Query gi|254780498|ref|YP_003064911.1| putative glycerol-3-phosphate acyltransferase PlsX [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 364
No_of_seqs 153 out of 1524
Neff 5.7
Searched_HMMs 39220
Date Sun May 29 23:27:06 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780498.hhm -d /home/congqian_1/database/cdd/Cdd.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0416 PlsX Fatty acid/phosph 100.0 0 0 848.5 37.4 334 12-348 1-336 (338)
2 PRK05331 putative glycerol-3-p 100.0 0 0 837.8 36.0 316 12-330 1-317 (317)
3 TIGR00182 plsX fatty acid/phos 100.0 0 0 837.6 29.3 334 13-349 1-339 (344)
4 PRK13845 putative glycerol-3-p 100.0 0 0 814.3 37.4 331 6-341 88-428 (437)
5 pfam02504 FA_synthesis Fatty a 100.0 0 0 813.2 34.9 321 13-338 1-322 (322)
6 PRK13846 putative glycerol-3-p 100.0 0 0 792.0 34.5 311 12-343 2-315 (316)
7 PRK05632 phosphate acetyltrans 100.0 1.2E-27 2.9E-32 194.4 21.1 280 7-330 386-696 (702)
8 PRK12862 malic enzyme; Reviewe 100.0 1.3E-27 3.3E-32 194.0 21.2 283 6-333 440-759 (761)
9 PRK07232 malic enzyme; Reviewe 100.0 1.6E-27 4.1E-32 193.5 21.3 282 6-332 434-752 (753)
10 PRK09653 eutD phosphotransacet 100.0 1.2E-26 3.1E-31 187.9 23.3 287 2-334 5-324 (324)
11 pfam01515 PTA_PTB Phosphate ac 100.0 1.3E-26 3.3E-31 187.8 23.3 282 2-327 4-318 (319)
12 PRK12861 malic enzyme; Reviewe 100.0 1.7E-26 4.2E-31 187.1 23.5 283 9-335 443-762 (762)
13 COG0280 Pta Phosphotransacetyl 99.9 3E-24 7.7E-29 172.8 23.6 282 9-333 10-325 (327)
14 TIGR00651 pta phosphate acetyl 99.9 8.3E-24 2.1E-28 170.0 17.8 255 27-325 9-319 (322)
15 PRK11890 phosphate acetyltrans 99.9 2.3E-22 5.8E-27 161.0 24.4 268 8-334 18-306 (312)
16 PRK05805 phosphate butyryltran 99.9 1.4E-21 3.6E-26 156.0 22.5 262 10-332 15-299 (301)
17 PRK07742 phosphate butyryltran 99.9 2.2E-21 5.7E-26 154.7 22.4 260 10-332 13-298 (299)
18 PRK08190 bifunctional enoyl-Co 99.5 6.6E-11 1.7E-15 88.7 24.1 247 27-334 187-460 (465)
19 TIGR03270 methan_mark_4 putati 99.4 4.5E-11 1.1E-15 89.7 14.2 179 97-327 8-202 (202)
20 PRK01909 pdxA 4-hydroxythreoni 99.3 6.3E-09 1.6E-13 76.2 21.1 280 8-335 1-327 (329)
21 TIGR02706 P_butyryltrans phosp 99.2 1.8E-08 4.6E-13 73.3 18.8 248 10-328 11-292 (295)
22 PRK05312 pdxA 4-hydroxythreoni 98.9 3.5E-06 9E-11 58.9 20.7 272 12-334 3-335 (336)
23 PRK04607 consensus 98.8 1.2E-05 3.2E-10 55.4 23.5 272 9-334 2-330 (330)
24 PRK02848 consensus 98.7 2.4E-05 6.1E-10 53.6 22.6 276 9-335 4-336 (341)
25 PRK03367 consensus 98.7 1.5E-05 3.7E-10 55.0 19.5 267 13-334 5-328 (329)
26 PRK03743 pdxA 4-hydroxythreoni 98.7 5.1E-06 1.3E-10 57.8 17.0 272 13-334 4-330 (333)
27 PRK00232 pdxA 4-hydroxythreoni 98.7 1.7E-05 4.3E-10 54.6 19.2 271 14-334 6-332 (334)
28 PRK04507 consensus 98.6 5E-05 1.3E-09 51.6 22.5 268 12-334 3-323 (323)
29 PRK03877 consensus 98.5 3.6E-05 9.1E-10 52.5 16.0 268 14-332 4-327 (328)
30 PRK02746 pdxA 4-hydroxythreoni 98.3 0.00032 8.1E-09 46.5 18.6 272 13-333 2-332 (332)
31 PRK03371 pdxA 4-hydroxythreoni 98.3 0.00011 2.8E-09 49.5 14.5 267 14-331 4-326 (326)
32 pfam04166 PdxA Pyridoxal phosp 98.2 0.0002 5.1E-09 47.8 15.2 238 41-328 7-299 (299)
33 COG4002 Predicted phosphotrans 98.2 5.9E-06 1.5E-10 57.5 6.3 185 99-331 55-254 (256)
34 COG1995 PdxA Pyridoxal phospha 97.9 0.0013 3.4E-08 42.6 14.5 282 12-335 3-330 (332)
35 PRK03946 pdxA 4-hydroxythreoni 97.6 0.0042 1.1E-07 39.4 13.5 246 24-332 14-303 (304)
36 TIGR02709 branched_ptb branche 95.9 0.047 1.2E-06 32.8 7.3 244 16-329 2-270 (271)
37 TIGR02346 chap_CCT_theta T-com 86.4 1.2 3E-05 24.0 4.2 128 171-316 217-371 (554)
38 pfam10941 DUF2620 Protein of u 84.2 0.96 2.5E-05 24.6 2.9 72 44-138 2-79 (117)
39 pfam06506 PrpR_N Propionate ca 81.7 4.1 0.00011 20.6 13.3 139 96-333 22-167 (169)
40 cd01844 SGNH_hydrolase_like_6 71.2 8 0.00021 18.8 6.7 115 107-243 31-159 (177)
41 cd03334 Fab1_TCP TCP-1 like do 70.6 5.4 0.00014 19.8 3.4 68 181-253 82-149 (261)
42 KOG1731 consensus 69.1 8.3 0.00021 18.7 4.1 168 48-231 171-357 (606)
43 TIGR01133 murG undecaprenyldip 65.5 11 0.00027 18.0 9.3 191 8-214 1-222 (368)
44 KOG3857 consensus 64.7 11 0.00028 17.9 8.2 88 11-116 38-136 (465)
45 KOG4797 consensus 61.8 9.7 0.00025 18.2 3.3 44 313-356 39-82 (123)
46 cd03414 CbiX_SirB_C Sirohydroc 60.5 13 0.00033 17.5 4.1 30 162-192 12-41 (117)
47 cd01463 vWA_VGCC_like VWA Volt 59.3 14 0.00035 17.3 9.0 39 12-50 15-58 (190)
48 COG0303 MoeA Molybdopterin bio 56.6 10 0.00026 18.1 2.7 103 150-265 146-266 (404)
49 PRK00923 sirohydrochlorin coba 54.2 16 0.00042 16.8 4.2 12 200-211 18-29 (130)
50 COG4518 Mu-like prophage FluMu 54.1 6.3 0.00016 19.4 1.2 39 184-228 38-76 (122)
51 cd00128 XPG Xeroderma pigmento 48.3 20 0.00052 16.2 5.1 87 97-214 153-243 (316)
52 COG0031 CysK Cysteine synthase 46.8 21 0.00054 16.1 3.0 30 95-124 48-80 (300)
53 KOG0117 consensus 46.2 22 0.00056 16.0 3.0 18 95-112 180-197 (506)
54 pfam09338 Gly_reductase Glycin 44.6 23 0.00059 15.8 6.1 32 300-331 300-333 (428)
55 pfam01728 FtsJ FtsJ-like methy 43.6 6.3 0.00016 19.4 -0.1 72 150-247 23-101 (176)
56 KOG1099 consensus 43.5 12 0.0003 17.7 1.3 16 101-116 109-124 (294)
57 TIGR03675 arCOG00543 arCOG0178 41.7 16 0.00042 16.8 1.8 31 129-162 181-211 (630)
58 TIGR03674 fen_arch flap struct 41.6 26 0.00066 15.6 3.9 94 97-214 155-256 (338)
59 TIGR01448 recD_rel helicase, R 41.4 26 0.00066 15.5 4.3 189 34-251 473-686 (769)
60 cd03812 GT1_CapH_like This fam 39.9 27 0.0007 15.4 5.7 44 181-224 186-231 (358)
61 TIGR00378 cax calcium/proton e 39.6 26 0.00066 15.6 2.5 81 170-294 35-116 (363)
62 cd01915 CODH Carbon monoxide d 39.4 28 0.00071 15.3 7.1 90 153-242 185-324 (613)
63 PRK10802 peptidoglycan-associa 39.1 28 0.00072 15.3 5.2 16 186-201 99-114 (173)
64 TIGR02826 RNR_activ_nrdG3 anae 36.5 31 0.00079 15.1 4.0 40 14-53 70-113 (165)
65 COG1782 Predicted metal-depend 35.8 19 0.00049 16.4 1.4 13 150-162 205-217 (637)
66 TIGR02768 TraA_Ti Ti-type conj 35.5 32 0.00082 15.0 2.5 16 42-57 529-544 (888)
67 cd03794 GT1_wbuB_like This fam 35.4 32 0.00082 15.0 5.4 69 184-257 247-322 (394)
68 pfam06874 FBPase_2 Firmicute f 35.2 32 0.00083 14.9 2.9 12 259-270 372-383 (641)
69 PRK07048 serine/threonine dehy 33.8 13 0.00033 17.5 0.2 56 72-130 38-96 (321)
70 cd00758 MoCF_BD MoCF_BD: molyb 33.3 35 0.00089 14.7 4.5 12 107-118 58-69 (133)
71 COG5321 Uncharacterized protei 33.3 26 0.00066 15.6 1.7 28 226-253 98-125 (164)
72 KOG1499 consensus 33.1 35 0.00089 14.7 3.1 78 150-249 62-141 (346)
73 PRK10073 predicted glycosyl tr 33.1 35 0.0009 14.7 7.4 38 186-231 61-98 (329)
74 COG0796 MurI Glutamate racemas 32.3 36 0.00092 14.6 9.2 96 28-158 19-121 (269)
75 PRK03980 flap endonuclease-1; 31.6 37 0.00095 14.6 4.0 94 97-214 108-209 (295)
76 PRK03343 transaldolase; Valida 31.6 18 0.00045 16.6 0.6 80 96-178 86-182 (370)
77 pfam11725 AvrE Pathogenicity f 30.9 34 0.00088 14.8 2.0 35 282-316 968-1002(1771)
78 COG1165 MenD 2-succinyl-6-hydr 30.7 31 0.00079 15.1 1.8 81 99-179 15-159 (566)
79 cd03798 GT1_wlbH_like This fam 30.1 39 0.001 14.4 5.2 16 314-329 328-343 (377)
80 PRK00726 murG N-acetylglucosam 30.0 39 0.001 14.4 9.6 105 12-124 1-110 (359)
81 cd03416 CbiX_SirB_N Sirohydroc 29.9 40 0.001 14.4 4.1 24 190-213 4-27 (101)
82 cd03796 GT1_PIG-A_like This fa 29.4 40 0.001 14.3 5.8 94 148-261 192-288 (398)
83 COG3370 Uncharacterized protei 29.0 41 0.001 14.3 4.4 46 12-57 1-51 (113)
84 TIGR00674 dapA dihydrodipicoli 28.8 30 0.00078 15.1 1.5 52 188-247 127-187 (288)
85 PTZ00188 adrenodoxin reductase 28.8 35 0.00089 14.7 1.8 38 6-49 33-70 (506)
86 cd03820 GT1_amsD_like This fam 28.7 42 0.0011 14.3 4.6 35 190-224 181-217 (348)
87 TIGR01037 pyrD_sub1_fam dihydr 28.3 42 0.0011 14.2 2.9 195 17-261 65-294 (308)
88 COG3933 Transcriptional antite 28.2 43 0.0011 14.2 2.2 160 106-292 107-296 (470)
89 PRK13609 diacylglycerol glucos 27.9 43 0.0011 14.2 3.7 36 99-139 96-131 (388)
90 PTZ00217 flap endonuclease-1; 27.8 43 0.0011 14.2 4.5 89 97-214 163-255 (394)
91 pfam03853 YjeF_N YjeF-related 27.7 43 0.0011 14.1 5.7 66 175-246 46-111 (170)
92 COG0119 LeuA Isopropylmalate/h 25.8 10 0.00026 18.1 -1.4 57 287-352 304-360 (409)
93 cd05844 GT1_like_7 Glycosyltra 25.8 47 0.0012 13.9 6.4 130 106-249 141-288 (367)
94 TIGR01431 adm_rel adenosine de 25.6 13 0.00034 17.4 -0.9 34 292-328 397-430 (486)
95 TIGR01469 cobA_cysG_Cterm urop 24.8 49 0.0012 13.8 3.5 27 102-129 102-128 (242)
96 PRK04163 exosome complex RNA-b 24.8 49 0.0012 13.8 5.3 60 284-348 166-227 (232)
97 COG1083 NeuA CMP-N-acetylneura 24.4 50 0.0013 13.8 2.8 143 28-173 29-221 (228)
98 TIGR01788 Glu-decarb-GAD gluta 24.0 36 0.00093 14.6 1.1 65 50-125 61-132 (493)
99 TIGR02802 Pal_lipo peptidoglyc 23.4 52 0.0013 13.6 5.6 46 27-72 16-78 (104)
100 COG2820 Udp Uridine phosphoryl 23.2 52 0.0013 13.6 2.7 76 42-121 17-97 (248)
101 pfam05984 Cytomega_UL20A Cytom 23.2 40 0.001 14.3 1.2 21 226-246 60-80 (102)
102 cd04951 GT1_WbdM_like This fam 23.1 53 0.0013 13.6 5.2 57 190-246 191-255 (360)
103 PRK07409 threonine synthase; V 22.9 53 0.0014 13.6 3.5 40 82-125 56-97 (350)
104 PRK13306 ulaD 3-keto-L-gulonat 22.8 49 0.0013 13.8 1.6 33 11-51 4-37 (216)
