|.. +|. -|.+| -.+.++++.+++|..|.-+..+=-|=.+-. -=-++
T Consensus 298 KGvGaSSDGkFKS-IYA------------PRP~G----------QAKAL~RAYdDAGF~P~~~GliEAHGTGT~-AGD~A 353 (2773)
T TIGR02813 298 KGVGASSDGKFKS-IYA------------PRPEG----------QAKALKRAYDDAGFAPHTVGLIEAHGTGTA-AGDVA 353 (2773)
T ss_pred ECCCCCCCCCEEE-EEC------------CCCCH----------HHHHHHHHHHHCCCCCCCEEEEECCCCCCC-CCCCH
T ss_conf 3101376873223-217------------89844----------689987546432799751100621677764-12202
Q ss_pred HHCCCC
Q ss_conf 971978
Q gi|254780497|r 263 DKMKIP 268 (324)
Q Consensus 263 ~~lgl~ 268 (324)
|--||.
T Consensus 354 EF~GL~ 359 (2773)
T TIGR02813 354 EFSGLV 359 (2773)
T ss_pred HHCCCC
T ss_conf 331430
No 127
>pfam00195 Chal_sti_synt_N Chalcone and stilbene synthases, N-terminal domain. The C-terminal domain of Chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in this N-terminal domain.
Probab=96.58 E-value=0.015 Score=36.09 Aligned_cols=88 Identities=14% Similarity=-0.002 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC----CCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 45577777778888987400100012102444----44158999999719787673365865193301269999999998
Q gi|254780497|r 221 KYAVEKAVELIEKVFDSTHLTIENIDWFVPHQ----ANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVK 296 (324)
Q Consensus 221 ~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq----~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~ 296 (324)
+.+++...+..+++|++.|+.++||+++++-. ..+.+--.++++|||+++--...+.-.|.-+... -+..+..+-
T Consensus 100 ~~a~~La~~Aa~~AL~~aG~~~~dIthlv~vt~TG~~~Pg~d~~l~~~LGL~~~v~R~~i~~~GC~gg~~-gL~~A~~~~ 178 (228)
T pfam00195 100 VEVPKLGKEAALKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRVMLYQQGCFAGGT-VLRLAKDLA 178 (228)
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCHHEEEECCCCHHHHH-HHHHHHHHH
T ss_conf 9999999999999999958898899999999479998874789999982989872111411454164899-999999999
Q ss_pred CCCCCCCCEEEEEEE
Q ss_conf 068899989999997
Q gi|254780497|r 297 EGRVKKGDCLLLEAM 311 (324)
Q Consensus 297 ~g~l~~Gd~vll~~~ 311 (324)
+-+|+.+||+++.
T Consensus 179 --~~~p~~~VLvv~~ 191 (228)
T pfam00195 179 --ENNKGARVLVVCS 191 (228)
T ss_pred --HHCCCCEEEEEEE
T ss_conf --8299987999982
No 128
>pfam02803 Thiolase_C Thiolase, C-terminal domain. Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase.
Probab=96.29 E-value=0.021 Score=35.07 Aligned_cols=93 Identities=24% Similarity=0.268 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH--HHHCCCHHH---HHHHHHHHHHHCCCCC
Q ss_conf 77778888987400100012102444441589999997197876733658--651933012---6999999999806889
Q gi|254780497|r 227 AVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTV--DIHGNTSAA---SIPLALAVAVKEGRVK 301 (324)
Q Consensus 227 ~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~--~~~Gn~~sa---s~~~~L~~~~~~g~l~ 301 (324)
-...++++|+++|++++|||+|=+|-+--...-...+.|++++||+...- =-+||=..+ -+...|.+.++. +
T Consensus 24 p~~A~~~lL~r~gl~~~Did~~EinEAFA~~~l~~~~~l~id~ekvN~~GGaiAlGHP~GaSGarlv~~l~~~L~~---~ 100 (123)
T pfam02803 24 PAYAIPKALKKAGLTVNDIDLFEINEAFAAQALAVAKDLGIDPEKVNVNGGAIALGHPLGASGARILVTLLHELKR---R 100 (123)
T ss_pred HHHHHHHHHHHCCCCHHHCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHH---H
T ss_conf 9999999999829985546645641456777899999719892014898873442788466248999999999998---3
Q ss_pred CCCEEEE-EEECCCCCEEEEEEE
Q ss_conf 9989999-997145014568786
Q gi|254780497|r 302 KGDCLLL-EAMGGGFTSGTVLLR 323 (324)
Q Consensus 302 ~Gd~vll-~~~G~G~s~~a~llr 323 (324)
.+.+.+. ...|.|.- .+++++
T Consensus 101 ~~~~G~as~C~gGG~g-~A~llE 122 (123)
T pfam02803 101 GGKYGLATLCIGGGQG-VAMIIE 122 (123)
T ss_pred CCCEEEEEEECCCCEE-EEEEEE
T ss_conf 9999999970355608-899997
No 129
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=96.20 E-value=0.028 Score=34.30 Aligned_cols=11 Identities=0% Similarity=0.063 Sum_probs=4.1
Q ss_pred HHHHHHHCCCC
Q ss_conf 99997402123
Q gi|254780497|r 61 RDALHHAEMSV 71 (324)
Q Consensus 61 ~~al~~a~~~~ 71 (324)
++..+++||+-
T Consensus 42 ~~i~~~tgI~~ 52 (361)
T cd00831 42 KRLCAKTGIET 52 (361)
T ss_pred HHHHHCCCCCE
T ss_conf 99997269861
No 130
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases; InterPro: IPR002155 Two different types of thiolase , , are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases ..
Probab=96.19 E-value=0.0031 Score=40.39 Aligned_cols=79 Identities=25% Similarity=0.279 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCC---------------C--CHHHHHHHHH--HHCC---CHHH
Q ss_conf 777888898740010001210244444158999999719---------------7--8767336586--5193---3012
Q gi|254780497|r 228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMK---------------I--PFDKVIVTVD--IHGN---TSAA 285 (324)
Q Consensus 228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lg---------------l--~~e~~~~~~~--~~Gn---~~sa 285 (324)
...++++|+++||+.+|||+|=+|-+-....-...+.|+ + +.+|+-.+=- =+|| .+.|
T Consensus 331 ~~A~~~aL~kaGL~~~diDl~E~NEAFAaqvL~~~~~L~~~~~~~~~LG~~~a~~~~~~~k~NvnGGAIAlGHPlGasGA 410 (447)
T TIGR01930 331 VPAIPKALKKAGLSISDIDLFEINEAFAAQVLASIKELGLDDYIRQALGRDTALLDIDLEKVNVNGGAIALGHPLGASGA 410 (447)
T ss_pred HHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEECCCCCCCCCCCCCHHHCCCCCCCHHH
T ss_conf 88999999984987335031013678999999999971784688863041110025861241766532111630023188
Q ss_pred HHHHHHHHHHHCCCCCCCCEEE
Q ss_conf 6999999999806889998999
Q gi|254780497|r 286 SIPLALAVAVKEGRVKKGDCLL 307 (324)
Q Consensus 286 s~~~~L~~~~~~g~l~~Gd~vl 307 (324)
=+.+.|-+.|++.+ +.+.+.+
T Consensus 411 Ri~~tL~~~L~~~~-~g~~~G~ 431 (447)
T TIGR01930 411 RIVTTLLHELKRRK-KGKRYGL 431 (447)
T ss_pred HHHHHHHHHHHHCC-CCCCHHH
T ss_conf 99999999998514-8953016
No 131
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=95.50 E-value=0.016 Score=35.85 Aligned_cols=17 Identities=12% Similarity=0.331 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHCCCCCC
Q ss_conf 77888898740010001
Q gi|254780497|r 229 ELIEKVFDSTHLTIENI 245 (324)
Q Consensus 229 ~~i~~~L~~~gl~~~di 245 (324)
.+++.+.++.|+.++.+
T Consensus 259 ~~~~~v~~~lgl~~ek~ 275 (327)
T PRK05963 259 RIVDKVCETLGIPRAKA 275 (327)
T ss_pred HHHHHHHHHCCCCHHHH
T ss_conf 99999999829797870
No 132
>TIGR02845 spore_V_AD stage V sporulation protein AD; InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation ..
Probab=95.33 E-value=0.04 Score=33.30 Aligned_cols=66 Identities=18% Similarity=0.398 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHCCCC--CCCCCCCCCCCHHHH------HHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 7777778888987400100--012102444441589------99999719787673365865193301269999999998
Q gi|254780497|r 225 EKAVELIEKVFDSTHLTIE--NIDWFVPHQANWRII------NSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVK 296 (324)
Q Consensus 225 ~~~~~~i~~~L~~~gl~~~--did~~~~Hq~~~~~~------~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~ 296 (324)
+.+.++|+.+|+|++++.+ |||+|+- ...+ ..+++.|+|| + +--||=|++..==|+|.-.+-
T Consensus 52 ~lm~~Av~~aL~Ka~l~~~PP~vD~~LA----GDLLNQ~~~anFvAR~L~iP---f---lGLygACsTs~E~L~~gA~lv 121 (331)
T TIGR02845 52 KLMEDAVNLALKKANLKKDPPDVDFFLA----GDLLNQIITANFVARELGIP---F---LGLYGACSTSMETLALGAMLV 121 (331)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEEEH----HHHHHHHHHHHHHHHHCCCC---C---EECCCHHHHHHHHHHHHHHHH
T ss_conf 9999999998753587127872111201----03666789998988745888---2---340213578999999999998
Q ss_pred CCCC
Q ss_conf 0688
Q gi|254780497|r 297 EGRV 300 (324)
Q Consensus 297 ~g~l 300 (324)
+|-+
T Consensus 122 ~GGf 125 (331)
T TIGR02845 122 DGGF 125 (331)
T ss_pred HCCC
T ss_conf 3200
No 133
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=95.31 E-value=0.046 Score=32.96 Aligned_cols=14 Identities=21% Similarity=0.451 Sum_probs=5.5
Q ss_pred HHHHHHHHHCCCCC
Q ss_conf 88889874001000
Q gi|254780497|r 231 IEKVFDSTHLTIEN 244 (324)
Q Consensus 231 i~~~L~~~gl~~~d 244 (324)
++.+.++.++.++.
T Consensus 259 ~~~i~~~Lgl~~~k 272 (326)
T PRK12879 259 IESLCEKLGIPLEK 272 (326)
T ss_pred HHHHHHHCCCCHHH
T ss_conf 99999980979888
No 134
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=95.31 E-value=0.15 Score=29.73 Aligned_cols=93 Identities=13% Similarity=0.131 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH--HHHHH--HHHHCCCH---HHHHHHHHHHHHHCCC
Q ss_conf 77778888987400100012102444441589999997197876--73365--86519330---1269999999998068
Q gi|254780497|r 227 AVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD--KVIVT--VDIHGNTS---AASIPLALAVAVKEGR 299 (324)
Q Consensus 227 ~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e--~~~~~--~~~~Gn~~---sas~~~~L~~~~~~g~ 299 (324)
-...++++|+++|++++|||.|=+|-+--...-...+.||++.| |+..+ -=-+||=. .+-+...|-+.++.
T Consensus 298 p~~A~~k~L~~agl~~~Did~~EinEAFA~q~l~~~~~lg~~~d~~kvN~~GGaiAlGHP~GAsGarl~~~l~~~L~~-- 375 (400)
T PRK13359 298 PAPATQKLLARLGMTLDQFDVIELNEAFASQGLAVLRMLGVADDDARVNPNGGAIALGHPLGASGARLVTTALYQLHR-- 375 (400)
T ss_pred HHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH--
T ss_conf 999999999976998456877786046688899999981999877748988668874888022479999999999998--
Q ss_pred CCCCCEEEEE-EECCCCCEEEEEEE
Q ss_conf 8999899999-97145014568786
Q gi|254780497|r 300 VKKGDCLLLE-AMGGGFTSGTVLLR 323 (324)
Q Consensus 300 l~~Gd~vll~-~~G~G~s~~a~llr 323 (324)
+.|.+.+.. ..|.|.-. +++++
T Consensus 376 -~~~~~Gl~t~c~ggG~G~-A~~iE 398 (400)
T PRK13359 376 -TGGRFALCTMCIGVGQGI-AIAIE 398 (400)
T ss_pred -HCCCEEEEEECCCCCHHH-EEEEE
T ss_conf -099989999622013323-69898
No 135
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=95.29 E-value=0.017 Score=35.74 Aligned_cols=16 Identities=6% Similarity=0.268 Sum_probs=8.4
Q ss_pred HHHHHHHHCCCCHHHH
Q ss_conf 8999999719787673
Q gi|254780497|r 257 IINSIVDKMKIPFDKV 272 (324)
Q Consensus 257 ~~~~~~~~lgl~~e~~ 272 (324)
.++.+.++.|+.++.+
T Consensus 245 ~~~~~L~~~gl~~~dI 260 (339)
T PRK09258 245 TWEAFLQQLGWSVEQV 260 (339)
T ss_pred HHHHHHHHCCCCHHHC
T ss_conf 9999999839998998
No 136
>pfam08392 FAE1_CUT1_RppA FAE1/Type III polyketide synthase-like protein. The members of this family are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region featured in this family contains the active site residues, as well as motifs involved in substrate binding.
Probab=95.24 E-value=0.07 Score=31.78 Aligned_cols=34 Identities=24% Similarity=0.451 Sum_probs=16.7
Q ss_pred CEEEEECCCCCC-------CC-C---CCCCCCCCCCCCCCEEEEE
Q ss_conf 316763022432-------22-4---5663232345443123440
Q gi|254780497|r 135 VMVIGSDTFSRI-------VD-W---SDRSTCVLFGDGAGALILE 168 (324)
Q Consensus 135 ~Lvv~~e~~S~~-------~d-~---~d~~~~~lfGDGAaA~ll~ 168 (324)
+|||++-.+++. ++ | .|..++-+-|-||+|-+++
T Consensus 107 iLVvNcSlf~PtPSLsamivNrykmR~di~s~nLsGMGCSAglIs 151 (290)
T pfam08392 107 ILVVNCSLFNPTPSLSAMIVNRYKMRGDIKSYNLSGMGCSAGLIS 151 (290)
T ss_pred EEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHH
T ss_conf 999967788888528999988606864300633667651134757
No 137
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=94.90 E-value=0.11 Score=30.59 Aligned_cols=37 Identities=14% Similarity=0.062 Sum_probs=17.2
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 8999999719787673365865193301269999999998
Q gi|254780497|r 257 IINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVK 296 (324)
Q Consensus 257 ~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~ 296 (324)
.++.+.++.|+..+.+-..+. |..+.-+.-.+.+.++
T Consensus 277 ~~~~~L~~~gl~~~dId~~vp---HQAn~ri~~~v~~~l~ 313 (378)
T PRK06816 277 PYLELVDKRRLDPDAIDHFLP---HYSSEYFREKIVELLA 313 (378)
T ss_pred HHHHHHHHCCCCHHHCCEEEC---CCCHHHHHHHHHHHHH
T ss_conf 999999984999899888812---6105999999999987
No 138
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=94.85 E-value=0.12 Score=30.20 Aligned_cols=16 Identities=31% Similarity=0.368 Sum_probs=7.5
Q ss_pred HHHHHHHHHHCCCCCC
Q ss_conf 7888898740010001
Q gi|254780497|r 230 LIEKVFDSTHLTIENI 245 (324)
Q Consensus 230 ~i~~~L~~~gl~~~di 245 (324)
.++.+.++.|+.++.+
T Consensus 255 ~~~~~~~~lgi~~~k~ 270 (320)
T cd00830 255 IIEAVAKRLGLPEEKV 270 (320)
T ss_pred HHHHHHHHHCCCHHHH
T ss_conf 9999999809698996
No 139
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=94.79 E-value=0.11 Score=30.49 Aligned_cols=14 Identities=0% Similarity=0.086 Sum_probs=5.3
Q ss_pred HHHHHHHCCCCHHH
Q ss_conf 99999971978767
Q gi|254780497|r 258 INSIVDKMKIPFDK 271 (324)
Q Consensus 258 ~~~~~~~lgl~~e~ 271 (324)
++.+.++.|+.++.
T Consensus 226 i~~~L~~~gl~~~d 239 (319)
T PRK09352 226 AREALEAAGLTPED 239 (319)
T ss_pred HHHHHHHCCCCHHH
T ss_conf 99999874998323
No 140
>PRK07491 consensus
Probab=94.65 E-value=0.21 Score=28.77 Aligned_cols=91 Identities=14% Similarity=0.162 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--HHHHCCCHHHH---HHHHHHHHHHCCCCCC
Q ss_conf 777888898740010001210244444158999999719787673365--86519330126---9999999998068899
Q gi|254780497|r 228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--VDIHGNTSAAS---IPLALAVAVKEGRVKK 302 (324)
Q Consensus 228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--~~~~Gn~~sas---~~~~L~~~~~~g~l~~ 302 (324)
...++++|+++|++++|||.|=+|-+--...-.+.+.||++++|+..+ .=-+||=..++ +...|.+.++. +.
T Consensus 293 v~A~~k~L~~agl~~~Did~~EinEAFA~q~l~~~~~lg~d~~kvN~~GGaiA~GHP~GaTGarl~~~l~~~L~~---~~ 369 (392)
T PRK07491 293 IPASRKALEKAGWSVGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARVLNTLLFEMQR---RD 369 (392)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---HC
T ss_conf 999999999769985568877750567888999999839978886898548873888020089999999999998---09
Q ss_pred CCEEEE-EEECCCCCEEEEEE
Q ss_conf 989999-99714501456878
Q gi|254780497|r 303 GDCLLL-EAMGGGFTSGTVLL 322 (324)
Q Consensus 303 Gd~vll-~~~G~G~s~~a~ll 322 (324)
|.+.+. ...|.|.-. ++++
T Consensus 370 ~~~gl~s~C~ggG~g~-A~li 389 (392)
T PRK07491 370 AKKGLATLCIGGGMGV-AMCV 389 (392)
T ss_pred CCEEEEEECCCCCEEE-EEEE
T ss_conf 9989999623333078-9999
No 141
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=94.56 E-value=0.18 Score=29.22 Aligned_cols=92 Identities=18% Similarity=0.225 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCH---HHHHHH--HHHHCCCH---HHHHHHHHHHHHHCCC
Q ss_conf 777888898740010001210244444158999999719787---673365--86519330---1269999999998068
Q gi|254780497|r 228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPF---DKVIVT--VDIHGNTS---AASIPLALAVAVKEGR 299 (324)
Q Consensus 228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~---e~~~~~--~~~~Gn~~---sas~~~~L~~~~~~g~ 299 (324)
...++++|+++|++++|||.|=+|-+--...-.+.+.|++++ ||+..+ .=-+||=. .+-+.+.|.+.++.
T Consensus 301 v~A~~~~L~~agl~~~Did~~EinEAFA~q~la~~~~l~i~~~d~~kvN~~GGaiAlGHP~GaTGarl~~~l~~~L~~-- 378 (404)
T PRK06205 301 VPATEKALARAGLTLDDIDLIELNEAFAAQVLAVLKEWGFSDADEERLNVNGSGISLGHPVGATGGRILATLLRELQR-- 378 (404)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH--
T ss_conf 999999999859983107744631477888999999839898873408988548874888120189999999999997--
Q ss_pred CCCCCEEEE-EEECCCCCEEEEEEE
Q ss_conf 899989999-997145014568786
Q gi|254780497|r 300 VKKGDCLLL-EAMGGGFTSGTVLLR 323 (324)
Q Consensus 300 l~~Gd~vll-~~~G~G~s~~a~llr 323 (324)
+.|.+.+. ...|.|.- .+++++
T Consensus 379 -~~~~~Gl~s~C~ggG~g-~A~~iE 401 (404)
T PRK06205 379 -RQGRYGLETMCIGGGQG-LAAVFE 401 (404)
T ss_pred -HCCCEEEEEECCCCCEE-EEEEEE
T ss_conf -09998999964210304-389999
No 142
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=94.54 E-value=0.074 Score=31.61 Aligned_cols=16 Identities=19% Similarity=0.358 Sum_probs=7.7
Q ss_pred HHHHHHHHHHCCCCCC
Q ss_conf 7888898740010001
Q gi|254780497|r 230 LIEKVFDSTHLTIENI 245 (324)
Q Consensus 230 ~i~~~L~~~gl~~~di 245 (324)
.++.+.++.++.++.+
T Consensus 258 ~~~~i~~~lgl~~~k~ 273 (327)
T CHL00203 258 ILEAVADRLSIPHSKM 273 (327)
T ss_pred HHHHHHHHHCCCHHHH
T ss_conf 9999999819797886
No 143
>PRK06845 consensus
Probab=94.48 E-value=0.23 Score=28.53 Aligned_cols=92 Identities=18% Similarity=0.218 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--HHHHCCCHHHH---HHHHHHHHHHCCCCCC
Q ss_conf 777888898740010001210244444158999999719787673365--86519330126---9999999998068899
Q gi|254780497|r 228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--VDIHGNTSAAS---IPLALAVAVKEGRVKK 302 (324)
Q Consensus 228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--~~~~Gn~~sas---~~~~L~~~~~~g~l~~ 302 (324)
...++++|+++|++++|||.|=+|-+--...-...+.|||+++++..+ .--+||=..|+ +...|-+.++. +.
T Consensus 293 ~~A~~~al~~agl~~~Did~~EinEAFA~~~l~~~~~lgl~~~~vN~~GGaiA~GHPiGATG~r~v~~l~~~L~~---~~ 369 (392)
T PRK06845 293 APAIRAALERAGLTLSDMDLVEVNEAFAAQYLAVEKELGLNPEITNVNGGAIALGHPLGASGARITITLAYELKR---RG 369 (392)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---CC
T ss_conf 999999999859996568866761467889999999709891542888418860988110489999999999987---09
Q ss_pred CCEEEE-EEECCCCCEEEEEEE
Q ss_conf 989999-997145014568786
Q gi|254780497|r 303 GDCLLL-EAMGGGFTSGTVLLR 323 (324)
Q Consensus 303 Gd~vll-~~~G~G~s~~a~llr 323 (324)
|.+.+. ...|.|.- .+++++
T Consensus 370 g~~gl~~~c~ggG~g-~a~~iE 390 (392)
T PRK06845 370 AKYGVGSACIGGGQG-IALVLE 390 (392)
T ss_pred CCEEEEEEEEECCCE-EEEEEE
T ss_conf 988999870000303-179998
No 144
>PRK08234 consensus
Probab=94.43 E-value=0.23 Score=28.42 Aligned_cols=93 Identities=18% Similarity=0.165 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--HHHHCCCH---HHHHHHHHHHHHHCCCCC
Q ss_conf 7777888898740010001210244444158999999719787673365--86519330---126999999999806889
Q gi|254780497|r 227 AVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--VDIHGNTS---AASIPLALAVAVKEGRVK 301 (324)
Q Consensus 227 ~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--~~~~Gn~~---sas~~~~L~~~~~~g~l~ 301 (324)
-...++++|+++|++++|||.|=+|-+--...-...+.|+++++|+..+ .=-+||=. .+-+.+.|-+.++. +
T Consensus 299 p~~A~~~~L~ragl~~~Did~~EinEAFA~~~l~~~~~l~i~~~kvN~~GGaiAlGHP~GaTGarl~~~l~~~L~~---~ 375 (400)
T PRK08234 299 PVFATRKALRRAGLTVDDIDLVELNEAFAAQALACIRELGLDRAKVNVNGGAIALGHPLGASGARILTTLIYEMRR---R 375 (400)
T ss_pred HHHHHHHHHHHCCCCHHHCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---C
T ss_conf 6999999998749984228756760777888999999848978877898548874888032189999999999998---0
Q ss_pred CCCEEEE-EEECCCCCEEEEEEE
Q ss_conf 9989999-997145014568786
Q gi|254780497|r 302 KGDCLLL-EAMGGGFTSGTVLLR 323 (324)
Q Consensus 302 ~Gd~vll-~~~G~G~s~~a~llr 323 (324)
.+.+.+. ...|.|.-. +++++
T Consensus 376 ~~~~Gl~s~C~ggG~g~-a~liE 397 (400)
T PRK08234 376 GSRYGLATMCIGVGQGI-ATIVE 397 (400)
T ss_pred CCCEEEEEECCCCCCEE-EEEEE
T ss_conf 99889999643214032-89999
No 145
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=94.20 E-value=0.32 Score=27.58 Aligned_cols=91 Identities=24% Similarity=0.327 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--HHHHCCCH---HHHHHHHHHHHHHCCCCCC
Q ss_conf 777888898740010001210244444158999999719787673365--86519330---1269999999998068899
Q gi|254780497|r 228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--VDIHGNTS---AASIPLALAVAVKEGRVKK 302 (324)
Q Consensus 228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--~~~~Gn~~---sas~~~~L~~~~~~g~l~~ 302 (324)
...++++|+++|++++|||.|=+|-+--...-...+.|++++||+..+ -=-+||=. .+-+.+.|.+.++. +.
T Consensus 303 v~A~~k~L~~agl~~~did~~EinEAFA~q~la~~~~l~id~~kvN~~GGaiAlGHP~GaSGariv~~l~~~L~~---~~ 379 (402)
T PRK08242 303 VPATRKALAKAGLTISDIDLFELNEAFASVVLRFMKALGIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELER---RG 379 (402)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---CC
T ss_conf 999999999869984568878860666888999999849988884998667874888035589999999999987---09
Q ss_pred CCEEEE-EEECCCCCEEEEEE
Q ss_conf 989999-99714501456878
Q gi|254780497|r 303 GDCLLL-EAMGGGFTSGTVLL 322 (324)
Q Consensus 303 Gd~vll-~~~G~G~s~~a~ll 322 (324)
|.+.+. ...|.|.-. ++++
T Consensus 380 ~~~Gl~s~C~ggG~g~-A~~i 399 (402)
T PRK08242 380 KRTALITLCVGGGMGI-ATII 399 (402)
T ss_pred CCEEEEEECCCCCCEE-EEEE
T ss_conf 9889999733336032-8999
No 146
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=94.13 E-value=0.082 Score=31.32 Aligned_cols=27 Identities=33% Similarity=0.297 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf 999999999997402123544336650
Q gi|254780497|r 54 SLGEAAARDALHHAEMSVDDIDLIIVA 80 (324)
Q Consensus 54 ~la~~Aa~~al~~a~~~~~~Id~ii~~ 80 (324)
+...++++++|+++|++|+|||++...
T Consensus 145 ~~~~~~i~~al~~agl~~~dId~v~~H 171 (254)
T cd00327 145 EGLARAARKALEGAGLTPSDIDYVEAH 171 (254)
T ss_pred HHHHHHHHHHHHHCCCCHHHCCEEEEC
T ss_conf 899999999999839986452579978
No 147
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.12 E-value=0.17 Score=29.35 Aligned_cols=18 Identities=17% Similarity=0.008 Sum_probs=9.9
Q ss_pred CCCCCCCCCCCEEEEECC
Q ss_conf 323234544312344026
Q gi|254780497|r 153 STCVLFGDGAGALILEGV 170 (324)
Q Consensus 153 ~~~~lfGDGAaA~ll~~~ 170 (324)
...+-+||-.--++++++
T Consensus 227 ~Mgwdv~d~G~~~vlSrd 244 (356)
T COG3424 227 IMGWDVGDQGLKVVLSRD 244 (356)
T ss_pred CCCEEECCCCEEEEECCC
T ss_conf 011530488479997573
No 148
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=94.08 E-value=0.23 Score=28.52 Aligned_cols=15 Identities=20% Similarity=0.337 Sum_probs=11.8
Q ss_pred CCCCCCCEEEEECCC
Q ss_conf 345443123440265
Q gi|254780497|r 157 LFGDGAGALILEGVE 171 (324)
Q Consensus 157 lfGDGAaA~ll~~~~ 171 (324)
-+.|||+|++|.+.+
T Consensus 246 ~~~DGAAavll~Se~ 260 (390)
T PRK06504 246 QICDGASGVMVVNER 260 (390)
T ss_pred CCCCHHHHHHHHHHH
T ss_conf 777616888874499
No 149
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.95 E-value=0.059 Score=32.23 Aligned_cols=11 Identities=0% Similarity=0.060 Sum_probs=4.0
Q ss_pred HHHHHCCCCHH
Q ss_conf 99997197876
Q gi|254780497|r 260 SIVDKMKIPFD 270 (324)
Q Consensus 260 ~~~~~lgl~~e 270 (324)
.+.++.|+..+
T Consensus 238 ~~L~~~gl~~~ 248 (329)
T PRK07204 238 KLLMDTGYSLA 248 (329)
T ss_pred HHHHHCCCCHH
T ss_conf 99987199978
No 150
>PRK06840 hypothetical protein; Validated
Probab=93.95 E-value=0.072 Score=31.69 Aligned_cols=16 Identities=13% Similarity=0.183 Sum_probs=10.3
Q ss_pred HHHHHHHHCCCCHHHH
Q ss_conf 8999999719787673
Q gi|254780497|r 257 IINSIVDKMKIPFDKV 272 (324)
Q Consensus 257 ~~~~~~~~lgl~~e~~ 272 (324)
+++..+++.|+.++.+
T Consensus 242 ~i~~~L~~~gl~~~DI 257 (337)
T PRK06840 242 VIREALRKSGYTPKDI 257 (337)
T ss_pred HHHHHHHHCCCCHHHC
T ss_conf 9999999849995786
No 151
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=93.90 E-value=0.32 Score=27.52 Aligned_cols=91 Identities=21% Similarity=0.213 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--HHHHCCCH---HHHHHHHHHHHHHCCCCCC
Q ss_conf 777888898740010001210244444158999999719787673365--86519330---1269999999998068899
Q gi|254780497|r 228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--VDIHGNTS---AASIPLALAVAVKEGRVKK 302 (324)
Q Consensus 228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--~~~~Gn~~---sas~~~~L~~~~~~g~l~~ 302 (324)
...++++|+++|++++|||.|=+|-+--...-...+.||+++||+..+ .=-+||=. .+-+...|-+.++. +.
T Consensus 305 v~A~~~~L~~agl~~~Did~~EinEAFA~q~l~~~~~lgid~~kvNv~GGaiAlGHP~GAsGarl~~~l~~~L~~---~~ 381 (405)
T PRK07851 305 IEASKQALARAGMTIDDIDLVEINEAFAVQVLGSARELGIDEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQT---HD 381 (405)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---CC
T ss_conf 999999999769980248755640667888999999848988881998558873887031179999999999998---09
Q ss_pred CCEEEE-EEECCCCCEEEEE
Q ss_conf 989999-9971450145687
Q gi|254780497|r 303 GDCLLL-EAMGGGFTSGTVL 321 (324)
Q Consensus 303 Gd~vll-~~~G~G~s~~a~l 321 (324)
|.+.+. ...|.|.....++
T Consensus 382 ~~~gl~t~C~ggG~g~A~~i 401 (405)
T PRK07851 382 KTFGLETMCVGGGQGMAMVI 401 (405)
T ss_pred CCEEEEEECCCCCEEEEEEE
T ss_conf 98899996331040538999
No 152
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=93.89 E-value=0.29 Score=27.83 Aligned_cols=91 Identities=20% Similarity=0.211 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--HHHHCCCHHH---HHHHHHHHHHHCCCCCC
Q ss_conf 777888898740010001210244444158999999719787673365--8651933012---69999999998068899
Q gi|254780497|r 228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--VDIHGNTSAA---SIPLALAVAVKEGRVKK 302 (324)
Q Consensus 228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--~~~~Gn~~sa---s~~~~L~~~~~~g~l~~ 302 (324)
...++++|+++|++++|||.|=+|-+--...-.+.+.||+++||+..+ .--+||=..+ -+.+.|-+.++. +.
T Consensus 283 ~~A~~~~l~~agl~~~Did~~EinEAFA~~~l~~~~~lg~~~~kvN~~GGaia~GHP~GATG~r~~~~l~~~L~~---~~ 359 (382)
T PRK07801 283 IPATRYALDKTGLTIDDIDVVEINEAFAPVVMAWLKETGADPEKVNPNGGAIALGHPLGATGAKLMTTLLHELER---TG 359 (382)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---CC
T ss_conf 999999999849981138855740366888999999828992435888439871988032799999999999987---09
Q ss_pred CCEEEE-EEECCCCCEEEEEE
Q ss_conf 989999-99714501456878
Q gi|254780497|r 303 GDCLLL-EAMGGGFTSGTVLL 322 (324)
Q Consensus 303 Gd~vll-~~~G~G~s~~a~ll 322 (324)
|.+.+. ...|.|.-. ++++
T Consensus 360 ~~~g~~s~c~ggG~g~-a~ii 379 (382)
T PRK07801 360 GRYGLQTMCEGGGTAN-VTII 379 (382)
T ss_pred CCEEEEEECCCCCCEE-EEEE
T ss_conf 9989999533013232-6989
No 153
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=93.85 E-value=0.32 Score=27.58 Aligned_cols=14 Identities=7% Similarity=0.207 Sum_probs=7.7
Q ss_pred CCCCCCCEEEEECC
Q ss_conf 12354433665012
Q gi|254780497|r 69 MSVDDIDLIIVATS 82 (324)
Q Consensus 69 ~~~~~Id~ii~~s~ 82 (324)
|.-.+.|.+|++.+
T Consensus 158 I~~G~~d~~i~gg~ 171 (379)
T PRK05952 158 IQTGQCQRVIAGAV 171 (379)
T ss_pred HHCCCCCEEEEEEE
T ss_conf 98399887986787
No 154
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=93.68 E-value=0.52 Score=26.23 Aligned_cols=92 Identities=21% Similarity=0.300 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH--HHHHH--HHHHCCCH---HHHHHHHHHHHHHCCCC
Q ss_conf 7778888987400100012102444441589999997197876--73365--86519330---12699999999980688
Q gi|254780497|r 228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD--KVIVT--VDIHGNTS---AASIPLALAVAVKEGRV 300 (324)
Q Consensus 228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e--~~~~~--~~~~Gn~~---sas~~~~L~~~~~~g~l 300 (324)
...++++|+++|++++|||.|=+|-+--...-...+.||++.| |+..+ .--+||=. .+-+.+.|.+.++.
T Consensus 299 v~A~~~~L~~agl~~~Did~~EinEAFA~~~l~~~~~lgl~~d~~kvN~~GGaiA~GHP~GATGarl~~~l~~~L~~--- 375 (401)
T PRK08131 299 VEAIKKALARAGLTLDDMDIIEINEAFASQVLSCLKGLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTAARELQR--- 375 (401)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---
T ss_conf 99999999975998123877785026688899999980999887808988668873888020089999999999987---
Q ss_pred CCCCEEEEE-EECCCCCEEEEEEE
Q ss_conf 999899999-97145014568786
Q gi|254780497|r 301 KKGDCLLLE-AMGGGFTSGTVLLR 323 (324)
Q Consensus 301 ~~Gd~vll~-~~G~G~s~~a~llr 323 (324)
+.|.+.+.. ..|.|.- .+++++
T Consensus 376 ~~~~~g~~t~c~ggG~g-~a~~iE 398 (401)
T PRK08131 376 RGGRYAVVSLCIGVGQG-LAMVIE 398 (401)
T ss_pred CCCCEEEEEECCCCCCE-EEEEEE
T ss_conf 19988999962210413-089999
No 155
>PRK07855 lipid-transfer protein; Provisional
Probab=93.60 E-value=0.22 Score=28.66 Aligned_cols=16 Identities=25% Similarity=0.511 Sum_probs=10.8
Q ss_pred CC--EEEEEEEEEECCCCE
Q ss_conf 92--269999999649841
Q gi|254780497|r 1 MI--RSTVRGIGLSLPRRV 17 (324)
Q Consensus 1 M~--~~~I~~~g~ylP~~~ 17 (324)
|| +|.|.|+|.. |-.+
T Consensus 1 ~m~~~vAIvGvG~t-~f~r 18 (386)
T PRK07855 1 MLSGKAAIVGIGAT-EFSK 18 (386)
T ss_pred CCCCCEEEEEEEEE-CCEE
T ss_conf 98998899975530-2246
No 156
>PRK08041 consensus
Probab=93.59 E-value=0.43 Score=26.77 Aligned_cols=92 Identities=14% Similarity=0.152 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--HHHHCCCHH---HHHHHHHHHHHHCCCCCC
Q ss_conf 777888898740010001210244444158999999719787673365--865193301---269999999998068899
Q gi|254780497|r 228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--VDIHGNTSA---ASIPLALAVAVKEGRVKK 302 (324)
Q Consensus 228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--~~~~Gn~~s---as~~~~L~~~~~~g~l~~ 302 (324)
...++++|+++|++++|||.|=+|-+--...-...+.|+++++|+..+ .--+||=.. +-+.+.|-+.++. +.
T Consensus 293 v~A~~k~L~~agl~~~Did~~EinEAFA~q~l~~~~~l~~d~~~vN~~GGaiA~GHP~GATGarl~~~l~~~L~~---~~ 369 (391)
T PRK08041 293 VYATRRCLERVGWQLADVDLIEANEAFAAQALSVGKMLEWDERRVNVNGGAIALGHPIGASGCRILVSLVHEMVK---RN 369 (391)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---HC
T ss_conf 999999999859985448678860477999999999738983638988528874888121589999999999998---19
Q ss_pred CCEEEEE-EECCCCCEEEEEEE
Q ss_conf 9899999-97145014568786
Q gi|254780497|r 303 GDCLLLE-AMGGGFTSGTVLLR 323 (324)
Q Consensus 303 Gd~vll~-~~G~G~s~~a~llr 323 (324)
|.+.+.. ..|.|.- .+++++
T Consensus 370 ~~~gl~s~C~ggG~g-~A~~iE 390 (391)
T PRK08041 370 ARKGLATLCIGGGQG-VALTIE 390 (391)
T ss_pred CCEEEEEECCCCCEE-EEEEEE
T ss_conf 998999973433306-799996
No 157
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=93.54 E-value=0.37 Score=27.15 Aligned_cols=93 Identities=15% Similarity=0.196 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH--HHHCCCH---HHHHHHHHHHHHHCCCCC
Q ss_conf 77778888987400100012102444441589999997197876733658--6519330---126999999999806889
Q gi|254780497|r 227 AVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTV--DIHGNTS---AASIPLALAVAVKEGRVK 301 (324)
Q Consensus 227 ~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~--~~~Gn~~---sas~~~~L~~~~~~g~l~ 301 (324)
-...++++|+++|++.+|||.|=+|-+--...-.+.+.|+++.||+..+- =-+||=. .+-+...|-+.++. +
T Consensus 292 p~~A~~k~L~~agl~~~Did~~EinEAFA~q~l~~~~~l~~d~~kvN~~GGaiAlGHP~GaTGarl~~~l~~~L~~---~ 368 (392)
T PRK06633 292 PVPASQKALSKAGWSVNDLEVIEVNEAFAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHNLRR---A 368 (392)
T ss_pred HHHHHHHHHHHCCCCHHHCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---C
T ss_conf 1999999999849983108678860366888999998709978886898558874788111589999999999987---1
Q ss_pred CCCEEEEE-EECCCCCEEEEEEE
Q ss_conf 99899999-97145014568786
Q gi|254780497|r 302 KGDCLLLE-AMGGGFTSGTVLLR 323 (324)
Q Consensus 302 ~Gd~vll~-~~G~G~s~~a~llr 323 (324)
.|.+.+.. ..|.|.- .+++++
T Consensus 369 ~~~~Gl~s~C~ggG~G-~A~iiE 390 (392)
T PRK06633 369 KAKKGLVTLCIGGGMG-MAMCVE 390 (392)
T ss_pred CCCEEEEEECCCCCHH-HEEEEE
T ss_conf 9998999962310430-369998
No 158
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=93.48 E-value=0.34 Score=27.37 Aligned_cols=16 Identities=25% Similarity=0.360 Sum_probs=12.0
Q ss_pred CCCCCCCEEEEECCCC
Q ss_conf 3454431234402654
Q gi|254780497|r 157 LFGDGAGALILEGVEV 172 (324)
Q Consensus 157 lfGDGAaA~ll~~~~~ 172 (324)
-..|||+|+||.+.+.
