HHsearch alignment for GI: 254780498 and conserved domain: COG4002
>COG4002 Predicted phosphotransacetylase [General function prediction only].
Probab=98.16 E-value=5.9e-06 Score=57.46 Aligned_cols=185 Identities=20% Similarity=0.350 Sum_probs=125.0
Q ss_pred HHHHHHCCCCEEEEEECCHHHHHHHHHH-HCCCCCCCCCCCHHHCCCCCC-CCEEEEECCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 9999854995399970642678888875-322556763220011055889-84599861327778989999999999999
Q gi|254780498|r 99 AIEAVKKNQAASVVTAGNTGALIAMARL-CLSRISGVDRPSLAAFWPTVK-GKCIILDVGATIGSTVSHMVQLSILGSFF 176 (364)
Q Consensus 99 a~~lvk~g~aDa~VSaGnTGA~la~a~~-~lg~i~Gv~RPala~~~Pt~~-g~~vllD~GAN~d~~~~~L~qfA~mGs~y 176 (364)
T Consensus 55 lve~Lv~g~~daaVR----Gslsas~v~~eLkealgm~~~~Ras~le~~~~~~flLaPVGIDEg~ti~dk~ri~~laaef 130 (256)
T COG4002 55 LVEKLVDGEIDAAVR----GSLSASKVILELKEALGMKFYCRASILENPFTNGFLLAPVGIDEGKTIKDKIRIIELAAEF 130 (256)
T ss_pred HHHHHHCCCHHHHHH----CCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 999997450367774----4543225899999853887313210124588673487431148884177778999999999
Q ss_pred HHHHCCCCCCEEEEEECCCCCCCCCHH-HHHH---HHHHHHCCCCCCCEECC-CCH--------HHCCCCCCCEEEECCH
Q ss_conf 998568999658998404555556579-9999---99974024571320023-455--------4532456838997551
Q gi|254780498|r 177 ARSVAGINCPSIGLLNVGTEEIKGNDV-LQES---ARLLRGECCGAFKYKGF-IEA--------NDIAKGFVDVIVTEGF 243 (364)
Q Consensus 177 ak~~~~~~~PrVgLLNiG~E~~KG~~~-~kea---~~LL~~~~~~~~nF~Gn-iEg--------~~i~~g~~DVvV~DGF 243 (364)
T Consensus 131 lrr-~~~e-p~VaVlSgGRlgDlGR~~~VDrtladgEfva~------~~k~~g~~v~H~~ILIEealkdg-nvIia~dGI 201 (256)
T COG4002 131 LRR-TGIE-PKVAVLSGGRLGDLGRNKEVDRTLADGEFVAE------HFKGNGVDVIHYGILIEEALKDG-NVIIAVDGI 201 (256)
T ss_pred HHH-HCCC-CCEEEECCCCCHHCCCCCHHHHHHHCHHHHHH------HHHCCCCEEEEEEEEHHHHHHCC-CEEEEECCC
T ss_conf 997-0989-61699507730002576212024323299999------87416822689666778786148-889975675
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCEEEEECCCCCHHHHHHH
Q ss_conf 27889999888899999999986322208899999989999999972696870874674216148983889986899999
Q gi|254780498|r 244 SGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFDPRNFNGGVLLGVDGLVVKGHGSSDAKSIFNV 323 (364)
Q Consensus 244 tGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~~~gGa~llGl~g~vik~HG~s~~~a~~~a 323 (364)
T Consensus 202 tGNLiFR~l-----------------------~-l---------vg--g~~g~GAp~al~~d~vFVDTSR~q~a~~yarA 246 (256)
T COG4002 202 TGNLIFRCL-----------------------G-L---------VG--GIRGYGAPIALDKDVVFVDTSRNQNAEGYARA 246 (256)
T ss_pred CCHHHHHHH-----------------------H-H---------HC--CCCCCCCCEEECCCCEEEECHHHHHHHHHHHH
T ss_conf 430455567-----------------------7-7---------53--66777883474488189866045548999999
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254780498|r 324 LGIAHNMS 331 (364)
Q Consensus 324 i~~a~~~~ 331 (364)
T Consensus 247 lkfl~~~a 254 (256)
T COG4002 247 LKFLHGLA 254 (256)
T ss_pred HHHHHHHH
T ss_conf 99987541