105 PRK12404 stage V sporulation p 22.5 54 0.0014 13.5 5.4 57 95-151 115-171 (334)
106 PRK00550 rpsE 30S ribosomal pr 21.9 56 0.0014 13.5 2.8 33 301-333 112-144 (156)
107 PRK05638 threonine synthase; V 21.8 56 0.0014 13.4 3.3 42 82-127 91-134 (443)
108 KOG4411 consensus 21.7 55 0.0014 13.5 1.7 25 151-177 145-169 (292)
109 cd06303 PBP1_LuxPQ_Quorum_Sens 21.6 56 0.0014 13.4 5.4 29 105-133 102-130 (280)
110 cd03821 GT1_Bme6_like This fam 21.3 57 0.0015 13.4 4.8 111 185-329 232-344 (375)
111 KOG0362 consensus 21.2 58 0.0015 13.4 2.3 67 184-254 230-302 (537)
112 TIGR01885 Orn_aminotrans ornit 21.1 58 0.0015 13.3 5.1 67 164-249 84-151 (426)
113 pfam03719 Ribosomal_S5_C Ribos 20.9 58 0.0015 13.3 2.6 32 301-332 33-64 (74)
114 COG0205 PfkA 6-phosphofructoki 20.4 60 0.0015 13.3 5.1 109 11-126 1-117 (347)
115 KOG0816 consensus 20.3 57 0.0015 13.4 1.5 25 26-50 23-47 (223)
116 KOG4667 consensus 20.2 60 0.0015 13.2 5.7 145 184-332 31-227 (269)
117 KOG1205 consensus 20.1 61 0.0015 13.2 3.5 10 104-113 88-97 (282)
No 1
>COG0416 PlsX Fatty acid/phospholipid biosynthesis enzyme [Lipid metabolism]
Probab=100.00 E-value=0 Score=848.46 Aligned_cols=334 Identities=41% Similarity=0.727 Sum_probs=325.7
Q ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCC-CCCEEEECCCCCCCCCCHHHHHHHHC
Q ss_conf 23999974687778177799999999857991799978989999998626975-15579977852017783067999713
Q gi|254780498|r 12 VDTISLDLMGGDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLL-KERSCFHHCEVSIAMDERPADALRRG 90 (364)
Q Consensus 12 m~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~-~~ri~Ii~a~~vI~mde~P~~AlR~k 90 (364)
|+|||||+||||++|.++|+|+.+|++++++++|+||||+++|.++|++++.. .+|++|+||+++|+|||+|++|+|+|
T Consensus 1 ~~~IAiDaMGGD~~P~~vv~g~~~al~~~~~~~~iLvGd~~~i~~~L~~~~~~~~~~i~i~~a~~~I~m~d~p~~AvR~k 80 (338)
T COG0416 1 MIKIAIDAMGGDHGPEVVVPGALQALEEHPDLEIILVGDEDKIEPLLAKAPKLLRERIEIVHAEEVIEMDDKPSQALRKK 80 (338)
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHCC
T ss_conf 94499862577768378899999999868993799977899989988416422100543786453015787889998727
Q ss_pred CCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCC-CCEEEEECCCCCCCCHHHHHHH
Q ss_conf 764279999999854995399970642678888875322556763220011055889-8459986132777898999999
Q gi|254780498|r 91 RNVSSMWRAIEAVKKNQAASVVTAGNTGALIAMARLCLSRISGVDRPSLAAFWPTVK-GKCIILDVGATIGSTVSHMVQL 169 (364)
Q Consensus 91 K~~SSm~~a~~lvk~g~aDa~VSaGnTGA~la~a~~~lg~i~Gv~RPala~~~Pt~~-g~~vllD~GAN~d~~~~~L~qf 169 (364)
|+ ||||+|+++||+|+||||||||||||+|+.+++++|||+||+||||+++|||.. +.+++||+|||+||+|+||+||
T Consensus 81 ~~-sSM~~A~~lVkeg~ADa~VSAGnTGAlma~a~~~lg~i~gI~RPAi~~~~Pt~~~~~~~~LDvGANvd~~~~~L~qf 159 (338)
T COG0416 81 KG-SSMRVALDLVKEGKADACVSAGNTGALMALALLKLGRIKGIDRPALATLLPTIDGGKTVVLDVGANVDCKPEHLVQF 159 (338)
T ss_pred CC-CHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCHHHHHHH
T ss_conf 88-57999999985676777984684699999999874547788855112544355798149996788788899999999
Q ss_pred HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHCCCCCCCEEEECCHHHHHHH
Q ss_conf 99999999985689996589984045555565799999999740245713200234554532456838997551278899
Q gi|254780498|r 170 SILGSFFARSVAGINCPSIGLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFIEANDIAKGFVDVIVTEGFSGNIAI 249 (364)
Q Consensus 170 A~mGs~yak~~~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~~i~~g~~DVvV~DGFtGNi~L 249 (364)
|+||++|++.++++++|||||||||+||+||++++||||+||++.. .+||+||||||||++|.+||||||||||||+|
T Consensus 160 A~MG~~ya~~v~~~~~PrVgLLNIG~Ee~KG~e~~kea~~lLk~~~--~~nF~GnvEg~di~~G~~DVvV~DGFtGNv~L 237 (338)
T COG0416 160 ALMGSAYAEKVLGIKNPRVGLLNIGTEEIKGNELVKEAYELLKETP--LINFIGNVEGRDILDGTVDVVVTDGFTGNVVL 237 (338)
T ss_pred HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCC--CCCEEEECCCCCCCCCCCCEEEECCCCHHHHH
T ss_conf 9999999999628899967887565535458789999999997487--77536522542123687778995796018999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 99888899999999986322208899999989999999972696870874674216148983889986899999999999
Q gi|254780498|r 250 KAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFDPRNFNGGVLLGVDGLVVKGHGSSDAKSIFNVLGIAHN 329 (364)
Q Consensus 250 Kt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~~~gGa~llGl~g~vik~HG~s~~~a~~~ai~~a~~ 329 (364)
||+||+++++.++||+++++++++|++++++++.|+++++++||++||||+||||+|+|||+||+||+++|++||++|++
T Consensus 238 Kt~EG~a~~i~~~lK~~~~~s~~~klgall~k~~~k~lk~k~d~~~~~Ga~llGl~giViKsHGsad~~a~~~AI~~a~~ 317 (338)
T COG0416 238 KTAEGTAKFILSLLKEEIKSSLKSKLGALLLKPALKRLKKKLDPSEYGGAVLLGLNGIVIKSHGSADARAFASAIRQAYE 317 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 98778999999999999887689999999875689999874886640982783167248971687578999999999999
Q ss_pred HHHCCHHHHHHHHHHHHHH
Q ss_conf 9960706899999999987
Q gi|254780498|r 330 MSQNGFIDMVKDDMQRVRD 348 (364)
Q Consensus 330 ~~~~~~~~~i~~~~~~~~~ 348 (364)
+++++++.+|+++++....
T Consensus 318 ~~~~~v~~~I~~~l~~~~~ 336 (338)
T COG0416 318 MVKSQVPQRIEARLEKLLA 336 (338)
T ss_pred HHHHHHHHHHHHHHHHHCC
T ss_conf 9998789999999986435
No 2
>PRK05331 putative glycerol-3-phosphate acyltransferase PlsX; Provisional
Probab=100.00 E-value=0 Score=837.84 Aligned_cols=316 Identities=43% Similarity=0.764 Sum_probs=309.6
Q ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHCC
Q ss_conf 23999974687778177799999999857991799978989999998626975155799778520177830679997137
Q gi|254780498|r 12 VDTISLDLMGGDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVSIAMDERPADALRRGR 91 (364)
Q Consensus 12 m~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~vI~mde~P~~AlR~kK 91 (364)
|||||||+||||++|+++|+|+..|++++|+++|+||||+++|++++++++.+.+|++|+||+++|+|+|+|+.|+|+||
T Consensus 1 mi~IAvDaMGGD~~P~~~v~Ga~~al~~~~d~~~~LvG~e~~i~~~l~~~~~~~~~i~iiha~~~V~m~d~p~~alR~kk 80 (317)
T PRK05331 1 MMKIAIDAMGGDFGPEVVVPGALQALKEHPDLEILLVGDEEKIKPLLAKYPALRERIEIVHASEVIGMDDKPSQALRRKK 80 (317)
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHCCC
T ss_conf 95899996698767288999999999878897699995899999999857776357589989965667888899986168
Q ss_pred CCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCC-CEEEEECCCCCCCCHHHHHHHH
Q ss_conf 642799999998549953999706426788888753225567632200110558898-4599861327778989999999
Q gi|254780498|r 92 NVSSMWRAIEAVKKNQAASVVTAGNTGALIAMARLCLSRISGVDRPSLAAFWPTVKG-KCIILDVGATIGSTVSHMVQLS 170 (364)
Q Consensus 92 ~~SSm~~a~~lvk~g~aDa~VSaGnTGA~la~a~~~lg~i~Gv~RPala~~~Pt~~g-~~vllD~GAN~d~~~~~L~qfA 170 (364)
+ ||||+|+++||+|++||+||||||||+|++++++|||+|||+||||+++|||.++ +++|||+|||+||+|++|+|||
T Consensus 81 ~-SSm~~ai~lvk~g~ada~VSaGnTGAl~a~a~~~l~~i~gi~RPaia~~~Pt~~~~~~~llD~GAN~~~~~~~L~qfA 159 (317)
T PRK05331 81 D-SSMRVALELVKEGEADACVSAGNTGALMAAALFVLGRLPGIDRPAIATILPTLNGGGTVLLDLGANVDCKPEHLVQFA 159 (317)
T ss_pred C-CHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCCHHHHHHHH
T ss_conf 8-719999999866887789954738999999999861205877641011143579973799967747877989999999
Q ss_pred HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHCCCCCCCEEEECCHHHHHHHH
Q ss_conf 99999999856899965899840455555657999999997402457132002345545324568389975512788999
Q gi|254780498|r 171 ILGSFFARSVAGINCPSIGLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFIEANDIAKGFVDVIVTEGFSGNIAIK 250 (364)
Q Consensus 171 ~mGs~yak~~~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~~i~~g~~DVvV~DGFtGNi~LK 250 (364)
+||++|+|.++++++|||||||||+|++||++++|+||+||++++ .+||+|||||+|||+|.+||||||||||||+||
T Consensus 160 ~mGs~ya~~v~~i~~PrVgLLNiG~E~~KG~~~~k~a~~lL~~~~--~~nf~G~iEg~di~~g~~DVvV~DGFtGNv~LK 237 (317)
T PRK05331 160 VMGSVYAEAVLGIENPRVGLLNIGEEEIKGNELVKEAYELLKAAP--SINFIGNVEGRDILKGTADVVVCDGFVGNVALK 237 (317)
T ss_pred HHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCC--CCCEEEEECCCCCCCCCCCEEEECCCCCHHHHH
T ss_conf 999999998479999828761587656676799999999996499--980580104011468999789928950189999
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 98888999999999863222088999999899999999726968708746742161489838899868999999999999
Q gi|254780498|r 251 AAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFDPRNFNGGVLLGVDGLVVKGHGSSDAKSIFNVLGIAHNM 330 (364)
Q Consensus 251 t~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~~~gGa~llGl~g~vik~HG~s~~~a~~~ai~~a~~~ 330 (364)
|+||++++++++||+++++++++|++++++++.|++++++|||++|||||||||||+|||+||+|+++||+|||++|++.
T Consensus 238 t~EG~~~~~~~~lk~~~~~~~~~k~~~ll~~~~l~~~~~~~d~~~~gGA~lLGl~g~vik~HG~S~~~a~~~AI~~A~~~ 317 (317)
T PRK05331 238 TSEGTAKMILSLLKEELKSSLLSKLGALLLKPALKRLKKKLDPREYGGAVLLGLNGIVIKSHGSSDAKAFKNAIRQAVEA 317 (317)
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCEEECCCCCCHHHHHHHHHHHHHC
T ss_conf 98779999999999998408899999999999999999866910229857974882289817899989999999999749
No 3
>TIGR00182 plsX fatty acid/phospholipid synthesis protein PlsX; InterPro: IPR003664 The plsX gene is part of the bacterial fab gene cluster which encodes several key fatty acid biosynthetic enzymes . The plsX gene encodes a poorly understood enzyme of phospholipid metabolism .; GO: 0003824 catalytic activity, 0006633 fatty acid biosynthetic process.