T Consensus 243 ~~~DGAAavll~s~~~ 258 (387)
T PRK07850 243 QISDGAAAVLWMDEDR 258 (387)
T ss_pred CCCCHHHHHHHHHHHH
T ss_conf 5554068988836999
No 159
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=93.39 E-value=0.36 Score=27.24 Aligned_cols=17 Identities=41% Similarity=0.489 Sum_probs=12.6
Q ss_pred CCCCCCCEEEEECCCCC
Q ss_conf 34544312344026544
Q gi|254780497|r 157 LFGDGAGALILEGVEVK 173 (324)
Q Consensus 157 lfGDGAaA~ll~~~~~~ 173 (324)
-+.|||+|+||-+.+..
T Consensus 255 ~lsDGAAavll~s~~~a 271 (399)
T PRK09052 255 QTSDGAGAVILVSEKAL 271 (399)
T ss_pred CCCCHHHHHHHHHHHHH
T ss_conf 44306788877349999
No 160
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=93.35 E-value=0.37 Score=27.18 Aligned_cols=91 Identities=16% Similarity=0.158 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH--HHHHH--HHHHCCCHH---HHHHHHHHHHHHCCCC
Q ss_conf 7778888987400100012102444441589999997197876--73365--865193301---2699999999980688
Q gi|254780497|r 228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD--KVIVT--VDIHGNTSA---ASIPLALAVAVKEGRV 300 (324)
Q Consensus 228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e--~~~~~--~~~~Gn~~s---as~~~~L~~~~~~g~l 300 (324)
...++++|+++|++++|||.|=+|-+--...-...+.||+++| |+..+ .=-+||=.. +=+...|-+.++.
T Consensus 300 ~~A~~~~L~~agl~~~DiD~~EinEAFA~q~l~~~~~lg~~~d~~kvN~~GGaiAlGHP~GATGari~~~l~~~L~~--- 376 (401)
T PRK09050 300 APATRKLLARLGLTIDQFDVIELNEAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLER--- 376 (401)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEECHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---
T ss_conf 99999999985998544878997024377799999984999885507999678875888022289999999999998---
Q ss_pred CCCCEEEEE-EECCCCCEEEEEE
Q ss_conf 999899999-9714501456878
Q gi|254780497|r 301 KKGDCLLLE-AMGGGFTSGTVLL 322 (324)
Q Consensus 301 ~~Gd~vll~-~~G~G~s~~a~ll 322 (324)
+.|.+.+.. ..|.|.-. ++++
T Consensus 377 ~~~~~gl~s~C~ggG~g~-A~~i 398 (401)
T PRK09050 377 TGGRYALCTMCIGVGQGI-ALAI 398 (401)
T ss_pred HCCCEEEEEECCCCCCEE-EEEE
T ss_conf 099989999754335044-8999
No 161
>pfam02803 Thiolase_C Thiolase, C-terminal domain. Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase.
Probab=93.32 E-value=0.22 Score=28.63 Aligned_cols=99 Identities=24% Similarity=0.250 Sum_probs=62.1
Q ss_pred CCCHHHH---HHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC--------CCCCCCCCCCCCHH
Q ss_conf 8899999---999999999740212354433665012233458985310011220268--------64444210122003
Q gi|254780497|r 49 DETTASL---GEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR--------GFAFDMQAVCSGFV 117 (324)
Q Consensus 49 ~e~~~~l---a~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~--------~~~~di~~~C~~~~ 117 (324)
+-++.+| .+.|++++|++++++.+|||++=..-.+. +.+-...++||++. +.++--=.||+|.-
T Consensus 14 g~~P~~~~~ap~~A~~~lL~r~gl~~~Did~~EinEAFA-----~~~l~~~~~l~id~ekvN~~GGaiAlGHP~GaSGar 88 (123)
T pfam02803 14 GVDPAIMGIGPAYAIPKALKKAGLTVNDIDLFEINEAFA-----AQALAVAKDLGIDPEKVNVNGGAIALGHPLGASGAR 88 (123)
T ss_pred ECCHHHHCCCHHHHHHHHHHHCCCCHHHCCEEEECHHHH-----HHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHH
T ss_conf 459889613699999999998299855466456414567-----778999997198920148988734427884662489
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 4678889989641556531676302243222456632323454431234402
Q gi|254780497|r 118 YAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGDGAGALILEG 169 (324)
Q Consensus 118 ~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGDGAaA~ll~~ 169 (324)
..+.++..|-+.+ .+++++..+- -|..+.|++||+
T Consensus 89 lv~~l~~~L~~~~-~~~G~as~C~----------------gGG~g~A~llER 123 (123)
T pfam02803 89 ILVTLLHELKRRG-GKYGLATLCI----------------GGGQGVAMIIER 123 (123)
T ss_pred HHHHHHHHHHHHC-CCEEEEEEEC----------------CCCEEEEEEEEC
T ss_conf 9999999999839-9999999703----------------556088999979
No 162
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=93.29 E-value=0.52 Score=26.19 Aligned_cols=91 Identities=22% Similarity=0.255 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--HHHHCCCHHH---HHHHHHHHHHHCCCCCC
Q ss_conf 777888898740010001210244444158999999719787673365--8651933012---69999999998068899
Q gi|254780497|r 228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--VDIHGNTSAA---SIPLALAVAVKEGRVKK 302 (324)
Q Consensus 228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--~~~~Gn~~sa---s~~~~L~~~~~~g~l~~ 302 (324)
...++++|+++|++++|||.|=+|-+--..--...+.||++++++..+ .--+||=..| -+.+.|.+.++. +.
T Consensus 295 ~~A~~~al~~agl~~~Did~~EinEAFA~~~l~~~~~lg~~~~~vN~~GGaia~GHP~GATGar~v~~l~~~L~~---~~ 371 (394)
T PRK06445 295 VPASRKALEKAGLKVKDIDLWEINEAFAVVVLYAIKELGIDPERVNIRGGAIAIGHPLGATGARIIGTLARQLQI---KG 371 (394)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---HC
T ss_conf 999999999739986678866760377888999999809887765898538872988021389999999999998---19
Q ss_pred CCEEEE-EEECCCCCEEEEEE
Q ss_conf 989999-99714501456878
Q gi|254780497|r 303 GDCLLL-EAMGGGFTSGTVLL 322 (324)
Q Consensus 303 Gd~vll-~~~G~G~s~~a~ll 322 (324)
|.+.+. ...|.|.-. ++++
T Consensus 372 ~~~g~~t~c~ggG~g~-A~~i 391 (394)
T PRK06445 372 KDYGVATLCVGGGQGA-AVVL 391 (394)
T ss_pred CCEEEEEECCCCCCEE-EEEE
T ss_conf 9989999522003120-7999
No 163
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=93.28 E-value=0.4 Score=26.97 Aligned_cols=93 Identities=15% Similarity=0.156 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH--HHHCCCHHH---HHHHHHHHHHHCCCCC
Q ss_conf 77778888987400100012102444441589999997197876733658--651933012---6999999999806889
Q gi|254780497|r 227 AVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTV--DIHGNTSAA---SIPLALAVAVKEGRVK 301 (324)
Q Consensus 227 ~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~--~~~Gn~~sa---s~~~~L~~~~~~g~l~ 301 (324)
-...++++|+++|++++|||.|=+|-+-....-.+.+.|+++++|+..+- =-+||=..+ -+.+.|-+.++. +
T Consensus 293 p~~A~~k~L~~agl~~~Did~~EinEAFA~q~l~~~~~l~id~~kvN~~GGaiAlGHP~GATGarl~~~l~~~L~~---~ 369 (392)
T PRK05656 293 PVSATRRCLDKAGWSLAELDLIEANEAFAAQSLAVGKELGWDAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIR---R 369 (392)
T ss_pred HHHHHHHHHHHCCCCHHCCCEEEECCHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---C
T ss_conf 9999999999849983108777852167899999999848985766888548871888031379999999999987---3
Q ss_pred CCCEEEEE-EECCCCCEEEEEEE
Q ss_conf 99899999-97145014568786
Q gi|254780497|r 302 KGDCLLLE-AMGGGFTSGTVLLR 323 (324)
Q Consensus 302 ~Gd~vll~-~~G~G~s~~a~llr 323 (324)
.|.+.+.. ..|.|.- .+++++
T Consensus 370 ~~~~gl~s~C~gGG~g-~A~~iE 391 (392)
T PRK05656 370 DAKKGLATLCIGGGQG-VALAIE 391 (392)
T ss_pred CCCEEEEEECCCCCCE-EEEEEE
T ss_conf 9998999972443308-899997
No 164
>PRK04262 hypothetical protein; Provisional
Probab=93.15 E-value=0.12 Score=30.37 Aligned_cols=26 Identities=15% Similarity=0.138 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf 99999999974021235443366501
Q gi|254780497|r 56 GEAAARDALHHAEMSVDDIDLIIVAT 81 (324)
Q Consensus 56 a~~Aa~~al~~a~~~~~~Id~ii~~s 81 (324)
..++++++|+++|++++|||++|+..
T Consensus 211 ~~~~~~~~l~~~g~~~~did~~v~HQ 236 (346)
T PRK04262 211 IISAAKGLMEKLGTKPSDYDYAVFHQ 236 (346)
T ss_pred HHHHHHHHHHHCCCCHHHCCEEECCC
T ss_conf 99999999998299978858895167
No 165
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=93.12 E-value=0.47 Score=26.48 Aligned_cols=13 Identities=23% Similarity=0.199 Sum_probs=6.6
Q ss_pred CCCCCCEEEEECC
Q ss_conf 2354433665012
Q gi|254780497|r 70 SVDDIDLIIVATS 82 (324)
Q Consensus 70 ~~~~Id~ii~~s~ 82 (324)
.-.+.|.+|++.+
T Consensus 175 ~~G~~d~~i~Gg~ 187 (395)
T PRK09185 175 EAGLCDAVIVGGV 187 (395)
T ss_pred HCCCCCEEEEECC
T ss_conf 8599888998021
No 166
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=93.07 E-value=0.17 Score=29.37 Aligned_cols=92 Identities=22% Similarity=0.310 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHH----HHH------HHHHHCCC-------CHHHHHHH--HHHHCCCH---HH
Q ss_conf 77788889874001000121024444415----899------99997197-------87673365--86519330---12
Q gi|254780497|r 228 VELIEKVFDSTHLTIENIDWFVPHQANWR----IIN------SIVDKMKI-------PFDKVIVT--VDIHGNTS---AA 285 (324)
Q Consensus 228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~----~~~------~~~~~lgl-------~~e~~~~~--~~~~Gn~~---sa 285 (324)
...++++|+++|++++|||.|=+|-+--. .++ ...+.||+ +++|+..+ .=-+||=. .+
T Consensus 310 v~A~~k~L~~agl~~~DiD~~EinEAFAaq~la~~~~~~~~~~~~~~lG~~~~~~~id~~kvN~~GGaiAlGHP~GaTGa 389 (426)
T PRK08170 310 VHAATPLLQRHGLTLEDIDYWEINEAFAAQVLACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGA 389 (426)
T ss_pred HHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHH
T ss_conf 99999999980998676552434046689999999874001356776076533456981228988548874777210389
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEE-EECCCCCEEEEEEE
Q ss_conf 699999999980688999899999-97145014568786
Q gi|254780497|r 286 SIPLALAVAVKEGRVKKGDCLLLE-AMGGGFTSGTVLLR 323 (324)
Q Consensus 286 s~~~~L~~~~~~g~l~~Gd~vll~-~~G~G~s~~a~llr 323 (324)
-+...|.+.+++ +.|.+.+.. ..|.|.- .+++++
T Consensus 390 rl~~~l~~~L~~---~~~~~gl~t~C~ggG~g-~A~llE 424 (426)
T PRK08170 390 RIVLHLLHALKR---RGTKRGIAAICIGGGQG-GAMLVE 424 (426)
T ss_pred HHHHHHHHHHHH---HCCCEEEEEECCHHHHH-HEEEEE
T ss_conf 999999999998---19998999862202240-458897
No 167
>pfam02801 Ketoacyl-synt_C Beta-ketoacyl synthase, C-terminal domain. The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=93.03 E-value=0.26 Score=28.09 Aligned_cols=78 Identities=14% Similarity=0.150 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH-----HHHHHHHCCCCHHHH-HH-HHHHHCCCHHHHHHHHHHH---H
Q ss_conf 777777888898740010001210244444158-----999999719787673-36-5865193301269999999---9
Q gi|254780497|r 225 EKAVELIEKVFDSTHLTIENIDWFVPHQANWRI-----INSIVDKMKIPFDKV-IV-TVDIHGNTSAASIPLALAV---A 294 (324)
Q Consensus 225 ~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~-----~~~~~~~lgl~~e~~-~~-~~~~~Gn~~sas~~~~L~~---~ 294 (324)
....++++++|++++++++||+++-.|-.+-.. .+.+.+.++=....+ +. +=..+||+.+++=.+.+-. .
T Consensus 25 ~~~~~~i~~Al~~agi~p~~I~~i~aHgtgT~~gD~~E~~ai~~~f~~~~~~~~i~S~Ks~~GH~~~AsG~~~li~~~l~ 104 (117)
T pfam02801 25 PAQARAIRAALADAGLDPEDVDYVEAHGTGTPLGDPIEAEALKAVFGPGRRPLPVGSVKSNIGHLEAAAGVAGLIKAVLA 104 (117)
T ss_pred HHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999999999990989989798987537685437999999999966377887677741153556376799999999999
Q ss_pred HHCCCCCC
Q ss_conf 98068899
Q gi|254780497|r 295 VKEGRVKK 302 (324)
Q Consensus 295 ~~~g~l~~ 302 (324)
++++.+.|
T Consensus 105 l~~g~ipp 112 (117)
T pfam02801 105 LRHGVIPP 112 (117)
T ss_pred HHCCCCCC
T ss_conf 97697388
No 168
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.86 E-value=0.49 Score=26.39 Aligned_cols=16 Identities=13% Similarity=-0.002 Sum_probs=9.5
Q ss_pred HHHHHHHCCCCHHHHH
Q ss_conf 9999997197876733
Q gi|254780497|r 258 INSIVDKMKIPFDKVI 273 (324)
Q Consensus 258 ~~~~~~~lgl~~e~~~ 273 (324)
++.++++.|+.++.+-
T Consensus 277 i~~~L~~~gl~~~DId 292 (372)
T PRK07515 277 IVEHLAENGLTPADVK 292 (372)
T ss_pred HHHHHHHHCCCHHHCC
T ss_conf 9999998298988899
No 169
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=92.71 E-value=0.37 Score=27.18 Aligned_cols=17 Identities=24% Similarity=0.182 Sum_probs=12.6
Q ss_pred CCCCCCCEEEEECCCCC
Q ss_conf 34544312344026544
Q gi|254780497|r 157 LFGDGAGALILEGVEVK 173 (324)
Q Consensus 157 lfGDGAaA~ll~~~~~~ 173 (324)
-+.|||+|+||.+.+..
T Consensus 216 ~~sDGAAavll~se~~A 232 (361)
T PRK06690 216 GVNDGACAVLVMEEGQA 232 (361)
T ss_pred CCCCHHHHHHHHCHHHH
T ss_conf 30007899998579999
No 170
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=92.70 E-value=0.34 Score=27.41 Aligned_cols=89 Identities=17% Similarity=0.201 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHH---HHH---HHHHH---CCCHHHHHHHHHHHHH
Q ss_conf 77777788889874001000121024444415899999971978767---336---58651---9330126999999999
Q gi|254780497|r 225 EKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDK---VIV---TVDIH---GNTSAASIPLALAVAV 295 (324)
Q Consensus 225 ~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~---~~~---~~~~~---Gn~~sas~~~~L~~~~ 295 (324)
..+.-..+++|+.+|+..+|||+|=+-.=-....+..++.|||+.+. -.+ =+.-+ ||.++--....+.+.+
T Consensus 294 ~a~~~~~~~al~~ag~~~~di~~~DlYSCFP~av~~~~~~lgl~~~~~~r~lTvTGGl~f~GGp~NnY~~hsia~mv~~l 373 (502)
T PRK08257 294 PAIRAAGARALALAGLGIDDIDAFDLYSCFPSAVQMAARELGLPLDDDPRPLTVTGGLTFFGGPGNNYVTHSIAEMVERL 373 (502)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEHHHCCHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 89999999999980998001461103421638999999973999667888603406755567875037899999999999
Q ss_pred HCCCCCCCCEEEEEEECCCCC
Q ss_conf 806889998999999714501
Q gi|254780497|r 296 KEGRVKKGDCLLLEAMGGGFT 316 (324)
Q Consensus 296 ~~g~l~~Gd~vll~~~G~G~s 316 (324)
+ -++|++.|+.+.|.=+|
T Consensus 374 R---~~~~~~GLvtangG~lT 391 (502)
T PRK08257 374 R---ANPGRRGLVTANGGYLT 391 (502)
T ss_pred H---HCCCCEEEEEECCCEEE
T ss_conf 7---18997389980246264
No 171
>PRK07937 lipid-transfer protein; Provisional
Probab=92.69 E-value=0.21 Score=28.69 Aligned_cols=27 Identities=15% Similarity=0.220 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEE
Q ss_conf 999999999999974021235443366
Q gi|254780497|r 52 TASLGEAAARDALHHAEMSVDDIDLII 78 (324)
Q Consensus 52 ~~~la~~Aa~~al~~a~~~~~~Id~ii 78 (324)
...+....++.-+++.+.+++++..|.
T Consensus 138 ~~~~~al~ar~~m~~~g~t~E~lA~Va 164 (352)
T PRK07937 138 SVSMAGLQARLGLDAGKWTEEQMAEVA 164 (352)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 789999999999985499999999999
No 172
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=92.61 E-value=0.44 Score=26.70 Aligned_cols=10 Identities=10% Similarity=0.219 Sum_probs=4.6
Q ss_pred CCCCEEEEEC
Q ss_conf 5443366501
Q gi|254780497|r 72 DDIDLIIVAT 81 (324)
Q Consensus 72 ~~Id~ii~~s 81 (324)
.+.|.+|++.
T Consensus 192 G~~D~~iaGG 201 (425)
T PRK06501 192 GETDRALCIA 201 (425)
T ss_pred CCCCEEEEEE
T ss_conf 8988899933
No 173
>pfam08541 ACP_syn_III_C 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal. This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.
Probab=92.47 E-value=0.055 Score=32.42 Aligned_cols=69 Identities=20% Similarity=0.356 Sum_probs=41.3
Q ss_pred HHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCC-CCC----CCCCCCHHHHHHHHHHHHHHCCC---CCC
Q ss_conf 9740212354433665012233458985310011220268644-442----10122003467888998964155---653
Q gi|254780497|r 64 LHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFA-FDM----QAVCSGFVYAVTTADSYIRSGVV---RRV 135 (324)
Q Consensus 64 l~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~-~di----~~~C~~~~~al~~A~~li~~g~~---~~~ 135 (324)
|+++|++++|||.+++........ -.++++||+++.-. ..+ +.++++-+.+|..+ ++.+.. .++
T Consensus 1 L~~~g~~~~dId~~i~Hq~~~~~~-----~~i~~~lgi~~~k~~~~~~~~GN~~sasip~~L~~~---~~~~~i~~Gd~v 72 (90)
T pfam08541 1 LEKAGLTPDDIDWFVPHQANLRII-----DAVAKRLGLPPEKVVVNLDRYGNTSAASIPLALDEA---VEEGKLKPGDLV 72 (90)
T ss_pred CCCCCCCHHHCCEEEECCCCHHHH-----HHHHHHHCCCHHHCEEHHHCCCCCCCCHHHHHHHHH---HHCCCCCCCCEE
T ss_conf 944049979999999788888999-----999998197913250324403776202399999999---981999999989
Q ss_pred EEEEE
Q ss_conf 16763
Q gi|254780497|r 136 MVIGS 140 (324)
Q Consensus 136 Lvv~~ 140 (324)
|+++.
T Consensus 73 ll~~~ 77 (90)
T pfam08541 73 LLVGF 77 (90)
T ss_pred EEEEE
T ss_conf 99987
No 174
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=92.45 E-value=0.47 Score=26.49 Aligned_cols=92 Identities=18% Similarity=0.268 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH--HHHCCCH---HHHHHHHHHHHHHCCCCCC
Q ss_conf 7778888987400100012102444441589999997197876733658--6519330---1269999999998068899
Q gi|254780497|r 228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTV--DIHGNTS---AASIPLALAVAVKEGRVKK 302 (324)
Q Consensus 228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~--~~~Gn~~---sas~~~~L~~~~~~g~l~~ 302 (324)
...++++|+++|++++|||.|=+|-+--...-.+.+.|++++||+..+- =-+||=. .+-+...|-+.+++ +.
T Consensus 285 v~A~~k~L~ragl~~~DiD~~EinEAFA~q~l~~~~~l~id~~kvN~~GGaiAlGHP~GatGarl~~tl~~~L~~---~~ 361 (384)
T PRK07661 285 IAAIPKALKLAGLELSDIGLFELNEAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKR---RN 361 (384)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---HC
T ss_conf 999999999869986677755650667888999999839988883998658874888034479999999999998---19
Q ss_pred CCEEEE-EEECCCCCEEEEEEE
Q ss_conf 989999-997145014568786
Q gi|254780497|r 303 GDCLLL-EAMGGGFTSGTVLLR 323 (324)
Q Consensus 303 Gd~vll-~~~G~G~s~~a~llr 323 (324)
+.+.+. ...|.|.-. +++++
T Consensus 362 ~~~Glas~C~ggG~g~-A~~iE 382 (384)
T PRK07661 362 EQFGIVTMCIGGGMGA-AGVFE 382 (384)
T ss_pred CCEEEEEECCCCCHHH-EEEEE
T ss_conf 9989999633205223-69999
No 175
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=92.40 E-value=0.38 Score=27.06 Aligned_cols=92 Identities=21% Similarity=0.302 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--HHHHCCCHHH---HHHHHHHHHHHCCCCCC
Q ss_conf 777888898740010001210244444158999999719787673365--8651933012---69999999998068899
Q gi|254780497|r 228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--VDIHGNTSAA---SIPLALAVAVKEGRVKK 302 (324)
Q Consensus 228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--~~~~Gn~~sa---s~~~~L~~~~~~g~l~~ 302 (324)
...++++|+++|++++|||.|=+|-+--...-...+.|++++||+..+ .--+||=..+ -+...|-+.++. +.
T Consensus 298 v~A~~k~l~~agl~~~Did~~EinEAFA~~~l~~~~~l~i~~~~vN~~GGaiA~GHP~GASGarl~~~l~~~L~~---~~ 374 (397)
T PRK06954 298 VGAIRKLFEKNGWRAAEVDLYEINEAFAVVTMAAMKEHGLPHEKVNVNGGACALGHPIGASGARILVTLIGALRK---RG 374 (397)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEEHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---HC
T ss_conf 999999999849996656523540577888999999809994647888638875888220089999999999998---19
Q ss_pred CCEEEEE-EECCCCCEEEEEEE
Q ss_conf 9899999-97145014568786
Q gi|254780497|r 303 GDCLLLE-AMGGGFTSGTVLLR 323 (324)
Q Consensus 303 Gd~vll~-~~G~G~s~~a~llr 323 (324)
|.+.+.. ..|.|.. .+++++
T Consensus 375 g~~gl~s~c~ggG~g-~A~~iE 395 (397)
T PRK06954 375 GKRGVASLCIGGGEA-TAMGIE 395 (397)
T ss_pred CCEEEEEECCCCCHH-HEEEEE
T ss_conf 988999975531440-469899
No 176
>TIGR02446 FadI acetyl-CoA C-acyltransferase FadI; InterPro: IPR012806 This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (2.3.1.16 from EC) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (IPR012802 from INTERPRO). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in Escherichia coli.; GO: 0008415 acyltransferase activity, 0016740 transferase activity, 0006631 fatty acid metabolic process, 0016042 lipid catabolic process.
Probab=91.88 E-value=0.13 Score=30.02 Aligned_cols=94 Identities=19% Similarity=0.299 Sum_probs=68.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHH-HHHHHH
Q ss_conf 9889999999999999974021235443366501223345898531001122026-86444421012200346-788899
Q gi|254780497|r 48 KDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYA-VTTADS 125 (324)
Q Consensus 48 ~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~a-l~~A~~ 125 (324)
.+-...||....+.++|.|+.++|+=|+.++|+....--..|..|..|.=--|+. +.-+|.+.-+|+...++ ..+|.+
T Consensus 27 ~~~~a~dlGkmvv~~ll~r~~~~~~~ieq~v~GqvvqmP~aPniareivlGtGm~~~tdaysv~raCatsfq~~~nvaes 106 (430)
T TIGR02446 27 HGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVTRACATSFQSAVNVAES 106 (430)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEECCCCCCHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 05641344578898777521677789777661001315776402334210267300012024456777778889988877
Q ss_pred HHHHCCCCCCEEEEECC
Q ss_conf 89641556531676302
Q gi|254780497|r 126 YIRSGVVRRVMVIGSDT 142 (324)
Q Consensus 126 li~~g~~~~~Lvv~~e~ 142 (324)
++ +|.++-.+.-++|.
T Consensus 107 ~m-~G~i~~GiaGGads 122 (430)
T TIGR02446 107 IM-AGAIEIGIAGGADS 122 (430)
T ss_pred HH-HCCEEEEEECCCCC
T ss_conf 75-15301311046654
No 177
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=91.87 E-value=0.63 Score=25.69 Aligned_cols=19 Identities=0% Similarity=-0.235 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHCCCCC
Q ss_conf 7777788889874001000
Q gi|254780497|r 226 KAVELIEKVFDSTHLTIEN 244 (324)
Q Consensus 226 ~~~~~i~~~L~~~gl~~~d 244 (324)
.++-.....++..|+.+++
T Consensus 279 aFa~~~l~~~e~lGl~~~g 297 (375)
T cd00829 279 CFTIAELLALEDLGFCEKG 297 (375)
T ss_pred CCHHHHHHHHHHCCCCCCC
T ss_conf 7669999999980999777
No 178
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=91.87 E-value=0.64 Score=25.63 Aligned_cols=12 Identities=8% Similarity=0.321 Sum_probs=4.8
Q ss_pred HHHHHCCCCHHH
Q ss_conf 999971978767
Q gi|254780497|r 260 SIVDKMKIPFDK 271 (324)
Q Consensus 260 ~~~~~lgl~~e~ 271 (324)
.+.++.++.++.
T Consensus 231 ~~L~~~~l~~~d 242 (323)
T COG0332 231 EVLEKAGLTPED 242 (323)
T ss_pred HHHHHCCCCHHH
T ss_conf 999984999889
No 179
>PRK06689 consensus
Probab=91.79 E-value=0.38 Score=27.11 Aligned_cols=93 Identities=17% Similarity=0.192 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH--HHHCCCH---HHHHHHHHHHHHHCCCCC
Q ss_conf 77778888987400100012102444441589999997197876733658--6519330---126999999999806889
Q gi|254780497|r 227 AVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTV--DIHGNTS---AASIPLALAVAVKEGRVK 301 (324)
Q Consensus 227 ~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~--~~~Gn~~---sas~~~~L~~~~~~g~l~ 301 (324)
-...++++|+++|++++|||.|=+|-+-....-.+.+.|++++||+..+- =-+||=. .+-+...|-+.++. +
T Consensus 291 Pv~A~~k~L~ragl~~~Did~~EinEAFA~q~l~~~~~lgid~~kvN~~GGaiAlGHP~GaTGarl~~~l~~~L~~---~ 367 (391)
T PRK06689 291 PAPAIRKGLEKVDWSLEDADLLEINEAFAAQYLAVEKELGLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELKR---R 367 (391)
T ss_pred HHHHHHHHHHHCCCCHHHCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---H
T ss_conf 9999999999859986458889961566889999999858979888998668874888121479999999999998---0
Q ss_pred CCCEEEE-EEECCCCCEEEEEEE
Q ss_conf 9989999-997145014568786
Q gi|254780497|r 302 KGDCLLL-EAMGGGFTSGTVLLR 323 (324)
Q Consensus 302 ~Gd~vll-~~~G~G~s~~a~llr 323 (324)
.+.+.+. ...|.|.- .+++++
T Consensus 368 ~~~~gl~t~C~ggG~G-~A~~iE 389 (391)
T PRK06689 368 GLEKGIASLCVGGGIG-VALFIE 389 (391)
T ss_pred CCCEEEEEECCCCCHH-HEEEEE
T ss_conf 9998999964302321-516686
No 180
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=91.69 E-value=0.71 Score=25.37 Aligned_cols=43 Identities=16% Similarity=0.191 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH
Q ss_conf 7778888987400100012102444441589999997197876
Q gi|254780497|r 228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFD 270 (324)
Q Consensus 228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e 270 (324)
...++++|+++|++++|||.+=+|-+--..--...+.||+.++
T Consensus 272 ~~A~~~al~~aGl~~~Did~~Ei~eaFa~~~l~~~e~lg~~~~ 314 (393)
T cd00826 272 IEAARKALEKAGLGIGDLDLIEAHDAFAANACATNEALGLCPE 314 (393)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCC
T ss_conf 9999999998299800166456324234999999998098912
No 181
>PRK07025 consensus
Probab=91.09 E-value=0.3 Score=27.78 Aligned_cols=92 Identities=18% Similarity=0.217 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--HHHHCCCHHHH---HHHHHHHHHHCCCCCC
Q ss_conf 777888898740010001210244444158999999719787673365--86519330126---9999999998068899
Q gi|254780497|r 228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--VDIHGNTSAAS---IPLALAVAVKEGRVKK 302 (324)
Q Consensus 228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--~~~~Gn~~sas---~~~~L~~~~~~g~l~~ 302 (324)
...++++|+++|++++|||.|=+|-+--...-...+.||++++|+..+ .--+||=..++ +...|-+.++. +.
T Consensus 294 v~A~~k~l~~agl~~~Did~~EinEAFA~~~l~~~~~lg~d~~~vN~~GGaiA~GHP~GATGar~~~~l~~~L~~---~~ 370 (393)
T PRK07025 294 VPASRRCLERAGWTVGDLDLMEINEAFAAQALAVHKQMGWDTSKVNVNGGAIAIGHPIGASGCRILVTLLHEMQK---RD 370 (393)
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---CC
T ss_conf 999999999859983346602013677888999999848994657988548872898031289999999999987---39
Q ss_pred CCEEEEE-EECCCCCEEEEEEE
Q ss_conf 9899999-97145014568786
Q gi|254780497|r 303 GDCLLLE-AMGGGFTSGTVLLR 323 (324)
Q Consensus 303 Gd~vll~-~~G~G~s~~a~llr 323 (324)
|.+.+.. ..|.|. -.+++++
T Consensus 371 ~~~gl~~~C~ggG~-g~A~~iE 391 (393)
T PRK07025 371 AKRGLASLCIGGGM-GVALAVE 391 (393)
T ss_pred CCEEEEEECCCCCE-EEEEEEE
T ss_conf 98899997332320-2799996
No 182
>PRK06158 thiolase; Provisional
Probab=90.50 E-value=0.24 Score=28.39 Aligned_cols=13 Identities=15% Similarity=0.238 Sum_probs=8.8
Q ss_pred EEEEEEEEEECCCC
Q ss_conf 26999999964984
Q gi|254780497|r 3 RSTVRGIGLSLPRR 16 (324)
Q Consensus 3 ~~~I~~~g~ylP~~ 16 (324)
+|.|.|+|.. |-.
T Consensus 9 rvAIvGvG~t-~fg 21 (384)
T PRK06158 9 RTAIVGAATA-GLG 21 (384)
T ss_pred CEEEEEEEEC-CCC
T ss_conf 3899975551-350
No 183
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=90.37 E-value=0.8 Score=25.02 Aligned_cols=13 Identities=38% Similarity=0.358 Sum_probs=8.4
Q ss_pred EEEEEEEEEECCC
Q ss_conf 2699999996498
Q gi|254780497|r 3 RSTVRGIGLSLPR 15 (324)
Q Consensus 3 ~~~I~~~g~ylP~ 15 (324)
+|.|.|+|..=..
T Consensus 2 ~vaIvG~g~t~~g 14 (385)
T PRK12578 2 RVAVIGVGNSKFG 14 (385)
T ss_pred CEEEEEEEEEECC
T ss_conf 6999997662241
No 184
>PRK09051 beta-ketothiolase; Provisional
Probab=90.31 E-value=0.52 Score=26.20 Aligned_cols=92 Identities=17% Similarity=0.224 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--HHHHCCCHH---HHHHHHHHHHHHCCCCC
Q ss_conf 7777888898740010001210244444158999999719787673365--865193301---26999999999806889
Q gi|254780497|r 227 AVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--VDIHGNTSA---ASIPLALAVAVKEGRVK 301 (324)
Q Consensus 227 ~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--~~~~Gn~~s---as~~~~L~~~~~~g~l~ 301 (324)
-...++++|+++|++++|||.|=+|-+--...-...+.|++++||+..+ .=-+||=.. +-+.+.|-+.++. +
T Consensus 294 p~~A~~~~L~ragl~~~Did~~EinEAFA~q~l~~~~~l~~d~~kvN~~GGaiAlGHP~GaTGar~~~~l~~~L~~---~ 370 (394)
T PRK09051 294 PVPATQKALERAGLTVDDLDVIEANEAFAAQACAVTRELGLDPAKVNPNGSGISLGHPVGATGAIITVKALYELQR---I 370 (394)
T ss_pred HHHHHHHHHHHCCCCHHHCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH---C
T ss_conf 9999999999839987779888851465999999998709987874998658863988023489999999999987---1
Q ss_pred CCCEEEE-EEECCCCCEEEEE
Q ss_conf 9989999-9971450145687
Q gi|254780497|r 302 KGDCLLL-EAMGGGFTSGTVL 321 (324)
Q Consensus 302 ~Gd~vll-~~~G~G~s~~a~l 321 (324)
.|.+.+. ...|.|.-...++
T Consensus 371 ~~~~Gl~t~C~ggG~g~A~li 391 (394)
T PRK09051 371 GGRYALVTMCIGGGQGIAAIF 391 (394)
T ss_pred CCCEEEEEECCCCCCEEEEEE
T ss_conf 999899997442250768999
No 185
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=89.63 E-value=0.62 Score=25.72 Aligned_cols=90 Identities=22% Similarity=0.206 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCC---CHHHHHHH--HHHHCC----CHHHHHHHHHHHHHHCC
Q ss_conf 7778888987400100012102444441589999997197---87673365--865193----30126999999999806
Q gi|254780497|r 228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKI---PFDKVIVT--VDIHGN----TSAASIPLALAVAVKEG 298 (324)
Q Consensus 228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl---~~e~~~~~--~~~~Gn----~~sas~~~~L~~~~~~g 298 (324)
...++++|+++||+++|||.|=+|-+--...-...+.||+ ++||+..+ .--+|| +| +-+.+.|-+.++.
T Consensus 285 ~~A~~~~L~~agl~~~Did~~EinEAFA~q~l~~~~~lg~~~~~~~kvN~~GGaiA~GHP~GATG-arl~~~l~~~L~~- 362 (387)
T PRK08947 285 VPATQKALKRAGLSIADIDVFELNEAFAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSG-ARISTTLLNLMER- 362 (387)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCH-HHHHHHHHHHHHH-
T ss_conf 99999999984998655784221256687799999985998898335789965887388811028-9999999999998-
Q ss_pred CCCCCCEEE-EEEECCCCCEEEEE
Q ss_conf 889998999-99971450145687
Q gi|254780497|r 299 RVKKGDCLL-LEAMGGGFTSGTVL 321 (324)
Q Consensus 299 ~l~~Gd~vl-l~~~G~G~s~~a~l 321 (324)
+.+.+.+ -...|.|.-...++
T Consensus 363 --~~~~~gl~s~c~ggG~g~A~~i 384 (387)
T PRK08947 363 --KDAQFGLATMCIGLGQGIATVF 384 (387)
T ss_pred --HCCCEEEEEECCCCCCEEEEEE
T ss_conf --1999999996232141307999
No 186
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=89.58 E-value=0.75 Score=25.18 Aligned_cols=23 Identities=13% Similarity=0.254 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 77888898740010001210244
Q gi|254780497|r 229 ELIEKVFDSTHLTIENIDWFVPH 251 (324)
Q Consensus 229 ~~i~~~L~~~gl~~~did~~~~H 251 (324)
.+++.+.++.++.++.+-.++++
T Consensus 273 riie~i~k~Lgl~~ek~~~~~~~ 295 (353)
T PRK12880 273 YLVDCIKEELKLNDDKVPNFIME 295 (353)
T ss_pred HHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 99999999809897870300555
No 187
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=89.27 E-value=0.63 Score=25.67 Aligned_cols=96 Identities=20% Similarity=0.179 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH--HHHHCCCHHHHHHHHHHHHHHCCCCCCCCE
Q ss_conf 777888898740010001210244444158999999719787673365--865193301269999999998068899989
Q gi|254780497|r 228 VELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVT--VDIHGNTSAASIPLALAVAVKEGRVKKGDC 305 (324)
Q Consensus 228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~--~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~ 305 (324)
...++++|+++|++++|||.+=+|-+--..--...+.||++++++... +--+||=..++=...+.+++.+-+-+.|.+
T Consensus 288 ~~A~~~al~~agl~~~Did~~EiheaFa~~~l~~~~~lg~~~~~vN~~GG~ia~GHP~GATG~~~~~~l~~~L~~~~g~~ 367 (386)
T cd00751 288 VPAIPKALKRAGLTLDDIDLIEINEAFAAQALACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHELKRRGGRY 367 (386)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCE
T ss_conf 99999999983998444884351056687899999982987766788855986099802158999999999998838988
Q ss_pred EEEEEECCCCCEEEEEEE
Q ss_conf 999997145014568786
Q gi|254780497|r 306 LLLEAMGGGFTSGTVLLR 323 (324)
Q Consensus 306 vll~~~G~G~s~~a~llr 323 (324)
.+...-++|=.-.+++++
T Consensus 368 gl~s~c~~gG~g~a~~ie 385 (386)
T cd00751 368 GLATMCIGGGQGAAMVIE 385 (386)
T ss_pred EEEEECCCCCEEEEEEEE
T ss_conf 999973345506799997
No 188
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=89.05 E-value=0.71 Score=25.35 Aligned_cols=84 Identities=14% Similarity=0.122 Sum_probs=32.2
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCHH-HHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf 88889874001000121024444415-89999997197876733658651933012699999999980688999899999
Q gi|254780497|r 231 IEKVFDSTHLTIENIDWFVPHQANWR-IINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKKGDCLLLE 309 (324)
Q Consensus 231 i~~~L~~~gl~~~did~~~~Hq~~~~-~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~vll~ 309 (324)
+.+++...++...-++-.+-|-..-. +.+.+.-.|-+....++- .-|+-..++-+.|+......+-.+-.+++.-
T Consensus 311 i~~~fg~~~~pv~S~K~~iGH~~~AaG~~~~i~~ll~l~~g~ipp----t~n~~~~~p~~~l~~v~~~~~~~~~~~al~n 386 (399)
T cd00832 311 LAAVFGPRGVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIPP----TVNVTDVPPAYGLDLVTGRPRPAALRTALVL 386 (399)
T ss_pred HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 999966999878995422110699999999999999983596198----9998999988885237899878998999994
Q ss_pred EEC-CCCCEE
Q ss_conf 971-450145
Q gi|254780497|r 310 AMG-GGFTSG 318 (324)
Q Consensus 310 ~~G-~G~s~~ 318 (324)
+|| .|....
