HHsearch alignment for GI: 254780497 and conserved domain: pfam08392
>pfam08392 FAE1_CUT1_RppA FAE1/Type III polyketide synthase-like protein. The members of this family are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region featured in this family contains the active site residues, as well as motifs involved in substrate binding.
Probab=99.83 E-value=1.3e-19 Score=144.92 Aligned_cols=198 Identities=17% Similarity=0.195 Sum_probs=144.3
Q ss_pred EEEEEEEEEECCC--CEECHHHHHHHHC----CCHH------HHHHCCCCCEEEEECCC-------CCH------HH-HH
Q ss_conf 2699999996498--4117889998809----9987------81102475188982898-------899------99-99
Q gi|254780497|r 3 RSTVRGIGLSLPR--RVLSNSDLESIVD----TSDG------WIKRRVGISRRHIAGKD-------ETT------AS-LG 56 (324)
Q Consensus 3 ~~~I~~~g~ylP~--~~v~~~el~~~~~----~~~~------~i~~~~GI~~R~~~~~~-------e~~------~~-la 56 (324)
T Consensus 8 ~vYLvDfaC~kp~~~~kv~~~~~~e~~~~~~~f~~~s~~F~~kil~rSGlG~eTy~P~~~~~~p~~~s~~~ar~Eae~v~ 87 (290)
T pfam08392 8 PVYLVDYACYKPPDDRKVSTETFMEHIRRNGKFDEESLDFQRKILERSGLGEETYVPRSVLEIPPNPTMAEAREEAEEVM 87 (290)
T ss_pred CEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf 88998553207972031699999999986589986899999999996489998857825425899987999999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC-CCCCCCCC-CCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 9999999974021235443366501223345898531001122026-86444421-012200346788899896415565
Q gi|254780497|r 57 EAAARDALHHAEMSVDDIDLIIVATSTPDQTFPSTAVNIQNRLGMK-RGFAFDMQ-AVCSGFVYAVTTADSYIRSGVVRR 134 (324)
Q Consensus 57 ~~Aa~~al~~a~~~~~~Id~ii~~s~~~~~~~p~~a~~i~~~LGl~-~~~~~di~-~~C~~~~~al~~A~~li~~g~~~~ 134 (324)
T Consensus 88 f~avd~Lf~ktgv~P~dIdiLVvN-cSlf~PtPSLsamivNrykmR~di~s~nLsGMGCSAglIsIdLAk~lL~~~~ns~ 166 (290)
T pfam08392 88 FGAVDELFAKTGVRPRDIGILVVN-CSLFNPTPSLSAMIVNRYKMRGDIKSYNLSGMGCSAGLISIDLAKDLLQVHPNTY 166 (290)
T ss_pred HHHHHHHHHHCCCCHHHCCEEEEE-CCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCE
T ss_conf 999999999739987689999996-7788888528999988606864300633667651134757999999998489965
Q ss_pred CEEEEECCCCCCCC-CCCCC---CCCCCCCCCCEEEEECCCCCC--CCCCCCCCEEEEEECCCCCCCCEEECC
Q ss_conf 31676302243222-45663---232345443123440265446--543445410123203555556177548
Q gi|254780497|r 135 VMVIGSDTFSRIVD-WSDRS---TCVLFGDGAGALILEGVEVKG--SSMADTGILSTYLCSDGSYIDKLYVDG 201 (324)
Q Consensus 135 ~Lvv~~e~~S~~~d-~~d~~---~~~lfGDGAaA~ll~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (324)
T Consensus 167 ALVvSTE~it~n~Y~G~~rsmLl~NcLFR~GgAAiLLSN~~~~r~rAky~L~h~VRth~ga~D~sy~cv~q~E 239 (290)
T pfam08392 167 ALVVSTENITPNWYAGNDRSMLLPNCLFRMGGAAILLSNKPADRRRAKYELVHTVRTHKGADDRAYRCVYQEE 239 (290)
T ss_pred EEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCHHCEEEEEE
T ss_conf 9999853045445358736650140113577147983058443544523742078742676731005254500