Probab=100.00 E-value=0 Score=837.65 Aligned_cols=334 Identities=37% Similarity=0.683 Sum_probs=325.0
Q ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCC
Q ss_conf 39999746877781777999999998579917999789899999986269751557997785201778306799971376
Q gi|254780498|r 13 DTISLDLMGGDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVSIAMDERPADALRRGRN 92 (364)
Q Consensus 13 ~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~vI~mde~P~~AlR~kK~ 92 (364)
+|||||+|||||+|.++|+|++++++++.+++|+||||++.+.++|.+.+....+++++||+++|+|+|.|+.|+|||++
T Consensus 1 ~riavD~mGgD~~P~~~i~gv~~~~~~~~~l~~~LVGD~~~i~~~L~~~~~~~~~~~~~~A~~~I~m~~~p~~AiRRK~~ 80 (344)
T TIGR00182 1 MRIAVDAMGGDHAPSEVIEGVLRYASENQDLSIILVGDKDAIEPLLDKLPKNQIKITIIHAQSVIEMTDTPVEAIRRKKN 80 (344)
T ss_pred CEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCC
T ss_conf 92788706888884467889999875108723898337255536753032136617887146652666115477541410
Q ss_pred CHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCC-C-CEEEEECCCCCCCCHHHHHHHH
Q ss_conf 4279999999854995399970642678888875322556763220011055889-8-4599861327778989999999
Q gi|254780498|r 93 VSSMWRAIEAVKKNQAASVVTAGNTGALIAMARLCLSRISGVDRPSLAAFWPTVK-G-KCIILDVGATIGSTVSHMVQLS 170 (364)
Q Consensus 93 ~SSm~~a~~lvk~g~aDa~VSaGnTGA~la~a~~~lg~i~Gv~RPala~~~Pt~~-g-~~vllD~GAN~d~~~~~L~qfA 170 (364)
|||++|+++||||+||||||||||||+|+++.+.||||+|++||||++++||.. + ++++||+|||+||+|++|+|||
T Consensus 81 -sSm~~a~~lVkeg~ADa~iSAG~sGa~m~la~l~lGri~G~~rPA~~t~~Pt~~P~~~~~~LDvGAN~dc~p~~L~~fA 159 (344)
T TIGR00182 81 -SSMQVAMNLVKEGRADAVISAGNSGALMGLALLRLGRIKGIERPALVTLLPTVNPKDKFVLLDVGANVDCKPKYLVQFA 159 (344)
T ss_pred -HHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHH
T ss_conf -2799999996269974899865389999998640454156766510142770118962699855567578843233441
Q ss_pred HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHCCCCCCCEEEECCHHHHHHHH
Q ss_conf 99999999856899965899840455555657999999997402457132002345545324568389975512788999
Q gi|254780498|r 171 ILGSFFARSVAGINCPSIGLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFIEANDIAKGFVDVIVTEGFSGNIAIK 250 (364)
Q Consensus 171 ~mGs~yak~~~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~~i~~g~~DVvV~DGFtGNi~LK 250 (364)
+||++|+|.+.++++|||||||||+|+.||++++||||++|++. ++|||+|||||||||+|.+||||||||+|||+||
T Consensus 160 lMG~vy~~~v~~~~sPkVgLLNiGeE~~KG~~l~~~t~~~Lk~~--~~inF~GnvE~rdlL~G~~DV~VcDGF~GNvvLK 237 (344)
T TIGR00182 160 LMGSVYAKKVLGVDSPKVGLLNIGEEDNKGNDLVKETFKLLKED--PNINFIGNVEARDLLDGVVDVLVCDGFTGNVVLK 237 (344)
T ss_pred HHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCC--CCCCEEEEECHHHHHCCCEEEEEECCCCCCHHHH
T ss_conf 01332111100058980562357650021356689999996228--8776065200054306864699843841315777
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHH---CCCEEEEEECCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 988889999999998632220889999998999999997269687---08746742161489838899868999999999
Q gi|254780498|r 251 AAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFDPRN---FNGGVLLGVDGLVVKGHGSSDAKSIFNVLGIA 327 (364)
Q Consensus 251 t~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~~---~gGa~llGl~g~vik~HG~s~~~a~~~ai~~a 327 (364)
|+||+++.+.+++|+.++++|.+|+++++.++.|+++++|+||.+ ||||+|||||++|||+||+|+..+|.+||++|
T Consensus 238 t~EGv~~~i~~~lK~~~~~~~rskl~al~~~~~lK~~~~k~dy~nPdqygGA~L~Gl~~~viksHGss~~~a~~~AIrqA 317 (344)
T TIGR00182 238 TMEGVAKTILSILKDELKSKLRSKLAALLLKPILKSLKQKFDYANPDQYGGAVLLGLNKLVIKSHGSSDSRAIFSAIRQA 317 (344)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 66899999999987524876543789987212456786314636754348837761473178723741035799999999
Q ss_pred HHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 9999607068999999999876
Q gi|254780498|r 328 HNMSQNGFIDMVKDDMQRVRDS 349 (364)
Q Consensus 328 ~~~~~~~~~~~i~~~~~~~~~~ 349 (364)
.+.++++++.+|+++++....+
T Consensus 318 ~~av~~qv~~~I~~~~~~~~p~ 339 (344)
T TIGR00182 318 KEAVKSQVINRIKSSLESLKPA 339 (344)
T ss_pred HHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999877999999988640343
No 4
>PRK13845 putative glycerol-3-phosphate acyltransferase PlsX; Provisional
Probab=100.00 E-value=0 Score=814.34 Aligned_cols=331 Identities=33% Similarity=0.551 Sum_probs=317.4
Q ss_pred CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCC--------CCCEEEECCCCCC
Q ss_conf 11389823999974687778177799999999857991799978989999998626975--------1557997785201
Q gi|254780498|r 6 VLQGGNVDTISLDLMGGDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLL--------KERSCFHHCEVSI 77 (364)
Q Consensus 6 ~~~~~~m~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~--------~~ri~Ii~a~~vI 77 (364)
.-+++..+-||||+||||++|.++++||+.|+++.| +++++||++++|+..++++.+. ..+++++|+.++|
T Consensus 88 ~i~~~~r~wiAvD~MGGD~aP~~i~~G~l~a~~~~~-~~i~~vg~~~~i~~~~~~~~~~e~~~~~~~~~~~~~v~s~~~i 166 (437)
T PRK13845 88 EISDSDRIWVAVDGMGGDYAPGPILEGCLQAISRLP-LNIKFVGEIEKVKEAAEALGLEELLEKAIDAGHLELIASGPSI 166 (437)
T ss_pred CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECCCCC
T ss_conf 235666069996057887786778899999998679-3599966779999999971606567765303757997179987
Q ss_pred CCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCC--CCEEEEEC
Q ss_conf 7783067999713764279999999854995399970642678888875322556763220011055889--84599861
Q gi|254780498|r 78 AMDERPADALRRGRNVSSMWRAIEAVKKNQAASVVTAGNTGALIAMARLCLSRISGVDRPSLAAFWPTVK--GKCIILDV 155 (364)
Q Consensus 78 ~mde~P~~AlR~kK~~SSm~~a~~lvk~g~aDa~VSaGnTGA~la~a~~~lg~i~Gv~RPala~~~Pt~~--g~~vllD~ 155 (364)
.|+|+ ..|+|+||+ |||++|+++||+|+||||||||||||+|++++|+|||||||+||||+++|||.+ +++++||+
T Consensus 167 ~m~e~-a~AVRrKKd-SSi~vA~~LVK~G~AdA~vSAGNTGAlmA~a~~~Lgri~GI~RPAIa~~~Pt~~~g~~~llLD~ 244 (437)
T PRK13845 167 GMDEE-ATAVRKKKD-ASINVAMDLVKKGKALAVYSAGNSGAMMASAIFRLGRLKGIDRPAIGALFPTKDPGQPVLVLDV 244 (437)
T ss_pred CCCCH-HHHHHHCCC-CHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHEECCCCCCCCCCCCEECCCCCCCCEEEEEEC
T ss_conf 87733-777760462-4899999998658776898368638999877611365799871410622676689973799978
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHCCCCCC
Q ss_conf 32777898999999999999999856899965899840455555657999999997402457132002345545324568
Q gi|254780498|r 156 GATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFIEANDIAKGFV 235 (364)
Q Consensus 156 GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~~i~~g~~ 235 (364)
|||+||+|+||+|||+||++|+|.++++++|||||||||+||.||++++|+||+||++. ++|||+|||||+|||+|.+
T Consensus 245 GANvdckpe~L~QFAiMGsiYAk~Vlgi~~PrVGLLNIGeEe~KGnel~keA~~LLk~~--~~iNFiGNVEGrDI~~G~~ 322 (437)
T PRK13845 245 GANMDCKPSYLHQFALLGNIYSRDVLQVKKPRIGLLNIGEEECKGNDLSLKTFELLSEE--KRFHFAGNCEGRDVLSGDF 322 (437)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCC--CCCCEECCCCCCCCCCCCC
T ss_conf 85899898999999999999999960999985787645664555639999999998608--8973315544010357878
Q ss_pred CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCEEEEECCCC
Q ss_conf 38997551278899998888999999999863222088999999899999999726968708746742161489838899
Q gi|254780498|r 236 DVIVTEGFSGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFDPRNFNGGVLLGVDGLVVKGHGSS 315 (364)
Q Consensus 236 DVvV~DGFtGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~~~gGa~llGl~g~vik~HG~s 315 (364)
||||||||||||+|||+||++++++++||+++++++++|++++++++.|+++++++||++|||||||||||+|||+||+|
T Consensus 323 DVVVcDGFtGNV~LKt~EG~a~~i~~~LK~~~~~s~~~Kigalllk~~Lk~lkkrlD~~eyGGApLLGlnGivIksHGsS 402 (437)
T PRK13845 323 DVVVCDGFTGNVLLKFLESVGSVLLDVLRAELPRGRRGKVGSAFLRSNLKRIKKRLDHAEHGGALLLGVNGICVIGHGSS 402 (437)
T ss_pred CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCEEEECCCC
T ss_conf 78995784018999987779999999999998747799999999999999998767900159966864785289807888
Q ss_pred CHHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 86899999999999996070689999
Q gi|254780498|r 316 DAKSIFNVLGIAHNMSQNGFIDMVKD 341 (364)
Q Consensus 316 ~~~a~~~ai~~a~~~~~~~~~~~i~~ 341 (364)
++.||+|||+.|++++++++++.|.+
T Consensus 403 ~A~Ai~nAIrvA~~~a~hgv~d~l~~ 428 (437)
T PRK13845 403 KALSVVSALRLAHSAASHGVMDDLAQ 428 (437)
T ss_pred CHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 88999999999999997580889986
No 5
>pfam02504 FA_synthesis Fatty acid synthesis protein. The plsX gene is part of the bacterial fab gene cluster which encodes several key fatty acid biosynthetic enzymes. The exact function of the plsX protein in fatty acid synthesis is unknown.
Probab=100.00 E-value=0 Score=813.23 Aligned_cols=321 Identities=40% Similarity=0.702 Sum_probs=312.1
Q ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCC
Q ss_conf 39999746877781777999999998579917999789899999986269751557997785201778306799971376
Q gi|254780498|r 13 DTISLDLMGGDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVSIAMDERPADALRRGRN 92 (364)
Q Consensus 13 ~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~vI~mde~P~~AlR~kK~ 92 (364)
||||||+||||++|+++|+|+..|++++|+++|+||||+++|.+++.+++. .+|++|+||+++|+|+|+|+.|+|+ |+
T Consensus 1 ikIAvDaMGGD~~P~~vv~Ga~~al~~~~~~~i~LvG~e~~i~~~l~~~~~-~~~i~iv~a~~~I~m~d~p~~a~Rk-k~ 78 (322)
T pfam02504 1 LRIAIDAMGGDHGPLEVVKGVLLAAKSAQDLDIVLVGDKDAIDPLVKEAEL-NSKLTIVHAEGVIEMEDTPLAAIRK-KK 78 (322)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHCCC-CCCCEEEECCCCCCCCCCHHHHHHC-CC
T ss_conf 989998259875848899999999987889769999299999999851676-5681899688801689888999863-68
Q ss_pred CHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCC-CEEEEECCCCCCCCHHHHHHHHH
Q ss_conf 42799999998549953999706426788888753225567632200110558898-45998613277789899999999
Q gi|254780498|r 93 VSSMWRAIEAVKKNQAASVVTAGNTGALIAMARLCLSRISGVDRPSLAAFWPTVKG-KCIILDVGATIGSTVSHMVQLSI 171 (364)
Q Consensus 93 ~SSm~~a~~lvk~g~aDa~VSaGnTGA~la~a~~~lg~i~Gv~RPala~~~Pt~~g-~~vllD~GAN~d~~~~~L~qfA~ 171 (364)
||||+|+++||+|++|++||||||||+|+++++++||+|||+||||++.|||.+| +++|||+|||+||+|++|+|||+
T Consensus 79 -SSm~~a~~lvk~g~ada~vSaGnTGA~~a~a~~~l~~i~gi~RPai~~~~Pt~~g~~~~lLD~GANv~~~~~~L~qFA~ 157 (322)
T pfam02504 79 -SSMAVAIDLVKEGEADAAVSAGNTGALMALAMLRLGRIKGITRPALGTELPTVNGKFTVLLDVGANVDCKPKELVQFAL 157 (322)
T ss_pred -CCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHH
T ss_conf -8199999997320378899537379999999998850058886446440455799758998478787779899999999
Q ss_pred HHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHCCCCCCCEEEECCHHHHHHHHH
Q ss_conf 99999998568999658998404555556579999999974024571320023455453245683899755127889999
Q gi|254780498|r 172 LGSFFARSVAGINCPSIGLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFIEANDIAKGFVDVIVTEGFSGNIAIKA 251 (364)
Q Consensus 172 mGs~yak~~~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~~i~~g~~DVvV~DGFtGNi~LKt 251 (364)
||++|+|.++++++|||||||||+|++||++++||||+||++++ ++||+|||||+|||+|.+||||||||||||+|||
T Consensus 158 mG~~ya~~~~~~~~PrVgLLNiG~E~~KG~~~~kea~~lL~~~~--~~nf~GnvEg~~i~~g~~DVvV~DGF~GNi~LKt 235 (322)
T pfam02504 158 MGSVYAQSLLGIDSPRVGLLNIGEEEVKGNDLHKQTFKLLKATP--GYNFLGNVEGRDILDGVVDVIVCDGFTGNVILKT 235 (322)
T ss_pred HHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCC--CCCEEEEECCCCCCCCCCCEEEECCCCCHHHHHH
T ss_conf 99999999729999808787556545465399999999998289--9844500130105789984899488400999999
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 88889999999998632220889999998999999997269687087467421614898388998689999999999999
Q gi|254780498|r 252 AEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFDPRNFNGGVLLGVDGLVVKGHGSSDAKSIFNVLGIAHNMS 331 (364)
Q Consensus 252 ~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~~~gGa~llGl~g~vik~HG~s~~~a~~~ai~~a~~~~ 331 (364)
+||+++++++.||+++++++++|++++++++.|+++++++||++|||||||||||+|||+||+|++.||+|||++|.+++
T Consensus 236 ~EG~~~~i~~~lk~~~~~~~~~k~~~ll~~~~l~~~~~~~d~~~~gGa~llGl~g~vvk~HG~S~~~a~~naI~~a~~~~ 315 (322)
T pfam02504 236 AEGVAKFIGSILKDELKRSKLSKLGALLLSKALKRLKKKFDYKEYGGAVLLGLSGLVIKSHGSADKTAIFAAIRQAIELV 315 (322)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 87899999999898852077889999999999999986389531198789758843897579999899999999999999
Q ss_pred HCCHHHH
Q ss_conf 6070689
Q gi|254780498|r 332 QNGFIDM 338 (364)
Q Consensus 332 ~~~~~~~ 338 (364)
++++++|
T Consensus 316 ~~~~i~k 322 (322)
T pfam02504 316 QTGVIVR 322 (322)
T ss_pred HHCCCCC
T ss_conf 8386679
No 6
>PRK13846 putative glycerol-3-phosphate acyltransferase PlsX; Provisional
Probab=100.00 E-value=0 Score=791.99 Aligned_cols=311 Identities=29% Similarity=0.512 Sum_probs=294.1
Q ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHH---HCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHH
Q ss_conf 239999746877781777999999998---57991799978989999998626975155799778520177830679997
Q gi|254780498|r 12 VDTISLDLMGGDLGARDLILGASKFLE---AHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVSIAMDERPADALR 88 (364)
Q Consensus 12 m~kIAVDaMGGD~~P~~vi~Ga~~al~---~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~vI~mde~P~~AlR 88 (364)
.||||||+||||++|+++++++..++. .+++++|+|+|+++.++++++.++. ..+++|+||+++|+|+|+|+.|+|
T Consensus 2 ~irIAvDaMGGD~aP~~vve~~~~al~~~~~~~~~~~~l~g~~~~~~~~l~~~~~-~~~~~iv~a~~vi~m~e~p~~alR 80 (316)
T PRK13846 2 KVQIGIDLMGGDHSPLVVWEVLGDVLLSSSSEQPVEFTVFASSEVHHQILSNSPL-SRSPKIIAAESFVSMEDSPLAAIR 80 (316)
T ss_pred CEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCC-CCCCEEECCCCCCCCCCCHHHHHH
T ss_conf 4699997548888744389999999984501798499997789999998734753-468579808972089998899876
Q ss_pred HCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCCHHHHHH
Q ss_conf 13764279999999854995399970642678888875322556763220011055889845998613277789899999
Q gi|254780498|r 89 RGRNVSSMWRAIEAVKKNQAASVVTAGNTGALIAMARLCLSRISGVDRPSLAAFWPTVKGKCIILDVGATIGSTVSHMVQ 168 (364)
Q Consensus 89 ~kK~~SSm~~a~~lvk~g~aDa~VSaGnTGA~la~a~~~lg~i~Gv~RPala~~~Pt~~g~~vllD~GAN~d~~~~~L~q 168 (364)
+ |+ ||||+|+++||+|++||+||||||||+|++++++|||++||+||||+++|||.+|+++|||+|||+||+|+||+|
T Consensus 81 k-k~-sSm~~a~~lvk~g~ada~VSaGnTGA~ma~a~~~lg~i~gv~RPaia~~~Pt~~g~~~lLD~GANvd~~p~~L~q 158 (316)
T PRK13846 81 K-KS-SSMALGLDYLQEDKLDAFISTGNTAALVTLARAKIPMFPAVPRPALLVSVPTMRGFAVILDVGANVSVNPEEMVG 158 (316)
T ss_pred C-CC-CHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCHHHHHH
T ss_conf 4-76-589999999976898889965737999999999870326987454533230789977999789787669999999
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHCCCCCCCEEEECCHHHHHH
Q ss_conf 99999999998568999658998404555556579999999974024571320023455453245683899755127889
Q gi|254780498|r 169 LSILGSFFARSVAGINCPSIGLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFIEANDIAKGFVDVIVTEGFSGNIA 248 (364)
Q Consensus 169 fA~mGs~yak~~~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~~i~~g~~DVvV~DGFtGNi~ 248 (364)
||+||++|+|.++++++|||||||||+|++||++++||||+||++.. .+||+|||||+|||+|++||||||||||||+
T Consensus 159 FA~MGs~ya~~~~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~--~~nF~GnvEg~di~~g~~DVvV~DGFtGNv~ 236 (316)
T PRK13846 159 FARMGLAYRQCLGSNQPPTIGLLNIGSEERKGTEAHRQTFRMLRETF--GSAFLGNIESGDVFSGKVDIVVTDGFTGNIF 236 (316)
T ss_pred HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCC--CCCEEEEECCCCCCCCCCCEEEECCCHHHHH
T ss_conf 99999999998469999869986256645465899999999986086--6663665341325799984899288431999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 99988889999999998632220889999998999999997269687087467421614898388998689999999999
Q gi|254780498|r 249 IKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFDPRNFNGGVLLGVDGLVVKGHGSSDAKSIFNVLGIAH 328 (364)
Q Consensus 249 LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~~~gGa~llGl~g~vik~HG~s~~~a~~~ai~~a~ 328 (364)
|||+||+++++.++|++.+. +.+++++||++|||||||||||+||||||+|+++||+|||++|.