T Consensus 387 sfGfGG~Na~ 396 (399)
T cd00832 387 ARGRGGFNSA 396 (399)
T ss_pred CCCCCCEEEE
T ss_conf 4056803268
No 189
>PRK08371 consensus
Probab=88.20 E-value=0.27 Score=28.08 Aligned_cols=19 Identities=16% Similarity=0.212 Sum_probs=8.4
Q ss_pred HHHHHHHHHCCCCCCCCEE
Q ss_conf 9999997402123544336
Q gi|254780497|r 59 AARDALHHAEMSVDDIDLI 77 (324)
Q Consensus 59 Aa~~al~~a~~~~~~Id~i 77 (324)
.+++-+++.|++.+|++.+
T Consensus 148 ~a~~~~~~yg~t~e~~a~v 166 (388)
T PRK08371 148 IMRLYMNTYGYTEEDLALF 166 (388)
T ss_pred HHHHHHHHHCCCHHHHHHH
T ss_conf 9999999958998883799
No 190
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=87.53 E-value=0.26 Score=28.14 Aligned_cols=91 Identities=20% Similarity=0.239 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHHH----HH------HHHHHCCC-------CHHHHHHHH--HHHCCCH---HH
Q ss_conf 777888898740010001210244444158----99------99997197-------876733658--6519330---12
Q gi|254780497|r 228 VELIEKVFDSTHLTIENIDWFVPHQANWRI----IN------SIVDKMKI-------PFDKVIVTV--DIHGNTS---AA 285 (324)
Q Consensus 228 ~~~i~~~L~~~gl~~~did~~~~Hq~~~~~----~~------~~~~~lgl-------~~e~~~~~~--~~~Gn~~---sa 285 (324)
...++++|+++||+++|||.|=+|-+--.. ++ ...+.||+ ++||+..+- =-+||=. .+
T Consensus 313 v~A~~~~L~ragl~~~Did~~EinEAFAaq~la~~~~~~~~~~~~~~lgl~~~~~~id~~kvN~~GGaiAlGHP~GaSGa 392 (428)
T PRK09268 313 TYAVPRLLARNGLTLQDFDFYEIHEAFASQVLATLKAWESEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGG 392 (428)
T ss_pred HHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHCCCCCCCHH
T ss_conf 99999999985999798479987466788999998864004667886276532356877654888538874888033489
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEE-EEECCCCCEEEEEE
Q ss_conf 69999999998068899989999-99714501456878
Q gi|254780497|r 286 SIPLALAVAVKEGRVKKGDCLLL-EAMGGGFTSGTVLL 322 (324)
Q Consensus 286 s~~~~L~~~~~~g~l~~Gd~vll-~~~G~G~s~~a~ll 322 (324)
=+.+.|.+.++. +.+.+.+. ...|.|.-. ++++
T Consensus 393 riv~~l~~~L~~---~~~~~Glat~C~gGG~g~-A~li 426 (428)
T PRK09268 393 RIVATLAKLLAE---KGSGRGLISICAAGGQGV-TAIL 426 (428)
T ss_pred HHHHHHHHHHHH---HCCCEEEEEECCCCCEEE-EEEE
T ss_conf 999999999998---399989998723134077-9999
No 191
>PRK08256 lipid-transfer protein; Provisional
Probab=87.46 E-value=0.38 Score=27.11 Aligned_cols=34 Identities=15% Similarity=0.238 Sum_probs=17.4
Q ss_pred CEEEEEEEEEEC---CCCEECHHHHHH--------HHCCCHHHHH
Q ss_conf 226999999964---984117889998--------8099987811
Q gi|254780497|r 2 IRSTVRGIGLSL---PRRVLSNSDLES--------IVDTSDGWIK 35 (324)
Q Consensus 2 ~~~~I~~~g~yl---P~~~v~~~el~~--------~~~~~~~~i~ 35 (324)
|+|.|.|+|.-- |..-.+..+|.. ..+++++.|.
T Consensus 1 nkV~IvGvg~T~f~k~~~~~~~~~L~~eA~~~AL~dAGi~~~~ID 45 (391)
T PRK08256 1 NKVFVAGVGMTPFEKPGASWDYPDMAAEAGRAALADAGIDYDEVQ 45 (391)
T ss_pred CEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCC
T ss_conf 909999742045368999999999999999999998298989989
No 192
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=87.18 E-value=0.51 Score=26.26 Aligned_cols=20 Identities=30% Similarity=0.363 Sum_probs=12.1
Q ss_pred EEEEEEEEEECCCCEE---CHHHH
Q ss_conf 2699999996498411---78899
Q gi|254780497|r 3 RSTVRGIGLSLPRRVL---SNSDL 23 (324)
Q Consensus 3 ~~~I~~~g~ylP~~~v---~~~el 23 (324)
+|.|.|+|. .|-.+. +..||
T Consensus 11 ~VaIvG~G~-T~f~r~~~~s~~eL 33 (393)
T PRK06065 11 RVAVIGAGM-TLFRRRMLETPQEL 33 (393)
T ss_pred CEEEEEEEE-ECCCCCCCCCHHHH
T ss_conf 889998657-01267899999999
No 193
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=86.97 E-value=1.7 Score=22.97 Aligned_cols=31 Identities=13% Similarity=0.113 Sum_probs=15.0
Q ss_pred CCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHH
Q ss_conf 8985310011220268-6444421012200346
Q gi|254780497|r 88 FPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYA 119 (324)
Q Consensus 88 ~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~a 119 (324)
.|..-+++.+.|.+++ ..+++|.+| +|+..|
T Consensus 57 ~P~~~a~ml~~L~~~~~~~VLeIGtG-sGY~tA 88 (205)
T PRK13944 57 APHMVAMMCELIEPRPGMKILEVGTG-SGYQAA 88 (205)
T ss_pred HHHHHHHHHHHHCCCCCCEEEEECCC-CCHHHH
T ss_conf 79999999997068999989997898-519999
No 194
>pfam01135 PCMT Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT).
Probab=85.94 E-value=2 Score=22.44 Aligned_cols=25 Identities=12% Similarity=0.094 Sum_probs=11.8
Q ss_pred CCCCCCCHHHHHHCCC-CCCCCCCCC
Q ss_conf 8985310011220268-644442101
Q gi|254780497|r 88 FPSTAVNIQNRLGMKR-GFAFDMQAV 112 (324)
Q Consensus 88 ~p~~a~~i~~~LGl~~-~~~~di~~~ 112 (324)
.|.+.+++.+.|.+++ ..+++|.+|
T Consensus 58 ~P~~~a~ml~~L~l~~g~~VLeIGtG 83 (205)
T pfam01135 58 APHMHAMMLELLELKPGMRVLEIGSG 83 (205)
T ss_pred HHHHHHHHHHHCCCCCCCEEEEECCC
T ss_conf 38999999997078999989996699
No 195
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=85.88 E-value=2.1 Score=22.38 Aligned_cols=32 Identities=16% Similarity=0.139 Sum_probs=15.8
Q ss_pred CCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHH
Q ss_conf 8985310011220268-64444210122003467
Q gi|254780497|r 88 FPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAV 120 (324)
Q Consensus 88 ~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al 120 (324)
.|...+++.+.|.+++ ..+++|.+| +|+..|+
T Consensus 61 ~P~~~a~ml~~L~l~~~~~VLeIGtG-sGY~tAl 93 (214)
T PRK13942 61 AIHMVAIMCELLDLDEGQKVLEIGTG-SGYHAAV 93 (214)
T ss_pred HHHHHHHHHHHHCCCCCCEEEEECCC-CCHHHHH
T ss_conf 49999999997279999979996799-5299999
No 196
>TIGR02470 sucr_synth sucrose synthase; InterPro: IPR012820 This entry represents sucrose synthase an enzyme that despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyses the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.; GO: 0016157 sucrose synthase activity.
Probab=85.78 E-value=0.42 Score=26.83 Aligned_cols=124 Identities=19% Similarity=0.210 Sum_probs=84.8
Q ss_pred EEEEEEEECCCC--EECHHHHHHHHCCCHHHHHH-----CCCCCEEEEECCCC---CHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 999999964984--11788999880999878110-----24751889828988---999999999999997402123544
Q gi|254780497|r 5 TVRGIGLSLPRR--VLSNSDLESIVDTSDGWIKR-----RVGISRRHIAGKDE---TTASLGEAAARDALHHAEMSVDDI 74 (324)
Q Consensus 5 ~I~~~g~ylP~~--~v~~~el~~~~~~~~~~i~~-----~~GI~~R~~~~~~e---~~~~la~~Aa~~al~~a~~~~~~I 74 (324)
+|.=+=-=+|+- .-.|+.||+..|....||.+ ..|+-.|.|...=| ..-+-|..|.++++..-+-.|
T Consensus 316 kIlIvTRLiPdA~GT~CnqRLEKv~Gt~~~~ILRVPFr~~nG~~~~~WISRFeiWPYLE~FA~D~~~e~~~el~g~P--- 392 (790)
T TIGR02470 316 KILIVTRLIPDAEGTTCNQRLEKVSGTEHAHILRVPFRTENGIILRKWISRFEIWPYLETFAEDAEKEILAELQGKP--- 392 (790)
T ss_pred EEEEEECCCCCCCCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC---
T ss_conf 28998501768988605724520127985316421664347730036633012472045668999999999846899---
Q ss_pred CEEEEECCCCCCCCCCCCCCHHHHHHCCCCC-----------CCCCCC--CCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf 3366501223345898531001122026864-----------444210--122003467888998964155653
Q gi|254780497|r 75 DLIIVATSTPDQTFPSTAVNIQNRLGMKRGF-----------AFDMQA--VCSGFVYAVTTADSYIRSGVVRRV 135 (324)
Q Consensus 75 d~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~-----------~~di~~--~C~~~~~al~~A~~li~~g~~~~~ 135 (324)
|+||-. -|-.++ .|+.++++||.++|. -=||.. .=.=.-..+|--++||+.+..+-+
T Consensus 393 DLIIGN-YSDGNL---VA~LLA~kLgVTQC~IAHALEKtKY~~Sd~yW~~~e~kYHFS~QFTADLIAMN~aDFI 462 (790)
T TIGR02470 393 DLIIGN-YSDGNL---VASLLARKLGVTQCTIAHALEKTKYPDSDIYWQELEDKYHFSCQFTADLIAMNAADFI 462 (790)
T ss_pred CEEEEC-CCCHHH---HHHHHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCE
T ss_conf 706732-563589---9999985336222203331334367664540420257656430578999964158965
No 197
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase; InterPro: IPR012793 Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.; GO: 0016747 transferase activity transferring groups other than amino-acyl groups, 0019619 protocatechuate catabolic process.
Probab=84.84 E-value=0.75 Score=25.20 Aligned_cols=95 Identities=17% Similarity=0.245 Sum_probs=64.6
Q ss_pred CHHHHHHHHHHHHHHHH-CCCCCCCCEEEEECCCCCCCCCCCCCCHHHHH-HCCCC-CCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 99999999999999740-21235443366501223345898531001122-02686-44442101220034678889989
Q gi|254780497|r 51 TTASLGEAAARDALHHA-EMSVDDIDLIIVATSTPDQTFPSTAVNIQNRL-GMKRG-FAFDMQAVCSGFVYAVTTADSYI 127 (324)
Q Consensus 51 ~~~~la~~Aa~~al~~a-~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~L-Gl~~~-~~~di~~~C~~~~~al~~A~~li 127 (324)
..-||++--.+.++.+. .++...||-|++++...---.--..+++...| |++.. ....++--|.+.+.++..+..-|
T Consensus 24 rad~l~a~P~~~l~~~~~~~~~~~~d~v~~G~anqaGednrnvarm~~llaGlP~~v~~~t~nrlC~s~lda~~~~~ra~ 103 (400)
T TIGR02430 24 RADDLAAVPIKALLARNPSLDAAAIDDVILGCANQAGEDNRNVARMAALLAGLPVSVPGTTVNRLCGSGLDAIGLAARAI 103 (400)
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 10002233699998532202656531443123211351035799999997068641101456665421378999988876
Q ss_pred HHCCCCCCEEEEECCCCC
Q ss_conf 641556531676302243
Q gi|254780497|r 128 RSGVVRRVMVIGSDTFSR 145 (324)
Q Consensus 128 ~~g~~~~~Lvv~~e~~S~ 145 (324)
++|..+-++.-+.|.+|+
T Consensus 104 ~~G~~~l~iaGGvesmsr 121 (400)
T TIGR02430 104 KAGEADLVIAGGVESMSR 121 (400)
T ss_pred HCCCCCEEEECCCHHHCC
T ss_conf 327643577647211203
No 198
>TIGR02482 PFKA_ATP 6-phosphofructokinase; InterPro: IPR012828 6-phosphofructokinase (2.7.1.11 from EC) catalyses the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This entry contains bacterial ATP-dependent 6-phosphofructokinases, which lack a beta-hairpin loop present in IPR012829 from INTERPRO family members. IPR012829 from INTERPRO contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. IPR011183 from INTERPRO represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (2.7.1.90 from EC).; GO: 0003872 6-phosphofructokinase activity, 0005524 ATP binding, 0006002 fructose 6-phosphate metabolic process, 0006096 glycolysis.
Probab=84.83 E-value=2.1 Score=22.39 Aligned_cols=13 Identities=8% Similarity=0.174 Sum_probs=7.3
Q ss_pred CCCCCCEEEEEEE
Q ss_conf 8899989999997
Q gi|254780497|r 299 RVKKGDCLLLEAM 311 (324)
Q Consensus 299 ~l~~Gd~vll~~~ 311 (324)
.|.+|+..+|+++
T Consensus 276 ~L~~g~~gvmig~ 288 (302)
T TIGR02482 276 LLLEGKSGVMIGL 288 (302)
T ss_pred HHHCCCCCEEEEE
T ss_conf 9863982036885
No 199
>pfam03377 Avirulence Xanthomonas avirulence protein, Avr/PthA.
Probab=84.20 E-value=3.3 Score=21.13 Aligned_cols=45 Identities=11% Similarity=0.209 Sum_probs=29.2
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHC-------CCCHHHHHHHHH
Q ss_conf 889874001000121024444415899999971-------978767336586
Q gi|254780497|r 233 KVFDSTHLTIENIDWFVPHQANWRIINSIVDKM-------KIPFDKVIVTVD 277 (324)
Q Consensus 233 ~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~l-------gl~~e~~~~~~~ 277 (324)
..+...|++++||-.+.-|-+++..++.+.+.+ +++++++...-.
T Consensus 203 ~l~~~~gL~~~qVVaIASh~GgkqALe~v~~~l~~L~~~~~Ls~~qvvaiAs 254 (289)
T pfam03377 203 VLCQAHGLTPDQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPDQVVAIAS 254 (289)
T ss_pred HHHHHCCCCHHHEEHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEHHH
T ss_conf 9875149998891100216872789999998868765350289878420022
No 200
>COG0013 AlaS Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=83.28 E-value=1.5 Score=23.27 Aligned_cols=13 Identities=31% Similarity=0.465 Sum_probs=6.6
Q ss_pred CCCCEEEEEEECC
Q ss_conf 9998999999714
Q gi|254780497|r 301 KKGDCLLLEAMGG 313 (324)
Q Consensus 301 ~~Gd~vll~~~G~ 313 (324)
+.|+.|=.+.+|.
T Consensus 651 kY~~~VRVV~ig~ 663 (879)
T COG0013 651 KYGDEVRVVEIGD 663 (879)
T ss_pred CCCCEEEEEEECC
T ss_conf 6798689999899
No 201
>PRK13410 molecular chaperone DnaK; Provisional
Probab=82.48 E-value=2.2 Score=22.17 Aligned_cols=46 Identities=13% Similarity=0.114 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH---HHHHHHHHCCCC
Q ss_conf 5777777788889874001000121024444415---899999971978
Q gi|254780497|r 223 AVEKAVELIEKVFDSTHLTIENIDWFVPHQANWR---IINSIVDKMKIP 268 (324)
Q Consensus 223 ~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~---~~~~~~~~lgl~ 268 (324)
.+....+.++++|+.++++++|||.+++-=++-+ +.+.+.+.+|-.
T Consensus 307 L~~Rt~~pv~~aL~dAgl~~~dId~VILVGGSTRIP~Vq~~V~e~FGke 355 (719)
T PRK13410 307 LVSRLRRPVKRALKDAGLSPVQIDEVVLVGGSTRMPMVKQLVRSLIDRE 355 (719)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 9999999999999983899414139999788255488999999984999
No 202
>PRK08197 threonine synthase; Validated
Probab=79.51 E-value=4.8 Score=20.05 Aligned_cols=64 Identities=14% Similarity=0.243 Sum_probs=44.8
Q ss_pred HHHHHHHHHC----CCCHHHHHHH---HHH-HC---CCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEE
Q ss_conf 5899999971----9787673365---865-19---330126999999999806889998999999714501456
Q gi|254780497|r 256 RIINSIVDKM----KIPFDKVIVT---VDI-HG---NTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFTSGT 319 (324)
Q Consensus 256 ~~~~~~~~~l----gl~~e~~~~~---~~~-~G---n~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~a 319 (324)
.+++.+.+.= -++.+.+..- +.+ -| -..|+..+.++.++.++|.++++++|+++-.|.|+..--
T Consensus 310 ~~l~av~~s~G~~v~VsD~Ei~~A~~~La~~eGi~~EpasA~alAgl~kl~e~G~i~~~~~VV~~lTG~GlKd~d 384 (402)
T PRK08197 310 LVLDAVRESGGCAIAVDDEAILAALSELAREEGLFACPEGAAALAAAKQLRESGWLKSGERVVLFNTGTGLKYPD 384 (402)
T ss_pred HHHHHHHHHCCEEEEECHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHH
T ss_conf 999999986998999899999999999998559277736999999999999829999999699990888667777
No 203
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=79.42 E-value=3.6 Score=20.84 Aligned_cols=50 Identities=16% Similarity=0.202 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH---HHHHHHHHCCCCHHH
Q ss_conf 55777777788889874001000121024444415---899999971978767
Q gi|254780497|r 222 YAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWR---IINSIVDKMKIPFDK 271 (324)
Q Consensus 222 ~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~---~~~~~~~~lgl~~e~ 271 (324)
.........++++|++++++++|||.+++-=++-+ +.+.+.+.+|-++.+
T Consensus 306 ~l~~r~~~~v~~aL~~A~l~~~dId~ViLVGGsTRiP~Vq~~v~~~Fgk~~~~ 358 (631)
T PRK00290 306 DLVERTIEPCRQALKDAGLSVSDIDEVILVGGSTRMPAVQELVKEFFGKEPNK 358 (631)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 99999999999999980898222159999178245679999999996889777
No 204
>cd01451 vWA_Magnesium_chelatase Magnesium chelatase: Mg-chelatase catalyses the insertion of Mg into protoporphyrin IX (Proto). In chlorophyll biosynthesis, insertion of Mg2+ into protoporphyrin IX is catalysed by magnesium chelatase in an ATP-dependent reaction. Magnesium chelatase is a three sub-unit (BchI, BchD and BchH) enzyme with a novel arrangement of domains: the C-terminal helical domain is located behind the nucleotide binding site. The BchD domain contains a AAA domain at its N-terminus and a VWA domain at its C-terminus. The VWA domain has been speculated to be involved in mediating protein-protein interactions.
Probab=79.11 E-value=4.9 Score=19.97 Aligned_cols=73 Identities=16% Similarity=0.176 Sum_probs=46.8
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCC--HHHHHHCCCCCCCCCC-CCCCCHHHHHHHHHHH
Q ss_conf 899999999999999740212354433665012233458985310--0112202686444421-0122003467888998
Q gi|254780497|r 50 ETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVN--IQNRLGMKRGFAFDMQ-AVCSGFVYAVTTADSY 126 (324)
Q Consensus 50 e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~--i~~~LGl~~~~~~di~-~~C~~~~~al~~A~~l 126 (324)
+...+.+..|+..+|.++-...+.|.+|.|.....+...|++-.. +.+.| .. +. +|+...-.+|..|..+
T Consensus 16 ~~rl~~aK~a~~~ll~d~~~~~D~v~lv~F~g~~a~~~lppT~~~~~~~~~l--~~-----L~~gG~T~l~~gL~~a~~~ 88 (178)
T cd01451 16 RHRMAAAKGAVLSLLRDAYQRRDKVALIAFRGTEAEVLLPPTRSVELAKRRL--AR-----LPTGGGTPLAAGLLAAYEL 88 (178)
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEECCCCCCHHHHHHHH--HC-----CCCCCCCCHHHHHHHHHHH
T ss_conf 5679999999999999743467889999975975558568876579999987--21-----6788985199999999999
Q ss_pred HHH
Q ss_conf 964
Q gi|254780497|r 127 IRS 129 (324)
Q Consensus 127 i~~ 129 (324)
++.
T Consensus 89 ~~~ 91 (178)
T cd01451 89 AAE 91 (178)
T ss_pred HHH
T ss_conf 998
No 205
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=77.16 E-value=2.4 Score=21.97 Aligned_cols=33 Identities=24% Similarity=0.375 Sum_probs=18.0
Q ss_pred CCCCCCCCHHHHHHCCCC-CCCCCCCCCCCHHHHH
Q ss_conf 589853100112202686-4444210122003467
Q gi|254780497|r 87 TFPSTAVNIQNRLGMKRG-FAFDMQAVCSGFVYAV 120 (324)
Q Consensus 87 ~~p~~a~~i~~~LGl~~~-~~~di~~~C~~~~~al 120 (324)
..|.+.+++.+.|.+++. .+++|.+| +|+..|+
T Consensus 62 s~P~~~A~ml~~L~l~~~~~VLeIGtG-sGY~tAl 95 (213)
T PRK00312 62 SQPYMVARMTELLELKPGDRVLEIGTG-SGYQAAV 95 (213)
T ss_pred CHHHHHHHHHHHHCCCCCCEEEEECCC-CCHHHHH
T ss_conf 679999999998436899759996598-6099999
No 206
>pfam01295 Adenylate_cycl Adenylate cyclase, class-I.
Probab=76.83 E-value=3 Score=21.32 Aligned_cols=29 Identities=14% Similarity=0.156 Sum_probs=12.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCE
Q ss_conf 898899999999999999740212354433
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDL 76 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ 76 (324)
...-++-||.+- .||+-..--..|..|++
T Consensus 413 ~~si~~~Di~iL-~RKLyaAFE~~pGKV~~ 441 (830)
T pfam01295 413 SESISPQDIGIL-TRKLYTAFEELPGKVTL 441 (830)
T ss_pred CCCCCHHHHHHH-HHHHHHHHHCCCCCEEE
T ss_conf 655698887699-99999998527880446
No 207
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=76.00 E-value=2.7 Score=21.62 Aligned_cols=22 Identities=14% Similarity=0.249 Sum_probs=11.4
Q ss_pred HHHHHHHHCCCCCCEEEEECCC
Q ss_conf 8899896415565316763022
Q gi|254780497|r 122 TADSYIRSGVVRRVMVIGSDTF 143 (324)
Q Consensus 122 ~A~~li~~g~~~~~Lvv~~e~~ 143 (324)
.|...++.-.+.++.++.+|-.
T Consensus 115 ~Ar~~L~~lG~~NV~vv~GDG~ 136 (317)
T PRK13943 115 IAKRNVERLGIENVIFVCGDGY 136 (317)
T ss_pred HHHHHHHHCCCCCEEEEECCCC
T ss_conf 9999999779986499979988
No 208
>PRK03673 competence damage-inducible protein A; Provisional
Probab=75.98 E-value=6.1 Score=19.41 Aligned_cols=83 Identities=24% Similarity=0.349 Sum_probs=46.4
Q ss_pred CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHH---CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE
Q ss_conf 922699999996498411788999880999878110---24751889828988999999999999997402123544336
Q gi|254780497|r 1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKR---RVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLI 77 (324)
Q Consensus 1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~---~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~i 77 (324)
||++-|.++|.-|=.-.+ .+.+..||.+ ..||+-.+..--+.+.-++ .++.+.+++++ |+|
T Consensus 1 MMkaeIIsiG~ElL~G~i--------~dTNa~~la~~L~~~G~~v~~~~tVgD~~~~i-~~~l~~a~~r~-------DlV 64 (396)
T PRK03673 1 MLRVEMLSTGDEVLHGQI--------VDTNAAWLADFFFHQGLPLSRRNTVGDNLDAL-VAILRERSQHA-------DVL 64 (396)
T ss_pred CCEEEEEEECCCHHCCCC--------CCHHHHHHHHHHHHCCCEEEEEEEECCCHHHH-HHHHHHHHHCC-------CEE
T ss_conf 926999998541005743--------34419999999997798188999928989999-99999996149-------999
Q ss_pred EEECC---CCCCCCCCCCCCHHHHHHCC
Q ss_conf 65012---23345898531001122026
Q gi|254780497|r 78 IVATS---TPDQTFPSTAVNIQNRLGMK 102 (324)
Q Consensus 78 i~~s~---~~~~~~p~~a~~i~~~LGl~ 102 (324)
|...- |.|++. .--+++.+|.+
T Consensus 65 I~tGGLGPT~DDlT---~eavA~~~g~~ 89 (396)
T PRK03673 65 IVNGGLGPTSDDLS---ALAAATAKGEG 89 (396)
T ss_pred EECCCCCCCCCHHH---HHHHHHHHCCC
T ss_conf 99388489983357---99999985688
No 209
>PRK07591 threonine synthase; Validated
Probab=75.53 E-value=4.7 Score=20.09 Aligned_cols=68 Identities=13% Similarity=0.223 Sum_probs=45.3
Q ss_pred CCCCCC-HHHHHHHHHHCC----CCHHHHHHH---HHH-HC---CCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf 244444-158999999719----787673365---865-19---330126999999999806889998999999714501
Q gi|254780497|r 249 VPHQAN-WRIINSIVDKMK----IPFDKVIVT---VDI-HG---NTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFT 316 (324)
Q Consensus 249 ~~Hq~~-~~~~~~~~~~lg----l~~e~~~~~---~~~-~G---n~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s 316 (324)
+.++.+ ...++.+.+.=| ++.+.+..- +.+ -| -..+|..+.+|..+.++|.++++++|++.-.|.|+.
T Consensus 314 ig~P~~~~~~l~avr~sgG~~v~VsD~Ei~~A~~~La~~eGi~vEpasA~alAgl~kl~e~G~i~~de~VV~~lTG~GLK 393 (422)
T PRK07591 314 IGNPADGPYALDIARRTGGAIEDVTDEEIIEGIKLLARTEGIFTETAGGTTVAVLKKLVEAGKIDPDETTVVYITGNGLK 393 (422)
T ss_pred ECCCCCHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
T ss_conf 07988889999999986998999889999999999997389777860899999999999769999999499990887667
No 210
>CHL00094 dnaK heat shock protein 70
Probab=75.33 E-value=4.3 Score=20.33 Aligned_cols=49 Identities=14% Similarity=0.120 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH---HHHHHHHHCCCCHH
Q ss_conf 55777777788889874001000121024444415---89999997197876
Q gi|254780497|r 222 YAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWR---IINSIVDKMKIPFD 270 (324)
Q Consensus 222 ~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~---~~~~~~~~lgl~~e 270 (324)
.........++++|++++++++|||.+++-=++-+ +.+.+.+.+|-++.
T Consensus 306 ~l~~r~~~~v~~~L~~a~l~~~dId~ViLVGGstRiP~V~~~l~~~fgk~~~ 357 (622)
T CHL00094 306 DLIDRCRIPVENALKDAKLDKSDIDEVVLVGGSTRIPAIQELVKSLLGKDPN 357 (622)
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHCEEEEEECCCCCCHHHHHHHHHHHCCCCC
T ss_conf 9999999999999998199988943999938812567899999998589967
No 211
>PRK13411 molecular chaperone DnaK; Provisional
Probab=74.67 E-value=6.5 Score=19.19 Aligned_cols=42 Identities=24% Similarity=0.345 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH---HHHHHHHHC
Q ss_conf 777777788889874001000121024444415---899999971
Q gi|254780497|r 224 VEKAVELIEKVFDSTHLTIENIDWFVPHQANWR---IINSIVDKM 265 (324)
Q Consensus 224 ~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~---~~~~~~~~l 265 (324)
.....+.++++|++++++++|||.+++-=++-+ +.+.+.+.+
T Consensus 307 ~~rt~~pv~~aL~dA~l~~~dId~ViLVGGSTRIP~Vq~~v~~~F 351 (655)
T PRK13411 307 VEATIEPVQQALKDAGLTPEDIDRIILVGGSTRIPAVQEAIQQFF 351 (655)
T ss_pred HHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCCHHHHHHHHHHH
T ss_conf 999998899999980998311789999888146579999999982
No 212
>TIGR00151 ispF 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; InterPro: IPR003526 This entry represents MECDP (2-C-methyl-D-erythritol 2,4-cyclodiphosphate) synthetase, an enzyme in the non-mevalonate pathway of isoprenoid synthesis, isoprenoids being essential in all organisms. Isoprenoids can also be synthesized through the mevalonate pathway. The non-mevolante route is used by many bacteria and human pathogens, including Mycobacterium tuberculosis and Plasmodium falciparum. This route appears to involve seven enzymes. MECDP synthetase catalyses the intramolecular attack by a phosphate group on a diphosphate, with cytidine monophosphate (CMP) acting as the leaving group to give the cyclic diphosphate product MEDCP. The enzyme is a trimer with three active sites shared between adjacent copies of the protein. The enzyme also has two metal binding sites, the metals playing key roles in catalysis. A number of proteins from eukaryotes and prokaryotes share this common N-terminal signature and appear to be involved in terpenoid biosynthesis. The ygbB protein is a putative enzyme of this type .; GO: 0008685 2-C-methyl-D-erythritol 24-cyclodiphosphate synthase activity, 0016114 terpenoid biosynthetic process.
Probab=74.66 E-value=2.9 Score=21.45 Aligned_cols=58 Identities=21% Similarity=0.248 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCC-CC-----HHHHHHHHHHCCCCHHHHH---HHHHHHCCCHH
Q ss_conf 77778888987400100012102444-44-----1589999997197876733---65865193301
Q gi|254780497|r 227 AVELIEKVFDSTHLTIENIDWFVPHQ-AN-----WRIINSIVDKMKIPFDKVI---VTVDIHGNTSA 284 (324)
Q Consensus 227 ~~~~i~~~L~~~gl~~~did~~~~Hq-~~-----~~~~~~~~~~lgl~~e~~~---~~~~~~Gn~~s 284 (324)
+-+.+.+.+++.|++...||..+.=| |. ..|.+.+++-|+++.|++- +|-++.|-||.
T Consensus 79 lL~~~~~~~~~~gy~~~N~D~tiia~~PKl~P~i~~mR~~iA~~L~i~~d~vnvKATT~EkLG~~Gr 145 (159)
T TIGR00151 79 LLRKAVELVKEKGYRIGNVDVTIIAQRPKLAPHIEAMRENIAELLGIPLDQVNVKATTTEKLGFTGR 145 (159)
T ss_pred HHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC
T ss_conf 9999999998558804568999973189862226899999988846870211325876767754423
No 213
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=73.54 E-value=5.3 Score=19.76 Aligned_cols=30 Identities=10% Similarity=0.177 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 777777888898740010001210244444
Q gi|254780497|r 225 EKAVELIEKVFDSTHLTIENIDWFVPHQAN 254 (324)
Q Consensus 225 ~~~~~~i~~~L~~~gl~~~did~~~~Hq~~ 254 (324)
......++++|++++++++|||.+++-=++
T Consensus 334 ~rt~~~v~~aL~dAgl~~~dId~VILVGGS 363 (657)
T PTZ00186 334 ERSIAPCKQCMKDAGVELKEINDVVLVGGM 363 (657)
T ss_pred HHHHHHHHHHHHHHCCCHHHEEEEEEECCC
T ss_conf 999999999999818998780089995784
No 214
>PRK00055 ribonuclease Z; Reviewed
Probab=72.57 E-value=4.8 Score=20.06 Aligned_cols=68 Identities=22% Similarity=0.307 Sum_probs=44.4
Q ss_pred CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf 92269999999649841178899988099987811024751889828988999999999999997402123544336650
Q gi|254780497|r 1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVA 80 (324)
Q Consensus 1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~ 80 (324)
||++.+.|+|...|..... .+.-.|+ .+ .++-+.|.++.. . .-|.+.++++.+||.|++.
T Consensus 1 mmkit~LGtg~~~p~~~R~---------~s~~li~--~~-~~~iliD~G~G~-------~-~~l~~~~~~~~~l~~I~iT 60 (259)
T PRK00055 1 MMELTFLGTGSGVPTPTRN---------VSSILLR--LG-GELWLFDCGEGT-------Q-RQMLRAGIGPRKIDRIFIT 60 (259)
T ss_pred CCEEEEEECCCCCCCCCCC---------CCEEEEE--EC-CEEEEEECCCHH-------H-HHHHHCCCCHHHCCEEEEE
T ss_conf 9489999068998899996---------4889999--99-908999588159-------9-9999819995576589996
Q ss_pred CCCCCCCC
Q ss_conf 12233458
Q gi|254780497|r 81 TSTPDQTF 88 (324)
Q Consensus 81 s~~~~~~~ 88 (324)
+...|...
T Consensus 61 H~H~DH~~ 68 (259)
T PRK00055 61 HLHGDHIF 68 (259)
T ss_pred CCCHHHHC
T ss_conf 43357665
No 215
>TIGR02445 fadA acetyl-CoA C-acyltransferase FadA; InterPro: IPR012805 This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (2.3.1.16 from EC) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (IPR012799 from INTERPRO). The FadBA complex is the major complex active for beta-oxidation of fatty acids in Escherichia coli.; GO: 0003988 acetyl-CoA C-acyltransferase activity, 0006631 fatty acid metabolic process, 0016042 lipid catabolic process.
Probab=72.28 E-value=2.6 Score=21.74 Aligned_cols=94 Identities=12% Similarity=0.137 Sum_probs=65.5
Q ss_pred CCCHHHHHHHHHHHHHHHH-CCCCCCCCEEEEECCCCCCCC-CCCCCCHHHHH-HCCCC-CCCCCCCCCCCHHHHHHHHH
Q ss_conf 8899999999999999740-212354433665012233458-98531001122-02686-44442101220034678889
Q gi|254780497|r 49 DETTASLGEAAARDALHHA-EMSVDDIDLIIVATSTPDQTF-PSTAVNIQNRL-GMKRG-FAFDMQAVCSGFVYAVTTAD 124 (324)
Q Consensus 49 ~e~~~~la~~Aa~~al~~a-~~~~~~Id~ii~~s~~~~~~~-p~~a~~i~~~L-Gl~~~-~~~di~~~C~~~~~al~~A~ 124 (324)
+..+-||++.-.+++|+|. .++|.+|+-|++++... .+. .-.-++.+..| .+++. .+..++--|-+.+.+|+.+.
T Consensus 22 ~~raedlsahl~~~~l~rn~~~~~~~~~d~~WGCv~q-tleqG~n~ar~a~ll~~~P~~~~a~tv~rlCGssm~alh~~a 100 (385)
T TIGR02445 22 NTRAEDLSAHLIKKLLARNPKVDPAEVEDIYWGCVQQ-TLEQGFNIARNAALLAEVPHEVAAVTVNRLCGSSMQALHDAA 100 (385)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 0136777899999998513355723443454554677-775347888888898734302222455544203589999887
Q ss_pred HHHHHCCCCCCEEEEECCC
Q ss_conf 9896415565316763022
Q gi|254780497|r 125 SYIRSGVVRRVMVIGSDTF 143 (324)
Q Consensus 125 ~li~~g~~~~~Lvv~~e~~ 143 (324)
..|-++..+..+|-+.|-+
T Consensus 101 ~~imt~~~~~~~~GGvehm 119 (385)
T TIGR02445 101 RAIMTGDAEVCLIGGVEHM 119 (385)
T ss_pred HHHHCCCCCEEEECCCCCC
T ss_conf 8763178757998260000
No 216
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=71.90 E-value=7.6 Score=18.78 Aligned_cols=60 Identities=22% Similarity=0.101 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC-CCCC------CCCCCCHHHHHHCCCCC---CCCCCCC
Q ss_conf 99999999999974021235443366501223-3458------98531001122026864---4442101
Q gi|254780497|r 53 ASLGEAAARDALHHAEMSVDDIDLIIVATSTP-DQTF------PSTAVNIQNRLGMKRGF---AFDMQAV 112 (324)
Q Consensus 53 ~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~-~~~~------p~~a~~i~~~LGl~~~~---~~di~~~ 112 (324)
...-+++++++++++++++++||+|-+...|- ..+. -+....|++++|++-.. ..||..|
T Consensus 70 ~~~~~~~i~~~i~~~~~~~~~id~Ig~HGQTi~H~P~~~~TlQiG~~~~ia~~tgi~VV~DFR~~Dia~G 139 (366)
T PRK09585 70 GRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPERGFTLQIGDGALLAELTGITVVADFRRRDVAAG 139 (366)
T ss_pred HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCCCEEEECCCHHHHHHHHCCCEEHHHHHHHHHCC
T ss_conf 9999999999999849980363289758887687158863543398899998819976075379898677
No 217
>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN; InterPro: IPR011975 This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in . This enzyme is related to aldehyde dehydrogenase family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate entry, IPR011966 from INTERPRO..