T Consensus 237 LKt~EG~~~~l~~~l~~~l~----------------~~~k~~~d~~~ygGA~LLGl~Givvk~HGsS~~~a~~nAI~~a~ 300 (316)
T PRK13846 237 LKTAEGVFDFLRHILGDKLE----------------KDIKRQLDYTIYPGSIVCGLSKLVIKCHGKACGTSLFGGISGSI 300 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHH----------------HHHHHHCCHHHCCCEEEEECCCCEEECCCCCCHHHHHHHHHHHH
T ss_conf 99887899999999999999----------------99987558312699888707843897589999899999999999
Q ss_pred HHHHCCHHHHHHHHH
Q ss_conf 999607068999999
Q gi|254780498|r 329 NMSQNGFIDMVKDDM 343 (364)
Q Consensus 329 ~~~~~~~~~~i~~~~ 343 (364)
++++++++++|++++
T Consensus 301 ~~~~~~v~~kI~~~l 315 (316)
T PRK13846 301 DLARARVCSRILSRL 315 (316)
T ss_pred HHHHHCHHHHHHHHC
T ss_conf 999967789999862
No 7
>PRK05632 phosphate acetyltransferase; Reviewed
Probab=99.96 E-value=1.2e-27 Score=194.37 Aligned_cols=280 Identities=16% Similarity=0.131 Sum_probs=211.8
Q ss_pred CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCC-CCEEEECCCCCCCCCCHHHH
Q ss_conf 13898239999746877781777999999998579917999789899999986269751-55799778520177830679
Q gi|254780498|r 7 LQGGNVDTISLDLMGGDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLK-ERSCFHHCEVSIAMDERPAD 85 (364)
Q Consensus 7 ~~~~~m~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~-~ri~Ii~a~~vI~mde~P~~ 85 (364)
+......||.+ .=|. -.-++.+|...+++. -.+.+|+|+++.|+...++.++.. +.++|+++.+.-+---....
T Consensus 386 ~Ar~~~krIVl-pEg~---d~rvl~Aa~~~~~~g-ia~~iLlG~~~~i~~~~~~~gl~l~~~~~iidp~~~~~~y~~~~~ 460 (702)
T PRK05632 386 RARAAKKRIVL-PEGD---EPRTLKAAAICAERG-IADCVLLGNPEEIRRVAAAQGVDLPDGLEIIDPEEVRERYVAPLV 460 (702)
T ss_pred HHHHCCCEEEE-CCCC---CHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHH
T ss_conf 99747987996-7989---869999999999869-805999789999999999759997579889897157999999999
Q ss_pred HHHHCCCCH----------HHHHHHHHHHCCCCEEEEEE--CCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCEEEE
Q ss_conf 997137642----------79999999854995399970--642678888875322556763220011055889845998
Q gi|254780498|r 86 ALRRGRNVS----------SMWRAIEAVKKNQAASVVTA--GNTGALIAMARLCLSRISGVDRPSLAAFWPTVKGKCIIL 153 (364)
Q Consensus 86 AlR~kK~~S----------Sm~~a~~lvk~g~aDa~VSa--GnTGA~la~a~~~lg~i~Gv~RPala~~~Pt~~g~~vll 153 (364)
.+|++|+.+ ..|.|.+||+.|+|||+||. .+|..++.+++.++|+-||+...+-+.+|-..++..++-
T Consensus 461 ~lr~~kG~t~~~A~~~~~~~~~fg~mmv~~g~aDg~vsG~~~tt~~~irpalqii~~~pg~~~vss~f~m~~~~~~l~~~ 540 (702)
T PRK05632 461 ELRKHKGLTEEVAREQLEDNVVLGTMMLALGEVDGLVSGAVHTTANTIRPALQLIKTAPGSSLVSSVFFMLLPDQVLVYG 540 (702)
T ss_pred HHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCEEEEE
T ss_conf 99730898999999986074038999986489887940667680777756887647789984368899999579438996
Q ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC-CCCCC--CHHHHHHHHHHHHCCCCCCCEECCCCH---
Q ss_conf 613277789899999999999999985689996589984045-55556--579999999974024571320023455---
Q gi|254780498|r 154 DVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLLNVGT-EEIKG--NDVLQESARLLRGECCGAFKYKGFIEA--- 227 (364)
Q Consensus 154 D~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLLNiG~-E~~KG--~~~~kea~~LL~~~~~~~~nF~GniEg--- 227 (364)
||+.|+||++|+|+++|++.+..++. ||++ |||+|||.-+ .+++| .+.+++|.+++++.. ++|.+-|-+-.
T Consensus 541 Dc~vn~~P~aeqLa~IA~~sa~~a~~-fgi~-PrvAmLS~St~~s~~~~~~~kv~~A~~~~~~~~-pdl~idGe~q~DaA 617 (702)
T PRK05632 541 DCAINPDPTAEQLAEIAIQSADSAAA-FGIE-PRVAMLSYSTGTSGSGADVEKVREATRLARERR-PDLLIDGPLQYDAA 617 (702)
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHH-CCCC-CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHC-CCCEECCCCCCCEE
T ss_conf 03025897999999999999999998-1999-609997356899999942589999999999868-99876146523100
Q ss_pred -----------HHCCCCCCCEEEECC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf -----------453245683899755-12788999988889999999998632220889999998999999997269687
Q gi|254780498|r 228 -----------NDIAKGFVDVIVTEG-FSGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFDPRN 295 (364)
Q Consensus 228 -----------~~i~~g~~DVvV~DG-FtGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~~ 295 (364)
.--..|.++|+|.-. =+|||..|..+-.+ +..
T Consensus 618 ~~~~v~~~k~p~s~v~g~AnvlifP~L~~gNi~yk~~qr~~-----------------------------------~~~- 661 (702)
T PRK05632 618 VDPSVARSKAPNSPVAGRATVFIFPDLNTGNTTYKAVQRSA-----------------------------------GAV- 661 (702)
T ss_pred CCHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHC-----------------------------------CCE-
T ss_conf 58999996686897789883898999754669999999963-----------------------------------987-
Q ss_pred CCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 08746742161489838899868999999999999
Q gi|254780498|r 296 FNGGVLLGVDGLVVKGHGSSDAKSIFNVLGIAHNM 330 (364)
Q Consensus 296 ~gGa~llGl~g~vik~HG~s~~~a~~~ai~~a~~~ 330 (364)
.-|.+|.|+++||-.-..++...-|.|++-.+.--
T Consensus 662 aiGPil~Gl~kPv~~lsrg~~v~dIvn~~aitaiq 696 (702)
T PRK05632 662 SIGPMLQGLRKPVNDLSRGALVDDIVYTIALTAIQ 696 (702)
T ss_pred EECHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf 87637666585275569999789999999999999
No 8
>PRK12862 malic enzyme; Reviewed
Probab=99.96 E-value=1.3e-27 Score=194.04 Aligned_cols=283 Identities=16% Similarity=0.196 Sum_probs=220.4
Q ss_pred CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCC---CEEEECCCCCCCCCCH
Q ss_conf 1138982399997468777817779999999985799179997898999999862697515---5799778520177830
Q gi|254780498|r 6 VLQGGNVDTISLDLMGGDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKE---RSCFHHCEVSIAMDER 82 (364)
Q Consensus 6 ~~~~~~m~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~---ri~Ii~a~~vI~mde~ 82 (364)
.+...+..||.+ +=|- -.-++++|..++++. -.+.+|+|+++.|+..++++++..+ .++|+++.+.-..+ +
T Consensus 440 erAK~~PKRIVF-aEGE---DeRVLrAA~~~~~EG-Ia~PILlG~~~~I~~~a~~lGL~L~~~~~ieIIdP~~s~~~~-~ 513 (761)
T PRK12862 440 AAAKAAPKRVVF-AEGE---DERVLRAAQVVVDEG-LAKPILIGRPAVIEARIERAGLRLRPGQDFEVVNPEDDPRYR-D 513 (761)
T ss_pred HHHHHCCCEEEE-CCCC---CHHHHHHHHHHHHCC-CCCEEEECCHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHH-H
T ss_conf 999748866983-5887---778999999999759-961699679999999999869997767784456877458999-9
Q ss_pred HHH---HHHHCCCC-----------HHHHHHHHHHHCCCCEEEEE--ECCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCC
Q ss_conf 679---99713764-----------27999999985499539997--064267888887532255676322001105588
Q gi|254780498|r 83 PAD---ALRRGRNV-----------SSMWRAIEAVKKNQAASVVT--AGNTGALIAMARLCLSRISGVDRPSLAAFWPTV 146 (364)
Q Consensus 83 P~~---AlR~kK~~-----------SSm~~a~~lvk~g~aDa~VS--aGnTGA~la~a~~~lg~i~Gv~RPala~~~Pt~ 146 (364)
... .+|++|+. ...+.|.+||+.|+|||+|| .++|+..+..++.++|+.||+.+.+-+.+|-++
T Consensus 514 Y~~~l~elrqRKG~t~~~A~~~mr~d~nyFaAmMV~~GdADgmVsG~~~sya~tLRpalqIIg~~pG~~~vSs~~imi~~ 593 (761)
T PRK12862 514 YWDTYHALMGRKGVTPELARREVRRRTTLIGAMMVKRGEADAMICGTEGRYERHLEFVLQVIGKRPGVRVYAAMSLLILP 593 (761)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEC
T ss_conf 99999999864599999999998508404888898758888782388878799999999973679998158999999928
Q ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE---CCCCCCCCCHHHHHHHHHHHHCCCCCCCEEC
Q ss_conf 9845998613277789899999999999999985689996589984---0455555657999999997402457132002
Q gi|254780498|r 147 KGKCIILDVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLLN---VGTEEIKGNDVLQESARLLRGECCGAFKYKG 223 (364)
Q Consensus 147 ~g~~vllD~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLLN---iG~E~~KG~~~~kea~~LL~~~~~~~~nF~G 223 (364)
++..++.||+.|++|++|+|+++|++.+..+|. ||++ |||+||| .|+-.+.-.+.+++|.+++++.. ++|.|-|
T Consensus 594 ~g~lF~ADt~Vn~~PtAEqLAdIAi~aA~~ar~-fGie-PRVAmLSfSnfGS~~~~~~~KVreA~~il~er~-Pdl~vDG 670 (761)
T PRK12862 594 GRTLFLADTHVNEDPTAEELAEITILAAEEVRR-FGIE-PKVALLSHSNFGSSDSPSARKMREALEILRERA-PDLEVDG 670 (761)
T ss_pred CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH-CCCC-CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC-CCCEEEC
T ss_conf 960899626566797999999999999999998-3998-506888147778999963799999999999768-9988832
Q ss_pred CCCHH--------------HCCCCCCCEEEECCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 34554--------------532456838997551-278899998888999999999863222088999999899999999
Q gi|254780498|r 224 FIEAN--------------DIAKGFVDVIVTEGF-SGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVK 288 (364)
Q Consensus 224 niEg~--------------~i~~g~~DVvV~DGF-tGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~ 288 (364)
-.-.+ --+.|.++|+|.=.. +|||..|..+-+.
T Consensus 671 EMQ~DaAL~~~v~~~k~P~S~LaG~ANVLIFPnLdAaNIaYKLlqrlg-------------------------------- 718 (761)
T PRK12862 671 EMHGDAALDEELRKRIFPDSRLEGEANLLVFPNLDAANIAYNLLKTAA-------------------------------- 718 (761)
T ss_pred CCCHHHHCCHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHC--------------------------------
T ss_conf 674746549999995484896788893898899607789999999962--------------------------------
Q ss_pred HHCCHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 726968708746742161489838899868999999999999960
Q gi|254780498|r 289 EGFDPRNFNGGVLLGVDGLVVKGHGSSDAKSIFNVLGIAHNMSQN 333 (364)
Q Consensus 289 ~~~d~~~~gGa~llGl~g~vik~HG~s~~~a~~~ai~~a~~~~~~ 333 (364)
+...+ |.+|+|++++|-.-.-++++..|.|..-.+.--+++
T Consensus 719 ---ga~aI-GPIL~GL~kPV~~Lsrg~Sv~dIvNmaAIaavdAqa 759 (761)
T PRK12862 719 ---GALAV-GPILLGAAKPVHILTPSATVRRIVNMTALAVADANA 759 (761)
T ss_pred ---CCEEE-CHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf ---98697-725546797564579998699999999999997424
No 9
>PRK07232 malic enzyme; Reviewed
Probab=99.96 E-value=1.6e-27 Score=193.46 Aligned_cols=282 Identities=17% Similarity=0.190 Sum_probs=220.2
Q ss_pred CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCC---CCEEEECCCCCCCCCCH
Q ss_conf 113898239999746877781777999999998579917999789899999986269751---55799778520177830
Q gi|254780498|r 6 VLQGGNVDTISLDLMGGDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLK---ERSCFHHCEVSIAMDER 82 (364)
Q Consensus 6 ~~~~~~m~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~---~ri~Ii~a~~vI~mde~ 82 (364)
.+...+..||.+ +=| --..++.+|..++++. -.+.+|+|+++.|+..++++++.. +.++|+++.+.-.. ++
T Consensus 434 erAK~~pKRIVF-pEG---EDeRVLrAA~~~~~EG-Ia~PILlGr~~~I~~~a~elGL~l~~~~~ieIIdP~~s~~~-~~ 507 (753)
T PRK07232 434 AKAKKDPKRVVF-AEG---EEERVLRAAQEVVDEG-LAKPILIGRPSVIEARIKKLGLRLKAGVDFEIVNPEDDPRY-EE 507 (753)
T ss_pred HHHHHCCCEEEE-CCC---CCHHHHHHHHHHHHCC-CCCEEEECCHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHH-HH
T ss_conf 999748866982-588---7778999999999769-86258856999999999976999766777167688761789-99
Q ss_pred HH---HHHHHCCCCH-----------HHHHHHHHHHCCCCEEEEE--ECCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCC
Q ss_conf 67---9997137642-----------7999999985499539997--064267888887532255676322001105588
Q gi|254780498|r 83 PA---DALRRGRNVS-----------SMWRAIEAVKKNQAASVVT--AGNTGALIAMARLCLSRISGVDRPSLAAFWPTV 146 (364)
Q Consensus 83 P~---~AlR~kK~~S-----------Sm~~a~~lvk~g~aDa~VS--aGnTGA~la~a~~~lg~i~Gv~RPala~~~Pt~ 146 (364)
.. ..+|++|+-+ ..+.|.+||+.|+|||+|| .++|+..+..++.++|+.||+.+.+-+.+|-++
T Consensus 508 Ya~~~~elrqRKGvt~~~A~~lmr~d~nyFgAmMV~~GdADgmVsG~t~sya~tLRpalqVIg~~pGv~~Vsg~~iMi~~ 587 (753)
T PRK07232 508 YWQYYYELLQRRGVTPEDARRLVRRDRTVIGAMMVALGDADAMICGLTGRYHEHLRVVRQVIGLRPGVSRAAAMNLLLLK 587 (753)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEC
T ss_conf 99999999864599999999998638434899999758988781388888799999999863669998536888999927
Q ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE---CCCCCCCCCHHHHHHHHHHHHCCCCCCCEEC
Q ss_conf 9845998613277789899999999999999985689996589984---0455555657999999997402457132002
Q gi|254780498|r 147 KGKCIILDVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLLN---VGTEEIKGNDVLQESARLLRGECCGAFKYKG 223 (364)
Q Consensus 147 ~g~~vllD~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLLN---iG~E~~KG~~~~kea~~LL~~~~~~~~nF~G 223 (364)
++..++.||+.|++|++|+|+++|++.+..+|. ||++ |||+||| .|+-.+.-.+.+++|.+++++.. ++|.|-|
T Consensus 588 ~g~lF~ADt~Vn~~PtAEqLAdIAi~aA~~ar~-fGie-PRVAmLSfSnfGS~~~~~a~KVreAv~il~er~-PdlevDG 664 (753)
T PRK07232 588 GGTLFIADTYVNEDPTAEELAEIAIMAAEEVRR-FGIE-PRVALLSHSNFGSSDSPSARKMREAVELLDERA-PDLEVDG 664 (753)
T ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHH-CCCC-CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHC-CCCEEEC
T ss_conf 985899726367895999999999999999998-4999-708998047789999952789999999999768-9988813
Q ss_pred CCCHH--------------HCCCCCCCEEEECCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 34554--------------532456838997551-278899998888999999999863222088999999899999999
Q gi|254780498|r 224 FIEAN--------------DIAKGFVDVIVTEGF-SGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVK 288 (364)
Q Consensus 224 niEg~--------------~i~~g~~DVvV~DGF-tGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~ 288 (364)
-.-.+ --+.|.++|+|.-.. +|||..|..+-+.
T Consensus 665 EMQ~DaAL~~~v~~~k~PfS~L~G~ANVLIFPnLdAaNIaYKLlq~lg-------------------------------- 712 (753)
T PRK07232 665 EMHGDAALNEEIRKRLYPFSRLKGSANVLVMPNLDAANISYNLLKELG-------------------------------- 712 (753)
T ss_pred CCCHHHHCCHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHC--------------------------------
T ss_conf 675604439999996584896788885898899756789999999963--------------------------------
Q ss_pred HHCCHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 72696870874674216148983889986899999999999996
Q gi|254780498|r 289 EGFDPRNFNGGVLLGVDGLVVKGHGSSDAKSIFNVLGIAHNMSQ 332 (364)
Q Consensus 289 ~~~d~~~~gGa~llGl~g~vik~HG~s~~~a~~~ai~~a~~~~~ 332 (364)
+. ..=|.+|+|++++|-.-.-++++..|.|..-.+.--+|
T Consensus 713 ---ga-~aIGPIL~GL~KPVhiLsrgaSv~dIVNmaAIaavdAQ 752 (753)
T PRK07232 713 ---GG-VTIGPILLGMAKPVHILTPSATVRRIVNMTALAVVDAQ 752 (753)
T ss_pred ---CC-EEECHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHC
T ss_conf ---98-69873555679746457999859999999999998601
No 10
>PRK09653 eutD phosphotransacetylase; Reviewed
Probab=99.96 E-value=1.2e-26 Score=187.92 Aligned_cols=287 Identities=18% Similarity=0.214 Sum_probs=219.6
Q ss_pred CCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCC
Q ss_conf 74311138982399997468777817779999999985799179997898999999862697515579977852017783
Q gi|254780498|r 2 NQMDVLQGGNVDTISLDLMGGDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVSIAMDE 81 (364)
Q Consensus 2 ~~~~~~~~~~m~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~vI~mde 81 (364)
+++.-+..++..||++= =| + -..+++++..+.++. -.+.+|+|+++.|+..+++.++..+.++|+|+.+.-..++
T Consensus 5 ~~i~~~ar~~~krIv~a-eg-e--d~rvL~Aa~~~~~~g-i~~pILvG~~~~I~~~~~~~gl~l~~~eIidp~~~~~~~~ 79 (324)
T PRK09653 5 ERLKEKALGKKKKIVLP-EG-E--DERVLEAAKRLQKEG-LVEPILLGNPEEIREKALELGVDLDGIEIIDPHTYPKLEE 79 (324)
T ss_pred HHHHHHHHHCCCEEEEE-CC-C--CHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHCCCCCCCCEEECCCCCHHHHH
T ss_conf 99999996189989993-87-9--989999999999869-9589997799999999997699965758978998589999
Q ss_pred HHHH---HHHHCCC---------CHHHHHHHHHHHCCCCEEEEEEC---CHHHHHHHHHHHCCCCCCCCCCCHHHCCCCC
Q ss_conf 0679---9971376---------42799999998549953999706---4267888887532255676322001105588
Q gi|254780498|r 82 RPAD---ALRRGRN---------VSSMWRAIEAVKKNQAASVVTAG---NTGALIAMARLCLSRISGVDRPSLAAFWPTV 146 (364)
Q Consensus 82 ~P~~---AlR~kK~---------~SSm~~a~~lvk~g~aDa~VSaG---nTGA~la~a~~~lg~i~Gv~RPala~~~Pt~ 146 (364)
... .+|+.|. ....+.|.+||+.|+||++++ | +|.-++.+++.++|+.+|+.+.+-..+|...
T Consensus 80 -~~~~~~~~r~~k~~~~~A~~~~~~~~~~aa~mv~~G~aD~lv~-G~~~~t~~~lr~~l~iig~~~g~~~vS~~~~m~~~ 157 (324)
T PRK09653 80 -FAEAFVERRKGKATEEDARKILKDPNYFGTMLVKMGKADGMVS-GAIHSTADTLRPALQIIKTKPGVKTVSSIFIMVKG 157 (324)
T ss_pred -HHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCEEEC-CCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECC
T ss_conf -9999999856889899999987474289999986799875852-61020199999999884258998603689999617
Q ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE---CCCCCCCCCHHHHHHHHHHHHCCCCCCCEEC
Q ss_conf 9845998613277789899999999999999985689996589984---0455555657999999997402457132002
Q gi|254780498|r 147 KGKCIILDVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLLN---VGTEEIKGNDVLQESARLLRGECCGAFKYKG 223 (364)
Q Consensus 147 ~g~~vllD~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLLN---iG~E~~KG~~~~kea~~LL~~~~~~~~nF~G 223 (364)
++..++.|++.|++|++|+|+++|......+|. +|++ |||++|+ .|+-.+.-...+++|.+++++.. +++.+-|
T Consensus 158 ~~~l~~tD~avn~~P~~eqla~Ia~~a~~~~~~-lG~e-PrVA~LS~S~~gs~~~~s~~~~~~A~~~~~~~~-p~~~vdG 234 (324)
T PRK09653 158 DERYIFADCAVNPNPTAQQLAEIAINSAETAKA-FGIE-PKVAMLSFSTKGSAKGPEVDKVQEATEIAKELA-PDLEIDG 234 (324)
T ss_pred CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH-CCCC-CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC-CCCEECC
T ss_conf 855999537656798999999999999999998-5999-838861001047988700589999999999668-9974247
Q ss_pred CCCHH--------------HCCCCCCCEEEECCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 34554--------------532456838997551-278899998888999999999863222088999999899999999
Q gi|254780498|r 224 FIEAN--------------DIAKGFVDVIVTEGF-SGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVK 288 (364)
Q Consensus 224 niEg~--------------~i~~g~~DVvV~DGF-tGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~ 288 (364)
..-.+ .-+.|.+||+|.=.. +|||+-|...-++
T Consensus 235 elq~D~Al~~~~a~~k~p~s~vaG~AnvLI~Pnl~agNi~yK~l~~l~-------------------------------- 282 (324)
T PRK09653 235 ELQFDAAFVPEVAAQKAPGSPVAGKANVFVFPSLEAGNIGYKIAQRLG-------------------------------- 282 (324)
T ss_pred CCHHHHHCCHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHC--------------------------------
T ss_conf 410666539999985189997689887899488178899999999957--------------------------------
Q ss_pred HHCCHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 7269687087467421614898388998689999999999999607
Q gi|254780498|r 289 EGFDPRNFNGGVLLGVDGLVVKGHGSSDAKSIFNVLGIAHNMSQNG 334 (364)
Q Consensus 289 ~~~d~~~~gGa~llGl~g~vik~HG~s~~~a~~~ai~~a~~~~~~~ 334 (364)
+++.+ |.+|+|++.||+...-+++...+.|.+-.+.--.|++
T Consensus 283 ---~a~~~-Gpil~G~~~Pv~~~sr~~sv~di~n~~aiaa~~aq~~ 324 (324)
T PRK09653 283 ---GFEAV-GPILQGLNKPVNDLSRGCSVEDIYNLALITAAQAQNE 324 (324)
T ss_pred ---CCEEE-CHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf ---98387-4455377888787899888999999999999996159
No 11
>pfam01515 PTA_PTB Phosphate acetyl/butaryl transferase. This family contains both phosphate acetyltransferase and phosphate butaryltransferase. These enzymes catalyse the transfer of an acetyl or butaryl group to orthophosphate.
Probab=99.96 E-value=1.3e-26 Score=187.77 Aligned_cols=282 Identities=17% Similarity=0.177 Sum_probs=219.0
Q ss_pred CCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCC
Q ss_conf 74311138982399997468777817779999999985799179997898999999862697515579977852017783
Q gi|254780498|r 2 NQMDVLQGGNVDTISLDLMGGDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVSIAMDE 81 (364)
Q Consensus 2 ~~~~~~~~~~m~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~vI~mde 81 (364)
..+..+..++..||++ +=|- -..+++++..+.++. -.+.+|+|++++|+..+++.++..+.++|+++.+.-..++
T Consensus 4 ~~i~~~ak~~~krIvf-~ege---d~rvl~Aa~~~~~eg-i~~PILvG~~~~I~~~~~~~gl~~~~~eIid~~~~~~~~~ 78 (319)
T pfam01515 4 ERIFERAKSAKKRIVF-PEGE---DERVLKAAKELLEEG-IADPILIGNEIEIKAKALGLGLDLSGIEIVDPETSPRDEE 78 (319)
T ss_pred HHHHHHHHHCCCEEEE-ECCC---CHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHCCCCCCCCEEECCCCCHHHHH
T ss_conf 9999999848998999-5879---979999999999869-9279998899999999997698966778988888767999
Q ss_pred --HHHHHHHHCCCC----------HHHHHHHHHHHCCCCEEEEEECC---HHHHHHHHHHHCCCCCCCCCCCHHHCCCCC
Q ss_conf --067999713764----------27999999985499539997064---267888887532255676322001105588
Q gi|254780498|r 82 --RPADALRRGRNV----------SSMWRAIEAVKKNQAASVVTAGN---TGALIAMARLCLSRISGVDRPSLAAFWPTV 146 (364)
Q Consensus 82 --~P~~AlR~kK~~----------SSm~~a~~lvk~g~aDa~VSaGn---TGA~la~a~~~lg~i~Gv~RPala~~~Pt~ 146 (364)
.-...+|++|+. ...+.|.+||+.|+||++++ |. |..++.+++.++|..||+.+.+-+.+|-.+
T Consensus 79 y~~~~~~~~~rkG~~~~~a~~~~~~~~~~aa~mv~~G~aD~lv~-G~~~tt~~~lr~~l~~ig~~~~~~~~s~~~~m~~~ 157 (319)
T pfam01515 79 YADEFYELRKHKGMTPEIAREIVRDPTYFAAMLVKLGEADGLVS-GAVNTTADTLRPALQIIKTLPGVKIVSSVFIMLLP 157 (319)
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE-CCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEC
T ss_conf 99999999723899999999999766999999997789887820-89888299999999986578998459999987717
Q ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE---CCCCCCCCCHHHHHHHHHHHHCCCCCCCEEC
Q ss_conf 9845998613277789899999999999999985689996589984---0455555657999999997402457132002
Q gi|254780498|r 147 KGKCIILDVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLLN---VGTEEIKGNDVLQESARLLRGECCGAFKYKG 223 (364)
Q Consensus 147 ~g~~vllD~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLLN---iG~E~~KG~~~~kea~~LL~~~~~~~~nF~G 223 (364)
++..++.||+.|++|++++|+++|+..+..+|. +|...|||++|+ .|+..+.-+..++++.+++++.. +++++-|
T Consensus 158 ~~~lf~aD~~Vn~~P~~eqla~Ia~~aa~~~~~-lg~~~PkVA~LS~S~~gs~~~~~~~~~~~a~~~~~~~~-pd~~vdG 235 (319)
T pfam01515 158 DRLLFFTDCAVNPNPTAEELAEIALNAAKTAKA-LGNIEPRVAMLSYSTFGSGKGESVEKVREATKIAKEKA-PDLVVDG 235 (319)
T ss_pred CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH-HCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCC-CCCEECC
T ss_conf 953999706366698999999999999999998-45899704554202567999952899999999997369-9963368
Q ss_pred CCCH--------------HHCCCCCCCEEEECCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 3455--------------4532456838997551-278899998888999999999863222088999999899999999
Q gi|254780498|r 224 FIEA--------------NDIAKGFVDVIVTEGF-SGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVK 288 (364)
Q Consensus 224 niEg--------------~~i~~g~~DVvV~DGF-tGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~ 288 (364)
-.-. .--+.|.+||+|.=.. +|||..|..+-++
T Consensus 236 emq~D~Al~~~~~~~k~p~s~l~G~AnvLIfPnl~agNI~yK~~~~l~-------------------------------- 283 (319)
T pfam01515 236 ELQLDAAIVEEVAAQKAPDSPVAGKANVLVFPDLEAGNIGYKIAQRLA-------------------------------- 283 (319)
T ss_pred CCHHHHHCCHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHC--------------------------------
T ss_conf 630777649999997489998789888899289488899999999845--------------------------------
Q ss_pred HHCCHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 726968708746742161489838899868999999999
Q gi|254780498|r 289 EGFDPRNFNGGVLLGVDGLVVKGHGSSDAKSIFNVLGIA 327 (364)
Q Consensus 289 ~~~d~~~~gGa~llGl~g~vik~HG~s~~~a~~~ai~~a 327 (364)
++. .-|.+|+|++.||+...-++++..+.|.+-.|
T Consensus 284 ---~~~-~iGpil~G~~~Pv~~~sr~~s~~di~n~~ala 318 (319)
T pfam01515 284 ---GAE-AIGPILQGLAKPVNDLSRGASVEDIVNTIAIT 318 (319)
T ss_pred ---CCE-EECHHHHCCCCCEEECCCCCCHHHHHHHHHHH
T ss_conf ---986-97235546799779789988889999999985
No 12
>PRK12861 malic enzyme; Reviewed
Probab=99.96 E-value=1.7e-26 Score=187.05 Aligned_cols=283 Identities=14% Similarity=0.179 Sum_probs=220.2
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCC---CCEEEECCCCCCCCCCHHH-
Q ss_conf 898239999746877781777999999998579917999789899999986269751---5579977852017783067-
Q gi|254780498|r 9 GGNVDTISLDLMGGDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLK---ERSCFHHCEVSIAMDERPA- 84 (364)
Q Consensus 9 ~~~m~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~---~ri~Ii~a~~vI~mde~P~- 84 (364)
+++..||.+ +=| --+.++.+|..++++. -.+.+|+|++++|+..++++++.. +.++|+++...-..+ +..