Probab=70.33 E-value=8.2 Score=18.56 Aligned_cols=81 Identities=21% Similarity=0.308 Sum_probs=50.9
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHH---H
Q ss_conf 99999999999999740212354433665012233458985310011220268-6444421012200346788899---8
Q gi|254780497|r 51 TTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAVTTADS---Y 126 (324)
Q Consensus 51 ~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al~~A~~---l 126 (324)
-++=|.++-||+.|-++|+|| ++|..+-..|.. .++++|=+.+ .-..|.+++-+=+-.=.+.|+. |
T Consensus 239 LP~AltV~vAreVL~EaGfDP---~lV~Laa~~p~~-------~~Aq~LAl~P~vr~vDFTGS~AFG~WLe~nArQAqVY 308 (560)
T TIGR02288 239 LPLALTVQVAREVLGEAGFDP---NLVALAAEDPGE-------EVAQRLALDPAVRIVDFTGSNAFGEWLEQNARQAQVY 308 (560)
T ss_pred CHHHHHHHHHHHHHHHHCCCH---HHHHHCCCCCCC-------HHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 026788899999987416773---020011258884-------3788851399538886258871126899866798888
Q ss_pred HH-HCCCCCCEEEEECC
Q ss_conf 96-41556531676302
Q gi|254780497|r 127 IR-SGVVRRVMVIGSDT 142 (324)
Q Consensus 127 i~-~g~~~~~Lvv~~e~ 142 (324)
-+ +| .++++|=|.|-
T Consensus 309 tEkAG-vN~viieSTdd 324 (560)
T TIGR02288 309 TEKAG-VNTVIIESTDD 324 (560)
T ss_pred HHHCC-CCCEEECCHHH
T ss_conf 87506-67158724166
No 218
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=69.53 E-value=4.9 Score=20.00 Aligned_cols=48 Identities=6% Similarity=0.005 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH---HHHHHHHHCCCCHH
Q ss_conf 5777777788889874001000121024444415---89999997197876
Q gi|254780497|r 223 AVEKAVELIEKVFDSTHLTIENIDWFVPHQANWR---IINSIVDKMKIPFD 270 (324)
Q Consensus 223 ~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~---~~~~~~~~lgl~~e 270 (324)
........++++|++++++++|||.+++-=++-+ +.+.+.+.+|-++.
T Consensus 312 L~~rt~~~v~~aL~dA~l~~~dId~ViLVGGSTRiP~Vq~~v~~~Fgk~~~ 362 (621)
T PRK05183 312 LVKRTLLACRRALRDAGVEADEVLEVVMVGGSTRVPLVREAVGEFFGRTPL 362 (621)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHCEEEEEECCCCCCHHHHHHHHHHHCCCCC
T ss_conf 999999999999987136830020999928854566899999998598966
No 219
>PRK09604 putative DNA-binding/iron metalloprotein/AP endonuclease; Reviewed
Probab=69.32 E-value=8.6 Score=18.42 Aligned_cols=33 Identities=30% Similarity=0.425 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCC
Q ss_conf 99999999740212354433665012233458985
Q gi|254780497|r 57 EAAARDALHHAEMSVDDIDLIIVATSTPDQTFPST 91 (324)
Q Consensus 57 ~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~ 91 (324)
...++++|++++++.+|||+|-+. .-| -+.|+.
T Consensus 56 ~~lv~~al~~a~i~~~~id~IAvT-~gP-GL~g~L 88 (335)
T PRK09604 56 PPLLEEALKEAGLSLEDIDAIAVT-AGP-GLVGAL 88 (335)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEEE-CCC-CCCHHH
T ss_conf 999999998659998789789994-799-961139
No 220
>PRK05638 threonine synthase; Validated
Probab=68.29 E-value=9.1 Score=18.28 Aligned_cols=68 Identities=24% Similarity=0.359 Sum_probs=45.6
Q ss_pred CCCCCCH-HHHHHHHHHCC----CCHHHHHH---HHHHHC---CCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf 2444441-58999999719----78767336---586519---330126999999999806889998999999714501
Q gi|254780497|r 249 VPHQANW-RIINSIVDKMK----IPFDKVIV---TVDIHG---NTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFT 316 (324)
Q Consensus 249 ~~Hq~~~-~~~~~~~~~lg----l~~e~~~~---~~~~~G---n~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s 316 (324)
+.++.+. .+++.+.+.=| ++.+.+.. .+.+-| -..||..+.+|.++.++|.++++++|+++-.|.|+.
T Consensus 280 I~~P~~~~~~l~avr~sgG~~vaVsD~EI~~a~~lla~eGif~EPasAaa~Agl~kl~e~G~I~~~e~VV~vlTGsGLK 358 (443)
T PRK05638 280 VKNPVMKEKVIEAIRESGGTAVVVNEEEIMAGEKLLANEGIFAELSSAVVMPALLKLVETGFIEKGDRVVLVVTGSGLK 358 (443)
T ss_pred ECCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
T ss_conf 0898899999999998399899828999999999999689147757899999999999769989999299996888777
No 221
>PRK09450 cyaA adenylate cyclase; Provisional
Probab=67.95 E-value=6.5 Score=19.19 Aligned_cols=30 Identities=13% Similarity=0.176 Sum_probs=14.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE
Q ss_conf 8988999999999999997402123544336
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHAEMSVDDIDLI 77 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a~~~~~~Id~i 77 (324)
...-++-||.+- .||+-..--..|..|++|
T Consensus 408 ~~si~~~Dl~iL-~RKLyaaFe~~pGKV~~i 437 (833)
T PRK09450 408 SSSISPQDIGVL-TRKLYAAFERLPGKVTLL 437 (833)
T ss_pred CCCCCHHHHHHH-HHHHHHHHHCCCCCEEEE
T ss_conf 655688887899-999999985178814556
No 222
>TIGR01751 crot-CoA-red crotonyl-CoA reductase; InterPro: IPR010085 Crotonyl-CoA reductase is responsible for the conversion of crotonyl-CoA to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate , . In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae ..
Probab=67.65 E-value=4.5 Score=20.26 Aligned_cols=29 Identities=17% Similarity=0.192 Sum_probs=16.2
Q ss_pred HHHHHHHHHCCCCCCCCE-EEEEEECCCCCE
Q ss_conf 999999998068899989-999997145014
Q gi|254780497|r 288 PLALAVAVKEGRVKKGDC-LLLEAMGGGFTS 317 (324)
Q Consensus 288 ~~~L~~~~~~g~l~~Gd~-vll~~~G~G~s~ 317 (324)
+-+=...++++. -.|.. ||.++-.+|+..
T Consensus 378 g~Ah~~~~~N~~-~~Gn~aVLv~A~rpGLgv 407 (409)
T TIGR01751 378 GKAHQKVLANQH-HQGNVAVLVLAPRPGLGV 407 (409)
T ss_pred HHHHHHHHHCCC-CCCCEEEEEECCCCCCCC
T ss_conf 799999984789-657646887327888856
No 223
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=66.96 E-value=8.8 Score=18.37 Aligned_cols=50 Identities=14% Similarity=0.296 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCC---------CHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 77777788889874001000121024444---------4158999999719787673365
Q gi|254780497|r 225 EKAVELIEKVFDSTHLTIENIDWFVPHQA---------NWRIINSIVDKMKIPFDKVIVT 275 (324)
Q Consensus 225 ~~~~~~i~~~L~~~gl~~~did~~~~Hq~---------~~~~~~~~~~~lgl~~e~~~~~ 275 (324)
..+-..+.+.|.+.|...++| +++||.+ +.-|+...++..++..++.+.+
T Consensus 68 ~~i~~~m~~~l~~~g~~id~i-y~CPh~p~~~c~cRKP~pGMl~~a~~~~~id~~~s~mI 126 (181)
T PRK08942 68 NALHEKMDWSLADRGGDLDGI-YYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMV 126 (181)
T ss_pred HHHHHHHHHHHHHCCCCEEEE-EECCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHCEEE
T ss_conf 999999999999769943137-87689971447788998499999999809884218476
No 224
>pfam03702 UPF0075 Uncharacterized protein family (UPF0075). The proteins is this family are about 370 amino acids long and have no known function.
Probab=65.77 E-value=10 Score=17.97 Aligned_cols=58 Identities=21% Similarity=0.125 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC----------CCCCCHHHHHHCCCC---CCCCCCCC
Q ss_conf 999999999997402123544336650122334589----------853100112202686---44442101
Q gi|254780497|r 54 SLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFP----------STAVNIQNRLGMKRG---FAFDMQAV 112 (324)
Q Consensus 54 ~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p----------~~a~~i~~~LGl~~~---~~~di~~~ 112 (324)
..-++|++++++++++++++||+|-+...|- +..| +.+..|++++|++-. ..-||..|
T Consensus 68 ~~~a~ai~~~i~~~~~~~~~Id~Ig~HGQTi-~H~P~~~~~~TlQiG~~~~iA~~tgi~VV~DFR~~Dia~G 138 (363)
T pfam03702 68 LLFADAVNELLQKQNLKPSQIRAIGCHGQTV-RHEPNGRFPFTMQIGDPNLIAERTGITVVADFRRRDVAAG 138 (363)
T ss_pred HHHHHHHHHHHHHCCCCCCCEEEEECCCCEE-EECCCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHCC
T ss_conf 9999999999998399820224895588605-7788999964466397999978869977387663377668
No 225
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=65.50 E-value=8.7 Score=18.40 Aligned_cols=28 Identities=14% Similarity=0.235 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 7777888898740010001210244444
Q gi|254780497|r 227 AVELIEKVFDSTHLTIENIDWFVPHQAN 254 (324)
Q Consensus 227 ~~~~i~~~L~~~gl~~~did~~~~Hq~~ 254 (324)
....++++|++++++++|||.+++.=++
T Consensus 315 ~~~~i~~aL~~a~l~~~dId~ViLVGGs 342 (657)
T PTZ00009 315 TLQPVEKVLQDAKMDKRSVHDVVLVGGS 342 (657)
T ss_pred HHHHHHHHHHHHCCCHHHEEEEEECCCC
T ss_conf 9999999999737995251499980881
No 226
>PRK11762 nudE ADP-ribose diphosphatase NudE; Provisional
Probab=64.99 E-value=9.2 Score=18.25 Aligned_cols=21 Identities=14% Similarity=0.270 Sum_probs=9.0
Q ss_pred HHHHHHHHHHCCCCCCCCEEE
Q ss_conf 999999974021235443366
Q gi|254780497|r 58 AAARDALHHAEMSVDDIDLII 78 (324)
Q Consensus 58 ~Aa~~al~~a~~~~~~Id~ii 78 (324)
.|.|++.+.+|..++++..|.
T Consensus 92 aA~REL~EETGy~a~~~~~l~ 112 (185)
T PRK11762 92 AANRELKEEVGFGARQLTFLK 112 (185)
T ss_pred HHHHHHHHHHCCCCCCEEEEE
T ss_conf 999998897697747689975
No 227
>pfam00814 Peptidase_M22 Glycoprotease family. The Peptidase M22 proteins are part of the HSP70-actin superfamily. The region represented here is an insert into the fold and is not found in the rest of the family (beyond the Peptidase M22 family). Included in this family are the Rhizobial NodU proteins and the HypF regulator. This region also contains the histidine dyad believed to coordinate the metal ion and hence provide catalytic activity. Interestingly the histidines are not well conserved, and there is a lack of experimental evidence to support peptidase activity as a general property of this family. There also appear to be instances of this domain outside of the HSP70-actin superfamily.
Probab=64.36 E-value=11 Score=17.86 Aligned_cols=25 Identities=32% Similarity=0.461 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf 9999999974021235443366501
Q gi|254780497|r 57 EAAARDALHHAEMSVDDIDLIIVAT 81 (324)
Q Consensus 57 ~~Aa~~al~~a~~~~~~Id~ii~~s 81 (324)
...++++|++++++.+|||.|.+..
T Consensus 33 ~~~i~~~l~~a~i~~~did~IAvt~ 57 (225)
T pfam00814 33 LPLIEEALAEAGLSLEDLDAIAVTA 57 (225)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEEEC
T ss_conf 9999999998499965689999805
No 228
>PRK09605 O-sialoglycoprotein endopeptidase/protein kinase; Reviewed
Probab=63.90 E-value=11 Score=17.75 Aligned_cols=87 Identities=15% Similarity=0.249 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCC--CCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 9999999997402123544336650122334589853--1001122026-864444210122003467888998964155
Q gi|254780497|r 56 GEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTA--VNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADSYIRSGVV 132 (324)
Q Consensus 56 a~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a--~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~li~~g~~ 132 (324)
....+++||++++++++|||+|-+.. -| -+.|+.- ...++.|-+. +.+-..|+. |-|=+ ....+.++..
T Consensus 53 i~~vv~~aL~~A~i~~~dIdaIA~T~-GP-GL~g~L~VG~~~Ak~La~~~~~PligVnH-~~gHi-----~~~rl~~~~~ 124 (536)
T PRK09605 53 IPKVIKEALEEAGIKKGDIDLVAFSQ-GP-GLGPCLRVVATAARALALSLDVPLIGVNH-CIAHV-----EIGRLTTGAR 124 (536)
T ss_pred HHHHHHHHHHHCCCCHHHCCEEEECC-CC-CCHHHHHHHHHHHHHHHHHHCCCEEECCH-HHHHH-----HHHHHCCCCC
T ss_conf 99999999998499988898999906-99-81786899999999999984998500340-89887-----4423106987
Q ss_pred C-CCEEEEECCCCCCCCCCC
Q ss_conf 6-531676302243222456
Q gi|254780497|r 133 R-RVMVIGSDTFSRIVDWSD 151 (324)
Q Consensus 133 ~-~~Lvv~~e~~S~~~d~~d 151 (324)
. -+|+|++-.. ..+.+.+
T Consensus 125 ~Pl~L~VSGGhT-qii~~~~ 143 (536)
T PRK09605 125 DPVTLYVSGGNT-QVLAYLN 143 (536)
T ss_pred CCCEEEEECCCE-EEEEECC
T ss_conf 885699976864-8999848
No 229
>PRK06260 threonine synthase; Validated
Probab=63.27 E-value=11 Score=17.67 Aligned_cols=62 Identities=13% Similarity=0.200 Sum_probs=42.6
Q ss_pred HHHHHHHHHCC----CCHHHHHH---HHH-HHCC---CHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCE
Q ss_conf 58999999719----78767336---586-5193---301269999999998068899989999997145014
Q gi|254780497|r 256 RIINSIVDKMK----IPFDKVIV---TVD-IHGN---TSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFTS 317 (324)
Q Consensus 256 ~~~~~~~~~lg----l~~e~~~~---~~~-~~Gn---~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~ 317 (324)
..++.+.+.-| ++.+.+.. .+. +-|- ..|+..+.+|..+.++|.+++++.|++.-.|.|+.-
T Consensus 301 ~~l~al~~s~G~~v~VtD~ei~~A~~~La~~eGi~vEpasA~alAgl~kl~e~G~i~~~~~VV~~lTG~GlKD 373 (400)
T PRK06260 301 KALRAIRESGGTAESVSDEEILAAQRLLARKEGIGVEPASAASVAGLIKLVEMGVIDKDEKVVCVTTGHLLKD 373 (400)
T ss_pred HHHHHHHHHCCEEEEECHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC
T ss_conf 9999999839989998899999999999974890678368999999999997399999997999907887689
No 230
>PRK07409 threonine synthase; Validated
Probab=63.15 E-value=11 Score=17.66 Aligned_cols=36 Identities=25% Similarity=0.413 Sum_probs=30.3
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCE
Q ss_conf 301269999999998068899989999997145014
Q gi|254780497|r 282 TSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFTS 317 (324)
Q Consensus 282 ~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~ 317 (324)
.+|+..+.++-++.++|++.+|+.|+++-.|.|+.-
T Consensus 289 pssaaa~Aa~~kl~~~g~i~~~~~VV~iltg~GlKd 324 (350)
T PRK07409 289 PASAASVAGLLKAKEQGKVPKGSTVVCTLTGNGLKD 324 (350)
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCC
T ss_conf 208999999999997599999996999958898868
No 231
>KOG2707 consensus
Probab=62.79 E-value=9.9 Score=18.03 Aligned_cols=29 Identities=34% Similarity=0.402 Sum_probs=22.2
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEECCCCCCC
Q ss_conf 999999974021235443366501223345
Q gi|254780497|r 58 AAARDALHHAEMSVDDIDLIIVATSTPDQT 87 (324)
Q Consensus 58 ~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~ 87 (324)
...++||++++..|+|+|+|-+ |..|...
T Consensus 88 ~~iqral~aa~~~p~dldaIAV-T~gPGl~ 116 (405)
T KOG2707 88 RLIQRALDAAGLSPKDLDAIAV-TRGPGLP 116 (405)
T ss_pred HHHHHHHHHCCCCCCCCEEEEE-ECCCCCE
T ss_conf 9999999970899455116999-6389964
No 232
>COG3072 CyaA Adenylate cyclase [Nucleotide transport and metabolism]
Probab=62.63 E-value=4 Score=20.59 Aligned_cols=18 Identities=17% Similarity=-0.065 Sum_probs=9.8
Q ss_pred CHHHHHHHHCCCHHHHHH
Q ss_conf 788999880999878110
Q gi|254780497|r 19 SNSDLESIVDTSDGWIKR 36 (324)
Q Consensus 19 ~~~el~~~~~~~~~~i~~ 36 (324)
.-+.+...++++++.|+.
T Consensus 354 ~l~~LvsEW~Ws~~~la~ 371 (853)
T COG3072 354 VLEQLVSEWGWSAARLAE 371 (853)
T ss_pred HHHHHHHHHCCCHHHHHH
T ss_conf 999999885888789998
No 233
>PRK09275 aspartate aminotransferase; Provisional
Probab=62.07 E-value=12 Score=17.54 Aligned_cols=93 Identities=20% Similarity=0.209 Sum_probs=47.9
Q ss_pred HHCCCCCEEEEE--C--CCCCHHHHHHHHHHHHHHHHCCCCCCC-----CEEEEEC-CCCCCCCCCCCC----CHHHHHH
Q ss_conf 102475188982--8--988999999999999997402123544-----3366501-223345898531----0011220
Q gi|254780497|r 35 KRRVGISRRHIA--G--KDETTASLGEAAARDALHHAEMSVDDI-----DLIIVAT-STPDQTFPSTAV----NIQNRLG 100 (324)
Q Consensus 35 ~~~~GI~~R~~~--~--~~e~~~~la~~Aa~~al~~a~~~~~~I-----d~ii~~s-~~~~~~~p~~a~----~i~~~LG 100 (324)
-++.||.+|... . ++..-.++-..++.-+..+.|++|++. |.++-+. -.||+..+.+-. ++.+++-
T Consensus 78 p~~~Gi~~Rf~~fl~~~~~~pG~~fL~~~~~y~~~~~g~d~d~~v~El~dgiiGdnYPvP~RmL~~~E~Iv~~YL~~em~ 157 (531)
T PRK09275 78 PQKEGIAERFETFLEEHKDVPGIDFLRAAISYVRDELGFDPDEFVYEMVDGIIGDNYPVPDRMLVHTEKIVKDYLRQEMC 157 (531)
T ss_pred CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 57022999999999858998368999999999998869998899999998863388999678889899999999999962
Q ss_pred CCCCC--CCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 26864--44421012200346788899896
Q gi|254780497|r 101 MKRGF--AFDMQAVCSGFVYAVTTADSYIR 128 (324)
Q Consensus 101 l~~~~--~~di~~~C~~~~~al~~A~~li~ 128 (324)
-...+ -||+ .+--|++.||-...+-++
T Consensus 158 ~~~~~~~~fdl-FatEGgTAAM~YiF~sL~ 186 (531)
T PRK09275 158 GNRPPPGEFDL-FAVEGGTAAMCYIFDSLK 186 (531)
T ss_pred CCCCCCCCCCE-EECCCCHHHHHHHHHHHH
T ss_conf 89999887316-741672057999999999
No 234
>PRK06721 threonine synthase; Reviewed
Probab=60.73 E-value=13 Score=17.39 Aligned_cols=35 Identities=20% Similarity=0.414 Sum_probs=29.5
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf 30126999999999806889998999999714501
Q gi|254780497|r 282 TSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFT 316 (324)
Q Consensus 282 ~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s 316 (324)
.+++..+.++-++.+++++++|++|+++-.|.|+.
T Consensus 285 pssa~alAallkl~~~g~i~~g~~VV~iltg~GlK 319 (352)
T PRK06721 285 PGSNASLAGVMKHVQSGKIKKGETVVAVLTGNGLK 319 (352)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
T ss_conf 78899999999999839989879899995899877
No 235
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=60.33 E-value=13 Score=17.38 Aligned_cols=27 Identities=7% Similarity=0.260 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEECCCCCC
Q ss_conf 999999997402123544336650122334
Q gi|254780497|r 57 EAAARDALHHAEMSVDDIDLIIVATSTPDQ 86 (324)
Q Consensus 57 ~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~ 86 (324)
.+-..+.|++.|+ .||.+.+|--.|+.
T Consensus 72 h~~m~~~L~~~Gi---~id~Iy~CPH~p~d 98 (354)
T PRK05446 72 HNLMMQIFESQGI---KFDDVLICPHFPED 98 (354)
T ss_pred HHHHHHHHHHCCC---CCCEEEECCCCCCC
T ss_conf 9999999997797---34759988998857
No 236
>pfam06406 StbA StbA protein. This family consists of several bacterial StbA plasmid stability proteins.
Probab=60.30 E-value=7.8 Score=18.69 Aligned_cols=29 Identities=17% Similarity=0.248 Sum_probs=25.6
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCEEE
Q ss_conf 89999999999999974021235443366
Q gi|254780497|r 50 ETTASLGEAAARDALHHAEMSVDDIDLII 78 (324)
Q Consensus 50 e~~~~la~~Aa~~al~~a~~~~~~Id~ii 78 (324)
...+++..-++..||.++|+.|.+|++++
T Consensus 72 yq~s~~N~l~vhHAL~~aGl~~~~V~lvv 100 (318)
T pfam06406 72 YQYSDVNVLAIHHALLTSGLVPQPVDLVV 100 (318)
T ss_pred CCCCHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf 57536789999999997288987058996
No 237
>pfam00862 Sucrose_synth Sucrose synthase. Sucrose synthases catalyse the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534.
Probab=59.59 E-value=7 Score=18.99 Aligned_cols=37 Identities=5% Similarity=0.180 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCHHH-HHHHHHHCCCC
Q ss_conf 77888898740010001210244444158-99999971978
Q gi|254780497|r 229 ELIEKVFDSTHLTIENIDWFVPHQANWRI-INSIVDKMKIP 268 (324)
Q Consensus 229 ~~i~~~L~~~gl~~~did~~~~Hq~~~~~-~~~~~~~lgl~ 268 (324)
++-++.+++.+-+| |.++-+-..... --.++.+||++
T Consensus 389 Da~~ei~~el~g~P---DLIIGNYSDGNLVAsLla~klgVT 426 (550)
T pfam00862 389 DVASEIAAELQAKP---DLIIGNYSDGNLVASLLAHKLGVT 426 (550)
T ss_pred HHHHHHHHHHCCCC---CEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 99999999848998---879841777229999998653871
No 238
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family; InterPro: IPR014188 This entry represents a subfamily of the alcohol dehydrogenase, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This entry includes YhdH from Escherichia coli and YhfP from Bacillus subtilis both of which bind NADPH or NAD, but not zinc. Both proteins have been studied crystallographically for insight into function. .
Probab=59.49 E-value=6.5 Score=19.21 Aligned_cols=152 Identities=15% Similarity=0.162 Sum_probs=66.3
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCEEEE---EECCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHH-HHHHHHHHHH
Q ss_conf 443123440265446543445410123---203555556177548765444332001032024445577-7777788889
Q gi|254780497|r 160 DGAGALILEGVEVKGSSMADTGILSTY---LCSDGSYIDKLYVDGGPSTSRTVGCIRMEGKAVFKYAVE-KAVELIEKVF 235 (324)
Q Consensus 160 DGAaA~ll~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~i~~~L 235 (324)
|.|+-++=|+++.. ..++.-+++.+ ..++|-|.+..+.++..--+-+.+. .. |+-.-.... .-.-+.=..|
T Consensus 65 D~aG~Vv~S~dp~F--~~GD~VivTGyglG~~H~GGysqyaRVp~dWlVpLP~gl-sl--~eAM~~GTAGfTAaL~V~aL 139 (330)
T TIGR02823 65 DLAGTVVSSEDPRF--RPGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGL-SL--REAMALGTAGFTAALSVMAL 139 (330)
T ss_pred CCEEEEEECCCCCC--CCCCEEEEEEECCCCCCCCCCEEEEEECHHHEECCCCCC-CH--HHHHHHHHHHHHHHHHHHHH
T ss_conf 75468984488775--788718997402456515762235673323101588988-98--89998600778999999999
Q ss_pred HHHH-CCCCCCCCC--------------CCC--------CCCHHHHH-HHHHHCCC----CHHHHHH-----HHH--HHC
Q ss_conf 8740-010001210--------------244--------44415899-99997197----8767336-----586--519
Q gi|254780497|r 236 DSTH-LTIENIDWF--------------VPH--------QANWRIIN-SIVDKMKI----PFDKVIV-----TVD--IHG 280 (324)
Q Consensus 236 ~~~g-l~~~did~~--------------~~H--------q~~~~~~~-~~~~~lgl----~~e~~~~-----~~~--~~G 280 (324)
+++| ++|++=.-+ ++| -.+|.--+ .+.++||- +.+.+-. -|+ +++
T Consensus 140 e~~Gl~~P~~GpVlVTGAtGGVGS~Av~~L~~lGY~V~A~tGk~~~~~~yL~~LGA~evi~R~~l~~~a~~kPL~k~~WA 219 (330)
T TIGR02823 140 ERNGLLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEVEYLKELGASEVIDREELSEDAPGKPLEKERWA 219 (330)
T ss_pred HHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCC
T ss_conf 97268888888788706778778999999983797699973783778899986581105771122768788863122222
Q ss_pred ----CCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEE
Q ss_conf ----330126999999999806889998999999714501456878
Q gi|254780497|r 281 ----NTSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFTSGTVLL 322 (324)
Q Consensus 281 ----n~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~a~ll 322 (324)
.+|+.. |+..++ +++.|--|-.||.-+|....++++
T Consensus 220 GAvDtVGG~~----La~~l~--~~~ygG~VA~cGlagG~~L~tTV~ 259 (330)
T TIGR02823 220 GAVDTVGGKT----LANVLA--QLKYGGAVAACGLAGGADLPTTVL 259 (330)
T ss_pred CEEECCCHHH----HHHHHH--HHCCCCEEEEEECCCCCCCCCEEC
T ss_conf 1574687579----999998--406897899994267986350125
No 239
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=58.91 E-value=7.4 Score=18.86 Aligned_cols=34 Identities=29% Similarity=0.291 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCC
Q ss_conf 999999999740212354433665012233458985
Q gi|254780497|r 56 GEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPST 91 (324)
Q Consensus 56 a~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~ 91 (324)
.....+++|++++++.+|||+|-+.. -| -+.|+.
T Consensus 54 i~~li~~al~eA~~~~~dID~IA~T~-gP-GL~gaL 87 (342)
T COG0533 54 IPPLIEEALAEAGVSLEDIDAIAVTA-GP-GLGGAL 87 (342)
T ss_pred HHHHHHHHHHHCCCCHHCCCEEEEEC-CC-CCHHHH
T ss_conf 99999999998499830188899816-99-944778
No 240
>PRK06352 threonine synthase; Validated
Probab=58.76 E-value=14 Score=17.17 Aligned_cols=50 Identities=20% Similarity=0.371 Sum_probs=35.5
Q ss_pred CCHHHHHHH---H-HHHCC---CHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
Q ss_conf 787673365---8-65193---30126999999999806889998999999714501
Q gi|254780497|r 267 IPFDKVIVT---V-DIHGN---TSAASIPLALAVAVKEGRVKKGDCLLLEAMGGGFT 316 (324)
Q Consensus 267 l~~e~~~~~---~-~~~Gn---~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~G~s 316 (324)
++.+..... + ++-|- .+|+..+.+|-++.++|.+.+|++|+++-.|.|+.
T Consensus 263 Vsd~Ei~~A~~~La~~eGi~~epssa~alAallkl~~~G~l~~g~~VV~vltg~GlK 319 (351)
T PRK06352 263 VTDDEIVNAYKKIAAQDGVFIEPGSAASLAGVIQHVANGTIKKGETVVCVFTGNGLK 319 (351)
T ss_pred ECHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
T ss_conf 768999999999999659188777899999999999749999859899995889986
No 241
>TIGR00080 pimt protein-L-isoaspartate O-methyltransferase; InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase () (PCMT) (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyzes the transfer of a methyl group from S- adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerization of normal L-aspartyl and L- asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process.
Probab=56.46 E-value=7.5 Score=18.82 Aligned_cols=50 Identities=16% Similarity=0.311 Sum_probs=29.5
Q ss_pred CCCCCCHHHHHH--CCC-CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf 985310011220--268-644442101220034678889989641556531676302243
Q gi|254780497|r 89 PSTAVNIQNRLG--MKR-GFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSR 145 (324)
Q Consensus 89 p~~a~~i~~~LG--l~~-~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~ 145 (324)
|-+.++..+-|. |.+ .-++||.+|| |.. +.-+|.- + .++.+||+-|+.-.
T Consensus 66 p~mvA~m~~yL~nhL~~~~~vLeiG~GS-GY~-aavlA~~-v----~~~G~V~SiEri~~ 118 (228)
T TIGR00080 66 PHMVAKMTEYLENHLKPGAKVLEIGTGS-GYQ-AAVLAEI-V----GRDGLVVSIERIPE 118 (228)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEECCCC-HHH-HHHHHHH-H----HCCCEEEEEEECHH
T ss_conf 7899999998885214035566504785-589-9999998-7----13971899853578
No 242
>pfam00012 HSP70 Hsp70 protein. Hsp70 chaperones help to fold many proteins. Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region.
Probab=56.29 E-value=15 Score=16.91 Aligned_cols=51 Identities=20% Similarity=0.186 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH---HHHHHHHHCCCCHHH
Q ss_conf 455777777788889874001000121024444415---899999971978767
Q gi|254780497|r 221 KYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWR---IINSIVDKMKIPFDK 271 (324)
Q Consensus 221 ~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~---~~~~~~~~lgl~~e~ 271 (324)
+.....+...++++|++++++++|||.+++.=++-+ +.+.+.+.+|-+..+
T Consensus 302 ~~l~~r~~~~i~~~L~~a~l~~~dId~ViLvGGssRiP~Vq~~l~~~fg~~~~~ 355 (598)
T pfam00012 302 ADLFERTLEPVEKALKDAKLSKSEIDEVVLVGGSTRIPAVQELVKEFFGKEPSK 355 (598)
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 999999999998789872899545125786188656768999999986899666
No 243
>COG3894 Uncharacterized metal-binding protein [General function prediction only]
Probab=54.33 E-value=16 Score=16.71 Aligned_cols=65 Identities=20% Similarity=0.062 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH-HHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 7777788889874001000121024444415-89999997197876733658651933012699999
Q gi|254780497|r 226 KAVELIEKVFDSTHLTIENIDWFVPHQANWR-IINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLAL 291 (324)
Q Consensus 226 ~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~-~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L 291 (324)
.+..-+.-+++++|+.++|++.+.+--+... +.-.-+..+|+-|+-.. .+..+||++-+--..+|
T Consensus 475 AirAG~~tL~~kaGie~eDie~~ymAGAfGtyid~~~A~~iGliPd~~~-kV~q~GNtslagAr~aL 540 (614)
T COG3894 475 AIRAGHMTLIEKAGIELEDIERIYMAGAFGTYIDAKKAMVIGLIPDCDL-KVKQIGNTSLAGAREAL 540 (614)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHEEECCCCCCCCCHHHHHEEECCCCCCH-HHHHHCCCHHHHHHHHH
T ss_conf 8998899999980997554244032145523026567303505678515-46543660688899998
No 244
>TIGR00289 TIGR00289 conserved hypothetical protein TIGR00289; InterPro: IPR005237 This family of conserved hypothetical proteins has no known function. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs in the family, the much longer protein YLR143W from Saccharomyces cerevisiae (Baker's yeast), and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group..
Probab=53.37 E-value=8.7 Score=18.39 Aligned_cols=28 Identities=14% Similarity=0.370 Sum_probs=16.9
Q ss_pred CCEEEEECCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 43366501223345898531001122026
Q gi|254780497|r 74 IDLIIVATSTPDQTFPSTAVNIQNRLGMK 102 (324)
Q Consensus 74 Id~ii~~s~~~~~~~p~~a~~i~~~LGl~ 102 (324)
+|.|+.+.....|. .+=--.|+++||++
T Consensus 90 vea~~~Ga~~S~YQ-K~Rid~vCrelGlk 117 (227)
T TIGR00289 90 VEAVVIGAIESEYQ-KSRIDKVCRELGLK 117 (227)
T ss_pred CCEEEECCEECCHH-HHHHHHHHHHHCCH
T ss_conf 45478853410112-33577887771410
No 245
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=51.92 E-value=11 Score=17.70 Aligned_cols=32 Identities=19% Similarity=0.286 Sum_probs=18.5
Q ss_pred CCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHH
Q ss_conf 58985310011220268-6444421012200346
Q gi|254780497|r 87 TFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYA 119 (324)
Q Consensus 87 ~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~a 119 (324)
..|...+++.+.|.+++ .-+++|..| +|+..|
T Consensus 56 s~P~~vA~m~~~L~~~~g~~VLEIGtG-sGY~aA 88 (209)
T COG2518 56 SAPHMVARMLQLLELKPGDRVLEIGTG-SGYQAA 88 (209)
T ss_pred CCCHHHHHHHHHHCCCCCCEEEEECCC-CHHHHH
T ss_conf 574799999997489999868887778-309999
No 246
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=51.69 E-value=15 Score=16.97 Aligned_cols=33 Identities=15% Similarity=0.071 Sum_probs=17.3
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHC
Q ss_conf 1000121024444415899999971978767336586519
Q gi|254780497|r 241 TIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHG 280 (324)
Q Consensus 241 ~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~G 280 (324)
...++|++ ..|-+... -.|++++++....+++|
T Consensus 334 ~~~~f~~i-~~Q~GMFs------y~Gls~~QV~rLree~~ 366 (396)
T COG1448 334 APRNFDFI-ISQRGMFS------YTGLSPEQVDRLREEFG 366 (396)
T ss_pred CCCCCCHH-HHCCCEEE------CCCCCHHHHHHHHHHCC
T ss_conf 88662247-54675244------58999999999998566
No 247
>COG2073 CbiG Cobalamin biosynthesis protein CbiG [Coenzyme metabolism]
Probab=51.63 E-value=18 Score=16.44 Aligned_cols=86 Identities=24% Similarity=0.275 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCC--CCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf 7777778888987400100012102444--44158999999719787673365865193301269999999998068899
Q gi|254780497|r 225 EKAVELIEKVFDSTHLTIENIDWFVPHQ--ANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEGRVKK 302 (324)
Q Consensus 225 ~~~~~~i~~~L~~~gl~~~did~~~~Hq--~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~l~~ 302 (324)
..+...++++|+..++.+.+++.+.... .+...+.+..+.+++|..-+-...++.| +.+.+-+.+|-. .+
T Consensus 209 ~~~~~~i~~~l~~~~l~~~~i~~i~s~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~g-v~~vae~~al~~---~~---- 280 (298)
T COG2073 209 ELLECAIEKALEGLGLAPKRIDGIASIALKADEPGLIQLAKKLGVPFITFEFVLKEVG-VPGVAEPAALLA---SG---- 280 (298)
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHEEEHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHC-CCCHHHHHHHHH---CC----
T ss_conf 8999999999987599855632234078753577789999980999441167888738-730356889985---79----
Q ss_pred CCEEEEEEECCCCCEEE
Q ss_conf 98999999714501456
Q gi|254780497|r 303 GDCLLLEAMGGGFTSGT 319 (324)
Q Consensus 303 Gd~vll~~~G~G~s~~a 319 (324)
..+..-.++.|.|.+.
T Consensus 281 -~l~~~~~~~~~vTiai 296 (298)
T COG2073 281 -GLLVKKAKGNGVTIAI 296 (298)
T ss_pred -CCEEEEECCCCEEEEE
T ss_conf -8266650377417884
No 248
>pfam01968 Hydantoinase_A Hydantoinase/oxoprolinase. This family includes the enzymes hydantoinase and oxoprolinase EC:3.5.2.9. Both reactions involve the hydrolysis of 5-membered rings via hydrolysis of their internal imide bonds.
Probab=51.53 E-value=18 Score=16.43 Aligned_cols=51 Identities=12% Similarity=0.089 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
Q ss_conf 244455777777788889874001000121024444415899999971978
Q gi|254780497|r 218 AVFKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIP 268 (324)
Q Consensus 218 ~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~ 268 (324)
.+.+.+..++.+.+++...+.|+++.|+..+.+--+...+...++++||++
T Consensus 210 ~ii~~~~~~m~~ai~~~~~~~g~dp~~~~lv~~GGag~~~~~~la~~lg~~ 260 (285)
T pfam01968 210 GILRIANETMADAVRLLSVERGLDPRDFPLVVFGGAGPLHAPELAEELGIK 260 (285)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCCCC
T ss_conf 999999999999999999984999778789998782999999999985999
No 249
>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional
Probab=51.51 E-value=18 Score=16.43 Aligned_cols=82 Identities=20% Similarity=0.296 Sum_probs=50.7
Q ss_pred HHHHHHHCCCCCCCCEEE-EECCCC-CC----CCCCCCCCHHHHH---HCCCCCCCCCCC-CCCCHH---------HHHH
Q ss_conf 999974021235443366-501223-34----5898531001122---026864444210-122003---------4678
Q gi|254780497|r 61 RDALHHAEMSVDDIDLII-VATSTP-DQ----TFPSTAVNIQNRL---GMKRGFAFDMQA-VCSGFV---------YAVT 121 (324)
Q Consensus 61 ~~al~~a~~~~~~Id~ii-~~s~~~-~~----~~p~~a~~i~~~L---Gl~~~~~~di~~-~C~~~~---------~al~ 121 (324)
-.|++|+ ++..|..|| |-...+ |. -.|=+|..|++.| |+.+..+.|+.. ..-||. .+..