T Consensus 443 ~~~pKRIVF-aEG---EdeRVLRAAq~~~dEG-ia~PILIGr~e~I~~~i~~lGL~L~~~~dieIiDP~~s~r~~-~Ya~ 516 (762)
T PRK12861 443 DGGKARIVF-TEG---EDERVLRAVQVIVDEK-LARPILVGRPEVLLARIERFGLRLRLGQDVEVTNPEYDERFP-QYWT 516 (762)
T ss_pred CCCCCEEEE-CCC---CCHHHHHHHHHHHHCC-CCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH-HHHH
T ss_conf 568746992-488---7768999999999749-842899729999999999819996656665301788650489-9999
Q ss_pred --HHHHHCCCCH-----------HHHHHHHHHHCCCCEEEEE--ECCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCC
Q ss_conf --9997137642-----------7999999985499539997--064267888887532255676322001105588984
Q gi|254780498|r 85 --DALRRGRNVS-----------SMWRAIEAVKKNQAASVVT--AGNTGALIAMARLCLSRISGVDRPSLAAFWPTVKGK 149 (364)
Q Consensus 85 --~AlR~kK~~S-----------Sm~~a~~lvk~g~aDa~VS--aGnTGA~la~a~~~lg~i~Gv~RPala~~~Pt~~g~ 149 (364)
..+|++|+-+ .-+.|.+||+.|+|||+|| .++|+..+..++.++|+-||+.+.+-+.+|-++++.
T Consensus 517 ~y~elrqRKGvt~~~Ar~~vr~~~n~FgAmMV~~GdADgMV~G~t~~ya~~LrpalqVIG~~pg~~~vs~~~lmi~~~~~ 596 (762)
T PRK12861 517 TYWELRCRDGISKEMARVEMRRRLTLIGAMMVRLGDADGMICGTVGEYHNHLRFVDEVIGRKPGASTYAAMNILLLDQRT 596 (762)
T ss_pred HHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCC
T ss_conf 99999752799899999997358510678798738877784378877099999999961889998447888899838962
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE---CCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCC
Q ss_conf 5998613277789899999999999999985689996589984---0455555657999999997402457132002345
Q gi|254780498|r 150 CIILDVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLLN---VGTEEIKGNDVLQESARLLRGECCGAFKYKGFIE 226 (364)
Q Consensus 150 ~vllD~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLLN---iG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniE 226 (364)
.++.|+..|++|++|+|+++|++.+..+|. ||++ |||+||| .|+-.+.-.+.+++|.++|++.. ++|.|-|-.-
T Consensus 597 lF~ADT~Vn~~PtAEqLAeIAi~aA~~ar~-fGie-PRVAmLSfSnFGS~~~~~~~KVreAveil~er~-PdlevDGEMQ 673 (762)
T PRK12861 597 VALVDTHVNDNPDAEQIAEFTIAAARQMEW-LNLT-PKVALLSRSNFGSGSAASGVKMRRALEIVREQA-PDIEADGEMH 673 (762)
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHHHH-CCCC-CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC-CCCEEECCCC
T ss_conf 899726254587999999999999999998-3999-738998057899999971579999999999748-9968833787
Q ss_pred HHH--------------CCCCCCCEEEECCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 545--------------32456838997551-278899998888999999999863222088999999899999999726
Q gi|254780498|r 227 AND--------------IAKGFVDVIVTEGF-SGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGF 291 (364)
Q Consensus 227 g~~--------------i~~g~~DVvV~DGF-tGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~ 291 (364)
++- -+.|.++|+|.=.. +|||..|..+- . .
T Consensus 674 ~DaAL~~~v~~~~~PfS~L~G~ANVLIfPnLdAANIaYKLlq~-----------~------------------------~ 718 (762)
T PRK12861 674 GDCALDEGLRARLLPMSPLKGAANLLVCPNVDAGNIAYNLLKT-----------E------------------------A 718 (762)
T ss_pred CCHHCCHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHH-----------H------------------------C
T ss_conf 1410589999855818967787848988996178999999999-----------6------------------------3
Q ss_pred CHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHCCH
Q ss_conf 96870874674216148983889986899999999999996070
Q gi|254780498|r 292 DPRNFNGGVLLGVDGLVVKGHGSSDAKSIFNVLGIAHNMSQNGF 335 (364)
Q Consensus 292 d~~~~gGa~llGl~g~vik~HG~s~~~a~~~ai~~a~~~~~~~~ 335 (364)
.....-|.+|+|++++|-+..-++++.-|.|..-.|.--++.|+
T Consensus 719 G~~vaIGPIL~Gl~KPVhiLsrgaSV~dIVNmaAIAavdAq~nv 762 (762)
T PRK12861 719 GSNVAVGPFLLGVNAPVNILTSSATVRRIVNMAALTVIEANRNV 762 (762)
T ss_pred CCCCEECHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 99855561755689860348999878999999999999864059
No 13
>COG0280 Pta Phosphotransacetylase [Energy production and conversion]
Probab=99.94 E-value=3e-24 Score=172.79 Aligned_cols=282 Identities=17% Similarity=0.170 Sum_probs=213.7
Q ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCC---CCHHHH
Q ss_conf 89823999974687778177799999999857991799978989999998626975155799778520177---830679
Q gi|254780498|r 9 GGNVDTISLDLMGGDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVSIAM---DERPAD 85 (364)
Q Consensus 9 ~~~m~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~vI~m---de~P~~ 85 (364)
.+...||.++- |+ -+.++.++...+++ .-...+|+|+++.|+..++...+..+.++|+++...-.. ..+...
T Consensus 10 ~~~~kriv~~E--ge--d~rvl~Aa~~~~~~-g~~~~ilvg~~~~i~~~~~~~gl~l~~~eiidp~~~~~~~~~y~~~~~ 84 (327)
T COG0280 10 RKAPKRIVLPE--GE--EERVLRAAQVLAKE-GLAKPILVGRPEEIEEVAKALGLDLDGIEIINPELDPERFEEYVDRLY 84 (327)
T ss_pred HHCCCEEEECC--CC--CHHHHHHHHHHHHC-CCCCEEEECCHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHH
T ss_conf 51687698168--74--37999999999865-977528974899999999983546564478672227066899999999
Q ss_pred HHHHCCC-----------CHHHHHHHHHHHCCCCEEEEE--ECCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCEEE
Q ss_conf 9971376-----------427999999985499539997--064267888887532255676322001105588984599
Q gi|254780498|r 86 ALRRGRN-----------VSSMWRAIEAVKKNQAASVVT--AGNTGALIAMARLCLSRISGVDRPSLAAFWPTVKGKCII 152 (364)
Q Consensus 86 AlR~kK~-----------~SSm~~a~~lvk~g~aDa~VS--aGnTGA~la~a~~~lg~i~Gv~RPala~~~Pt~~g~~vl 152 (364)
.+|+.|+ +..-+.|.+||+.|+||++|| .++|.-++..++.++|+-||+...+-..+|-..++.+++
T Consensus 85 e~~k~kG~t~~~a~~~~~~d~~~~a~~mv~~g~aD~~v~G~~~tt~~~lr~~lqii~~~pG~~~~s~v~im~~~~~~l~~ 164 (327)
T COG0280 85 ELRKRKGVTPEDAQELVREDPTVFAAMMVALGEADGLVSGAVHTTADTLRPALQIIGTRPGVSLVSSVFIMLLPDGTLFF 164 (327)
T ss_pred HHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCEEEE
T ss_conf 99643799999999885448089999999759887897557667798998899870888987667878999937960899
Q ss_pred EECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE---CCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHH-
Q ss_conf 8613277789899999999999999985689996589984---045555565799999999740245713200234554-
Q gi|254780498|r 153 LDVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLLN---VGTEEIKGNDVLQESARLLRGECCGAFKYKGFIEAN- 228 (364)
Q Consensus 153 lD~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLLN---iG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~- 228 (364)
-||..|++|++|+|+++|++.+..+|. +|++ |||+||| .|+..+..++-++||.+++++....++.+-|-.-.+
T Consensus 165 ~D~avn~~PtaeeladIa~~sa~~a~~-fgi~-PkVAlLS~St~gs~~~~~~~kv~ea~~i~~~~~~~dl~vDGelq~Da 242 (327)
T COG0280 165 ADCAVNPDPTAEELADIAENAAETARR-FGIE-PKVALLSYSTFGSGKGPSTDKVREATKILRERAPPDLEVDGELQFDA 242 (327)
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHHHH-HCCC-CEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCHHH
T ss_conf 713357897999999999999999998-0898-70689975427888881079999999999716975666606752435
Q ss_pred -------------HCCCCCCCEEEECCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf -------------532456838997551-278899998888999999999863222088999999899999999726968
Q gi|254780498|r 229 -------------DIAKGFVDVIVTEGF-SGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFDPR 294 (364)
Q Consensus 229 -------------~i~~g~~DVvV~DGF-tGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~ 294 (364)
--+.|.+||+|-... +|||..|...-++ ++
T Consensus 243 A~~~~va~~k~p~s~vaG~ANvlVfP~LeagNI~yK~lq~~~-----------------------------------~a- 286 (327)
T COG0280 243 ALVEKVAAKKAPDSPLAGSANVLVFPDLEAGNIGYKLLQRLG-----------------------------------GA- 286 (327)
T ss_pred HCCHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHC-----------------------------------CC-
T ss_conf 539999995389997678777897488217778999999953-----------------------------------78-
Q ss_pred HCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 708746742161489838899868999999999999960
Q gi|254780498|r 295 NFNGGVLLGVDGLVVKGHGSSDAKSIFNVLGIAHNMSQN 333 (364)
Q Consensus 295 ~~gGa~llGl~g~vik~HG~s~~~a~~~ai~~a~~~~~~ 333 (364)
..-|.+|+|++++|..---+.+..-+.|.+-.+.-..+.
T Consensus 287 ~avGPil~G~~kPV~~lSrg~sv~dIvn~~alaa~qa~~ 325 (327)
T COG0280 287 LAVGPILQGLAKPVNDLSRGASVEDIVNMAALAAVQAQT 325 (327)
T ss_pred CEECHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 556002425766532358889889999999999998623
No 14
>TIGR00651 pta phosphate acetyltransferase; InterPro: IPR004614 Phosphate acetyltransferase (2.3.1.8 from EC) catalyses the conversion of acetyl-CoA and phosphate to CoA and acetyl phosphate in the last two steps in the conversion of actetae to acetyl-CoA.; GO: 0016407 acetyltransferase activity.
Probab=99.92 E-value=8.3e-24 Score=170.02 Aligned_cols=255 Identities=19% Similarity=0.248 Sum_probs=186.0
Q ss_pred HHHHHHHHHHHHHCCCCE-EEEECCHHHHHH--HHHHCCCCCCCEEEECCCCCCCCCCHHHH---HHHHCCCCH------
Q ss_conf 777999999998579917-999789899999--98626975155799778520177830679---997137642------
Q gi|254780498|r 27 RDLILGASKFLEAHPRIR-FLMYGDAKVCLP--ILDSHPLLKERSCFHHCEVSIAMDERPAD---ALRRGRNVS------ 94 (364)
Q Consensus 27 ~~vi~Ga~~al~~~~~i~-iiLvGdee~I~~--~l~~~~~~~~ri~Ii~a~~vI~mde~P~~---AlR~kK~~S------ 94 (364)
.-++++|..-.+++ -+. ++|++.++.+.. ..........++.|+++...-.+ |..+. .+||.|+.+
T Consensus 9 ~R~LkAa~~l~~~~-i~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~-E~Y~~~~~e~RK~KG~t~~~A~~ 86 (322)
T TIGR00651 9 PRVLKAAALLAERG-IATPVVLGNKEEIVKNAKEAANCNLDLGKVVIIDPDVSPDR-ESYAERYYELRKHKGVTLAQARK 86 (322)
T ss_pred HHHHHHHHHHHHCC-CCCCEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHH-HHHHHHHHHHHCCCCCCHHHHHH
T ss_conf 65899999998578-74312332724677889998732511374588278674227-99999999874155604799999
Q ss_pred ----HHHHHHHHHHCCCCEEEEEEC---CHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCC------------CCEEEEEC
Q ss_conf ----799999998549953999706---42678888875322556763220011055889------------84599861
Q gi|254780498|r 95 ----SMWRAIEAVKKNQAASVVTAG---NTGALIAMARLCLSRISGVDRPSLAAFWPTVK------------GKCIILDV 155 (364)
Q Consensus 95 ----Sm~~a~~lvk~g~aDa~VSaG---nTGA~la~a~~~lg~i~Gv~RPala~~~Pt~~------------g~~vllD~ 155 (364)
..+.|++||..|+|||+|| | .|.-++.+++.+|+|.||++--.=.-+|-+.+ +.+++-||
T Consensus 87 ~l~D~~~fa~~mv~~g~aDg~Vs-Ga~~tTa~tlRpaLqiI~T~~Gvk~vSSvFiM~~~~~~~nvdfC~G~~~~l~F~DC 165 (322)
T TIGR00651 87 QLRDESYFATMMVALGEADGLVS-GAVHTTADTLRPALQIIKTLPGVKIVSSVFIMDTNETALNVDFCFGTREVLVFADC 165 (322)
T ss_pred HHHCHHHHHHHHHHCCCCCEEEE-CCHHHHHHHCCHHHHHHCCCCCCEEEEEEEEECCCCCCCEEEECCCCCCEEEEEEE
T ss_conf 73045789999987087432550-40230265404256652037885068777886588862101002574412688512
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC---CCC--CCCCCHHHHHHHHHHHHCCCCCC--CEECCCC--
Q ss_conf 32777898999999999999999856899965899840---455--55565799999999740245713--2002345--
Q gi|254780498|r 156 GATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLLNV---GTE--EIKGNDVLQESARLLRGECCGAF--KYKGFIE-- 226 (364)
Q Consensus 156 GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLLNi---G~E--~~KG~~~~kea~~LL~~~~~~~~--nF~GniE-- 226 (364)
..||+|++++|+++|+-.+..||.+.++| |||+|||. ||= .++-.+-|++|-++++|.. ++| .+-|-.-
T Consensus 166 Av~~~P~a~~LAeIA~~sA~sak~f~~~e-pkVAlLSYST~gSgGd~g~~veKV~~A~~I~~Ek~-pdL~~~~dGELQ~D 243 (322)
T TIGR00651 166 AVNVDPNAEQLAEIAIQSAKSAKSFGEIE-PKVALLSYSTKGSGGDSGEEVEKVREATRIAKEKR-PDLKATIDGELQFD 243 (322)
T ss_pred EEECCCCHHHHHHHHHHHHHHHHHHCCCC-CEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC-HHHHHHCCCCHHHH
T ss_conf 45029887899999999999999846899-60899830245565554133389999999985387-13764058730111
Q ss_pred ------------HHHCCCCCCCEEEECCH----HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf ------------54532456838997551----27889999888899999999986322208899999989999999972
Q gi|254780498|r 227 ------------ANDIAKGFVDVIVTEGF----SGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEG 290 (364)
Q Consensus 227 ------------g~~i~~g~~DVvV~DGF----tGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~ 290 (364)
|+=.+.|+++|.| | +|||--|..+= .