T Consensus 194 IDA~KRA--SA~rITAVIPYfGYARQDRK~~~R~PISAKlVAnLL~~aGaDRVITmDLHa~QIQGFFd~nIPVDnL~a~p 271 (443)
T PTZ00145 194 ISTCRRA--SAKKITAVIPYYGYARQDRKLSSRVPISAADVARMIEAMGVDRVVAIDLHSGQIQGFFGPRVPVDNLEAQL 271 (443)
T ss_pred HHHHHHC--CCCCEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCEEEEEECCCHHHCCCCCCCCCCCCCCCCH
T ss_conf 9997661--56746999147752468787899987059999999986398849997068567624258998621365247
Q ss_pred HHHHHHHHCCCCCCEEEEECCCC
Q ss_conf 88998964155653167630224
Q gi|254780497|r 122 TADSYIRSGVVRRVMVIGSDTFS 144 (324)
Q Consensus 122 ~A~~li~~g~~~~~Lvv~~e~~S 144 (324)
+...+++....++.+||+.|.-.
T Consensus 272 ll~~y~~~~~l~n~VVVSPD~Gg 294 (443)
T PTZ00145 272 IGLDYFTKKDLYKPVIVSPDAGG 294 (443)
T ss_pred HHHHHHHHCCCCCCEEECCCCCH
T ss_conf 67999984599888898389974
No 250
>PTZ00340 O-sialoglycoprotein endopeptidase; Provisional
Probab=50.98 E-value=18 Score=16.37 Aligned_cols=33 Identities=24% Similarity=0.318 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCC
Q ss_conf 99999999740212354433665012233458985
Q gi|254780497|r 57 EAAARDALHHAEMSVDDIDLIIVATSTPDQTFPST 91 (324)
Q Consensus 57 ~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~ 91 (324)
...++++|++++++++|||+|-+. .-| -+.++.
T Consensus 61 ~~lv~~aL~~a~i~~~did~IAvT-~gP-GL~g~L 93 (348)
T PTZ00340 61 LSLVQEALEEAGITLSDISLICYT-KGP-GMGAPL 93 (348)
T ss_pred HHHHHHHHHHCCCCHHCCCEEEEC-CCC-CCHHHH
T ss_conf 999999999859984118579972-799-851658
No 251
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=50.68 E-value=16 Score=16.78 Aligned_cols=33 Identities=27% Similarity=0.554 Sum_probs=28.9
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf 889999999999999974021235443366501
Q gi|254780497|r 49 DETTASLGEAAARDALHHAEMSVDDIDLIIVAT 81 (324)
Q Consensus 49 ~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s 81 (324)
.|+..+|-.....+++++++++.+|+|+|+-.|
T Consensus 62 resV~elV~dtl~e~~k~A~l~i~DL~FVVRST 94 (445)
T TIGR03285 62 RESVAELVKDTLKESLKKAGLDIDDLDFVVRST 94 (445)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHCCEEEEEC
T ss_conf 889999999999999997399802255799506
No 252
>cd06449 ACCD Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia.
Probab=50.51 E-value=18 Score=16.33 Aligned_cols=32 Identities=22% Similarity=0.360 Sum_probs=27.4
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCEEEEEEECC
Q ss_conf 30126999999999806889998999999714
Q gi|254780497|r 282 TSAASIPLALAVAVKEGRVKKGDCLLLEAMGG 313 (324)
Q Consensus 282 ~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~ 313 (324)
++++-.+.+|-+.++++.+++|++|+++=.|.
T Consensus 276 vYTgKa~~gl~~~i~~g~~~~~~~IlfiHTGG 307 (307)
T cd06449 276 VYEGKSMQGMIDLVRNGEFKEGSKVLFIHLGG 307 (307)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
T ss_conf 27899999999999869999979189995999
No 253
>TIGR01991 HscA Fe-S protein assembly chaperone HscA; InterPro: IPR010236 Iron-sulphur (FeS) clusters are important cofactors for numerous proteins involved in electron transfer, in redox and non-redox catalysis, in gene regulation, and as sensors of oxygen and iron. These functions depend on the various FeS cluster prosthetic groups, the most common being [2Fe-2S] and [4Fe-4S] . FeS cluster assembly is a complex process involving the mobilisation of Fe and S atoms from storage sources, their assembly into [Fe-S] form, their transport to specific cellular locations, and their transfer to recipient apoproteins. So far, three FeS assembly machineries have been identified, which are capable of synthesising all types of [Fe-S] clusters: ISC (iron-sulphur cluster), SUF (sulphur assimilation), and NIF (nitrogen fixation) systems. The ISC system is conserved in eubacteria and eukaryotes (mitochondria), and has broad specificity, targeting general FeS proteins , . It is encoded by the isc operon (iscRSUA-hscBA-fdx-iscX). IscS is a cysteine desulphurase, which obtains S from cysteine (converting it to alanine) and serves as a S donor for FeS cluster assembly. IscU and IscA act as scaffolds to accept S and Fe atoms, assembling clusters and transfering them to recipient apoproteins. HscA is a molecular chaperone and HscB is a co-chaperone. Fdx is a [2Fe-2S]-type ferredoxin. IscR is a transcription factor that regulates expression of the isc operon. IscX (also known as YfhJ) appears to interact with IscS and may function as an Fe donor during cluster assembly . The SUF system is an alternative pathway to the ISC system that operates under iron starvation and oxidative stress. It is found in eubacteria, archaea and eukaryotes (plastids). The SUF system is encoded by the suf operon (sufABCDSE), and the six encoded proteins are arranged into two complexes (SufSE and SufBCD) and one protein (SufA). SufS is a pyridoxal-phosphate (PLP) protein displaying cysteine desulphurase activity. SufE acts as a scaffold protein that accepts S from SufS and donates it to SufA . SufC is an ATPase with an unorthodox ATP-binding cassette (ABC)-like component. No specific functions have been assigned to SufB and SufD. SufA is homologous to IscA , acting as a scaffold protein in which Fe and S atoms are assembled into [FeS] cluster forms, which can then easily be transferred to apoproteins targets. In the NIF system, NifS and NifU are required for the formation of metalloclusters of nitrogenase in Azotobacter vinelandii, and other organisms, as well as in the maturation of other FeS proteins. Nitrogenase catalyses the fixation of nitrogen. It contains a complex cluster, the FeMo cofactor, which contains molybdenum, Fe and S. NifS is a cysteine desulphurase. NifU binds one Fe atom at its N-terminal, assembling an FeS cluster that is transferred to nitrogenase apoproteins . Nif proteins involved in the formation of FeS clusters can also be found in organisms that do not fix nitrogen . This entry represents the HscA chaperone protein from the SUF system. HscA (or Hsc66) is a specialised bacterial Hsp70-class molecular chaperone that participates in the assembly of iron-sulphur cluster proteins. HscA resembles DnaK, but belongs to a separate clade. HscA interacts with IscU, which is believed to serve as a template for Fe-S cluster formation. The HscA-IscU interaction is facilitated by the J-type co-chaperone protein HscB (or Hsc20), which binds to both HscA and IscU, bringing them into contact with each other. HscA recognises a conserved LPPVK sequence motif at positions 99-103 of IscU .; GO: 0005524 ATP binding, 0016887 ATPase activity, 0051082 unfolded protein binding, 0016226 iron-sulfur cluster assembly.
Probab=50.11 E-value=13 Score=17.21 Aligned_cols=106 Identities=19% Similarity=0.275 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEE-CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHH---HHHHHHHCC
Q ss_conf 9999999997402123544336650-122334589853100112202686444421012200346788---899896415
Q gi|254780497|r 56 GEAAARDALHHAEMSVDDIDLIIVA-TSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTT---ADSYIRSGV 131 (324)
Q Consensus 56 a~~Aa~~al~~a~~~~~~Id~ii~~-s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~---A~~li~~g~ 131 (324)
..+++|+||+++|+++++|.-||.+ .+| -+|-.-.+|.+.+|-++-. ||+=- -+.||-. |.-|.-+.+
T Consensus 322 tl~~crrAlkDaGV~~~e~~~VvmVGGST---Rvp~Vr~~VaelFg~~PL~--~ldPD---~VVAlGAAiQAd~LaGNk~ 393 (628)
T TIGR01991 322 TLLPCRRALKDAGVEKEEVKGVVMVGGST---RVPKVREAVAELFGREPLT--DLDPD---KVVALGAAIQADVLAGNKR 393 (628)
T ss_pred HHHHHHHHHHHCCCCHHHCCEEEEECCCC---CHHHHHHHHHHHHCCCCCC--CCCCC---HHHHHHHHHHHHHHCCCCC
T ss_conf 21678888875278832532657862654---6167999998863778788--88751---4246558998755326888
Q ss_pred CCCCEE-------EEECCCC----CCCCCC--CCCC----CCCCCCCCCEEEEEC
Q ss_conf 565316-------7630224----322245--6632----323454431234402
Q gi|254780497|r 132 VRRVMV-------IGSDTFS----RIVDWS--DRST----CVLFGDGAGALILEG 169 (324)
Q Consensus 132 ~~~~Lv-------v~~e~~S----~~~d~~--d~~~----~~lfGDGAaA~ll~~ 169 (324)
..--|+ .+-|++- +++... -|.. ..+|=||=+|+.+--
T Consensus 394 ~~elLLLDV~PLSLGlETmGGL~EKiIPRN~tiP~ARAQ~FTTFKDgQTAM~IhV 448 (628)
T TIGR01991 394 DEELLLLDVIPLSLGLETMGGLMEKIIPRNSTIPVARAQDFTTFKDGQTAMVIHV 448 (628)
T ss_pred CCCEEHHCCCCHHCCHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEE
T ss_conf 8640011012111002320673566527862998512665545455852668876
No 254
>TIGR01921 DAP-DH diaminopimelate dehydrogenase; InterPro: IPR010190 This entry represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine biosynthesis in Corynebacterium, Bacterioides, Porphyromonas and other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterised ..
Probab=50.00 E-value=19 Score=16.28 Aligned_cols=117 Identities=24% Similarity=0.312 Sum_probs=67.5
Q ss_pred CCEE--EEEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEE
Q ss_conf 9226--99999996498411788999880999878110247518898289889999999999999974021235443366
Q gi|254780497|r 1 MIRS--TVRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLII 78 (324)
Q Consensus 1 M~~~--~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii 78 (324)
|.++ .|.|+|= +.. ..++.+...+.. +..||-+|+=+. +.+.|.+++.-+..++--.-++||++|
T Consensus 1 M~kiRaaIVGYGN------lG~-~V~~ai~~~PDm--Elvgv~~Rrd~~----t~~va~~~~vy~V~~~~K~~~dvdv~i 67 (326)
T TIGR01921 1 MSKIRAAIVGYGN------LGK-SVEEAIQQAPDM--ELVGVFRRRDAE----TLDVAEELAVYAVVEDEKELEDVDVLI 67 (326)
T ss_pred CCEEEEEEECCCC------HHH-HHHHHHHCCCCC--EEEEEEEECCCC----CCCHHHCCCHHHHHHHHHCCCCEEEEE
T ss_conf 9705788862232------007-999998408980--489988707887----576112252022222232028825999
Q ss_pred EECCCCC---CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf 5012233---45898531001122026864444210122003467888998964155653167630
Q gi|254780497|r 79 VATSTPD---QTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSD 141 (324)
Q Consensus 79 ~~s~~~~---~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e 141 (324)
.|+-|.- +.-|..|..+ ...=+||+...-.-+-.+|+.|.. ..++|=||++-
T Consensus 68 LC~gsatd~pe~~p~fA~~~------nTvDsfD~H~~Ip~~r~~~DaaA~-----~~g~VSvis~G 122 (326)
T TIGR01921 68 LCTGSATDLPEQKPYFAAFI------NTVDSFDIHTDIPDLRRTLDAAAK-----EAGAVSVISAG 122 (326)
T ss_pred ECCCCCCCCCCCCCCCEEEE------ECCCCCCCCCCHHHHHHHHHHHHH-----HCCCEEEEEEC
T ss_conf 73886455543451001221------012365022420789999999998-----61987899834
No 255
>PRK02628 nadE NAD synthetase; Reviewed
Probab=48.21 E-value=17 Score=16.48 Aligned_cols=53 Identities=15% Similarity=0.114 Sum_probs=27.9
Q ss_pred HHHHHHHHCCCCCCCCCCC-CCC----CHHHHHHHHHHCCCCHH-----HH-HHHHHHHCCCHH
Q ss_conf 8889874001000121024-444----41589999997197876-----73-365865193301
Q gi|254780497|r 232 EKVFDSTHLTIENIDWFVP-HQA----NWRIINSIVDKMKIPFD-----KV-IVTVDIHGNTSA 284 (324)
Q Consensus 232 ~~~L~~~gl~~~did~~~~-Hq~----~~~~~~~~~~~lgl~~e-----~~-~~~~~~~Gn~~s 284 (324)
-.+++..|+..++|--+.+ -+. +..--..+++.||+... .. ...+..+||...
T Consensus 383 a~A~d~Lg~~r~~V~~vtMPs~~TS~~S~~dA~~La~~LGi~~~~I~I~~a~~~~~~di~~~~~ 446 (678)
T PRK02628 383 AKAFDRLGLPRKNILAYTMPGFGTTDRTKNNAVALMKALGVTAREIDIRPAALQMLKDIGHPFA 446 (678)
T ss_pred HHHHHHHCCCHHCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCHHH
T ss_conf 9999984897122489977887657878999999999729977997629999999998444222
No 256
>KOG2509 consensus
Probab=47.98 E-value=20 Score=16.08 Aligned_cols=21 Identities=24% Similarity=0.417 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCC
Q ss_conf 012699999999980688999
Q gi|254780497|r 283 SAASIPLALAVAVKEGRVKKG 303 (324)
Q Consensus 283 ~sas~~~~L~~~~~~g~l~~G 303 (324)
..+.++=+|-..+++-+-+.|
T Consensus 402 TacA~~R~l~aiLEnyQ~edG 422 (455)
T KOG2509 402 TACATPRALCAILENYQTEDG 422 (455)
T ss_pred HHHHHHHHHHHHHHHCCCCCC
T ss_conf 667646788776753467788
No 257
>PRK12338 hypothetical protein; Provisional
Probab=47.94 E-value=20 Score=16.07 Aligned_cols=43 Identities=7% Similarity=0.214 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCC-------CC---CHHHHHHHHHHCCCCHHH
Q ss_conf 77888898740010001210244-------44---415899999971978767
Q gi|254780497|r 229 ELIEKVFDSTHLTIENIDWFVPH-------QA---NWRIINSIVDKMKIPFDK 271 (324)
Q Consensus 229 ~~i~~~L~~~gl~~~did~~~~H-------q~---~~~~~~~~~~~lgl~~e~ 271 (324)
+.....+.++|-+..||.|-+|- +. ...-.+.+.+.|+=.+++
T Consensus 221 ~~e~eII~~~~~~i~dI~y~ipgfk~pl~r~v~v~d~~e~d~Fik~ln~~p~~ 273 (320)
T PRK12338 221 DVEDEIIKENNGRITDISYPIPGFKDPLKRSVNIYDRDEADKFIKILNEEKKS 273 (320)
T ss_pred HHHHHHHHHCCCEEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHCCHHH
T ss_conf 88789999739758751002887574312344778707899999998308556
No 258
>TIGR02810 agaZ_gatZ D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit; InterPro: IPR012062 Escherichia coli and other enteric bacteria contain two closely related D-tagatose 1,6-bisphosphate (TagBP)-specific aldolases involved in catabolism of galactitol (genes gatY gatZ) and of N-acetyl-galactosamine and D-galactosamine (genes kbaY, kbaZ, also called agaY, agaZ). The catalytic subunits GatY/KbaY alone are sufficient to show aldolase activity and contain most or all of the residues that have been identified as essential in substrate/product recognition and catalysis for class II aldolases , . However, these aldolases differ from other Class II aldolases (which are homodimeric enzymes) in that they require subunits GatZ/KbaZ for full activity and for good in vivo and in vitro stability. The Z subunits alone do not show any aldolase activity . It should be noted that the previous suggestion of a tagatose 6P-kinase function for AgaZ and other members of this family turned out to be erroneous , .; GO: 0009024 tagatose-6-phosphate kinase activity, 0019402 galactitol metabolic process.
Probab=46.98 E-value=6.1 Score=19.37 Aligned_cols=60 Identities=22% Similarity=0.306 Sum_probs=27.9
Q ss_pred CCCCEEEEE-----CCC---CCHHHHHHHHHHHH------HH-HHCCCCCCCCEEEEECCCCCCCCCCC-------CCCH
Q ss_conf 475188982-----898---89999999999999------97-40212354433665012233458985-------3100
Q gi|254780497|r 38 VGISRRHIA-----GKD---ETTASLGEAAARDA------LH-HAEMSVDDIDLIIVATSTPDQTFPST-------AVNI 95 (324)
Q Consensus 38 ~GI~~R~~~-----~~~---e~~~~la~~Aa~~a------l~-~a~~~~~~Id~ii~~s~~~~~~~p~~-------a~~i 95 (324)
-|.++=|.= ..| .+..++|.+|||-| .. +.|-. ++-+|| +|.. ++|+= |..-
T Consensus 115 AGF~KIHLDaSM~CagDP~PL~D~t~A~RAArLc~VAE~a~~~~~ge~--~p~YVI-GTEV---PvPGGetGGDaDA~e~ 188 (430)
T TIGR02810 115 AGFTKIHLDASMSCAGDPIPLPDATIAERAARLCAVAEAAATEERGET--KPVYVI-GTEV---PVPGGETGGDADALEA 188 (430)
T ss_pred HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC--CCCEEE-EEEE---CCCCCCCCCCHHHHHH
T ss_conf 588501011664578878663605789999999999999987422788--850365-1022---4887888765046766
Q ss_pred HHH--HHCCC
Q ss_conf 112--20268
Q gi|254780497|r 96 QNR--LGMKR 103 (324)
Q Consensus 96 ~~~--LGl~~ 103 (324)
... |-.+.
T Consensus 189 l~~hel~VT~ 198 (430)
T TIGR02810 189 LQEHELAVTT 198 (430)
T ss_pred HHCCCCCCCC
T ss_conf 5304778888
No 259
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=45.77 E-value=17 Score=16.47 Aligned_cols=60 Identities=23% Similarity=0.065 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC----------CCCCCHHHHHHCCCCC---CCCCCCC
Q ss_conf 99999999999997402123544336650122334589----------8531001122026864---4442101
Q gi|254780497|r 52 TASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFP----------STAVNIQNRLGMKRGF---AFDMQAV 112 (324)
Q Consensus 52 ~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p----------~~a~~i~~~LGl~~~~---~~di~~~ 112 (324)
...+-++|++.++++.++.|+||+.|.|...+- ...| ....+|+++.|++... .-|+-.|
T Consensus 71 l~~~~a~av~~ll~~~~l~~~~i~~iG~HGQTV-~H~p~~~~~~t~Qlgd~~~iA~~TGi~~v~dfR~~D~a~G 143 (371)
T COG2377 71 LALLHAQAVAALLAEQGLLPRDIRAIGCHGQTV-LHRPPGHAPDTVQLGDGPLIAELTGITVVGDFRRRDMAAG 143 (371)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHCCEEECCCCCC-CCCCCCCCCEEEECCCHHHHHHHHCCCCHHHHCCCCCCCC
T ss_conf 999999999999997299977682640478422-5789988880223486377799869764766123344568
No 260
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=45.71 E-value=22 Score=15.86 Aligned_cols=28 Identities=7% Similarity=0.055 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHH-CCCCCCEEEEECCCCC
Q ss_conf 467888998964-1556531676302243
Q gi|254780497|r 118 YAVTTADSYIRS-GVVRRVMVIGSDTFSR 145 (324)
Q Consensus 118 ~al~~A~~li~~-g~~~~~Lvv~~e~~S~ 145 (324)
-.+.+|..+-+. ....+=||++++..+.
T Consensus 92 D~~~tA~~La~~i~~~~~DLIl~G~~s~D 120 (202)
T cd01714 92 DTLATAKALAAAIKKIGVDLILTGKQSID 120 (202)
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEEEECCC
T ss_conf 98999999999998759988999545457
No 261
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=45.25 E-value=22 Score=15.81 Aligned_cols=12 Identities=17% Similarity=0.086 Sum_probs=7.2
Q ss_pred CCCEEEEECCCC
Q ss_conf 653167630224
Q gi|254780497|r 133 RRVMVIGSDTFS 144 (324)
Q Consensus 133 ~~~Lvv~~e~~S 144 (324)
.+=||+++...+
T Consensus 112 ~~DLVl~G~~s~ 123 (256)
T PRK03359 112 GFDLILCGDGSS 123 (256)
T ss_pred CCCEEEEECCCC
T ss_conf 999999925102
No 262
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=44.73 E-value=23 Score=15.76 Aligned_cols=54 Identities=20% Similarity=0.325 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCC---------HHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 777777888898740010001210244444---------1589999997197876733658651
Q gi|254780497|r 225 EKAVELIEKVFDSTHLTIENIDWFVPHQAN---------WRIINSIVDKMKIPFDKVIVTVDIH 279 (324)
Q Consensus 225 ~~~~~~i~~~L~~~gl~~~did~~~~Hq~~---------~~~~~~~~~~lgl~~e~~~~~~~~~ 279 (324)
......+...|++.|.+.++| +++||.+. .-|+..+.+..++..++.+.+-++.
T Consensus 70 ~~~~~~m~~~l~~~gv~id~i-~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~ 132 (181)
T COG0241 70 DKLHNKMLKILASQGVKIDGI-LYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRL 132 (181)
T ss_pred HHHHHHHHHHHHHCCCCCCEE-EECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCH
T ss_conf 989999999999749703649-987889877776669975899999998288822017840768
No 263
>TIGR02350 prok_dnaK chaperone protein DnaK; InterPro: IPR012725 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolysing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. In prokaryotes, the grpE protein is a co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold . DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for the Mycoplasma sequence) found clustered with other genes of this systems. This entry excludes DnaK homologues that are not DnaK itself, such as the heat shock cognate protein HscA (IPR010236 from INTERPRO). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of DnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; the lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.; GO: 0005524 ATP binding, 0051082 unfolded protein binding, 0006457 protein folding.
Probab=44.41 E-value=23 Score=15.73 Aligned_cols=72 Identities=19% Similarity=0.263 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH---HHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
Q ss_conf 55777777788889874001000121024444415---899999971978767336586519330126999999999806
Q gi|254780497|r 222 YAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWR---IINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAVAVKEG 298 (324)
Q Consensus 222 ~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~---~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g 298 (324)
..+.....-++++|.+++++++|||.+++==++-+ +.+.+.+.+|-.+.+.++ .|=.+++=.|++.|
T Consensus 303 dLv~~~~~p~~~aL~DA~l~~~~I~~v~LVGG~TRiP~V~~~V~~~~GK~p~~~vN----------PDEvVAiGAAiQgG 372 (598)
T TIGR02350 303 DLVERTKEPVRQALKDAGLSASDIDEVILVGGSTRIPAVQELVKEFFGKEPNKSVN----------PDEVVAIGAAIQGG 372 (598)
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC----------CHHHHHHHHHHHHH
T ss_conf 99999899999999753788436666898558841248999999872988788888----------05888887888754
Q ss_pred CCCCCC
Q ss_conf 889998
Q gi|254780497|r 299 RVKKGD 304 (324)
Q Consensus 299 ~l~~Gd 304 (324)
.|+ ||
T Consensus 373 VL~-Gd 377 (598)
T TIGR02350 373 VLK-GD 377 (598)
T ss_pred HCC-CC
T ss_conf 317-87
No 264
>pfam02887 PK_C Pyruvate kinase, alpha/beta domain. As well as being found in pyruvate kinase this family is found as an isolated domain in some bacterial proteins.
Probab=44.16 E-value=23 Score=15.70 Aligned_cols=25 Identities=44% Similarity=0.531 Sum_probs=17.2
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEEEE
Q ss_conf 9999999998068899989999997
Q gi|254780497|r 287 IPLALAVAVKEGRVKKGDCLLLEAM 311 (324)
Q Consensus 287 ~~~~L~~~~~~g~l~~Gd~vll~~~ 311 (324)
+-.++..+.+.|.+++||++++++-
T Consensus 77 i~~a~~~l~~~g~~~~GD~vVvv~G 101 (117)
T pfam02887 77 IAEALRVAKDAGLIKKGDLVVVTAG 101 (117)
T ss_pred HHHHHHHHHHCCCCCCCCEEEEEEC
T ss_conf 9999999998699999998999846
No 265
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=43.52 E-value=14 Score=17.03 Aligned_cols=80 Identities=11% Similarity=0.143 Sum_probs=34.0
Q ss_pred HHHHHHHHCCCCCCCCEEEEECC-CCCCCCCCCCCCHHHHHHCCC-CCCCCCCCCCCCHHHHH-HHHHHHHHHCCCCCCE
Q ss_conf 99999740212354433665012-233458985310011220268-64444210122003467-8889989641556531
Q gi|254780497|r 60 ARDALHHAEMSVDDIDLIIVATS-TPDQTFPSTAVNIQNRLGMKR-GFAFDMQAVCSGFVYAV-TTADSYIRSGVVRRVM 136 (324)
Q Consensus 60 a~~al~~a~~~~~~Id~ii~~s~-~~~~~~p~~a~~i~~~LGl~~-~~~~di~~~C~~~~~al-~~A~~li~~g~~~~~L 136 (324)
+++.+.+.|++++.| .+++-- .+.+..+.....+.+++|+++ ....=|.+|=.|.+..+ .++..+..... -.++
T Consensus 158 ~k~~l~~~Gv~~~kI--~vtGiPVr~~F~~~~~k~~~r~~lgL~~d~~~vLimgGg~G~~g~i~~l~~~L~~~~~-~qii 234 (388)
T PRK13609 158 VKEVMVDIGVPAEQI--VETGIPIRSSFELKINPDIIYNKYQLCKNKKILLIVAGAHGVLGNVKELCQSFMSVPD-LQVV 234 (388)
T ss_pred HHHHHHHHCCCHHHE--EEECCCCCHHHCCCCCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCC-CEEE
T ss_conf 999999809988899--9889843878727588789999828998784799976601211479999999745899-2499
Q ss_pred EEEECC
Q ss_conf 676302
Q gi|254780497|r 137 VIGSDT 142 (324)
Q Consensus 137 vv~~e~ 142 (324)
|||+-+
T Consensus 235 VVcGrN 240 (388)
T PRK13609 235 VVCGKN 240 (388)
T ss_pred EEECCC
T ss_conf 990899
No 266
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=43.40 E-value=24 Score=15.63 Aligned_cols=28 Identities=11% Similarity=0.107 Sum_probs=18.7
Q ss_pred EEEEEEEEECCCCEECHHHHHHHHCCCHHH
Q ss_conf 699999996498411788999880999878
Q gi|254780497|r 4 STVRGIGLSLPRRVLSNSDLESIVDTSDGW 33 (324)
Q Consensus 4 ~~I~~~g~ylP~~~v~~~el~~~~~~~~~~ 33 (324)
..|..+.-|.|...+ ++++++++..++.
T Consensus 9 ~~~~~~~~y~~g~~~--~~~a~~~g~~~~~ 36 (369)
T PRK00950 9 AIVKEIKEYVPGKSK--EEIARNYGIDPES 36 (369)
T ss_pred HHHHCCCCCCCCCCH--HHHHHHCCCCCCC
T ss_conf 886379998999999--9999980989689
No 267
>KOG1015 consensus
Probab=43.37 E-value=17 Score=16.62 Aligned_cols=91 Identities=13% Similarity=0.208 Sum_probs=55.4
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEE----ECCC--CCCCCCCCCCCHHHHHHCCCCCCCCCCCC
Q ss_conf 75188982898899999999999999740212354433665----0122--33458985310011220268644442101
Q gi|254780497|r 39 GISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIV----ATST--PDQTFPSTAVNIQNRLGMKRGFAFDMQAV 112 (324)
Q Consensus 39 GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~----~s~~--~~~~~p~~a~~i~~~LGl~~~~~~di~~~ 112 (324)
+|++-.+.++++.+-.-+++.-+.++.+ +.|-+++-|=| |..+ .-.-.|+..+.+++-+||..++ +
T Consensus 641 ~it~~lVld~deet~e~~VqV~rslv~k--LKpHQv~GvqFMwd~~~eSlkr~~~~~GsGcILAHcMGLGKTl--Q---- 712 (1567)
T KOG1015 641 PITTKLVLDEDEETKEPLVQVHRSLVIK--LKPHQVDGVQFMWDCCCESLKRTKKSPGSGCILAHCMGLGKTL--Q---- 712 (1567)
T ss_pred CCCEEEEECCHHHHCCCHHHCCHHHHHH--CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEE--H----
T ss_conf 5310378544143042202145767764--4722013025899999999886127998631778750456400--1----
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf 22003467888998964155653167630
Q gi|254780497|r 113 CSGFVYAVTTADSYIRSGVVRRVMVIGSD 141 (324)
Q Consensus 113 C~~~~~al~~A~~li~~g~~~~~Lvv~~e 141 (324)
-..|++.+.+... . ..++||||+.=
T Consensus 713 VvtflhTvL~c~k---l-g~ktaLvV~Pl 737 (1567)
T KOG1015 713 VVTFLHTVLLCDK---L-GFKTALVVCPL 737 (1567)
T ss_pred HHHHHHHHHHHHC---C-CCCEEEEECCH
T ss_conf 4678889987420---4-78568997235
No 268
>PRK11921 metallo-beta-lactamase/flavodoxin domain-containing protein; Provisional
Probab=42.46 E-value=24 Score=15.54 Aligned_cols=19 Identities=26% Similarity=0.534 Sum_probs=16.1
Q ss_pred CCCCCCCEEEEECCCCCCC
Q ss_conf 1235443366501223345
Q gi|254780497|r 69 MSVDDIDLIIVATSTPDQT 87 (324)
Q Consensus 69 ~~~~~Id~ii~~s~~~~~~ 87 (324)
++|++||.||..+.-||..
T Consensus 65 i~~~~IdYiVvnH~EPDHs 83 (395)
T PRK11921 65 IDLDKIDYIVANHGEIDHS 83 (395)
T ss_pred CCCCCCCEEEECCCCCCHH
T ss_conf 5965699999389997578
No 269
>KOG2708 consensus
Probab=42.28 E-value=17 Score=16.49 Aligned_cols=91 Identities=20% Similarity=0.348 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCC-CCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC----
Q ss_conf 99999999740212354433665012233458985-3100112202686444421012200346788899896415----
Q gi|254780497|r 57 EAAARDALHHAEMSVDDIDLIIVATSTPDQTFPST-AVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGV---- 131 (324)
Q Consensus 57 ~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~-a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~---- 131 (324)
.--++++|++++++++|||.+.|.. -|..-.|-. .+.+++-|-+ -|.--+.+...+-..|+.|+
T Consensus 54 l~Lv~~al~ea~v~~~diD~icyTK-GPGmgaPL~~vaivaRtlsl----------lw~kPlv~VNHCigHIEMGR~iTg 122 (336)
T KOG2708 54 LGLVKQALEEAGVTSDDIDCICYTK-GPGMGAPLSVVAIVARTLSL----------LWNKPLVGVNHCIGHIEMGREITG 122 (336)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEECC-CCCCCCCHHHHHHHHHHHHH----------HHCCCCCCCHHHHHHHHHCCEECC
T ss_conf 9999999987399752287899727-89878762668999999999----------827983230121111322102216
Q ss_pred -CC-CCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf -56-531676302243222456632323454
Q gi|254780497|r 132 -VR-RVMVIGSDTFSRIVDWSDRSTCVLFGD 160 (324)
Q Consensus 132 -~~-~~Lvv~~e~~S~~~d~~d~~~~~lfGD 160 (324)
.+ .+|-|++-+ +..+-|+.+. +-+||.
T Consensus 123 A~nPvvLYvSGGN-TQvIAYse~r-YrIFGE 151 (336)
T KOG2708 123 AQNPVVLYVSGGN-TQVIAYSEKR-YRIFGE 151 (336)
T ss_pred CCCCEEEEEECCC-EEEEEECCCE-EEEECC
T ss_conf 8897799990796-6999971541-454032
No 270
>PRK05452 anaerobic nitric oxide reductase flavorubredoxin; Provisional
Probab=40.78 E-value=26 Score=15.38 Aligned_cols=20 Identities=30% Similarity=0.635 Sum_probs=16.8
Q ss_pred CCCCCCCCEEEEECCCCCCC
Q ss_conf 21235443366501223345
Q gi|254780497|r 68 EMSVDDIDLIIVATSTPDQT 87 (324)
Q Consensus 68 ~~~~~~Id~ii~~s~~~~~~ 87 (324)
-+++++||.||..+.-||..
T Consensus 66 ~id~~~IDYIIvnH~EpDHS 85 (479)
T PRK05452 66 EIDLADIDYIVINHAEEDHA 85 (479)
T ss_pred HCCCCCCCEEEECCCCCCHH
T ss_conf 45966798899689997547
No 271
>TIGR01485 SPP_plant-cyano sucrose phosphatase; InterPro: IPR012847 This entry describes the sucrose phosphate phosphohydrolase from plants and cyanobacteria (SPP). However, a closely related group of sequences from bacteria and archaea may prove to catalyze the same reaction. SPP is a member of the Class IIB subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain, which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain..
Probab=38.98 E-value=28 Score=15.20 Aligned_cols=53 Identities=19% Similarity=0.422 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHHHHCCC-------CCCCCCCCCCCCH-HHHHHHHHHCCCC---HHHHHH
Q ss_conf 4557777777888898740010-------0012102444441-5899999971978---767336
Q gi|254780497|r 221 KYAVEKAVELIEKVFDSTHLTI-------ENIDWFVPHQANW-RIINSIVDKMKIP---FDKVIV 274 (324)
Q Consensus 221 ~~~~~~~~~~i~~~L~~~gl~~-------~did~~~~Hq~~~-~~~~~~~~~lgl~---~e~~~~ 274 (324)
+.....+.+.+.+.|++.|+.. .|+| ++||-+++ ..+..+.++|.+. |+++..
T Consensus 131 ~~~~~~V~~~L~~~L~~~g~~vk~iYSsG~dlD-ilP~~s~KG~A~~YL~~kL~~~GK~p~~TlV 194 (257)
T TIGR01485 131 KEAAAEVIKQLEEELKKSGLDVKLIYSSGKDLD-ILPQGSGKGQALQYLLQKLKIEGKQPSQTLV 194 (257)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEE-EECCCCCHHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 565468999899888742897589975882377-5027788567999999999843889777178
No 272
>cd04333 ProX_deacylase This CD, composed mainly of bacterial single-domain proteins, includes the Thermus thermophilus (Tt) YbaK-like protein, a homolog of the trans-acting Escherichia coli YbaK Cys-tRNA(Pro) deacylase and the Agrobacterium tumefaciens ProX Ala-tRNA(Pro) deacylase and also the cis-acting prolyl-tRNA synthetase-editing domain (ProRS-INS). While ProX and ProRS-INS hydrolyze misacylated Ala-tRNA(Pro), the E. coli YbaK hydrolyzes misacylated Cys-tRNA(Pro). A few CD members are N-terminal, YbaK-ProX-like domains of an uncharacterized protein with a C-terminal, predicted Fe-S protein domain.
Probab=38.96 E-value=26 Score=15.32 Aligned_cols=10 Identities=20% Similarity=0.202 Sum_probs=3.7
Q ss_pred HHHHHHHHCC
Q ss_conf 9999974021
Q gi|254780497|r 60 ARDALHHAEM 69 (324)
Q Consensus 60 a~~al~~a~~ 69 (324)
+++.|++.|+
T Consensus 4 v~~~L~~~gi 13 (148)
T cd04333 4 VRAFLAARGL 13 (148)
T ss_pred HHHHHHHCCC
T ss_conf 9999997699
No 273
>pfam12244 DUF3606 Protein of unknown function (DUF3606). This family of proteins is found in bacteria. Proteins in this family are typically between 58 and 85 amino acids in length. There is a single completely conserved residue G that may be functionally important.
Probab=38.85 E-value=28 Score=15.19 Aligned_cols=42 Identities=7% Similarity=0.054 Sum_probs=30.3
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCH
Q ss_conf 01000121024444415899999971978767336586519330
Q gi|254780497|r 240 LTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHGNTS 283 (324)
Q Consensus 240 l~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~ 283 (324)
..+.|-+++-+++ ..-.+.|+++||+++++.-.-+...||..
T Consensus 7 ~~~~Dr~~I~~~e--~~ev~yW~~~~gvt~~~L~~AV~~vG~~~ 48 (57)
T pfam12244 7 RGPQDRSRINLNE--EYEVKYWAKRLGVSEEQLKAAVRKVGNSA 48 (57)
T ss_pred CCCCCHHHCCCCC--HHHHHHHHHHHCCCHHHHHHHHHHHCCCH
T ss_conf 5887423067675--89999999997949999999999988569
No 274
>PRK12342 putative electron transfer flavoprotein YdiQ; Provisional
Probab=38.65 E-value=28 Score=15.17 Aligned_cols=11 Identities=0% Similarity=-0.170 Sum_probs=6.7
Q ss_pred CCCEEEEECCC
Q ss_conf 65316763022
Q gi|254780497|r 133 RRVMVIGSDTF 143 (324)
Q Consensus 133 ~~~Lvv~~e~~ 143 (324)
.+=||+++...
T Consensus 109 ~~DLVl~G~~s 119 (254)
T PRK12342 109 GFDLLLFGEGS 119 (254)
T ss_pred CCCEEEEECCC
T ss_conf 96999993621
No 275
>PRK03910 D-cysteine desulfhydrase; Validated
Probab=38.41 E-value=28 Score=15.14 Aligned_cols=32 Identities=25% Similarity=0.401 Sum_probs=27.3
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCEEEEEEECC
Q ss_conf 30126999999999806889998999999714
Q gi|254780497|r 282 TSAASIPLALAVAVKEGRVKKGDCLLLEAMGG 313 (324)
Q Consensus 282 ~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~ 313 (324)
++++-.+.+|.+++++|.+.+|++|+++=.|.
T Consensus 287 vYTgKa~~gl~~li~~g~i~~g~~Vv~ihTGG 318 (331)
T PRK03910 287 VYTGKAMAGLIDLIRKGRFKDGGNVLFIHTGG 318 (331)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
T ss_conf 26799999999999849989989299998996
No 276
>TIGR00014 arsC arsenate reductase; InterPro: IPR006659 This entry describes a distinct clade, including ArsC itself, of the broader family of ArsC and related proteins. This clade is almost completely restricted to the proteobacteria. An anion-translocating ATPase has been identified as the product of the arsenical resistance operon of resistance plasmid R773 . When expressed in Escherichia coli this ATP-driven oxyanion pump catalyses extrusion of the oxyanions arsenite, antimonite and arsenate. The pump is composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate. ; GO: 0008794 arsenate reductase (glutaredoxin) activity, 0006118 electron transport.
Probab=38.04 E-value=29 Score=15.11 Aligned_cols=44 Identities=9% Similarity=0.211 Sum_probs=34.8
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHH-HHH
Q ss_conf 788889874001000121024444415899999971978767-336
Q gi|254780497|r 230 LIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDK-VIV 274 (324)
Q Consensus 230 ~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~-~~~ 274 (324)
..-.+|++.|+.|+=|.| +=.|++++-++.+.++||+++-| ...
T Consensus 14 ~tLalL~dkgi~P~vV~Y-L~~pp~~seL~~~~~~LG~~~ar~~~R 58 (114)
T TIGR00014 14 QTLALLEDKGIEPEVVKY-LKNPPTKSELKALLAKLGISSAREMIR 58 (114)
T ss_pred HHHHHHHHCCCCCEEEEC-CCCCCCHHHHHHHHHHCCCCHHHHHCC
T ss_conf 999999856999547414-589748688999998708970363011
No 277
>TIGR01341 aconitase_1 aconitate hydratase 1; InterPro: IPR006249 Aconitase (aconitate hydratase; 4.2.1.3 from EC) is an iron-sulphur protein that contains a [4Fe-4S]-cluster and catalyses the interconversion of isocitrate and citrate via a cis-aconitate intermediate. Aconitase functions in both the TCA and glyoxylate cycles, however unlike the majority of iron-sulphur proteins that function as electron carriers, the [4Fe-4S]-cluster of aconitase reacts directly with an enzyme substrate. In eukaryotes there is a cytosolic form (cAcn) and a mitochondrial form (mAcn) of the enzyme. In bacteria there are also 2 forms, aconitase A (AcnA) and B (AcnB). Several aconitases are known to be multi-functional enzymes with a second non-catalytic, but essential function that arises when the cellular environment changes, such as when iron levels drop , . Eukaryotic cAcn and mAcn, and bacterial AcnA have the same domain organisation, consisting of three N-terminal alpha/beta/alpha domains, a linker region, followed by a C-terminal 'swivel' domain with a beta/beta/alpha structure (1-2-3-linker-4), although mAcn is small than cAcn. However, bacterial AcnB has a different organisation: it contains an N-terminal HEAT-like domain, followed by the 'swivel' domain, then the three alpha/beta/alpha domains (HEAT-4-1-2-3) . Below is a description of some of the multi-functional activities associated with different aconitases. Eukaryotic mAcn catalyses the second step of the mitochondrial TCA cycle, which is important for energy production, providing high energy electrons in the form of NADH and FADH2 to the mitochondrial oxidative phosphorylation pathway . The TCA cycle also provides precursors for haem and amino acid production. This enzyme has a second, non-catalytic but essential role in mitochondrial DNA (mtDNA) maintenance: mAcn acts to stabilise mtDNA, forming part of mtDNA protein-DNA complexes known as nucleoids. mAcn is thought to reversibly model nucleoids to directly influence mitochondrial gene expression in response to changes in the cellular environment. Therefore, mAcn can influence the expression of components of the oxidative phosphorylation pathway encoded in mtDNA. Eukaryotic cAcn enzyme balances the amount of citrate and isocitrate in the cytoplasm, which in turn creates a balance between the amount of NADPH generated from isocitrate by isocitrate dehydrogenase with the amount of acetyl-CoA generated from citrate by citrate lyase. Fatty acid synthesis requires both NADPH and acetyl-CoA, as do other metabolic processes, including the need for NADPH to combat oxidative stress. The enzymatic form of cAcn predominates when iron levels are normal, but if they drop sufficiently to cause the disassembly of the [4Fe-4S]-cluster, then cAcn undergoes a conformational change from a compact enzyme to a more open L-shaped protein known as iron regulatory protein 1 (IRP1; or IRE-binding protein 1, IREBP1) , . As IRP1, the catalytic site and the [4Fe-4S]-cluster are lost, and two new RNA-binding sites appear. IRP1 functions in the post-transcriptional regulation of genes involved in iron metabolism - it binds to mRNA iron-responsive elements (IRE), 30-nucleotide stem-loop structures at the 3' or 5' end of specific transcripts. Transcripts containing an IRE include ferritin L and H subunits (iron storage), transferrin (iron plasma chaperone), transferrin receptor (iron uptake into cells), ferroportin (iron exporter), mAcn, succinate dehydrogenase, erythroid aminolevulinic acid synthetase (tetrapyrrole biosynthesis), among others. If the IRE is in the 5'-UTR of the transcript (e.g. in ferritin mRNA), then IRP1-binding prevents its translation by blocking the transcript from binding to the ribosome. If the IRE is in the 3'-UTR of the transcript (e.g. transferrin receptor), then IRP1-binding protects it from endonuclease degradation, thereby prolonging the half-life of the transcript and enabling it to be translated . IRP2 is another IRE-binding protein that binds to the same transcripts as IRP1. However, since IRP1 is predominantly in the enzymatic cAcn form, it is IRP2 that acts as the major metabolic regulator that maintains iron homeostasis . Although IRP2 is homologous to IRP1, IPR2 lacks aconitase activity, and is known only to have a single function in the post-transcriptional regulation of iron metabolism genes . In iron-replete cells, IRP2 activity is regulated primarily by iron-dependent degradation through the ubiquitin-proteasomal system. Bacterial AcnB is also known to be multi-functional. In addition to its role in the TCA cycle, AcnB was shown to be a post-transcriptional regulator of gene expression in Escherichia coli and Salmonella enterica , . In S.enterica, AcnB initiates a regulatory cascade controlling flagella biosynthesis through an interaction with the ftsH transcript, an alternative RNA polymerase sigma factor. This binding lowers the intracellular concentration of FtsH protease, which in turn enhances the amount of RNA polymerase sigma32 factor (normally degraded by FtsH protease), and sigma32 then increases the synthesis of chaperone DnaK, which in turn promotes the synthesis of the flagellar protein FliC. AcnB regulates the synthesis of other proteins as well, such as superoxide dismutase (SodA) and other enzymes involved in oxidative stress. This entry represents bacterial aconitase A (AcnA), eukaryotic cytosolic aconitase (cAcn/IRP1), iron regulatory protein 2 (IRP2), and a few mitochondrial aconitases (certain mAcn proteins, but not the majority of these enzymes). More information about these proteins can be found at Protein of the Month: Aconitase .; GO: 0051539 4 iron 4 sulfur cluster binding, 0008152 metabolic process.
Probab=37.67 E-value=29 Score=15.07 Aligned_cols=70 Identities=21% Similarity=0.257 Sum_probs=44.8
Q ss_pred CCEECHHHHHHHHCCCHHHHHHCCCCCEE--EEECCCC----CHHHHHHHHHHHHHHHHCCCCCC------CCEEEEECC
Q ss_conf 84117889998809998781102475188--9828988----99999999999999740212354------433665012
Q gi|254780497|r 15 RRVLSNSDLESIVDTSDGWIKRRVGISRR--HIAGKDE----TTASLGEAAARDALHHAEMSVDD------IDLIIVATS 82 (324)
Q Consensus 15 ~~~v~~~el~~~~~~~~~~i~~~~GI~~R--~~~~~~e----~~~~la~~Aa~~al~~a~~~~~~------Id~ii~~s~ 82 (324)
+..|+.+|++.+.++..+..++. -|..| ||.=.|= -.+||| |.|+++++-|-||+- +|+||=+|+
T Consensus 39 G~~i~~eD~e~i~~W~~~~~~d~-Ei~FkP~RV~mQDFTGVPAVVDLA--~mR~am~~LGgDp~kINP~vPVDLVIDHSV 115 (896)
T TIGR01341 39 GFSIKEEDVEAILKWKKEELKDV-EIAFKPARVVMQDFTGVPAVVDLA--AMRDAMKNLGGDPEKINPLVPVDLVIDHSV 115 (896)
T ss_pred CCCCCHHHHHHHHCCCCCCCCCC-CCCCCCCEEEEECCCCCCHHHHHH--HHHHHHHHHCCCCCCCCCCCCCCEEECCCE
T ss_conf 84206789988844311354661-467564136752437872788889--999999982788120488765233775606
Q ss_pred CCCCC
Q ss_conf 23345
Q gi|254780497|r 83 TPDQT 87 (324)
Q Consensus 83 ~~~~~ 87 (324)
.=|+.
T Consensus 116 QVD~~ 120 (896)
T TIGR01341 116 QVDYY 120 (896)
T ss_pred EECCC
T ss_conf 75456
No 278
>COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]
Probab=37.20 E-value=28 Score=15.15 Aligned_cols=12 Identities=33% Similarity=0.772 Sum_probs=5.3
Q ss_pred CCCCCCCCCCHH
Q ss_conf 444210122003
Q gi|254780497|r 106 AFDMQAVCSGFV 117 (324)
Q Consensus 106 ~~di~~~C~~~~ 117 (324)
.+|+..+|.|..
T Consensus 76 ~~~~v~v~~g~~ 87 (328)
T COG4977 76 PIDILPVCGGLG 87 (328)
T ss_pred CCEEEEEECCCC
T ss_conf 632999806877
No 279
>pfam01411 tRNA-synt_2c tRNA synthetases class II (A). Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only alanyl-tRNA synthetases.
Probab=36.98 E-value=30 Score=15.00 Aligned_cols=21 Identities=10% Similarity=0.199 Sum_probs=11.7
Q ss_pred HHHHH-HHHCCCCCCCCEEEEE
Q ss_conf 99999-7402123544336650
Q gi|254780497|r 60 ARDAL-HHAEMSVDDIDLIIVA 80 (324)
Q Consensus 60 a~~al-~~a~~~~~~Id~ii~~ 80 (324)
+-+.| +.-+++|++|-..++.
T Consensus 102 a~e~lt~~l~i~~~~l~~t~~~ 123 (545)
T pfam01411 102 AWELLTKELGLDPERLYVTVYE 123 (545)
T ss_pred HHHHHHHHHCCCHHHEEEEECC
T ss_conf 9999765617886676999888
No 280
>pfam11294 DUF3095 Protein of unknown function (DUF3095). Some members in this bacterial family of proteins are annotated as adenylyl cyclase however this cannot be confirmed. Currently no function is known.
Probab=36.70 E-value=8.7 Score=18.39 Aligned_cols=16 Identities=19% Similarity=0.260 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHCCCCC
Q ss_conf 6788899896415565
Q gi|254780497|r 119 AVTTADSYIRSGVVRR 134 (324)
Q Consensus 119 al~~A~~li~~g~~~~ 134 (324)
+|..|...|+.+++..
T Consensus 146 GL~~AE~~mK~~~~~i 161 (373)
T pfam11294 146 GLAWAEALIKAGEYLI 161 (373)
T ss_pred CHHHHHHHHHCCCCCC
T ss_conf 1899999971577457
No 281
>TIGR02684 dnstrm_HI1420 probable addiction module antidote protein; InterPro: IPR014057 Members of this strictly bacterial protein family are small, at roughly 100 amino acids. The gene is almost invariably the downstream member of a gene pair. It is a predicted DNA-binding protein from a clade within the helix-turn-helix family IPR001387 from INTERPRO. These gene pairs, when found on the bacterial chromosome, are located often with prophage regions, but also both in integrated plasmid regions and in housekeeping gene regions. Analysis suggests that the gene pair may serve as an addiction module..
Probab=36.48 E-value=26 Score=15.42 Aligned_cols=64 Identities=14% Similarity=0.103 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHH
Q ss_conf 7777778888987400100012102444441589999997197876733658651933012699
Q gi|254780497|r 225 EKAVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIVTVDIHGNTSAASIP 288 (324)
Q Consensus 225 ~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~ 288 (324)
+.+...+.+++++.|=+|.-|-+-+-+=+-.+-+.+++++-||..|..+.-+..=||=.=.+++
T Consensus 15 E~~a~YL~~a~e~gGdDp~~~~~ALG~iArArGMtqlA~~tGlsREsLYkALs~~GnP~f~T~l 78 (91)
T TIGR02684 15 EEVAEYLAQALEDGGDDPALIAAALGVIARARGMTQLAKKTGLSRESLYKALSGGGNPTFDTIL 78 (91)
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHH
T ss_conf 8999999999743699988999998899865165789998287678878873568895668889
No 282
>cd01781 AF6_RA_repeat2 The AF-6 protein (also known as afadin and canoe) is a multidomain cell junction protein that contains two N-terminal Ras-associating (RA) domains in addition to FHA (forkhead-associated), DIL (class V myosin homology region), and PDZ domains and a proline-rich region. AF6 acts downstream of the Egfr (Epidermal Growth Factor-receptor)/Ras signalling pathway and provides a link from Egfr to cytoskeletal elements.
Probab=35.60 E-value=19 Score=16.28 Aligned_cols=30 Identities=10% Similarity=0.179 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 777777888898740010001210244444
Q gi|254780497|r 225 EKAVELIEKVFDSTHLTIENIDWFVPHQAN 254 (324)
Q Consensus 225 ~~~~~~i~~~L~~~gl~~~did~~~~Hq~~ 254 (324)
.....++.++|++.|++.+|-+.|++.+.+
T Consensus 26 d~A~~vV~EaLekYgL~kedp~~YcLv~V~ 55 (100)
T cd01781 26 DNADRIVGEALEKYGLEKSDPDDYCLVEVS 55 (100)
T ss_pred CCHHHHHHHHHHHHCCCCCCHHHEEEEEEE
T ss_conf 569999999999848895882026999974
No 283
>TIGR02249 integrase_gron integron integrase; InterPro: IPR011946 Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family that also includes recombinases XerC (IPR011931 from INTERPRO) and XerD (IPR011932 from INTERPRO), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961.; GO: 0003677 DNA binding, 0006310 DNA recombination, 0015074 DNA integration.
Probab=35.43 E-value=26 Score=15.36 Aligned_cols=63 Identities=10% Similarity=0.095 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHCCCCC----CCC-CCCCCC-CHHHHHHHHHHCCCC---HHHHHHHHHHHCCCHHHHHH
Q ss_conf 7777788889874001000----121-024444-415899999971978---76733658651933012699
Q gi|254780497|r 226 KAVELIEKVFDSTHLTIEN----IDW-FVPHQA-NWRIINSIVDKMKIP---FDKVIVTVDIHGNTSAASIP 288 (324)
Q Consensus 226 ~~~~~i~~~L~~~gl~~~d----id~-~~~Hq~-~~~~~~~~~~~lgl~---~e~~~~~~~~~Gn~~sas~~ 288 (324)
.+...++++-.++|+.+.= +=| |.+|-. ++.-++.+++.||=. .-++++-+=+-|-.|--||+
T Consensus 246 ~~QRav~~Av~~AGI~KpvTcHTLRHSFATHLLe~G~DIRTVQelLGHsDVkTTqIYTHVL~rG~~GV~SPL 317 (320)
T TIGR02249 246 TIQRAVRRAVERAGIEKPVTCHTLRHSFATHLLESGADIRTVQELLGHSDVKTTQIYTHVLNRGAAGVLSPL 317 (320)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCEECCCC
T ss_conf 432899999995789886788742122443056517736789886178842246345305145876205831
No 284
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=34.82 E-value=22 Score=15.83 Aligned_cols=69 Identities=19% Similarity=0.278 Sum_probs=30.5
Q ss_pred HHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCC-CCCCC
Q ss_conf 81102475188982898899999999999999740212354433665012233458985310011220268644-44210
Q gi|254780497|r 33 WIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFA-FDMQA 111 (324)
Q Consensus 33 ~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~-~di~~ 111 (324)
.+.+.+|.+.---...+.+++.||. .-.|+.|. |-||+-+ +..++++.-|. ..|+++.++ .|-..
T Consensus 39 ~~a~~~g~~~av~v~sgT~AL~lal-------~~l~i~~g--deVivp~----~tf~at~~ai~-~~Ga~pvfvDid~~t 104 (375)
T PRK11706 39 WLEQRFGCAKVLLTPSCTAALEMAA-------LLLDIQPG--DEVIMPS----YTFVSTANAFV-LRGAKIVFVDIRPDT 104 (375)
T ss_pred HHHHHHCCCEEEEECCHHHHHHHHH-------HHCCCCCC--CEEEECC----CCHHHHHHHHH-HCCCEEEEEEECCCC
T ss_conf 9999978493999678899999999-------98698893--9999899----66499999999-839969999716875
Q ss_pred CCCC
Q ss_conf 1220
Q gi|254780497|r 112 VCSG 115 (324)
Q Consensus 112 ~C~~ 115 (324)
.|..
T Consensus 105 ~~id 108 (375)
T PRK11706 105 MNID 108 (375)
T ss_pred CCCC
T ss_conf 7767
No 285
>PRK03321 putative aminotransferase; Provisional
Probab=34.77 E-value=32 Score=14.78 Aligned_cols=67 Identities=12% Similarity=0.187 Sum_probs=28.9
Q ss_pred EEEEEEEECCCCEECHH-HH---HHHHCCCHHHHH---HCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE
Q ss_conf 99999996498411788-99---988099987811---024751889828988999999999999997402123544336
Q gi|254780497|r 5 TVRGIGLSLPRRVLSNS-DL---ESIVDTSDGWIK---RRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLI 77 (324)
Q Consensus 5 ~I~~~g~ylP~~~v~~~-el---~~~~~~~~~~i~---~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~i 77 (324)
-|..+..|.|.+.++.. +| +.-++.++..++ +... .-.+|.+ ....+|-.+-++ ..+++|++| +
T Consensus 8 ~i~~l~~Y~pg~~~~~~i~ls~Nenp~gp~p~v~~ai~~~~~-~~~~YPd--~~~~~Lr~aiA~----~~~v~~~~I--~ 78 (352)
T PRK03321 8 ELAGLPAYVPGKTVPGAIKLSSNETPFGPLPSVRAAIAEATD-GLNRYPD--NGAVELRAALAE----HLGVAPEHV--A 78 (352)
T ss_pred HHHCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHH-HCCCCCC--CCHHHHHHHHHH----HHCCCHHHE--E
T ss_conf 651799989989999937802969999988999999998653-0677989--986999999999----878785879--9
Q ss_pred EEE
Q ss_conf 650
Q gi|254780497|r 78 IVA 80 (324)
Q Consensus 78 i~~ 80 (324)
+.+
T Consensus 79 v~n 81 (352)
T PRK03321 79 VGC 81 (352)
T ss_pred ECC
T ss_conf 874
No 286
>PRK13929 rod-share determining protein MreBH; Provisional
Probab=34.62 E-value=32 Score=14.82 Aligned_cols=74 Identities=8% Similarity=0.108 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHHHHHH--HCCCCCCCC-CCCCCCCH---HHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 4455777777788889874--001000121-02444441---58999999719787673365865193301269999999
Q gi|254780497|r 220 FKYAVEKAVELIEKVFDST--HLTIENIDW-FVPHQANW---RIINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALAV 293 (324)
Q Consensus 220 ~~~~~~~~~~~i~~~L~~~--gl~~~did~-~~~Hq~~~---~~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~~ 293 (324)
.+..+..+.+.++++|+++ .+..+.+|. +++-=++- .+.+.+.+.+++|.....+-.+-.. .|++-..=.++.
T Consensus 251 ~~~~~~~i~~~i~~~L~~~~pel~~di~d~gIvLvGG~srip~i~~~l~~~~~~~v~~~~nP~~~Va-~GAa~~~~~i~~ 329 (335)
T PRK13929 251 MRESLLHILEAIRATLEDCPPELSGDIVDRGVILTGGGALLNGIKEWLSQEIVVPVHVAANPLESVA-IGTGRSLEVIDK 329 (335)
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH-HHHHHHHHHHHH
T ss_conf 9999999999999999838843325432782999774043267999999997819877988676799-989999976999
Q ss_pred H
Q ss_conf 9
Q gi|254780497|r 294 A 294 (324)
Q Consensus 294 ~ 294 (324)
+
T Consensus 330 ~ 330 (335)
T PRK13929 330 L 330 (335)
T ss_pred H
T ss_conf 9
No 287
>PRK02947 hypothetical protein; Provisional
Probab=33.97 E-value=17 Score=16.50 Aligned_cols=15 Identities=20% Similarity=0.173 Sum_probs=8.1
Q ss_pred CCCCCCHHHHHHCCC
Q ss_conf 985310011220268
Q gi|254780497|r 89 PSTAVNIQNRLGMKR 103 (324)
Q Consensus 89 p~~a~~i~~~LGl~~ 103 (324)
|..+..+.+...+.+
T Consensus 93 ~g~a~~il~~~~i~~ 107 (247)
T PRK02947 93 EGYAKLILDRYPIRP 107 (247)
T ss_pred CCHHHHHHHHCCCCC
T ss_conf 509999998679999
No 288
>PTZ00122 phosphoglycerate mutase; Provisional
Probab=33.74 E-value=33 Score=14.67 Aligned_cols=73 Identities=15% Similarity=0.114 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH-HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCE
Q ss_conf 777788889874001000121024444415899999971978767336-5865193301269999999998068899989
Q gi|254780497|r 227 AVELIEKVFDSTHLTIENIDWFVPHQANWRIINSIVDKMKIPFDKVIV-TVDIHGNTSAASIPLALAVAVKEGRVKKGDC 305 (324)
Q Consensus 227 ~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~-~~~~~Gn~~sas~~~~L~~~~~~g~l~~Gd~ 305 (324)
+..+++.-.-+..-+-+..+.+++| +| -+.-.+++.|.+|++.+.. .+.+.|=| --.+.|..+
T Consensus 213 IEaAFrkYFhRp~~~~DsyeiiVcH-aN-VIRYfvcRALQlPpeaWLR~sl~h~sIT--------------wi~I~p~G~ 276 (296)
T PTZ00122 213 INKAYETYFYKPGGSEDEYQLVICH-GN-VIRYFLCRALQYPLFAWLRFSSYNCGIT--------------WLVLDDEGS 276 (296)
T ss_pred HHHHHHHHCCCCCCCCCCEEEEEEE-HH-HHHHHHHHHHCCCHHHHEEECCCCCCEE--------------EEEECCCCC
T ss_conf 9999997613788888737999840-27-8999999986188066245013787559--------------999848996
Q ss_pred EEEEEEC-CCC
Q ss_conf 9999971-450
Q gi|254780497|r 306 LLLEAMG-GGF 315 (324)
Q Consensus 306 vll~~~G-~G~ 315 (324)
|.+-++| +|+
T Consensus 277 Vslr~lGd~Gh 287 (296)
T PTZ00122 277 VVLREFGSVGH 287 (296)
T ss_pred EEEEEECCCCC
T ss_conf 89998267678
No 289
>PRK13980 NAD synthetase; Provisional
Probab=33.56 E-value=34 Score=14.65 Aligned_cols=121 Identities=18% Similarity=0.241 Sum_probs=53.7
Q ss_pred HCCCCCEEEEECC-CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
Q ss_conf 0247518898289-889999999999999974021235443366501223345898531001122026864444210122
Q gi|254780497|r 36 RRVGISRRHIAGK-DETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCS 114 (324)
Q Consensus 36 ~~~GI~~R~~~~~-~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~ 114 (324)
+++|.+.--+--. +-+++-.|+-| .+|| .|+.+-.|..-+..........|..+++.||++ ....||+..+.
T Consensus 24 ~~~g~kg~VlGlSGGIDSavva~La-~~Al-----g~~~v~~v~mP~~~ss~~s~~dA~~la~~lgi~-~~~i~I~~~~~ 96 (264)
T PRK13980 24 EKAGFKGVVLGLSGGIDSAVVAYLA-VKAL-----GKENVLALLMPYRVSPPEDLEDALLVAERLGIE-YKVIEITPIVD 96 (264)
T ss_pred HHHCCCEEEEECCCCHHHHHHHHHH-HHHC-----CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCC-EEEEECHHHHH
T ss_conf 9809980999798688899999999-9854-----966068998989999887899999999986998-49982799999
Q ss_pred CHHHHHHHHHHH----H----------HHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 003467888998----9----------6415565316763022432224566323234544312344
Q gi|254780497|r 115 GFVYAVTTADSY----I----------RSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGDGAGALIL 167 (324)
Q Consensus 115 ~~~~al~~A~~l----i----------~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGDGAaA~ll 167 (324)
++...+.....+ + .-....+.||++..+.|-.. -.-+..+|||++.+..
T Consensus 97 ~~~~~~~~~~~~~~~NiqaR~Rm~~Ly~~An~~~~lVlgTgNksE~~----~Gy~TkyGD~~~d~~P 159 (264)
T PRK13980 97 AFFSAVPDADRLRRGNIMARTRMVLLYDYANRDNRLVLGTSNKSELL----LGYFTKYGDGAVDINP 159 (264)
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHH----HHHCCCCCCCCCCHHH
T ss_conf 99986310006688875898999999998643397765588674798----7210016876656245
No 290
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=33.09 E-value=34 Score=14.60 Aligned_cols=83 Identities=23% Similarity=0.376 Sum_probs=48.4
Q ss_pred CCEEEEEEEEEECCCCEECHHHHHHHHCCCHHHHHH---CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE
Q ss_conf 922699999996498411788999880999878110---24751889828988999999999999997402123544336
Q gi|254780497|r 1 MIRSTVRGIGLSLPRRVLSNSDLESIVDTSDGWIKR---RVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLI 77 (324)
Q Consensus 1 M~~~~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~---~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~i 77 (324)
||++-|..+|.-+=.-.+- +.+..||.+ ..|+.=++..--+.+..++ .++.+.+++++ |+|
T Consensus 1 ~~~a~iI~vG~ElL~G~iv--------dtNa~~la~~L~~~G~~v~~~~~VgD~~~~I-~~~l~~a~~r~-------D~v 64 (255)
T COG1058 1 MMKAEIIAVGDELLSGRIV--------DTNAAFLADELTELGVDLARITTVGDNPDRI-VEALREASERA-------DVV 64 (255)
T ss_pred CCEEEEEEECCCEECCCEE--------CCHHHHHHHHHHHCCCEEEEEEECCCCHHHH-HHHHHHHHHCC-------CEE
T ss_conf 9358999971422147403--------4229999999996496189999639999999-99999997189-------989
Q ss_pred EEECC---CCCCCCCCCCCCHHHHHHCC
Q ss_conf 65012---23345898531001122026
Q gi|254780497|r 78 IVATS---TPDQTFPSTAVNIQNRLGMK 102 (324)
Q Consensus 78 i~~s~---~~~~~~p~~a~~i~~~LGl~ 102 (324)
|+..- |+|++ ++--+++.||.+
T Consensus 65 I~tGGLGPT~DDi---T~e~vAka~g~~ 89 (255)
T COG1058 65 ITTGGLGPTHDDL---TAEAVAKALGRP 89 (255)
T ss_pred EECCCCCCCCCHH---HHHHHHHHHCCC
T ss_conf 9879858996276---899999982998
No 291
>KOG4230 consensus
Probab=32.88 E-value=35 Score=14.58 Aligned_cols=20 Identities=25% Similarity=0.325 Sum_probs=9.1
Q ss_pred HHHHHHHHHHCCCCCCCCEEE
Q ss_conf 999999974021235443366
Q gi|254780497|r 58 AAARDALHHAEMSVDDIDLII 78 (324)
Q Consensus 58 ~Aa~~al~~a~~~~~~Id~ii 78 (324)
+||++.++.+. ++..|+++=
T Consensus 286 eaAKR~r~es~-~~~~i~~~p 305 (935)
T KOG4230 286 EAAKRQREESK-KKRKIDLLP 305 (935)
T ss_pred HHHHHHHHHCC-CCCCCCCCC
T ss_conf 99999987424-667688875
No 292
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase; InterPro: IPR010237 This family of proteins includes the SDT1/SSM1 gene from yeast, which has been shown to code for a pyrimidine (UMP/CMP) 5'nucleotidase. The family spans plants, fungi and bacteria. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily..
Probab=30.68 E-value=28 Score=15.20 Aligned_cols=21 Identities=0% Similarity=0.031 Sum_probs=9.2
Q ss_pred CCCHHHHHHHHHHCC-CCHHHH
Q ss_conf 444158999999719-787673
Q gi|254780497|r 252 QANWRIINSIVDKMK-IPFDKV 272 (324)
Q Consensus 252 q~~~~~~~~~~~~lg-l~~e~~ 272 (324)
=|+....+.+++..+ ++++|.
T Consensus 161 KP~~~ay~~~~~~~~~vd~~~~ 182 (205)
T TIGR01993 161 KPSPEAYEKALREAGVVDPERA 182 (205)
T ss_pred CCCHHHHHHHHHHHCCCCCCCE
T ss_conf 8888999999998558872001
No 293
>TIGR02365 dha_L_ycgS dihydroxyacetone kinase, L subunit; InterPro: IPR012737 Two types of dihydroxyacetone kinase (glycerone kinase) are described. In yeast and a few bacteria, e.g. Citrobacter freundii, the enzyme is a single chain that uses ATP as phosphoryl donor and is designated 2.7.1.29 from EC. By contract, Escherichia coli and many other bacterial species have a multisubunit form (2.7.1 from EC) with a phosphoprotein donor related to PTS transport proteins. The sequences in this entry represent the subunit homologous to the E. coli YcgS subunit..
Probab=30.57 E-value=23 Score=15.74 Aligned_cols=14 Identities=36% Similarity=0.292 Sum_probs=5.3
Q ss_pred HCCC--HHHHHHHHHH
Q ss_conf 1933--0126999999
Q gi|254780497|r 279 HGNT--SAASIPLALA 292 (324)
Q Consensus 279 ~Gn~--~sas~~~~L~ 292 (324)
+||. |+.|..+-|.
T Consensus 181 iGH~DPGA~SS~~~~~ 196 (200)
T TIGR02365 181 IGHIDPGATSSYLLLN 196 (200)
T ss_pred CCCCCCHHHHHHHHHH
T ss_conf 4550816789999999
No 294
>cd03749 proteasome_alpha_type_1 proteasome_alpha_type_1. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming an elongated alpha-beta-beta-alpha cylinder with a central cavity. The proteasome alpha and beta subunits are members of the N-terminal nucleophile (Ntn)-hydrolase superfamily. Their N-terminal threonine residues are exposed as a nucleophile in peptide bond hydrolysis. Mammals have 7 alpha and 7 beta proteasome subunits while archaea have one of each.
Probab=30.00 E-value=39 Score=14.28 Aligned_cols=30 Identities=17% Similarity=0.359 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHH-HHCCCCCCCCCC
Q ss_conf 445577777778888987-400100012102
Q gi|254780497|r 220 FKYAVEKAVELIEKVFDS-THLTIENIDWFV 249 (324)
Q Consensus 220 ~~~~~~~~~~~i~~~L~~-~gl~~~did~~~ 249 (324)
.+.+++...+.+.+.+.. ..++.++|+-.+
T Consensus 179 ~eeav~lA~~aL~~~~~~~~~l~~~~ieiav 209 (211)
T cd03749 179 LEELIKHALRALRETLPGEQELTIKNVSIAI 209 (211)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
T ss_conf 9999999999999985166764867359999
No 295
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases; InterPro: IPR005958 This entry describes tyrosine aminotransferase (2.6.1.5 from EC) as found in animals and Trypanosoma cruzi (Euglenozoa). It is the first enzyme of a pathway of tyrosine degradation via homogentisate. L-tyrosine + 2-oxoglutarate = 4-hydroxyphenylpyruvate + L-glutamate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway are included in this family. ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding, 0006519 amino acid and derivative metabolic process.
Probab=29.84 E-value=36 Score=14.50 Aligned_cols=79 Identities=22% Similarity=0.190 Sum_probs=44.0
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC--CCCCCCHH------HHHHCCCCCCCCCCCCCCCHHHHH
Q ss_conf 8899999999999999740212354433665012233458--98531001------122026864444210122003467
Q gi|254780497|r 49 DETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTF--PSTAVNIQ------NRLGMKRGFAFDMQAVCSGFVYAV 120 (324)
Q Consensus 49 ~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~--p~~a~~i~------~~LGl~~~~~~di~~~C~~~~~al 120 (324)
.-.+..-|.+|+.++++-...+- |+++.+ .+. -+.|.+.. +++ ++-+.-|=..=|+|..+||
T Consensus 53 ~lrT~~ea~~Av~~al~Sg~~Ng-------Yap~~G-~~~AR~AvA~y~~~sfvhn~~~--~~~l~a~DV~ltsGCsqAI 122 (424)
T TIGR01265 53 NLRTAPEAEEAVKDALRSGKFNG-------YAPSVG-ALAAREAVAEYLSNSFVHNQRL--PGKLSADDVVLTSGCSQAI 122 (424)
T ss_pred CCCCCHHHHHHHHHHHHCCCCCC-------CCCCCC-HHHHHHHHHHHHHCCEEECCCC--CCCCCCCCEEEECCCHHHH
T ss_conf 88887899999999983478567-------664368-6788899999966222125788--8875766448847722689
Q ss_pred HHHHHHHHHCCCCCCEE
Q ss_conf 88899896415565316
Q gi|254780497|r 121 TTADSYIRSGVVRRVMV 137 (324)
Q Consensus 121 ~~A~~li~~g~~~~~Lv 137 (324)
+++-.-|+..+..|+||
T Consensus 123 e~~I~aLA~~pG~NILv 139 (424)
T TIGR01265 123 EIVIEALAQNPGANILV 139 (424)
T ss_pred HHHHHHHHCCCCCCEEC
T ss_conf 99999972689883556
No 296
>PRK06851 hypothetical protein; Provisional
Probab=29.63 E-value=39 Score=14.24 Aligned_cols=55 Identities=15% Similarity=0.299 Sum_probs=32.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHH--------CCCCCCCCEEEEEC--------CCCCCCCCCCCCCHHHHHHC
Q ss_conf 898899999999999999740--------21235443366501--------22334589853100112202
Q gi|254780497|r 47 GKDETTASLGEAAARDALHHA--------EMSVDDIDLIIVAT--------STPDQTFPSTAVNIQNRLGM 101 (324)
Q Consensus 47 ~~~e~~~~la~~Aa~~al~~a--------~~~~~~Id~ii~~s--------~~~~~~~p~~a~~i~~~LGl 101 (324)
+|+.--++|-.+-+++.+++. ..||+.+|.|+.-. +.|....|..-.-|-+-+++
T Consensus 39 GpGtGKStlmK~ig~~~~~~GydVE~~hcssD~~SlDGvvip~lk~aivDGTaPHvvdP~~PGaveeiInL 109 (368)
T PRK06851 39 GPGTGKSTLMKKIGEEFLEKGYDVEFLHCSSDNDSLDGVIIPELKIAILDGTAPHVVDPKAPGAVEEIINL 109 (368)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEEH
T ss_conf 99977899999999999968983799975899886435997578779974888766589999843479777
No 297
>PRK11678 putative chaperone; Provisional
Probab=29.54 E-value=39 Score=14.23 Aligned_cols=18 Identities=28% Similarity=0.541 Sum_probs=7.8
Q ss_pred HHHHHHCCCCCCCCEEEEE
Q ss_conf 9999980688999899999
Q gi|254780497|r 291 LAVAVKEGRVKKGDCLLLE 309 (324)
Q Consensus 291 L~~~~~~g~l~~Gd~vll~ 309 (324)
++.++++..++| |.|+|+
T Consensus 389 ~~~~L~~Ag~~~-D~V~lv 406 (450)
T PRK11678 389 VQLALDQAQVKP-DVIYLT 406 (450)
T ss_pred HHHHHHHCCCCC-CEEEEC
T ss_conf 999999759999-989984
No 298
>TIGR00011 YbaK_EbsC ybaK/ebsC protein; InterPro: IPR004369 The family includes P36922 from SWISSPROT, a protein which affects the expression of a receptor called binding substance, that mediates mating aggregate formation in Enterococcus faecalis . It was suggested that this may be a regulatory protein that suppresses the function or expression of ebsA and/or ebsMB. A crystallographic study of another member of this family, P45202 from SWISSPROT from Haemophilus influenzae, (HI1434, YbaK) suggests that these proteins could be involved in nucleotide or oligonucleotide binding .; GO: 0006355 regulation of transcription DNA-dependent.
Probab=29.28 E-value=29 Score=15.11 Aligned_cols=47 Identities=15% Similarity=0.144 Sum_probs=18.8
Q ss_pred HHHHCCCCCEEEEE-CCCCCHHHHHHHHHHHHHHHHCCCCCCC--CEEEEECCC
Q ss_conf 81102475188982-8988999999999999997402123544--336650122
Q gi|254780497|r 33 WIKRRVGISRRHIA-GKDETTASLGEAAARDALHHAEMSVDDI--DLIIVATST 83 (324)
Q Consensus 33 ~i~~~~GI~~R~~~-~~~e~~~~la~~Aa~~al~~a~~~~~~I--d~ii~~s~~ 83 (324)
++.++-||...-+. +-|+....-+.++|+. -|.+|++| .+|+.....
T Consensus 5 r~L~~~kI~y~~~~Y~~d~~~~~~g~~~A~~----lG~~~~~VfKTLv~~~~~~ 54 (156)
T TIGR00011 5 RLLDKAKIEYEVHEYEVDPDHDLDGESAAEK----LGVDPERVFKTLVAEGDKK 54 (156)
T ss_pred HHHHHCCCCEEEECCCCCCCCCHHHHHHHHH----HCCCCCEEEEEEEEEECCC
T ss_conf 8899619956872135699886158999998----2998110688889960789
No 299
>TIGR00454 TIGR00454 conserved hypothetical protein TIGR00454; InterPro: IPR005245 This entry describes a family of conserved hypothetical proteins with no known function. .
Probab=29.06 E-value=40 Score=14.18 Aligned_cols=65 Identities=25% Similarity=0.361 Sum_probs=50.0
Q ss_pred CCEEEEECCCCCCCCCCCCCCHHHHHHC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf 4336650122334589853100112202-686444421012200346788899896415565316763022
Q gi|254780497|r 74 IDLIIVATSTPDQTFPSTAVNIQNRLGM-KRGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTF 143 (324)
Q Consensus 74 Id~ii~~s~~~~~~~p~~a~~i~~~LGl-~~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~ 143 (324)
+|-||..| +| .+|.|-.+|+.+-.- ++....|-+++ |.+-=++-+.+.++..=..+.||+++|..