T Consensus 244 AA~v~~Va~~KaP~S~v~G~Anvfv---FPdL~aGNigYK~vQR-----------------------------------~ 285 (322)
T TIGR00651 244 AAVVEKVAEKKAPNSPVAGKANVFV---FPDLDAGNIGYKIVQR-----------------------------------L 285 (322)
T ss_pred HHHHHHHHHHHCCCCCCCCCEEEEE---CCCCCCCHHHHHHHHH-----------------------------------H
T ss_conf 4323888964078986556355887---1687740578888876-----------------------------------2
Q ss_pred CCHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHH
Q ss_conf 69687087467421614898388998689999999
Q gi|254780498|r 291 FDPRNFNGGVLLGVDGLVVKGHGSSDAKSIFNVLG 325 (364)
Q Consensus 291 ~d~~~~gGa~llGl~g~vik~HG~s~~~a~~~ai~ 325 (364)
-|++.| |.+|+|+++||===-....+.-|.|++-
T Consensus 286 ~~~~Ai-GPiLQGl~kPvnDLSRGcsV~DI~~~~~ 319 (322)
T TIGR00651 286 ADAEAI-GPILQGLSKPVNDLSRGCSVEDIVNAIA 319 (322)
T ss_pred CCCEEE-CCHHHHHCCCCCHHCCCCCHHHHHHHHH
T ss_conf 377234-4067521476541103577999999898
No 15
>PRK11890 phosphate acetyltransferase; Provisional
Probab=99.92 E-value=2.3e-22 Score=160.97 Aligned_cols=268 Identities=14% Similarity=0.102 Sum_probs=189.8
Q ss_pred CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHH
Q ss_conf 38982399997468777817779999999985799179997898999999862697515579977852017783067999
Q gi|254780498|r 8 QGGNVDTISLDLMGGDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVSIAMDERPADAL 87 (364)
Q Consensus 8 ~~~~m~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~vI~mde~P~~Al 87 (364)
+..+..||+|= -+.| +.+++++..+.++. -.+.+|+|++++|+...++.+++.+.++|+|++..
T Consensus 18 ~~~~pkrvava-~aed---~~vL~Aa~~a~~eG-ia~PILvG~~~~I~~~a~~~gldl~~~eIid~~~~----------- 81 (312)
T PRK11890 18 RTLPPLPTAVV-HPCD---ESSLRGAVEAAQLG-LITPILVGPRARIRAVAEECGLDLSDYQIVDAPHS----------- 81 (312)
T ss_pred HHCCCCEEEEE-CCCC---HHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHCCCCCCCCEEECCCCC-----------
T ss_conf 54899629998-4799---79999999999869-83799989999999999985999788868789982-----------
Q ss_pred HHCCCCHHHHHHHHHHHCCCCEEEEEE-CCHHHHHHHHHHHCCCCCCCCCCCHHH--CCCCCCCCEEEEECCCCCCCCHH
Q ss_conf 713764279999999854995399970-642678888875322556763220011--05588984599861327778989
Q gi|254780498|r 88 RRGRNVSSMWRAIEAVKKNQAASVVTA-GNTGALIAMARLCLSRISGVDRPSLAA--FWPTVKGKCIILDVGATIGSTVS 164 (364)
Q Consensus 88 R~kK~~SSm~~a~~lvk~g~aDa~VSa-GnTGA~la~a~~~lg~i~Gv~RPala~--~~Pt~~g~~vllD~GAN~d~~~~ 164 (364)
+.+-..+.+++++|++|++++. .+|..+|.........++...|-.-+. .+|+.+...++.|++.|++|+++
T Consensus 82 -----~~~a~~av~lv~~g~Ad~lmkG~~~t~~~l~~vl~~~~glr~~~~vS~v~~m~~~~~~k~l~~tD~~vni~P~~e 156 (312)
T PRK11890 82 -----HAAAAKAVELVRAGEAEALMKGSLHTDELMSAVVARDTGLRTERRISHVFVMDVPTYPKPLIITDAAVNIAPTLE 156 (312)
T ss_pred -----HHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCEEEEECCEEEECCCHH
T ss_conf -----899999999833788868986787625676665410367678864789999973688834999426577587999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH---CCCCCCCEECCCCH--------------
Q ss_conf 9999999999999985689996589984045555565799999999740---24571320023455--------------
Q gi|254780498|r 165 HMVQLSILGSFFARSVAGINCPSIGLLNVGTEEIKGNDVLQESARLLRG---ECCGAFKYKGFIEA-------------- 227 (364)
Q Consensus 165 ~L~qfA~mGs~yak~~~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~---~~~~~~nF~GniEg-------------- 227 (364)
+|++++.+....++. ||++.|||+||+--+.-+.....+.++-.+.+. ....++.+-|..-.
T Consensus 157 qla~Ia~~aa~~a~~-~Gi~~PkVA~LS~se~~s~~~pst~da~~l~k~~~r~~~~~~~vDGelq~D~Al~~~~a~~K~~ 235 (312)
T PRK11890 157 DKADIVQNAIDLAHA-LGEDEPRVAILSAVETVNPKIPSTLDAAALCKMADRGQITGAILDGPLAFDNAISPEAARIKGI 235 (312)
T ss_pred HHHHHHHHHHHHHHH-HCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHCHHHHHHHCC
T ss_conf 999999999999998-3899862899960036788761079999999987651488874257318888738999997344
Q ss_pred HHCCCCCCCEEEECCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECC
Q ss_conf 4532456838997551-278899998888999999999863222088999999899999999726968708746742161
Q gi|254780498|r 228 NDIAKGFVDVIVTEGF-SGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFDPRNFNGGVLLGVDG 306 (364)
Q Consensus 228 ~~i~~g~~DVvV~DGF-tGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~~~gGa~llGl~g 306 (364)
..-..|.+||+|+=-. +|||..|...- ++ .+ ...| +++|++.
T Consensus 236 ~s~vaG~AnvLIfPnLeagNI~yK~l~~--------------------l~---------------ga-~a~G-il~G~~~ 278 (312)
T PRK11890 236 VSPVAGDADILLVPDLEAGNMLAKQLTF--------------------LA---------------GA-DAAG-IVLGARV 278 (312)
T ss_pred CCCCCCCCCEEEECCHHHHHHHHHHHHH--------------------HC---------------CC-EEEE-EEECCCC
T ss_conf 7866887988991882787899999998--------------------45---------------98-3997-6650688
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 4898388998689999999999999607
Q gi|254780498|r 307 LVVKGHGSSDAKSIFNVLGIAHNMSQNG 334 (364)
Q Consensus 307 ~vik~HG~s~~~a~~~ai~~a~~~~~~~ 334 (364)
||+....+++...+.|.+-.|.-.+|..
T Consensus 279 PV~~~SR~~s~~~~vn~~Ala~v~Aq~~ 306 (312)
T PRK11890 279 PIILTSRADSVRTRLASCAVAALVANAR 306 (312)
T ss_pred CEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 8787899888999999999999999874
No 16
>PRK05805 phosphate butyryltransferase; Validated
Probab=99.91 E-value=1.4e-21 Score=155.96 Aligned_cols=262 Identities=15% Similarity=0.154 Sum_probs=182.7
Q ss_pred CCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 98239999746877781777999999998579917999789899999986269751557997785201778306799971
Q gi|254780498|r 10 GNVDTISLDLMGGDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVSIAMDERPADALRR 89 (364)
Q Consensus 10 ~~m~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~vI~mde~P~~AlR~ 89 (364)
.+..||++ +=|.| ..++++|..+.++. -.+.+|+|+++.|+..+++.+++.+.++|+|+.+. +
T Consensus 15 ~~pkrIv~-~eg~d---~rvl~AA~~~~~~g-ia~pILiG~~~~I~~~~~~~gl~l~~~eiid~~~~------------~ 77 (301)
T PRK05805 15 QGPKTISV-AVAQD---EPVLEAVKEAKELG-IANAILVGDEEKIKEIAKEIGMDLEDFEIIDEKDN------------K 77 (301)
T ss_pred CCCCEEEE-ECCCC---HHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHCCCCCCCCEEECCCCH------------H
T ss_conf 79896999-08999---79999999999879-97999985999999999987999666777356462------------9
Q ss_pred CCCCHHHHHHHHHHHCCCCEEEEEEC--CHHHHHHHHH-HHCCCCCCCCCCC-H-HHCCCCCCCCEEEEECCCCCCCCHH
Q ss_conf 37642799999998549953999706--4267888887-5322556763220-0-1105588984599861327778989
Q gi|254780498|r 90 GRNVSSMWRAIEAVKKNQAASVVTAG--NTGALIAMAR-LCLSRISGVDRPS-L-AAFWPTVKGKCIILDVGATIGSTVS 164 (364)
Q Consensus 90 kK~~SSm~~a~~lvk~g~aDa~VSaG--nTGA~la~a~-~~lg~i~Gv~RPa-l-a~~~Pt~~g~~vllD~GAN~d~~~~ 164 (364)
-.-..|.+||+.|++|++++ | +|..++...+ ...|.-+| .+-. + ...+|+.++..++-||+.|++|+++
T Consensus 78 ----~~~~~a~~lv~~G~aD~lv~-G~~~t~~~lr~~l~~~~g~~~g-~~~s~~~~~~~~~~~~~l~~aD~~vn~~P~~e 151 (301)
T PRK05805 78 ----KAALKAVELVSSGKADMVMK-GLVDTATFLRAVLNKEIGLRTG-KTMSHVAVFEVPKYDRLLFLTDAAFNIYPDLK 151 (301)
T ss_pred ----HHHHHHHHHHHCCCHHHHHC-CCCCCHHHHHHHHHHHCCCCCC-CCEEEEEEEEECCCCCEEEEECCCCCCCCCHH
T ss_conf ----99999999986787467863-8755438999985101477788-71789999996289816999456200093999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEEEC---CCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHH-------------
Q ss_conf 99999999999999856899965899840---45555565799999999740245713200234554-------------
Q gi|254780498|r 165 HMVQLSILGSFFARSVAGINCPSIGLLNV---GTEEIKGNDVLQESARLLRGECCGAFKYKGFIEAN------------- 228 (364)
Q Consensus 165 ~L~qfA~mGs~yak~~~~~~~PrVgLLNi---G~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~------------- 228 (364)
+|+++|++.+..++. ||++.|||+||+- |+....-+.-..+.-+.++....+++.+-|..-.+
T Consensus 152 ~la~Ia~~aa~~a~~-lgie~PrVAlLS~s~~~s~~~~s~~da~~~~~~~~~~~~~~~~vDGelq~D~Al~~e~~~~k~~ 230 (301)
T PRK05805 152 EKIDIINNAVTVAHA-IGIEVPKVAPICAVEVVNPKMPATLDAALLSKMSDRGQIKGCIVDGPFALDNAISEEAAKHKGI 230 (301)
T ss_pred HHHHHHHHHHHHHHH-HCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHCHHHHHHHCC
T ss_conf 999999999999998-2899985999930047788873079999999998741388874567624777738999985189
Q ss_pred -HCCCCCCCEEEECCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECC
Q ss_conf -532456838997551-278899998888999999999863222088999999899999999726968708746742161
Q gi|254780498|r 229 -DIAKGFVDVIVTEGF-SGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFDPRNFNGGVLLGVDG 306 (364)
Q Consensus 229 -~i~~g~~DVvV~DGF-tGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~~~gGa~llGl~g 306 (364)
--+.|.+||+|.=.. +|||..|..+-++ +. ..+| +|.|++.
T Consensus 231 ~s~vaG~ANvLIfPnL~agNI~yKl~q~~~-----------------------------------ga-~~~G-il~G~~~ 273 (301)
T PRK05805 231 DGPVAGKADILLVPNIEAGNVMYKTLTYFA-----------------------------------DC-KNGG-LLVGTSA 273 (301)
T ss_pred CCCCCCCCCEEECCCHHHHHHHHHHHHHHC-----------------------------------CC-EEEE-EEECCCC
T ss_conf 997688788898688578899999999966-----------------------------------98-2885-6532798
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 48983889986899999999999996
Q gi|254780498|r 307 LVVKGHGSSDAKSIFNVLGIAHNMSQ 332 (364)
Q Consensus 307 ~vik~HG~s~~~a~~~ai~~a~~~~~ 332 (364)
||...-.++++..+.|.+-.|.-.++
T Consensus 274 Pv~~lSR~~s~~di~n~~aiaal~A~ 299 (301)
T PRK05805 274 PVVLTSRADSHETKLNSIALAALVAA 299 (301)
T ss_pred CEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 88769998889999999999999973
No 17
>PRK07742 phosphate butyryltransferase; Validated
Probab=99.90 E-value=2.2e-21 Score=154.72 Aligned_cols=260 Identities=20% Similarity=0.263 Sum_probs=180.0
Q ss_pred CCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCC-EEEECCCCCCCCCCHHHHHHH
Q ss_conf 9823999974687778177799999999857991799978989999998626975155-799778520177830679997
Q gi|254780498|r 10 GNVDTISLDLMGGDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKER-SCFHHCEVSIAMDERPADALR 88 (364)
Q Consensus 10 ~~m~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~r-i~Ii~a~~vI~mde~P~~AlR 88 (364)
....+|++ +=|-| ..+++++..++++. -.+.+|+|++++|+..+++..++... ++|+|++.. .
T Consensus 13 ~~~k~I~~-aeged---~rvL~Aa~~~~~eg-ia~PILvG~~~~I~~~~~~~~l~~~~~~~i~~~~~~-------~---- 76 (299)
T PRK07742 13 QPKKTVAV-AVAED---EEVIEAVAKAIELQ-LARFRLYGNQEKIMGMLQEHSLQTSEHIEIIHAQSS-------A---- 76 (299)
T ss_pred CCCCEEEE-CCCCC---HHHHHHHHHHHHCC-CEEEEEEECHHHHHHHHHHCCCCCCCCEEECCCCCH-------H----
T ss_conf 89986998-28999---79999999999869-968999819999999999869997788277189997-------9----
Q ss_pred HCCCCHHHHHHHHHHHCCCCEEEEEECC--HHHHHHHHHHHCCCCCCCCCCCH-----HHCCCCCCCCEEEEECCCCCCC
Q ss_conf 1376427999999985499539997064--26788888753225567632200-----1105588984599861327778
Q gi|254780498|r 89 RGRNVSSMWRAIEAVKKNQAASVVTAGN--TGALIAMARLCLSRISGVDRPSL-----AAFWPTVKGKCIILDVGATIGS 161 (364)
Q Consensus 89 ~kK~~SSm~~a~~lvk~g~aDa~VSaGn--TGA~la~a~~~lg~i~Gv~RPal-----a~~~Pt~~g~~vllD~GAN~d~ 161 (364)
.....|.++|+.|+||++++ |+ |..+|.. ++++..|+..... +..+|..++..++.||+.|++|
T Consensus 77 -----~~~~~a~~~v~~g~aD~lv~-G~~~t~~~l~~---~l~~~~gl~~~~~~s~v~~~~~p~~~~~l~~~D~aVni~P 147 (299)
T PRK07742 77 -----EAAELAVKAVRNGEADVLMK-GNVPTANILKA---VLNKEWGLRKGSVLSHVAAFEVPNYDRLIFVTDAAMNIAP 147 (299)
T ss_pred -----HHHHHHHHHHHCCCCCEEEC-CCCCCCCCHHH---HHCCCCCCCCCCEEEEEEEEEECCCCCEEEEECCEEECCC
T ss_conf -----99999999975797859924-77675211063---4351358778885899999984178835998305575288
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHH---HHHCCCCCCCEECCCCH-----------
Q ss_conf 9899999999999999985689996589984045555565799999999---74024571320023455-----------
Q gi|254780498|r 162 TVSHMVQLSILGSFFARSVAGINCPSIGLLNVGTEEIKGNDVLQESARL---LRGECCGAFKYKGFIEA----------- 227 (364)
Q Consensus 162 ~~~~L~qfA~mGs~yak~~~~~~~PrVgLLNiG~E~~KG~~~~kea~~L---L~~~~~~~~nF~GniEg----------- 227 (364)
++++|+++|+..+..+|. ||++.|||++|+--+--+.......++..+ .+....+++.+-|..-.