T Consensus 44 V~~ii~~T-SP--hTP~Te~y~~~~~~~~~~ivvidasGk--GYiEDl~E~~~hlE~~~~EP~lV~ssDl~ 109 (204)
T TIGR00454 44 VDNIIVVT-SP--HTPKTEEYVAEKYKEYKRIVVIDASGK--GYIEDLREVLSHLELAFSEPLLVVSSDLV 109 (204)
T ss_pred CCEEEEEE-CC--CCCCCHHHHHHCCCEEEEEEEEECCCC--CCHHHHHHHHHHHHHHHCCCEEEEECCHH
T ss_conf 75379983-77--797637887305850457889976999--60252789999877663398578743602
No 300
>PRK07475 hypothetical protein; Provisional
Probab=28.82 E-value=40 Score=14.15 Aligned_cols=70 Identities=17% Similarity=0.102 Sum_probs=35.1
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 9999999999999974021235443366501223345898531001122026-864444210122003467888998964
Q gi|254780497|r 51 TTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQAVCSGFVYAVTTADSYIRS 129 (324)
Q Consensus 51 ~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~li~~ 129 (324)
...+--++|++++ ++.|.+. |. ++++ ++ +..|++|... +.+.+ +|.+..+-....++..
T Consensus 63 ~~l~~fi~Aa~~L-~~~G~~a-----It--tsCG-FL-----a~~Q~eLa~a~~vPV~------tSSLlQvP~v~~~l~~ 122 (243)
T PRK07475 63 ALLDAFIAAAQEL-VAEGVRA-----IT--TSCG-FL-----ALFQKELAAAVGVPVA------TSSLLQVPLIQALLPP 122 (243)
T ss_pred HHHHHHHHHHHHH-HHCCCCE-----EE--ECCC-CH-----HHHHHHHHHHHCCCHH------HHHHHHHHHHHHHCCC
T ss_conf 8999999999999-9759889-----98--6550-32-----9899999997199614------5268779999987089
Q ss_pred CCCCCCEEEEECC
Q ss_conf 1556531676302
Q gi|254780497|r 130 GVVRRVMVIGSDT 142 (324)
Q Consensus 130 g~~~~~Lvv~~e~ 142 (324)
+ +++-|++.+.
T Consensus 123 ~--~~vGIlT~~a 133 (243)
T PRK07475 123 G--QRVGILTASA 133 (243)
T ss_pred C--CEEEEEEECH
T ss_conf 9--8579999614
No 301
>cd03752 proteasome_alpha_type_4 proteasome_alpha_type_4. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming an elongated alpha-beta-beta-alpha cylinder with a central cavity. The proteasome alpha and beta subunits are members of the N-terminal nucleophile (Ntn)-hydrolase superfamily. Their N-terminal threonine residues are exposed as a nucleophile in peptide bond hydrolysis. Mammals have 7 alpha and 7 beta proteasome subunits while archaea have one of each.
Probab=28.36 E-value=41 Score=14.10 Aligned_cols=28 Identities=36% Similarity=0.514 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 4557777777888898740010001210
Q gi|254780497|r 221 KYAVEKAVELIEKVFDSTHLTIENIDWF 248 (324)
Q Consensus 221 ~~~~~~~~~~i~~~L~~~gl~~~did~~ 248 (324)
+.+++...+.+.+.+++..++.++|+-.
T Consensus 184 eeai~lai~al~~~~~~~~~~~~~iei~ 211 (213)
T cd03752 184 EEALALAVKVLSKTMDSTKLTSEKLEFA 211 (213)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf 9999999999999970436888857999
No 302
>pfam02540 NAD_synthase NAD synthase. NAD synthase (EC:6.3.5.1) is involved in the de novo synthesis of NAD and is induced by stress factors such as heat shock and glucose limitation.
Probab=27.93 E-value=39 Score=14.27 Aligned_cols=29 Identities=17% Similarity=0.388 Sum_probs=17.0
Q ss_pred CCCCHHHHHHCCCCCCCCCCCCCCCHHHHH
Q ss_conf 531001122026864444210122003467
Q gi|254780497|r 91 TAVNIQNRLGMKRGFAFDMQAVCSGFVYAV 120 (324)
Q Consensus 91 ~a~~i~~~LGl~~~~~~di~~~C~~~~~al 120 (324)
.|-.+++.||++. ...||+....++...+
T Consensus 64 ~A~~la~~lgi~~-~~i~I~~~~~~~~~~~ 92 (243)
T pfam02540 64 DALALAENLGINY-KTIDIKPIVRAFSQLF 92 (243)
T ss_pred HHHHHHHHHCCCE-EEEECHHHHHHHHHHH
T ss_conf 9999999968926-9998889999999885
No 303
>COG0245 IspF 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Lipid metabolism]
Probab=27.52 E-value=42 Score=14.01 Aligned_cols=56 Identities=20% Similarity=0.249 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCC-C-----HHHHHHHHHHCCCCHHHHH---HHHHHHCCCH
Q ss_conf 77788889874001000121024444-4-----1589999997197876733---6586519330
Q gi|254780497|r 228 VELIEKVFDSTHLTIENIDWFVPHQA-N-----WRIINSIVDKMKIPFDKVI---VTVDIHGNTS 283 (324)
Q Consensus 228 ~~~i~~~L~~~gl~~~did~~~~Hq~-~-----~~~~~~~~~~lgl~~e~~~---~~~~~~Gn~~ 283 (324)
.+...+.+.+.|+....+|-.+.-|. . ..|.+.+++.|+++.+++. .+-++.|-+|
T Consensus 77 L~~~~~~v~~~g~~i~Nvd~tii~~~PK~~P~~~amr~~ia~~L~i~~~~invKatT~E~LGf~G 141 (159)
T COG0245 77 LKEAVELVREKGYRIGNVDITIIAQRPKLGPYREAMRANIAELLGIPVDRINVKATTTEKLGFTG 141 (159)
T ss_pred HHHHHHHHHHHCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHEEEEEECCCCCCCCC
T ss_conf 99999999985968876889999726766504999999999985999211478985367655556
No 304
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=27.45 E-value=43 Score=14.00 Aligned_cols=40 Identities=25% Similarity=0.273 Sum_probs=31.1
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf 8982898899999999999999740212354433665012
Q gi|254780497|r 43 RHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATS 82 (324)
Q Consensus 43 R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~ 82 (324)
.+...-...-++.....++++|.++++++.|||.|.++.-
T Consensus 28 ~~~~~~~r~hse~l~~~i~~ll~~~~~~~~dld~Iav~~G 67 (220)
T COG1214 28 EHTEKLKRNHAERLMPMIDELLKEAGLSLQDLDAIAVAKG 67 (220)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECC
T ss_conf 9997158328899999999999875999778488999308
No 305
>PRK12390 1-aminocyclopropane-1-carboxylate deaminase; Provisional
Probab=27.31 E-value=43 Score=13.98 Aligned_cols=32 Identities=19% Similarity=0.327 Sum_probs=27.0
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCEEEEEEECC
Q ss_conf 30126999999999806889998999999714
Q gi|254780497|r 282 TSAASIPLALAVAVKEGRVKKGDCLLLEAMGG 313 (324)
Q Consensus 282 ~~sas~~~~L~~~~~~g~l~~Gd~vll~~~G~ 313 (324)
++++-.+..|-+++++|.+.+|++|+++=.|.
T Consensus 293 VYTgKa~~GL~~~i~~g~~~~g~~VlfiHTGG 324 (337)
T PRK12390 293 VYEGKSMHGMIDLVRKGEFPEGSKVLYAHLGG 324 (337)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
T ss_conf 37899999999999769989999089998987
No 306
>KOG1359 consensus
Probab=26.83 E-value=32 Score=14.80 Aligned_cols=89 Identities=17% Similarity=0.201 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEECCC-CCCC---------------CCCC--CCC-HHHHHHCCCCCCCCCCCCCCCH
Q ss_conf 9999999997402123544336650122-3345---------------8985--310-0112202686444421012200
Q gi|254780497|r 56 GEAAARDALHHAEMSVDDIDLIIVATST-PDQT---------------FPST--AVN-IQNRLGMKRGFAFDMQAVCSGF 116 (324)
Q Consensus 56 a~~Aa~~al~~a~~~~~~Id~ii~~s~~-~~~~---------------~p~~--a~~-i~~~LGl~~~~~~di~~~C~~~ 116 (324)
-.+|.+++|+..|.-++.+.++. ++.+ .-.+ +|+. |++ +...+--+....|+=.-.|+|-
T Consensus 86 ii~a~~~aleeyGaGlssvrfIc-Gtq~iHk~LE~kiAqfh~rED~ilypscfdANag~feail~pedAvfSDeLNhASI 164 (417)
T KOG1359 86 IINAGQKALEEYGAGLSSVRFIC-GTQDIHKLLESKIAQFHGREDTILYPSCFDANAGAFEAILTPEDAVFSDELNHASI 164 (417)
T ss_pred HHHHHHHHHHHHCCCCCCEEEEE-CCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCHHHHHHCCCCCCCHH
T ss_conf 88989999998287864316884-45579999999999870877548733100344377877448254121000022034
Q ss_pred HHHHHHHHHH------------HHHCCCCCCEEEEECCCCC
Q ss_conf 3467888998------------9641556531676302243
Q gi|254780497|r 117 VYAVTTADSY------------IRSGVVRRVMVIGSDTFSR 145 (324)
Q Consensus 117 ~~al~~A~~l------------i~~g~~~~~Lvv~~e~~S~ 145 (324)
+-+++++..+ +.+-..+.-||+.-..+|.
T Consensus 165 IdGirLckry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSM 205 (417)
T KOG1359 165 IDGIRLCKRYRHVDVFDLEHCLISACKMRLKLVVTDGVFSM 205 (417)
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEECCEECC
T ss_conf 32467776644512677888777743321799985461214
No 307
>TIGR00417 speE spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (), spermine synthase () and putrescine N-methyltransferase () . The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain . The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) . ; GO: 0003824 catalytic activity.
Probab=26.78 E-value=32 Score=14.76 Aligned_cols=47 Identities=11% Similarity=0.163 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCHHHHHHHHHHCCCCHHH
Q ss_conf 77777788889874001000-121024444415899999971978767
Q gi|254780497|r 225 EKAVELIEKVFDSTHLTIEN-IDWFVPHQANWRIINSIVDKMKIPFDK 271 (324)
Q Consensus 225 ~~~~~~i~~~L~~~gl~~~d-id~~~~Hq~~~~~~~~~~~~lgl~~e~ 271 (324)
+..-+.+.++|++.|+=..+ =+-.++|+.-..=+...++..+++.-.
T Consensus 175 ~~Fy~~~~~aL~~~Gv~v~Qss~s~~~~~~~~~d~~r~~~~~~F~~~~ 222 (284)
T TIGR00417 175 KEFYELLKKALNEDGVIVAQSSESPWLQLELIKDLKRKVKEVPFPITE 222 (284)
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCE
T ss_conf 799999998529998899802788432748888788877526897530
No 308
>PRK10222 L-ascorbate-specific enzyme IIB component of PTS; Provisional
Probab=26.73 E-value=38 Score=14.29 Aligned_cols=10 Identities=30% Similarity=0.328 Sum_probs=3.3
Q ss_pred CCCHHHHHHH
Q ss_conf 9330126999
Q gi|254780497|r 280 GNTSAASIPL 289 (324)
Q Consensus 280 Gn~~sas~~~ 289 (324)
|.+++.||.+
T Consensus 30 ~~l~~~DIIV 39 (85)
T PRK10222 30 SELSGADIII 39 (85)
T ss_pred CCCCCCCEEE
T ss_conf 3467777898
No 309
>TIGR00329 gcp metalloendopeptidase, putative, glycoprotease family; InterPro: IPR000905 Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site . The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases . Peptidases are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry. Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues . Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 , . Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion , . Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis . The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region .; GO: 0008450 O-sialoglycoprotein endopeptidase activity, 0006508 proteolysis.
Probab=26.08 E-value=45 Score=13.84 Aligned_cols=41 Identities=22% Similarity=0.344 Sum_probs=27.0
Q ss_pred HHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCC--CCHHHHHHC
Q ss_conf 9999997402123544336650122334589853--100112202
Q gi|254780497|r 59 AARDALHHAEMSVDDIDLIIVATSTPDQTFPSTA--VNIQNRLGM 101 (324)
Q Consensus 59 Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a--~~i~~~LGl 101 (324)
=..+||++++++.+|||+|-|.. -| -+.|+.- ..+++-|=+
T Consensus 60 L~~~Al~~~~~~~~~I~~IA~t~-~P-GL~g~L~vGat~Ar~La~ 102 (337)
T TIGR00329 60 LLERALKESNVDISEIDLIAVTS-GP-GLGGALIVGATFARSLAL 102 (337)
T ss_pred HHHHHHHHHCCCCCCCCEEEEEC-CC-CCCCHHHHHHHHHHHHHH
T ss_conf 99999998288701025789855-87-985146899999999989
No 310
>pfam02685 Glucokinase Glucokinase. This is a family of glucokinases or glucose kinases EC:2.7.1.2. These enzymes phosphorylate glucose using ATP as a donor to give glucose-6-phosphate and ADP.
Probab=25.71 E-value=46 Score=13.80 Aligned_cols=48 Identities=19% Similarity=0.123 Sum_probs=27.0
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEECCCCC--------CCCCCC-CCCHHHHHHCCCCC
Q ss_conf 9999999740212354433665012233--------458985-31001122026864
Q gi|254780497|r 58 AAARDALHHAEMSVDDIDLIIVATSTPD--------QTFPST-AVNIQNRLGMKRGF 105 (324)
Q Consensus 58 ~Aa~~al~~a~~~~~~Id~ii~~s~~~~--------~~~p~~-a~~i~~~LGl~~~~ 105 (324)
++.++.|++.+....+++..+++-.-|- ++-|.. ...|.+++|++++.
T Consensus 40 ~~l~~~l~~~~~~~~~~~~~~~avAGPv~~~~~~lTN~~W~i~~~~l~~~~g~~~v~ 96 (316)
T pfam02685 40 EALQDYLAEADAGVARPRHACFAVAGPVDGDEVRLTNLPWVISIEELRAALGLDAVH 96 (316)
T ss_pred HHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEECCCCEECHHHHHHHHCCCEEE
T ss_conf 999999984686667867699998677539978874786065599999972998599
No 311
>pfam01890 CbiG_C Cobalamin synthesis G C-terminus. Members of this family are involved in cobalamin synthesis. A member from Synechocystis sp. PCC 6803 has been designated cbiH but in fact represents a fusion between cbiH and cbiG. As other multi-functional proteins involved in cobalamin biosynthesis catalyse adjacent steps in the pathway, including CysG, CobL (CbiET), CobIJ and CobA-HemD, it is therefore possible that CbiG catalyses a reaction step adjacent to CbiH. In the anaerobic pathway such a step could be the formation of a gamma lactone, which is thought to help to mediate the anaerobic ring contraction process. Within the cobalamin synthesis pathway CbiG catalyses the both the opening of the lactone ring and the extrusion of the two-carbon fragment of cobalt-precorrin-5A from C-20 and its associated methyl group (deacylation) to give cobalt-precorrin-5B. This family is the C-terminal region, and the mid- and N-termival parts are conserved independently in other families.
Probab=25.49 E-value=46 Score=13.77 Aligned_cols=43 Identities=12% Similarity=0.170 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCC--CHHHHHHHHHHCCCC
Q ss_conf 7777788889874001000121024444--415899999971978
Q gi|254780497|r 226 KAVELIEKVFDSTHLTIENIDWFVPHQA--NWRIINSIVDKMKIP 268 (324)
Q Consensus 226 ~~~~~i~~~L~~~gl~~~did~~~~Hq~--~~~~~~~~~~~lgl~ 268 (324)
.+...++++|++.++++++|+.+..... +..-+..+++.+|+|
T Consensus 16 ~i~~~i~~~l~~~~l~~~~i~~iasid~K~~E~gl~~~a~~l~~p 60 (121)
T pfam01890 16 EIEAAIEEALAEAGLSPEAVAAIATIDLKADEPGLLELAARLGVP 60 (121)
T ss_pred HHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 999999999998599978840568632147988999999992998
No 312
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=25.41 E-value=46 Score=13.76 Aligned_cols=49 Identities=16% Similarity=0.246 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH---HHHHHHHHCCCCHHH
Q ss_conf 5777777788889874001000121024444415---899999971978767
Q gi|254780497|r 223 AVEKAVELIEKVFDSTHLTIENIDWFVPHQANWR---IINSIVDKMKIPFDK 271 (324)
Q Consensus 223 ~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~---~~~~~~~~lgl~~e~ 271 (324)
.+....+.++.+|.++++++.||+.+++..++-+ +.+.+.+.++-++.+
T Consensus 288 ll~r~~~~~~~al~~a~l~~~~I~~VilvGGstriP~V~~~v~~~f~~~~~~ 339 (579)
T COG0443 288 LLERTIEPVEQALKDAGLEKSDIDLVILVGGSTRIPAVQELVKEFFGKEPEK 339 (579)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHCCEEEEECCEECCHHHHHHHHHHHCCCCCC
T ss_conf 9999999999999974998532766998357755666999999982877435
No 313
>pfam09887 DUF2114 Uncharacterized protein conserved in archaea (DUF2114). This domain, found in various hypothetical archaeal proteins, has no known function.
Probab=25.36 E-value=46 Score=13.76 Aligned_cols=33 Identities=24% Similarity=0.477 Sum_probs=27.9
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCC-CCCEEEEEC
Q ss_conf 889999999999999974021235-443366501
Q gi|254780497|r 49 DETTASLGEAAARDALHHAEMSVD-DIDLIIVAT 81 (324)
Q Consensus 49 ~e~~~~la~~Aa~~al~~a~~~~~-~Id~ii~~s 81 (324)
.|+..+|-.....+++++++++-+ |+|+|+-.|
T Consensus 64 resV~elVrdtl~e~~k~A~l~i~~DL~FVVRST 97 (448)
T pfam09887 64 RESVAELVRDTLLESLKKAGLDIENDLDFVVRST 97 (448)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECC
T ss_conf 8899999999999999973888655766799506
No 314
>TIGR02133 RPI_actino ribose 5-phosphate isomerase; InterPro: IPR011860 Ribose 5-phosphate isomerase (5.3.1.6 from EC) forms a homodimer and catalyses the interconversion of D-ribose 5-phosphate and D-ribulose 5-phosphate in the non-oxidative branch of the pentose phosphate pathway. This reaction permits the synthesis of ribose from other sugars, as well as the recycling of sugars from nucleotide breakdown. Two unrelated enzymes can catalyse this reaction: RpiA (found in most organisms) and RpiB (found in some bacteria and eukaryotes) . This entry represents the only candidates for ribose 5-phosphate isomerase in Actinobacteria..
Probab=25.25 E-value=47 Score=13.74 Aligned_cols=58 Identities=24% Similarity=0.386 Sum_probs=39.8
Q ss_pred EEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 9828988999999999999997402123544336650122334589853100112202686444
Q gi|254780497|r 44 HIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAF 107 (324)
Q Consensus 44 ~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~ 107 (324)
+..|++.+.+..+++||++..+...-.-.+..+||++|-.+.... |+.|. |++-++++
T Consensus 37 ~~~D~~~~YP~~~~~AA~~~a~d~~dg~~~~g~vigGsG~G~~IA---ANKVk---G~RA~lAw 94 (154)
T TIGR02133 37 HIADPDDDYPKFCIAAAERVARDETDGIADLGLVIGGSGNGEQIA---ANKVK---GIRAALAW 94 (154)
T ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHH---CCCCC---CCEEEEHH
T ss_conf 567987775168999999985684346132435771478602221---04644---40222101
No 315
>PRK00292 glk glucokinase; Provisional
Probab=24.92 E-value=47 Score=13.71 Aligned_cols=44 Identities=23% Similarity=0.258 Sum_probs=21.6
Q ss_pred HHHHHHHHHCCCCCCCCEEEEECCCC---C-----CCCCCC-CCCHHHHHHCCCCC
Q ss_conf 99999974021235443366501223---3-----458985-31001122026864
Q gi|254780497|r 59 AARDALHHAEMSVDDIDLIIVATSTP---D-----QTFPST-AVNIQNRLGMKRGF 105 (324)
Q Consensus 59 Aa~~al~~a~~~~~~Id~ii~~s~~~---~-----~~~p~~-a~~i~~~LGl~~~~ 105 (324)
+.++.|++.+.+|..+ +++-.-| + +.-|.. ...+.+++|++++.
T Consensus 43 ~l~~~l~~~~~~~~~a---~iavAGPv~~~~~~lTN~~W~i~~~~l~~~~g~~~v~ 95 (315)
T PRK00292 43 AVRVYLDEHGVQVGDA---CFAIAGPVDGDEVRMTNHHWVFSIARMAAELGLDHLL 95 (315)
T ss_pred HHHHHHHHCCCCCCEE---EEEEECCCCCCEEEEECCCCEEEHHHHHHHHCCCCEE
T ss_conf 9999998579983549---9999787539988766677375399999863988189
No 316
>PRK00084 ispF 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed
Probab=24.89 E-value=47 Score=13.70 Aligned_cols=56 Identities=21% Similarity=0.299 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCC-CC-----HHHHHHHHHHCCCCHHHHH---HHHHHHCCC
Q ss_conf 77778888987400100012102444-44-----1589999997197876733---658651933
Q gi|254780497|r 227 AVELIEKVFDSTHLTIENIDWFVPHQ-AN-----WRIINSIVDKMKIPFDKVI---VTVDIHGNT 282 (324)
Q Consensus 227 ~~~~i~~~L~~~gl~~~did~~~~Hq-~~-----~~~~~~~~~~lgl~~e~~~---~~~~~~Gn~ 282 (324)
+-+.+.+.+.+.|+.+..||..+.-| |. ..|.+.+.+.|+++.+++. .|-+..|-+
T Consensus 78 ~L~~~~~~l~~~g~~I~NiD~tii~e~PKi~p~~~~i~~~ls~lL~i~~~~IsiKatT~E~lG~i 142 (159)
T PRK00084 78 LLREVVRLLKEKGYRIGNVDVTIIAQRPKMAPHIEAMRANIAEDLGIPLDDVNVKATTTEKLGFT 142 (159)
T ss_pred HHHHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC
T ss_conf 99999999998298789703899916763279999999999999699834499999528987615
No 317
>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family; InterPro: IPR011896 A number of anaerobic and microaerophilic species lack pyruvate dehydrogenase and have instead a four subunit, oxygen-sensitive pyruvate oxidoreductase, with either ferredoxins or flavodoxins used as the acceptor. Several related four-subunit enzymes may exist in the same species. This entry describes the beta subunits, representing mostly pyruvate and 2-ketoisovalerate specific enzymes..
Probab=24.79 E-value=48 Score=13.69 Aligned_cols=86 Identities=14% Similarity=0.090 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH-HHHHHHHC-CCCHHHHHHHHHHHC---CCHHHHHHHHHHHH
Q ss_conf 44557777777888898740010001210244444158-99999971-978767336586519---33012699999999
Q gi|254780497|r 220 FKYAVEKAVELIEKVFDSTHLTIENIDWFVPHQANWRI-INSIVDKM-KIPFDKVIVTVDIHG---NTSAASIPLALAVA 294 (324)
Q Consensus 220 ~~~~~~~~~~~i~~~L~~~gl~~~did~~~~Hq~~~~~-~~~~~~~l-gl~~e~~~~~~~~~G---n~~sas~~~~L~~~ 294 (324)
|.+-+..+.+.|++++.--|...=||=.=|+. .|.-. .+.+.+++ .|..|+.++=+.+=| .-.-.=..-++.++
T Consensus 158 fs~d~~hLKeiiK~A~~H~G~AlvDiLQPCvT-yN~inT~~WY~~R~YkL~~~~gyDP~~~~Gl~p~~~e~k~~~a~~KA 236 (302)
T TIGR02177 158 FSGDVAHLKEIIKEAINHKGYALVDILQPCVT-YNKINTYEWYKERVYKLEDEEGYDPIVREGLTPEELEEKAARAIKKA 236 (302)
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC-CCCCCCHHHHHHHCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 88748999999999732898458761178887-46666657676407540168887887887558758999999999997
Q ss_pred HHCCCCCCCCEE
Q ss_conf 980688999899
Q gi|254780497|r 295 VKEGRVKKGDCL 306 (324)
Q Consensus 295 ~~~g~l~~Gd~v 306 (324)
++-|.+.|=|+|
T Consensus 237 ~EwGtidPv~rI 248 (302)
T TIGR02177 237 LEWGTIDPVDRI 248 (302)
T ss_pred HCCCCCCCCCCC
T ss_conf 247985864323
No 318
>pfam01902 ATP_bind_4 ATP-binding region. This family of proteins probably binds ATP. This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N terminus.In some members of this family, this domain is associated with pfam01042.
Probab=24.70 E-value=48 Score=13.68 Aligned_cols=68 Identities=16% Similarity=0.228 Sum_probs=32.7
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHCCCCCCE
Q ss_conf 9999999740212354433665012233458985310011220268644-442101220034678889989641556531
Q gi|254780497|r 58 AAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFA-FDMQAVCSGFVYAVTTADSYIRSGVVRRVM 136 (324)
Q Consensus 58 ~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~-~di~~~C~~~~~al~~A~~li~~g~~~~~L 136 (324)
++.++++++- +|+.++++-...+|.- .---.+++++|+..... .. ...-.+...+++.| .+ ++
T Consensus 75 ~~L~~~l~~~-----~i~~vv~GdI~s~~qr-~~~e~~c~~lgl~~~~PLW~--------~d~~~ll~e~i~~G-f~-ai 138 (219)
T pfam01902 75 EDLAGFLESL-----DVDALVAGAIYSEYQK-SRIESVCRELGLKPFAPLWG--------RDPRKLAEEIVREG-FE-VA 138 (219)
T ss_pred HHHHHHHHHC-----CCCEEEECCCCCHHHH-HHHHHHHHHCCCEEEECCCC--------CCHHHHHHHHHHCC-CE-EE
T ss_conf 9999999875-----9869999860368899-99999999729889710348--------99999999999879-94-99
Q ss_pred EEEEC
Q ss_conf 67630
Q gi|254780497|r 137 VIGSD 141 (324)
Q Consensus 137 vv~~e 141 (324)
||+.+
T Consensus 139 Iv~v~ 143 (219)
T pfam01902 139 IVAVS 143 (219)
T ss_pred EEEEE
T ss_conf 99985
No 319
>TIGR01693 UTase_glnD protein-P-II uridylyltransferase; InterPro: IPR010043 This entry describes GlnD, the uridylyltransferase/uridylyl-removing enzyme for signal-transduction protein PII, and acts as the sensory component of the nitrogen regulation (ntr) system . The ntr system modulates nitrogen metabolism in response to the prevailing nitrogen source and the requirements of the cell. During nitrogen fixation, ammonia and 2-oxoglutarate can be used to produce glutamate. The activity of the PII protein is stimulated by glutamine and inhibited by 2-oxoglutarate. Under glutamate-limiting conditions, PII is uridylylated by GlnD leading to the activation of glutamate synthetase and to the stimulation of NtrC-dependent promoters. Under high concentrations of fixed nitrogen, PII is de-uridylylated leading to the inactivation of the glutamate synthetase pathway and switching off NtrC-dependent promoters . Not all homologues of PII share the property of uridylyltransferase modification on the characteristic Tyr residue (see IPR002332 from INTERPRO), but the modification site is preserved in the PII homologue of all species with a member of this family. ; GO: 0008773 [protein-PII] uridylyltransferase activity, 0006807 nitrogen compound metabolic process.
Probab=23.72 E-value=50 Score=13.56 Aligned_cols=52 Identities=23% Similarity=0.369 Sum_probs=27.8
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCCCEEE--------EE-CC-CCCCCCCCCCCCHHHHHH
Q ss_conf 889999999999999974021235443366--------50-12-233458985310011220
Q gi|254780497|r 49 DETTASLGEAAARDALHHAEMSVDDIDLII--------VA-TS-TPDQTFPSTAVNIQNRLG 100 (324)
Q Consensus 49 ~e~~~~la~~Aa~~al~~a~~~~~~Id~ii--------~~-s~-~~~~~~p~~a~~i~~~LG 100 (324)
+.+=+.++++-|++.=.+-|+++.++++|. .. |. -+|-.-|.+-..+++++|
T Consensus 511 gGDHs~~GA~~A~~~C~R~GL~~~~~~~vawLVr~HLlmS~tAqRRDl~DP~tv~~FA~~v~ 572 (903)
T TIGR01693 511 GGDHSVLGAEDARDVCQRLGLDRPDTELVAWLVRNHLLMSITAQRRDLNDPETVFAFAEAVG 572 (903)
T ss_pred CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHC
T ss_conf 96688985999999987538898899999999860032542100015897389999999836
No 320
>TIGR01393 lepA GTP-binding protein LepA; InterPro: IPR006297 LepA (GUF1 in Saccaromyces) is a GTP-binding membrane protein related to EF-G and EF-Tu. Two types of phylogenetic tree, rooted by other GTP-binding proteins, suggest that eukaryotic homologs (including GUF1 of yeast) originated within the bacterial LepA family. The function of the proteins in this family are unknown. ; GO: 0005525 GTP binding.
Probab=23.37 E-value=47 Score=13.75 Aligned_cols=110 Identities=15% Similarity=0.276 Sum_probs=50.2
Q ss_pred EEEEEEECCCCEECHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC
Q ss_conf 99999964984117889998809998781102475188982898899999999999999740212354433665012233
Q gi|254780497|r 6 VRGIGLSLPRRVLSNSDLESIVDTSDGWIKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPD 85 (324)
Q Consensus 6 I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~ 85 (324)
+.-+|+..|.-.+..++|.. | .-|||. .||++-.=+.=|. +.|.+..=|+++| .|..+ +--+||++-+|-
T Consensus 235 V~evG~~~P~~~~~~~~L~a--G-eVGy~~--AgIK~v~D~~VGD-TiT~~~~Pa~epl--pGF~~--~KP~VFaGlYPi 304 (598)
T TIGR01393 235 VDEVGVFTPKLEVKTQELSA--G-EVGYII--AGIKDVSDVKVGD-TITSVKNPAKEPL--PGFKE--VKPMVFAGLYPI 304 (598)
T ss_pred EEEEEEECCCCCCCCCCEEC--C-CEEEEE--EEEEECCCEECCC-EEECCCCCCCCCC--CCCCC--CCCEEEECCCCC
T ss_conf 75500343452014662001--6-305999--8653104112054-4525678737678--88612--576586012588
Q ss_pred CCCCCCCCCHH---HHHHCC-----------CCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 45898531001---122026-----------86444421012200346788899896
Q gi|254780497|r 86 QTFPSTAVNIQ---NRLGMK-----------RGFAFDMQAVCSGFVYAVTTADSYIR 128 (324)
Q Consensus 86 ~~~p~~a~~i~---~~LGl~-----------~~~~~di~~~C~~~~~al~~A~~li~ 128 (324)
... .=-.+. ++|.|. +++.|-..+|-.|.| =|.+...-|+
T Consensus 305 d~~--~Ye~LrdALeKL~LNDAsL~yE~E~S~ALGFGFRCGFLGLL-HmEiiqERLe 358 (598)
T TIGR01393 305 DTE--DYEDLRDALEKLKLNDASLTYEPESSPALGFGFRCGFLGLL-HMEIIQERLE 358 (598)
T ss_pred CCH--HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCH-HHHHHHHHHH
T ss_conf 803--46899999755544025421022363003740433266633-6899987654
No 321
>COG2971 Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=23.33 E-value=51 Score=13.51 Aligned_cols=109 Identities=15% Similarity=0.032 Sum_probs=52.7
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 89999999999999974021235443366501223345898531001122026864444210122003467888998964
Q gi|254780497|r 50 ETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRS 129 (324)
Q Consensus 50 e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~ 129 (324)
|.+..=...|+++++.++|.+|++|+....+-..-.... ...+.+.+..++-+.-+++ |+-+..||+-+.
T Consensus 45 e~A~~ni~~ai~~A~~~aG~~~~~i~~~~agla~ag~~~--~~~~~~~~~~l~~a~~v~v---~~Dg~iAl~ga~----- 114 (301)
T COG2971 45 EEAVRNIKDAIREALDEAGLKPDEIAAIVAGLALAGANV--EEAREELERLLPFAGKVDV---ENDGLIALRGAL----- 114 (301)
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEECCCCCH--HHHHHHHHHHCCCCCEEEE---ECCHHHHHHHCC-----
T ss_conf 789999999999998762899778170124550357662--6778889873686646999---557699986132-----
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCCC------CCCCCCCCCEEEEEC
Q ss_conf 1556531676302243222456632------323454431234402
Q gi|254780497|r 130 GVVRRVMVIGSDTFSRIVDWSDRST------CVLFGDGAGALILEG 169 (324)
Q Consensus 130 g~~~~~Lvv~~e~~S~~~d~~d~~~------~~lfGDGAaA~ll~~ 169 (324)
..+...|+.+-+-|-.+-+..... .++.||=+++.-+.+
T Consensus 115 -~~~~Gii~i~GTGSi~~~~~gg~~~r~GG~Gf~IgDegSga~ig~ 159 (301)
T COG2971 115 -GDDDGIIVIAGTGSIGYGRKGGRRERVGGWGFPIGDEGSGAWIGR 159 (301)
T ss_pred -CCCCCEEEEECCCEEEEEEECCEEEEECCCCCCCCCCCHHHHHHH
T ss_conf -799878999258769999708866775686751156520779999
No 322
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=23.22 E-value=17 Score=16.62 Aligned_cols=16 Identities=13% Similarity=0.196 Sum_probs=8.9
Q ss_pred CCCCCEEEEECCCCCC
Q ss_conf 5565316763022432
Q gi|254780497|r 131 VVRRVMVIGSDTFSRI 146 (324)
Q Consensus 131 ~~~~~Lvv~~e~~S~~ 146 (324)
++..+.|+....-.|+
T Consensus 40 ~~E~V~V~Nv~NG~Rf 55 (126)
T PRK05449 40 ENEKVDIVNVNNGARF 55 (126)
T ss_pred CCCEEEEEECCCCCEE
T ss_conf 8988999989899589
No 323
>pfam07700 HNOB Heme NO binding. The HNOB (Heme NO Binding) domain, is a predominantly alpha-helical domain and binds heme via a covalent linkage to histidine. The HNOB domain is predicted to function as a heme-dependent sensor for gaseous ligands, and transduce diverse downstream signals, in both bacteria and animals.
Probab=23.18 E-value=51 Score=13.49 Aligned_cols=44 Identities=18% Similarity=0.220 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 9999999974021235443366501223345898531001122026
Q gi|254780497|r 57 EAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK 102 (324)
Q Consensus 57 ~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~ 102 (324)
.+..++.+++++++++.+ .......+|..+......+++.+|++
T Consensus 19 ~~~w~~i~~~~~~~~~~~--f~~~~~Y~D~~~~~lv~a~s~~~g~~ 62 (171)
T pfam07700 19 EDVWEQILEKAGFEPEGV--FTVHESYDDSELYDLVAAASKVLGIP 62 (171)
T ss_pred HHHHHHHHHHCCCCCCCC--EECCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 999999999729998982--51357618799999999999998929
No 324
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=23.13 E-value=49 Score=13.59 Aligned_cols=68 Identities=16% Similarity=0.087 Sum_probs=30.8
Q ss_pred HHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCC-CCCCCC
Q ss_conf 1102475188982898899999999999999740212354433665012233458985310011220268644-442101
Q gi|254780497|r 34 IKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFA-FDMQAV 112 (324)
Q Consensus 34 i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~-~di~~~ 112 (324)
+.+.+|.+.---...+.++..||.. ..|+.|. |-||+.+. ..++++.-| -..|+++.++ .|-+..
T Consensus 38 ~~~~~g~k~~v~~~sgT~AL~lal~-------al~~~~g--deVivp~~----tf~at~~ai-~~~Ga~pvf~Dvd~~t~ 103 (380)
T TIGR03588 38 LAEYVGAKYAVAFNSATSALHIACL-------ALGVGPG--DEVWTTPI----TFVATANCA-LYCGAKVDFVDIDPDTG 103 (380)
T ss_pred HHHHHCCCEEEEECCHHHHHHHHHH-------HCCCCCC--CEEEECCC----CCHHHHHHH-HHCCCEEEEEECCHHHC
T ss_conf 9999785949997588999999999-------8499998--99996785----308867999-98799689984410001
Q ss_pred CCC
Q ss_conf 220
Q gi|254780497|r 113 CSG 115 (324)
Q Consensus 113 C~~ 115 (324)
|..
T Consensus 104 ~id 106 (380)
T TIGR03588 104 NID 106 (380)
T ss_pred CCC
T ss_conf 489
No 325
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]
Probab=22.81 E-value=41 Score=14.13 Aligned_cols=43 Identities=21% Similarity=0.246 Sum_probs=25.9
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHC
Q ss_conf 88999999999999997402123544336650122334589853100112202
Q gi|254780497|r 49 DETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGM 101 (324)
Q Consensus 49 ~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl 101 (324)
++...+.-.+..++ -++|++||.||.+++-||.. +-|-+-|.+
T Consensus 53 ~~~f~~~~l~~l~~-----~id~k~iDYIi~~H~ePDhs-----g~l~~ll~~ 95 (388)
T COG0426 53 GEKFFDEYLENLSK-----YIDPKEIDYIIVNHTEPDHS-----GSLPELLEL 95 (388)
T ss_pred CCCHHHHHHHHHHH-----HCCHHCCEEEEECCCCCCHH-----HHHHHHHHH
T ss_conf 80169999999986-----34800171999788896335-----469999986
No 326
>PRK07027 cobalamin biosynthesis protein CbiG; Provisional
Probab=22.79 E-value=52 Score=13.45 Aligned_cols=42 Identities=7% Similarity=0.031 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCC--CHHHHHHHHHHCCCC
Q ss_conf 777788889874001000121024444--415899999971978
Q gi|254780497|r 227 AVELIEKVFDSTHLTIENIDWFVPHQA--NWRIINSIVDKMKIP 268 (324)
Q Consensus 227 ~~~~i~~~L~~~gl~~~did~~~~Hq~--~~~~~~~~~~~lgl~ 268 (324)
+...++++|+++|+++.+|+.+..--. +..-+..+++.+|+|
T Consensus 19 I~~ai~~~l~~~~l~~~~I~~iaSid~K~dE~gll~~a~~l~~p 62 (126)
T PRK07027 19 IEAAIRAALAQLPLASAEVRVVATLDLKADEAGLLALCARRGWP 62 (126)
T ss_pred HHHHHHHHHHHCCCCHHHHHHEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 99999999998699978811147410428989999999981998
No 327
>TIGR01120 rpiB ribose 5-phosphate isomerase B; InterPro: IPR004785 Ribose 5-phosphate isomerase (5.3.1.6 from EC) forms a homodimer and catalyses the interconversion of D-ribose 5-phosphate and D-ribulose 5-phosphate in the non-oxidative branch of the pentose phosphate pathway. This reaction permits the synthesis of ribose from other sugars, as well as the recycling of sugars from nucleotide breakdown. Two unrelated enzymes can catalyse this reaction: RpiA (found in most organisms) and RpiB (found in some bacteria and eukaryotes). RpiB is also involved in metabolism of the rare sugar, allose, in addition to ribose sugars. The structures of RpiA and RpiB are distinct, RpiB having a Rossmann-type alpha/beta/alpha sandwich topology . This entry represents the RpiB enzyme.; GO: 0004751 ribose-5-phosphate isomerase activity, 0006098 pentose-phosphate shunt.
Probab=22.77 E-value=36 Score=14.48 Aligned_cols=11 Identities=18% Similarity=0.332 Sum_probs=4.5
Q ss_pred CCCCCCHHHHH
Q ss_conf 98531001122
Q gi|254780497|r 89 PSTAVNIQNRL 99 (324)
Q Consensus 89 p~~a~~i~~~L 99 (324)
|.=|..|+.+.
T Consensus 42 P~YAk~V~~av 52 (143)
T TIGR01120 42 PDYAKEVVRAV 52 (143)
T ss_pred CHHHHHHHHHH
T ss_conf 06899999997
No 328
>COG5499 Predicted transcription regulator containing HTH domain [Transcription]
Probab=22.71 E-value=52 Score=13.44 Aligned_cols=46 Identities=22% Similarity=0.369 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCC------------HHHHHHHHHHCCCCHHHH
Q ss_conf 7777888898740010001210244444------------158999999719787673
Q gi|254780497|r 227 AVELIEKVFDSTHLTIENIDWFVPHQAN------------WRIINSIVDKMKIPFDKV 272 (324)
Q Consensus 227 ~~~~i~~~L~~~gl~~~did~~~~Hq~~------------~~~~~~~~~~lgl~~e~~ 272 (324)
-.++|+..++..|++..|+.-.+-.-.. ..+++++.+++|||.|-+
T Consensus 61 pve~I~t~Md~~glt~~dLa~~iGSks~vS~iL~~rraLTle~ikkL~q~~gIpa~~l 118 (120)
T COG5499 61 PVEVIRTLMDQYGLTLADLANEIGSKSRVSNILSGRRALTLEHIKKLHQRFGIPADVL 118 (120)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 8899999999938718888998676188999973206766999999999869588875
No 329
>PRK01584 alanyl-tRNA synthetase; Provisional
Probab=22.70 E-value=52 Score=13.43 Aligned_cols=10 Identities=30% Similarity=0.321 Sum_probs=4.0
Q ss_pred HHHCCCCCCC
Q ss_conf 7402123544
Q gi|254780497|r 65 HHAEMSVDDI 74 (324)
Q Consensus 65 ~~a~~~~~~I 74 (324)
++-|+.++.|
T Consensus 143 ~~~Gi~~~~I 152 (593)
T PRK01584 143 ESLGISKDRI 152 (593)
T ss_pred HHCCCCHHHE
T ss_conf 9819989994
No 330
>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]
Probab=22.68 E-value=36 Score=14.48 Aligned_cols=69 Identities=20% Similarity=0.251 Sum_probs=39.4
Q ss_pred HHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 01122026-864444210122003467888998964155653167630224322245663232345443123440
Q gi|254780497|r 95 IQNRLGMK-RGFAFDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSDTFSRIVDWSDRSTCVLFGDGAGALILE 168 (324)
Q Consensus 95 i~~~LGl~-~~~~~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e~~S~~~d~~d~~~~~lfGDGAaA~ll~ 168 (324)
+.+...++ +..|.=|..||+|+..||-+|....-.- +..--|++.|-|+.++ |+|..-+ -++|.++=+.
T Consensus 181 L~em~~LkvP~I~iVIGEGgSGGALAi~vad~V~mle-~s~ySVisPEG~AsIL-WkD~~ka---~eAAe~mkit 250 (317)
T COG0825 181 LREMARLKVPIISIVIGEGGSGGALAIGVADRVLMLE-NSTYSVISPEGCASIL-WKDASKA---KEAAEAMKIT 250 (317)
T ss_pred HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH-HCEEEECCHHHHHHHH-HCCHHHH---HHHHHHCCCC
T ss_conf 9998579998799996578752467765778999988-4412204731324455-2583242---9999982787
No 331
>PRK09483 response regulator; Provisional
Probab=22.53 E-value=53 Score=13.41 Aligned_cols=94 Identities=15% Similarity=0.136 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999740212354433665012233458985310011220268644442101220034678889989641556
Q gi|254780497|r 54 SLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSYIRSGVVR 133 (324)
Q Consensus 54 ~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~li~~g~~~ 133 (324)
.+-.++.+..|++. .+++.+-.+++..+.. ...+.. -++....|++.. ...++..+..+.+..+.-
T Consensus 11 ~l~r~gl~~~L~~~----~~~~vv~~a~~~~~~l------~~~~~~-~pDvvllDl~lp---~~~Gl~~~~~i~~~~p~~ 76 (216)
T PRK09483 11 ELVRAGIRRILEDI----KGIKVVGEASCGEDAV------KWCRTN-AVDVVLMDMNMP---GIGGLEATRKILRSTPDV 76 (216)
T ss_pred HHHHHHHHHHHHHC----CCCEEEEEECCHHHHH------HHHHHC-CCCEEEECCCCC---CCCCHHHHHHHHHHCCCC
T ss_conf 99999999999748----9958999989999999------999855-999999868898---987523778887408998
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 53167630224322245663232345443123440
Q gi|254780497|r 134 RVMVIGSDTFSRIVDWSDRSTCVLFGDGAGALILE 168 (324)
Q Consensus 134 ~~Lvv~~e~~S~~~d~~d~~~~~lfGDGAaA~ll~ 168 (324)
+++++++..-..... -.+..||.++|.-
T Consensus 77 ~vivls~~~~~~~~~-------~al~~Ga~gyl~K 104 (216)
T PRK09483 77 KIIMLTVHTENPLPA-------KVMQAGAAGYLSK 104 (216)
T ss_pred CEEEECCCCCHHHHH-------HHHHCCCCEEEEC
T ss_conf 578630566328899-------9997488789947
No 332
>TIGR02802 Pal_lipo peptidoglycan-associated lipoprotein; InterPro: IPR014169 Members in this entry represent the peptidoglycan-associated lipoprotein (Pal or OprL) protein of the Tol-Pal system. The system appears to be involved both in the maintenance of outer membrane integrity and in the import of certain organic molecules as nutrients. Members of this family contain a hydrodrophobic lipoprotein signal sequence, a conserved N-terminal cleavage and modification site, a poorly conserved low-complexity region, together comprising about 65 amino acids, and a well-conserved C-terminal domain. The entry represents only the conserved C-terminal domain..
Probab=22.49 E-value=53 Score=13.41 Aligned_cols=69 Identities=19% Similarity=0.267 Sum_probs=41.9
Q ss_pred HHHCCCHHHHHHCCCCCEE---EEECC---CCCHHHHH---HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 8809998781102475188---98289---88999999---99999999740212354433665012233458985310
Q gi|254780497|r 25 SIVDTSDGWIKRRVGISRR---HIAGK---DETTASLG---EAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVN 94 (324)
Q Consensus 25 ~~~~~~~~~i~~~~GI~~R---~~~~~---~e~~~~la---~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~ 94 (324)
+.+..-..|+.++..++ - -++|+ .|-.+-|+ +.|+++.|...|+.+++|..|-|+-.=|-.+.-.-+++
T Consensus 17 ~~l~~hA~~L~~~p~~~-V~iEGH~DERGTrEYNlALGeRRA~AV~~yL~~~GV~~~q~~~vSYGkErP~~~G~~E~~w 94 (104)
T TIGR02802 17 AILDAHAQYLKKNPSVR-VTIEGHTDERGTREYNLALGERRANAVKDYLQAKGVSASQIETVSYGKERPAALGHDEAAW 94 (104)
T ss_pred HHHHHHHHHHHHCCCCE-EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHH
T ss_conf 99999899998679937-8886307888887777778899999999999973896110046302665687789885777
No 333
>cd06221 sulfite_reductase_like Anaerobic sulfite reductase contains an FAD and NADPH binding module with structural similarity to ferredoxin reductase and sequence similarity to dihydroorotate dehydrogenases. Clostridium pasteurianum inducible dissimilatory type sulfite reductase is linked to ferredoxin and reduces NH2OH and SeO3 at a lesser rate than it's normal substate SO3(2-). Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+.
Probab=22.38 E-value=53 Score=13.40 Aligned_cols=55 Identities=16% Similarity=0.221 Sum_probs=30.3
Q ss_pred HHHHHHHCCCCCCCCCCC-CCCCHHHHHHHHHHCCCCHHHHHHHHHH-----HCCCHHHHH
Q ss_conf 889874001000121024-4444158999999719787673365865-----193301269
Q gi|254780497|r 233 KVFDSTHLTIENIDWFVP-HQANWRIINSIVDKMKIPFDKVIVTVDI-----HGNTSAASI 287 (324)
Q Consensus 233 ~~L~~~gl~~~did~~~~-Hq~~~~~~~~~~~~lgl~~e~~~~~~~~-----~Gn~~sas~ 287 (324)
+.|.+.....++-..+++ +++=......+++.+|+|.|+++..+++ +|-++++.+
T Consensus 179 ~~l~~~~~~~~~~~vy~CGP~pMm~av~~~l~~~GVp~e~I~vSle~~M~CG~G~C~~C~v 239 (253)
T cd06221 179 DLLPELTLDPDNTVAIVCGPPIMMRFVAKELLKLGVPEEQIWVSLERRMKCGVGKCGHCQI 239 (253)
T ss_pred HHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCHHEEEEECCCCCCCCCEECCCCCC
T ss_conf 9998737786885999939999999999999984998000799315536683605487246
No 334
>TIGR01264 tyr_amTase_E tyrosine aminotransferase; InterPro: IPR005957 This entry describes tyrosine aminotransferase (2.6.1.5 from EC) as found in animals and Trypanosoma cruzi (Euglenozoa). It is the first enzyme of a pathway of tyrosine degradation via homogentisate. L-tyrosine + 2-oxoglutarate = 4-hydroxyphenylpyruvate + L-glutamate.; GO: 0004838 tyrosine transaminase activity, 0030170 pyridoxal phosphate binding, 0009072 aromatic amino acid family metabolic process.
Probab=22.21 E-value=53 Score=13.37 Aligned_cols=84 Identities=13% Similarity=0.154 Sum_probs=42.1
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCC--CCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 88999999999999997402123--5443366501223345898531001122026864444210122003467888998
Q gi|254780497|r 49 DETTASLGEAAARDALHHAEMSV--DDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADSY 126 (324)
Q Consensus 49 ~e~~~~la~~Aa~~al~~a~~~~--~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~l 126 (324)
...+.+-..+|.+++++-...+- -.|++..-.-.--.| ..-+.|+++= ..+.+.-|=.-=|||..+||++|-.-
T Consensus 47 nL~~~~~~~~a~~~~v~S~~ynGY~p~vG~~~Ar~aia~~---y~~sfvhn~~-~~~~~~a~~Vvl~SGCS~Al~~ai~a 122 (415)
T TIGR01264 47 NLPTSEEAMQAMKESVDSGKYNGYAPTVGALEAREAIAEY---YRNSFVHNKR-PDGSIEADDVVLCSGCSHALEMAIEA 122 (415)
T ss_pred CCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH---HHHHHHCCCC-CCCCCCCCCEEECCCCHHHHHHHHHH
T ss_conf 9988889999999875256606772001348888999998---7631100236-68720127647716702789999999
Q ss_pred HHHCCCCCCEE
Q ss_conf 96415565316
Q gi|254780497|r 127 IRSGVVRRVMV 137 (324)
Q Consensus 127 i~~g~~~~~Lv 137 (324)
|+. +.+++||
T Consensus 123 ~Ad-~G~nvLV 132 (415)
T TIGR01264 123 LAD-AGQNVLV 132 (415)
T ss_pred HCC-CCCEEEC
T ss_conf 537-9780630
No 335
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=22.14 E-value=54 Score=13.36 Aligned_cols=24 Identities=13% Similarity=0.185 Sum_probs=15.3
Q ss_pred EEEEEEEEECCCCEECHHHHHHHHCC
Q ss_conf 69999999649841178899988099
Q gi|254780497|r 4 STVRGIGLSLPRRVLSNSDLESIVDT 29 (324)
Q Consensus 4 ~~I~~~g~ylP~~~v~~~el~~~~~~ 29 (324)
--|.++.-|.|...+ +|++++.|.
T Consensus 8 p~i~~~~~y~~g~~~--~~~~~~~g~ 31 (367)
T PRK02731 8 PGILDIAPYVPGKPI--EELVREYGI 31 (367)
T ss_pred CCCCCCCCCCCCCCH--HHHHHHCCC
T ss_conf 212048998999998--999986098
No 336
>TIGR01428 HAD_type_II haloacid dehalogenase, type II; InterPro: IPR006328 These proteins catalyze the hydrolytic dehalogenation of small L-2-haloalkanoic acids to yield the corresponding D-2-hydroxyalkanoic acids . They belong to the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases, class (subfamily) I. Note that the Type I HAD enzymes have not yet been fully characterised, but clearly utilise a substantially different catalytic mechanism and are thus unlikely to be related.; GO: 0019120 hydrolase activity acting on acid halide bonds in C-halide compounds, 0008152 metabolic process.
Probab=22.00 E-value=54 Score=13.35 Aligned_cols=44 Identities=9% Similarity=0.317 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHH--CC--------CCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH
Q ss_conf 777888898740--01--------000121024444415899999971978767336
Q gi|254780497|r 228 VELIEKVFDSTH--LT--------IENIDWFVPHQANWRIINSIVDKMKIPFDKVIV 274 (324)
Q Consensus 228 ~~~i~~~L~~~g--l~--------~~did~~~~Hq~~~~~~~~~~~~lgl~~e~~~~ 274 (324)
++.+..+++++| |+ .|++..|=| +...-+...+.||++++.+..
T Consensus 126 ~~~~~~~~~~aGvdL~~~Fd~~lS~d~~~~YKP---~P~vY~~~~~~lg~~p~ev~~ 179 (207)
T TIGR01428 126 PAMLKSLVKHAGVDLDLPFDAVLSADAVRAYKP---APQVYQLALEALGVPPEEVLF 179 (207)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC---CHHHHHHHHHHHCCCHHHEEE
T ss_conf 678999999628875300001014131235588---778888888763687878211
No 337
>PRK12615 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=22.00 E-value=48 Score=13.68 Aligned_cols=29 Identities=14% Similarity=0.275 Sum_probs=12.3
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
Q ss_conf 999999999999997402123544336650122
Q gi|254780497|r 51 TTASLGEAAARDALHHAEMSVDDIDLIIVATST 83 (324)
Q Consensus 51 ~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~ 83 (324)
+.+|.|.++++...+ ...+.+.|||+|-.
T Consensus 41 DYPd~a~~Va~~V~~----~~~~~GIliCGTGi 69 (171)
T PRK12615 41 HYPIFGKKVGEAVVN----GQADLGVCICGTGV 69 (171)
T ss_pred CCHHHHHHHHHHHHC----CCCCEEEEEECCCH
T ss_conf 826999999999976----99764699817857
No 338
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=21.94 E-value=54 Score=13.34 Aligned_cols=66 Identities=9% Similarity=0.037 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9999999999997402123544336650122334589853100112202686444421012200346788899
Q gi|254780497|r 53 ASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTADS 125 (324)
Q Consensus 53 ~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A~~ 125 (324)
..++.+|....+....++|+ .|-+... .+--...++++.+|.+.+..+-.++|--|-+.|+..|+.
T Consensus 37 ~~~a~~a~~~~~~~N~~~~~-----~~P~~~~--mE~~vv~~~a~l~g~p~~~G~~tsGGTes~l~Al~aaR~ 102 (375)
T PRK13520 37 HPIAREAHEMFLETNLGDPG-----LFPGTAK--LEREVVRMLGELLHLPDAYGYITSGGTEANIQAVRAARN 102 (375)
T ss_pred HHHHHHHHHHHHHHCCCCCC-----CCHHHHH--HHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHH
T ss_conf 49999999999961789853-----3877999--999999999998099988089956189999999999976
No 339
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=21.94 E-value=51 Score=13.50 Aligned_cols=59 Identities=19% Similarity=0.142 Sum_probs=26.0
Q ss_pred HHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf 1102475188982898899999999999999740212354433665012233458985310011220268644
Q gi|254780497|r 34 IKRRVGISRRHIAGKDETTASLGEAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFA 106 (324)
Q Consensus 34 i~~~~GI~~R~~~~~~e~~~~la~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~ 106 (324)
+.+..|.+.---...+.++..+| |...++.|.| -||+-+ +..++++.-|. ..|+++.++
T Consensus 42 ~a~~~g~k~av~v~sgT~AL~la-------l~al~i~~gd--eVi~p~----~tf~at~~ai~-~~Ga~pvf~ 100 (379)
T PRK11658 42 FCQLTGNQHAIAVSSATAGMHIT-------LMALGIGPGD--EVITPS----QTWVSTLNMIV-LLGATPVMV 100 (379)
T ss_pred HHHHHCCCEEEEECCHHHHHHHH-------HHHCCCCCCC--EEEECC----CCHHHHHHHHH-HCCCEEEEE
T ss_conf 99997869499976889999999-------9986988839--999899----55699999999-819989974
No 340
>pfam02261 Asp_decarbox Aspartate decarboxylase. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalysed by the enzyme aspartate decarboxylase EC:4.1.1.11 which requires a pyruvoyl group for its activity. It is synthesized initially as a proenzyme which is then proteolytically cleaved to an alpha (C-terminal) and beta (N-terminal) subunit and a pyruvoyl group. This family contains both chains of aspartate decarboxylase.
Probab=21.70 E-value=19 Score=16.20 Aligned_cols=16 Identities=13% Similarity=0.241 Sum_probs=7.8
Q ss_pred CCCCCEEEEECCCCCC
Q ss_conf 5565316763022432
Q gi|254780497|r 131 VVRRVMVIGSDTFSRI 146 (324)
Q Consensus 131 ~~~~~Lvv~~e~~S~~ 146 (324)
++.++.|+....-.|+
T Consensus 40 ~~E~V~V~Nv~NG~R~ 55 (116)
T pfam02261 40 EYEKVQIVNVNNGERF 55 (116)
T ss_pred CCCEEEEEECCCCCEE
T ss_conf 8988999989899689
No 341
>PRK05472 redox-sensing transcriptional repressor Rex; Provisional
Probab=21.52 E-value=55 Score=13.28 Aligned_cols=18 Identities=11% Similarity=0.287 Sum_probs=8.2
Q ss_pred HHHHCCCCCCEEEEECCC
Q ss_conf 896415565316763022
Q gi|254780497|r 126 YIRSGVVRRVMVIGSDTF 143 (324)
Q Consensus 126 li~~g~~~~~Lvv~~e~~ 143 (324)
.+..+...++.+|++-..
T Consensus 78 iLG~~~~~~v~lvGaGnL 95 (211)
T PRK05472 78 ILGLDKTTNVALVGAGNL 95 (211)
T ss_pred HHCCCCCCEEEEECCCHH
T ss_conf 968999750899888779
No 342
>TIGR02638 lactal_redase lactaldehyde reductase; InterPro: IPR013460 The proteins in this entry form a distinct clade of iron-containing alcohol dehydrogenases. The genes encoding these proteins are generally found in apparent operons for the catabolism of rhamnose or fucose. Catabolism of both of these monosaccharides results in the production of lactaldehydes, which are reduced by these enzymes to 1,2 propanediol . These enzymes are also sometimes called 1,2 propanediol oxidoreductases. They are active under anaerobic conditions in E. coli, while being inactivated by reactive oxygen species under aerobic conditions . Under aerobic conditions the lactaldehyde product of rhamnose and fucose catabolism is believed to be oxidized to lactate by a separate enzyme, lactaldehyde dehydrogenase..
Probab=21.48 E-value=18 Score=16.40 Aligned_cols=53 Identities=15% Similarity=0.323 Sum_probs=22.1
Q ss_pred CCCEEEEECCCCCHHHHHH-HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHC
Q ss_conf 7518898289889999999-99999997402123544336650122334589853100112202
Q gi|254780497|r 39 GISRRHIAGKDETTASLGE-AAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGM 101 (324)
Q Consensus 39 GI~~R~~~~~~e~~~~la~-~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl 101 (324)
|+++=.+.- |.+...+.+ .-+-++|+++++ ++=||-...| + | +...|++-+..
T Consensus 28 ~~~KAlvvT-Dk~Li~~gv~~~v~~~Ld~~~~-----~Y~lfd~v~p-N--P-T~~~Vk~G~a~ 81 (380)
T TIGR02638 28 GFKKALVVT-DKDLIKFGVADKVTELLDEAKI-----AYELFDEVKP-N--P-TITVVKAGVAA 81 (380)
T ss_pred CCCCEEEEE-CHHHHHHHHHHHHHHHHHHCCC-----CHHHHCCCCC-C--C-CHHHHHHHHHH
T ss_conf 885138886-6146766579999999862278-----8346257788-9--7-58999989999
No 343
>TIGR01136 cysKM cysteine synthases; InterPro: IPR005856 This model discriminates cysteine synthases (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblance to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded. Cysteine synthase (O-acetylserine (thiol)-lyase) is the enzyme responsible for the formation of cysteine from O-acetyl-serine and hydrogen sulphide with the concomitant release of acetic acid. In bacteria such two forms of the enzyme are known (genes cysK and cysM). CysM differs from CysK in that it can also use thiosulphate instead of sulphide, to produce cysteine thiosulphonate instead of cysteine. ; GO: 0004124 cysteine synthase activity, 0006535 cysteine biosynthetic process from serine.
Probab=21.32 E-value=56 Score=13.26 Aligned_cols=82 Identities=21% Similarity=0.191 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEECC--CC----------CC----CCCCCCC----CHHHHHHCCCCCCCCCCCCCC
Q ss_conf 9999999999740212354433665012--23----------34----5898531----001122026864444210122
Q gi|254780497|r 55 LGEAAARDALHHAEMSVDDIDLIIVATS--TP----------DQ----TFPSTAV----NIQNRLGMKRGFAFDMQAVCS 114 (324)
Q Consensus 55 la~~Aa~~al~~a~~~~~~Id~ii~~s~--~~----------~~----~~p~~a~----~i~~~LGl~~~~~~di~~~C~ 114 (324)
.|..=..+|.++-.+.|.+. ||=.|+ |+ .| .+|-+-+ .+.+.+|++ +=++.+--
T Consensus 45 ~A~~MI~~AE~~G~lk~G~~--iiEaTSGNTGIaLAMvAAarGYkliL~MPetmS~ERr~~l~ayGA~----L~LT~~~~ 118 (315)
T TIGR01136 45 IALNMILDAEKRGLLKPGTT--IIEATSGNTGIALAMVAAARGYKLILTMPETMSLERRKLLKAYGAE----LILTPAEE 118 (315)
T ss_pred HHHHHHHHHHHCCCCCCCCE--EEECCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCE----EEEECCCC
T ss_conf 88999999986588788888--9842778448999999986199189985887178999999870966----98837335
Q ss_pred CHHHHHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf 0034678889989641556531676302
Q gi|254780497|r 115 GFVYAVTTADSYIRSGVVRRVMVIGSDT 142 (324)
Q Consensus 115 ~~~~al~~A~~li~~g~~~~~Lvv~~e~ 142 (324)
|+--|++.|..+++..+.+++++=--|+
T Consensus 119 GM~GAi~kA~el~~~~p~~~~~l~QF~N 146 (315)
T TIGR01136 119 GMKGAIDKAEELAAETPNKYVMLDQFEN 146 (315)
T ss_pred CCHHHHHHHHHHHHHCCCCEEECCCCCC
T ss_conf 7577899999999858896210332588
No 344
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. Related proteins include the BadF/BadG/BcrA/BcrD ATPase family (pfam01869), which includes an activator for (R)-2-hydroxyglutaryl-CoA dehydratase.
Probab=21.31 E-value=56 Score=13.26 Aligned_cols=14 Identities=21% Similarity=0.320 Sum_probs=8.3
Q ss_pred CCCCCEEEEECCCC
Q ss_conf 35443366501223
Q gi|254780497|r 71 VDDIDLIIVATSTP 84 (324)
Q Consensus 71 ~~~Id~ii~~s~~~ 84 (324)
+.+.|.++.+||.+
T Consensus 70 ~~~~~~vfi~~cfr 83 (404)
T TIGR03286 70 YTEADAVFIATCFR 83 (404)
T ss_pred CCCCCEEEEEEHHC
T ss_conf 86656587720212
No 345
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=21.21 E-value=56 Score=13.24 Aligned_cols=58 Identities=12% Similarity=0.224 Sum_probs=28.0
Q ss_pred CCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf 4433665012233458985310011220268644-44210122003467888998964155653167630
Q gi|254780497|r 73 DIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFA-FDMQAVCSGFVYAVTTADSYIRSGVVRRVMVIGSD 141 (324)
Q Consensus 73 ~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~-~di~~~C~~~~~al~~A~~li~~g~~~~~Lvv~~e 141 (324)
.|+.++++-...++.- .---.+++++|+..... .. ..--.+...+++.| . .+++|+.+
T Consensus 88 gi~~vv~GdI~s~~qr-~~~e~~c~~lgl~~~~PLW~--------~~~~~ll~e~i~~G-f-~aiiv~V~ 146 (194)
T cd01994 88 GVDAVVFGAILSEYQR-TRVERVCERLGLEPLAPLWG--------RDQEELLREMIEAG-F-KAIIIKVA 146 (194)
T ss_pred CCCEEEECCCCCHHHH-HHHHHHHHHCCCEEECHHCC--------CCHHHHHHHHHHCC-C-EEEEEEEE
T ss_conf 9959999963328899-99999999739888700107--------99999999999879-9-09999950
No 346
>TIGR00761 argB acetylglutamate kinase; InterPro: IPR004662 N -Acetylglutamate (NAG) fulfils distinct biological roles in lower and higher organisms. In prokaryotes, lower eukaryotes and plants it is the first intermediate in the biosynthesis of arginine, whereas in ureotelic (excreting nitrogen mostly in the form of urea) vertebrates, it is an essential allosteric cofactor for carbamyl phosphate synthetase I (CPSI), the first enzyme of the urea cycle. The pathway that leads from glutamate to arginine in lower organisms employs eight steps, starting with the acetylation of glutamate to form NAG. In these species, NAG can be produced by two enzymatic reactions: one catalysed by NAG synthase (NAGS) and the other by ornithine acetyltransferase (OAT). In ureotelic species, NAG is produced exclusively by NAGS. In lower organisms, NAGS is feedback-inhibited by L-arginine, whereas mammalian NAGS activity is significantly enhanced by this amino acid. The NAGS genes of bacteria, fungi and mammals are more diverse than other arginine-biosynthesis and urea-cycle genes. The evolutionary relationship between the distinctly different roles of NAG and its metabolism in lower and higher organisms remains to be determined . The pathway from glutamate to arginine is: NAGS; N-acetylglutamate synthase (2.3.1.1 from EC) (glutamate to N-acetylglutamate) NAGK; N-acetylglutamate kinase (2.7.2.8 from EC) (N-acetylglutamate to N-acetylglutamate-5P) NAGSA; N-acetyl-gamma-glutamyl-phosphate reductase (1.2.1.38 from EC) (N-acetylglutamate-5P to N-acetylglumate semialdehyde) Acetylornithine aminotransferase (2.6.1.11 from EC) (N-acetylglumate semialdehyde to N-acetylornithine) Acetylornithine deacetylase (3.5.1.16 from EC) (N-acetylornithine to ornithine) Arginase (3.5.3.1 from EC) (ornithine to arginine) This entry describes N-acetylglutamate kinases (ArgB) of many prokaryotes and the N-acetylglutamate kinase domains of multifunctional proteins from yeasts as well as some, as yet, uncharacterised proteins.; GO: 0003991 acetylglutamate kinase activity, 0006526 arginine biosynthetic process, 0005737 cytoplasm.
Probab=21.10 E-value=56 Score=13.23 Aligned_cols=21 Identities=10% Similarity=0.112 Sum_probs=8.7
Q ss_pred HHHHHHCCCHHHHHHCCCCCE
Q ss_conf 999880999878110247518
Q gi|254780497|r 22 DLESIVDTSDGWIKRRVGISR 42 (324)
Q Consensus 22 el~~~~~~~~~~i~~~~GI~~ 42 (324)
++.+.++++++++.-..|...
T Consensus 47 ~~~~~lgi~~~f~~Gl~G~~~ 67 (254)
T TIGR00761 47 ELLEALGIEPEFKNGLSGVVF 67 (254)
T ss_pred HHHHHCCCCCEEECCCCCEEE
T ss_conf 899832898367668872037
No 347
>PRK13505 formate--tetrahydrofolate ligase; Provisional
Probab=20.84 E-value=57 Score=13.19 Aligned_cols=11 Identities=36% Similarity=0.631 Sum_probs=6.7
Q ss_pred EEEEECCCCCE
Q ss_conf 99997145014
Q gi|254780497|r 307 LLEAMGGGFTS 317 (324)
Q Consensus 307 ll~~~G~G~s~ 317 (324)
+-.+.|+||-.
T Consensus 513 vrlsaGAGFiV 523 (556)
T PRK13505 513 LRPSAGAGFIV 523 (556)
T ss_pred EEECCCCCEEE
T ss_conf 99868885699
No 348
>TIGR02698 CopY_TcrY copper transport repressor, CopY/TcrY family; InterPro: IPR014071 This family includes metal-fist type transcriptional repressors of copper transport systems such as copYZAB of Enterococcus hirae and tcrYAZB (transferable copper resistance) of an Enterococcus faecium (Streptococcus faecium) plasmid. High levels of copper can displace zinc and prevent binding by the repressor, activating efflux by copper resistance transporters. The most closely related proteins excluded by this entry are antibiotic resistance regulators including the methicillin resistance regulatory protein MecI..
Probab=20.71 E-value=50 Score=13.55 Aligned_cols=37 Identities=14% Similarity=0.344 Sum_probs=28.8
Q ss_pred HHHCCHHHHHHHH-HHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 0103202444557-777777888898740010001210
Q gi|254780497|r 212 IRMEGKAVFKYAV-EKAVELIEKVFDSTHLTIENIDWF 248 (324)
Q Consensus 212 ~~~~g~~~~~~~~-~~~~~~i~~~L~~~gl~~~did~~ 248 (324)
++..-..+|..++ +....+|..+++++.++.+||+.+
T Consensus 73 ~~~~~~~lf~~~C~~k~g~~i~~Liee~~ls~~Di~~L 110 (130)
T TIGR02698 73 VENAAEDLFSRICSKKVGNVIADLIEESTLSQDDIEKL 110 (130)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 99999999987602138999999884066787689999
No 349
>PRK04152 consensus
Probab=20.62 E-value=58 Score=13.17 Aligned_cols=28 Identities=0% Similarity=-0.149 Sum_probs=18.8
Q ss_pred EEEEEEEECCCCEECHHHHHHHHCCCHHHH
Q ss_conf 999999964984117889998809998781
Q gi|254780497|r 5 TVRGIGLSLPRRVLSNSDLESIVDTSDGWI 34 (324)
Q Consensus 5 ~I~~~g~ylP~~~v~~~el~~~~~~~~~~i 34 (324)
.|..+..|.|...+ +++.+++|.+++.|
T Consensus 6 ~i~~~~~y~~G~~i--~~~~~~~g~~p~~i 33 (364)
T PRK04152 6 FLNNLKTYEAGKPI--ELVVREYGIDPKDV 33 (364)
T ss_pred HHCCCCCCCCCCCH--HHHHHHHCCCCCCE
T ss_conf 65389998999999--99999829681247
No 350
>pfam09663 Amido_AtzD_TrzD Amidohydrolase ring-opening protein (Amido_AtzD_TrzD). Members of this family are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (EC:3.5.2.15) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for EC:3.5.2.1 (barbiturate + water = malonate + urea) but rather catalyses the ring opening of barbiturase acid to ureidomalonic acid.
Probab=20.48 E-value=58 Score=13.15 Aligned_cols=74 Identities=22% Similarity=0.157 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHCC-CCCCCCEEEEECCCCCCCCCCCCCCHHHHH--HCCCCCCCCC--CCCCCCHHHHHHHHHHH
Q ss_conf 999999999999974021-235443366501223345898531001122--0268644442--10122003467888998
Q gi|254780497|r 52 TASLGEAAARDALHHAEM-SVDDIDLIIVATSTPDQTFPSTAVNIQNRL--GMKRGFAFDM--QAVCSGFVYAVTTADSY 126 (324)
Q Consensus 52 ~~~la~~Aa~~al~~a~~-~~~~Id~ii~~s~~~~~~~p~~a~~i~~~L--Gl~~~~~~di--~~~C~~~~~al~~A~~l 126 (324)
..+.-++|+++++.++|+ +|.|+-+|=.- +| -+ +...|++.. |-+ ..+-|- +++-+-+.+||-+|..
T Consensus 130 qV~~vA~aV~~AM~~AGI~dpaDVH~VQvK--cP-LL---T~~~i~~A~~RG~~-~~t~dt~~SM~~SrgaSALGvAvA- 201 (365)
T pfam09663 130 QITEVAAAVKAAMADAGIADPADVHFVQVK--CP-LL---TSERIADAEARGKT-VATHDTLKSMGYSRGASALGIAVA- 201 (365)
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHEEEEEEC--CC-CC---CHHHHHHHHHCCCC-EEECCCCCCCCCCCCHHHHHHHHH-
T ss_conf 999999999999997399986770379841--77-56---77788888846984-024475210133454148889998-
Q ss_pred HHHCCCCCC
Q ss_conf 964155653
Q gi|254780497|r 127 IRSGVVRRV 135 (324)
Q Consensus 127 i~~g~~~~~ 135 (324)
.|.+..-
T Consensus 202 --LGEv~~~ 208 (365)
T pfam09663 202 --LGEVPAA 208 (365)
T ss_pred --HCCCCHH
T ss_conf --5565623
No 351
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=20.47 E-value=50 Score=13.56 Aligned_cols=57 Identities=12% Similarity=0.085 Sum_probs=25.4
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 999999974021235443366501223345898531001122026864444210122003467888
Q gi|254780497|r 58 AAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVYAVTTA 123 (324)
Q Consensus 58 ~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~al~~A 123 (324)
+...+.|.+.||++++- .|||.... ....+-..++.+.+|.++...+ .|++.++..+
T Consensus 73 ~~~~~~l~~lGI~~~~~-VVvYd~~~--~~~A~R~~W~L~~~Gh~~V~iL------dGG~~~W~~~ 129 (281)
T PRK11493 73 EAFAVAMRELGVNQDKH-LVVYDEGN--LFSAPRAWWMLRTFGVEKVSIL------AGGLAGWQRD 129 (281)
T ss_pred HHHHHHHHHCCCCCCCE-EEEECCCC--CCHHHHHHHHHHHCCCCCEEEC------CCCHHHHHHC
T ss_conf 99999999779999898-99987985--4089999999998399983687------7738889874
No 352
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=20.39 E-value=58 Score=13.13 Aligned_cols=59 Identities=14% Similarity=0.179 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHC-CCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHH
Q ss_conf 999999999997402-12354433665012233458985310011220268644442101220034
Q gi|254780497|r 54 SLGEAAARDALHHAE-MSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMKRGFAFDMQAVCSGFVY 118 (324)
Q Consensus 54 ~la~~Aa~~al~~a~-~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~~~~~~di~~~C~~~~~ 118 (324)
+-|.+|.+++.++.+ .+++|.|++|.-.--+..+ ...+.+.-.+.+.+-|+.|=.||+.
T Consensus 5 ~~a~~a~~~l~~~y~~~~~~eaDliIvlGGDGT~L------~a~r~~~~~~~PilGIN~G~lGFL~ 64 (246)
T PRK04761 5 PEAQAALEELVKRYGDVPIEEADVIVALGGDGFML------QTLHRYMNSGKPVYGMNRGTVGFLM 64 (246)
T ss_pred HHHHHHHHHHHHHHCCCCHHHCCEEEEECCCHHHH------HHHHHHHCCCCCEEEEECCCCCCCC
T ss_conf 89999999999985899965799999989879999------9999874149937989779777544
No 353
>KOG3157 consensus
Probab=20.37 E-value=55 Score=13.27 Aligned_cols=31 Identities=35% Similarity=0.550 Sum_probs=18.8
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 899999971978767336586519330126999999
Q gi|254780497|r 257 IINSIVDKMKIPFDKVIVTVDIHGNTSAASIPLALA 292 (324)
Q Consensus 257 ~~~~~~~~lgl~~e~~~~~~~~~Gn~~sas~~~~L~ 292 (324)
..+.+++++|+|+|++--.+ | -|+|-..++.
T Consensus 191 ~r~~ic~~lg~~~dq~eLSM---G--MS~DF~~AIe 221 (244)
T KOG3157 191 LRESICKKLGIPADQVELSM---G--MSADFLLAIE 221 (244)
T ss_pred HHHHHHHHHCCCHHHHHHHC---C--CCHHHHHHHH
T ss_conf 99999998489867810023---5--6366999998
No 354
>PRK10729 nudF ADP-ribose pyrophosphatase NudF; Provisional
Probab=20.28 E-value=58 Score=13.12 Aligned_cols=18 Identities=6% Similarity=0.041 Sum_probs=10.9
Q ss_pred HHHHHHHHHHCCCCCCCC
Q ss_conf 788889874001000121
Q gi|254780497|r 230 LIEKVFDSTHLTIENIDW 247 (324)
Q Consensus 230 ~i~~~L~~~gl~~~did~ 247 (324)
+.+++.+++|+.+.++..
T Consensus 101 A~REl~EEtG~~~~~l~~ 118 (202)
T PRK10729 101 ARREAIEEAGLIVGRTKP 118 (202)
T ss_pred HHHHHHHHHCCCCCCEEE
T ss_conf 999988875958052899
Done!