T Consensus 148 ~~eqla~Ia~~aa~~a~~-~gie~PkVAmLS~~~~~~~~~~~~~~a~~~~~~~~r~~~~d~~vDGelq~D~Al~~~~~~~ 226 (299)
T PRK07742 148 DLTQKAAIIQNAVEVARA-IGIDLPKVAPLAAVEVVNPAMQATIDAAALTQMNRRGQIKNCVVDGPLALDNAVSQIAAEH 226 (299)
T ss_pred CHHHHHHHHHHHHHHHHH-HCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 999999999999999998-4799870203532135798873179999999998774366761467427777636999975
Q ss_pred ---HHCCCCCCCEEEECCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEE
Q ss_conf ---4532456838997551-278899998888999999999863222088999999899999999726968708746742
Q gi|254780498|r 228 ---NDIAKGFVDVIVTEGF-SGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFDPRNFNGGVLLG 303 (364)
Q Consensus 228 ---~~i~~g~~DVvV~DGF-tGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~~~gGa~llG 303 (364)
..-+.|.+||+|.=-. +|||.-|..+- +- +. .. |.+|+|
T Consensus 227 k~~~s~v~G~ANvLIfPnL~agNI~yK~l~~--------------------------------~~---ga-~i-GpiL~G 269 (299)
T PRK07742 227 KGIVSDVAGKADILLVPTIEAGNVLYKSLVY--------------------------------FA---DA-KV-GAMIAG 269 (299)
T ss_pred HCCCCCCCCCCCEEEECCHHHHHHHHHHHHH--------------------------------HC---CC-CE-ECEEEC
T ss_conf 2899977887878990782787899999998--------------------------------46---99-54-045752
Q ss_pred ECCEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 16148983889986899999999999996
Q gi|254780498|r 304 VDGLVVKGHGSSDAKSIFNVLGIAHNMSQ 332 (364)
Q Consensus 304 l~g~vik~HG~s~~~a~~~ai~~a~~~~~ 332 (364)
++.||+....++++..+.|++-.|.-..+
T Consensus 270 ~~~Pv~~lSR~~s~~~ivn~~Alav~~Aq 298 (299)
T PRK07742 270 AKAPIVLTSRADSAETKLYSLALAICTAS 298 (299)
T ss_pred CCCCEEECCCCCCHHHHHHHHHHHHHHHC
T ss_conf 78886868999888999999999999856
No 18
>PRK08190 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated
Probab=99.52 E-value=6.6e-11 Score=88.68 Aligned_cols=247 Identities=18% Similarity=0.182 Sum_probs=176.8
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCC
Q ss_conf 77799999999857991799978989999998626975155799778520177830679997137642799999998549
Q gi|254780498|r 27 RDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVSIAMDERPADALRRGRNVSSMWRAIEAVKKN 106 (364)
Q Consensus 27 ~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~vI~mde~P~~AlR~kK~~SSm~~a~~lvk~g 106 (364)
...+.|+..+.++. -++-+|+||+++|+...++.+++.+.++|+|++.. ...-..|.+++++|
T Consensus 187 ~~~l~~a~~a~~~g-li~PiLVG~~~kI~~~A~~~~~dl~~~~ivd~~~~----------------~~AA~~Av~lv~~G 249 (465)
T PRK08190 187 ADALRGAIEAAEAG-LIVPVLVGPEAKIRAAAEEAGVDLSGVRIVAVEHS----------------HAAAARAVALARAG 249 (465)
T ss_pred HHHHHHHHHHHHCC-CCEEEEECCHHHHHHHHHHCCCCCCCCEEECCCCC----------------HHHHHHHHHHHHCC
T ss_conf 77899999998779-91589979999999999985998226888707994----------------89999999998679
Q ss_pred CCEEEEEEC--CHHHHHHHHHHHCCCCCCCC---CCCH--HHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 953999706--42678888875322556763---2200--1105588984599861327778989999999999999998
Q gi|254780498|r 107 QAASVVTAG--NTGALIAMARLCLSRISGVD---RPSL--AAFWPTVKGKCIILDVGATIGSTVSHMVQLSILGSFFARS 179 (364)
Q Consensus 107 ~aDa~VSaG--nTGA~la~a~~~lg~i~Gv~---RPal--a~~~Pt~~g~~vllD~GAN~d~~~~~L~qfA~mGs~yak~ 179 (364)
++|+..- | +|..+|..-. .+-.|+. |-.- ..-+|+...+.++-|++.|+.|+=++-.|+-.-...+++.
T Consensus 250 ~a~~lMK-G~l~T~~ll~avl---~ke~GLrt~r~lSHv~~~~vP~y~k~l~iTDaaini~P~l~~K~~Ii~Nai~~a~~ 325 (465)
T PRK08190 250 EVEALMK-GSLHTDELLSAVV---ARDSGLRTERRISHVYAMDVPTYPRPLLITDAAINIAPTLEQKRDIVQNAIDLAHA 325 (465)
T ss_pred CCCEEEC-CCCCHHHHHHHHH---CCCCCCCCCCEEEEEEEEECCCCCCEEEECCCEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 6658962-8866688889874---24369878986899999944899834997254033488989999999999999998
Q ss_pred HCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEEC-CCCHH------------------HCCCCCCCEEEE
Q ss_conf 56899965899840455555657999999997402457132002-34554------------------532456838997
Q gi|254780498|r 180 VAGINCPSIGLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKG-FIEAN------------------DIAKGFVDVIVT 240 (364)
Q Consensus 180 ~~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~G-niEg~------------------~i~~g~~DVvV~ 240 (364)
+|+++|||++|+==+.-+---..+-+|..|-+-...++| .| -|+|- .-..|.+|+++.
T Consensus 326 -lG~~~PKVAiLsAvE~vnp~mpsTlDAa~L~kma~rGqi--~g~ivdGPLa~DnAis~eAA~~Kgi~s~VAG~ADiLlv 402 (465)
T PRK08190 326 -LGVEEPKVAILSAVETVNPKIPSTLDAAALCKMADRGQI--TGGIVDGPLAFDNAISAEAAKTKGIVSPVAGQADILVV 402 (465)
T ss_pred -HCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCC--CCCEEECCCHHHHHCCHHHHHHCCCCCCCCCCCCEEEC
T ss_conf -199998299996001448889645889999999974896--88488778427753799899646999987887888980
Q ss_pred CC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCEEEEECCCCCHHH
Q ss_conf 55-12788999988889999999998632220889999998999999997269687087467421614898388998689
Q gi|254780498|r 241 EG-FSGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFDPRNFNGGVLLGVDGLVVKGHGSSDAKS 319 (364)
Q Consensus 241 DG-FtGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~~~gGa~llGl~g~vik~HG~s~~~a 319 (364)
-- =+||++-|+..=++ ....+++++|-+-|||-.-.+-+..+
T Consensus 403 PdieaGN~l~K~l~~~a-------------------------------------~a~~AGiv~GakvPIvLtSRaDs~~~ 445 (465)
T PRK08190 403 PDLEAGNMLAKQLTYLA-------------------------------------GADAAGIVLGARVPIILTSRADSLRA 445 (465)
T ss_pred CCHHHHHHHHHHHHHHC-------------------------------------CCCEEEEEECCCCCEEECCCCCCHHH
T ss_conf 87477639999999857-------------------------------------98778889836787897278997888
Q ss_pred HHHHHHHHHHHHHCC
Q ss_conf 999999999999607
Q gi|254780498|r 320 IFNVLGIAHNMSQNG 334 (364)
Q Consensus 320 ~~~ai~~a~~~~~~~ 334 (364)
=.+.+-+|....+..
T Consensus 446 kl~S~AlA~l~a~~~ 460 (465)
T PRK08190 446 RLASCALALLVAHAR 460 (465)
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999987
No 19
>TIGR03270 methan_mark_4 putative methanogen marker protein 4. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely linked to it. Some members have been suggested to be a methyltransferase, based on the proximity of its gene to genes of the multi-subunit complex, N5-methyl-tetrahydromethanopterin--coenzyme M methyltransferase. That context is not conserved, however. The family shows similarity to various phosphate acyltranferases.
Probab=99.36 E-value=4.5e-11 Score=89.72 Aligned_cols=179 Identities=25% Similarity=0.355 Sum_probs=125.2
Q ss_pred HHHHHHHHCCCCEEEEEECC--HHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCC-CEEEEECCCCCCCCHHHHHHHHHHH
Q ss_conf 99999985499539997064--26788888753225567632200110558898-4599861327778989999999999
Q gi|254780498|r 97 WRAIEAVKKNQAASVVTAGN--TGALIAMARLCLSRISGVDRPSLAAFWPTVKG-KCIILDVGATIGSTVSHMVQLSILG 173 (364)
Q Consensus 97 ~~a~~lvk~g~aDa~VSaGn--TGA~la~a~~~lg~i~Gv~RPala~~~Pt~~g-~~vllD~GAN~d~~~~~L~qfA~mG 173 (364)
..-++++++|++|+.|- |+ |..+|..- .+.+..+.|-++-. +.+| +++|-|||.|..++-++.++++.-+
T Consensus 8 ~~li~~l~~g~~d~~vR-Gsl~as~~l~~L---k~~~g~~~r~slL~---~~~g~~f~lapvgIde~~~~~~K~~Ii~~a 80 (202)
T TIGR03270 8 EELIDDLVNGRLDAAVR-GSLSSSNTIREL---KKALGKIYRASILE---TADGRIFLLAPVGIDEGWTISDKVKIIELA 80 (202)
T ss_pred HHHHHHHHCCCCCEEEE-ECCCHHHHHHHH---HHHCCCEEEEEEEE---CCCCCEEEECCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999986686566885-044288899999---97327357435332---478978996465225786889999999999
Q ss_pred HHHHHHHCCCCCCEEEEEECCCCCCCC-----CHHHHHHHHHHHHCCCCCCCEECCCC--HHH-----CCCCCCCEEE-E
Q ss_conf 999998568999658998404555556-----57999999997402457132002345--545-----3245683899-7
Q gi|254780498|r 174 SFFARSVAGINCPSIGLLNVGTEEIKG-----NDVLQESARLLRGECCGAFKYKGFIE--AND-----IAKGFVDVIV-T 240 (364)
Q Consensus 174 s~yak~~~~~~~PrVgLLNiG~E~~KG-----~~~~kea~~LL~~~~~~~~nF~GniE--g~~-----i~~g~~DVvV-~ 240 (364)
+-++|. +|++ ||||+|+-|.=..-| ...+.++-.+++. +.+.++ -+. -..|.+||++ -
T Consensus 81 ~~~~r~-lGie-PKVAvLS~grl~d~gr~~~Id~si~d~e~~~~~-------~~~~~~a~h~gIliE~av~~~adiiiaP 151 (202)
T TIGR03270 81 SEFLRR-LGRE-PKVAVLSGGRLGDVGRSPEVDRSIADGELIARL-------LKDGMEIEHYGILIEEALKDGSNVIIAP 151 (202)
T ss_pred HHHHHH-CCCC-CCEEEEECCCHHCCCCCCCCCCHHHHHHHHHHH-------HCCCCHHEECCEEEEHHHCCCCCEEEEC
T ss_conf 999998-0999-855988644021057675422158758999986-------3055000243253105445878989815
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCEEEEECCCCCHHHH
Q ss_conf 55127889999888899999999986322208899999989999999972696870874674216148983889986899
Q gi|254780498|r 241 EGFSGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFDPRNFNGGVLLGVDGLVVKGHGSSDAKSI 320 (364)
Q Consensus 241 DGFtGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~~~gGa~llGl~g~vik~HG~s~~~a~ 320 (364)
||-+||+.-|+.-=+ + ..+.| ||+++|.+.++|-+-.+.+...+
T Consensus 152 Dg~sGNllfr~l~~l--------------------~---------------~~~~~-Ga~vlg~~~~~VdTSRa~s~e~y 195 (202)
T TIGR03270 152 DGISGNLIFRSLALV--------------------G---------------GGRSY-GAPVLNDEGVFVDTSRSQTAEGY 195 (202)
T ss_pred CCCHHHHHHHHHHHH--------------------C---------------CCCCC-CCEEECCCCCEEECCCCCCHHHH
T ss_conf 721202999999997--------------------4---------------87656-73012687617976767655788
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254780498|r 321 FNVLGIA 327 (364)
Q Consensus 321 ~~ai~~a 327 (364)
+|||.+|
T Consensus 196 ~~al~lA 202 (202)
T TIGR03270 196 YNALKLA 202 (202)
T ss_pred HHHHHCC
T ss_conf 7777529
No 20
>PRK01909 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Validated
Probab=99.27 E-value=6.3e-09 Score=76.19 Aligned_cols=280 Identities=17% Similarity=0.149 Sum_probs=167.9
Q ss_pred CCCCEEEEEEECCC--CCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCC------CEEEECCCCCC--
Q ss_conf 38982399997468--777817779999999985799179997898999999862697515------57997785201--
Q gi|254780498|r 8 QGGNVDTISLDLMG--GDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKE------RSCFHHCEVSI-- 77 (364)
Q Consensus 8 ~~~~m~kIAVDaMG--GD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~------ri~Ii~a~~vI-- 77 (364)
++.+.+||+| .|| .--||+.+++.........++..|+++|+.+.++...+....... .+.+.+-+...
T Consensus 1 m~~~~lrIaI-T~GDPaGIGPEIilKal~~~~~~~~~~~~vviGd~~~l~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~ 79 (329)
T PRK01909 1 MRPQPLQIAI-TTGEPAGVGPELTVQALADAATRWPDARFTVLGDAALLAARAAAVGVDWARLAAGGHVSVAHRALAAPA 79 (329)
T ss_pred CCCCCCEEEE-ECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCCCHHHHCCCCCCCEECCCCCCCC
T ss_conf 9999976999-758885017999999998657546898889997999999999983998355046897515216777878
Q ss_pred CCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEC-CHHHHHHHH------HHHCCCCCCCCCCCHHHCCCCCCCC-
Q ss_conf 77830679997137642799999998549953999706-426788888------7532255676322001105588984-
Q gi|254780498|r 78 AMDERPADALRRGRNVSSMWRAIEAVKKNQAASVVTAG-NTGALIAMA------RLCLSRISGVDRPSLAAFWPTVKGK- 149 (364)
Q Consensus 78 ~mde~P~~AlR~kK~~SSm~~a~~lvk~g~aDa~VSaG-nTGA~la~a------~~~lg~i~Gv~RPala~~~Pt~~g~- 149 (364)
.....-...=+-. -.|+..|++++++|++||+|.+= |-.++-.++ +-+|...-|..++..+-.-.....-
T Consensus 80 ~~G~~~~~~g~~~--~~~l~~Av~~~~~g~~dalVTaPInK~~i~~aG~~f~GHTE~La~~~~~~~~~Mml~~~~~~~Lr 157 (329)
T PRK01909 80 EAGKLDAANGRYV--LDLLDAAIDGALAGRYDAIVTAPLQKSTINDAGVPFTGHTEYLAERTHTPRVVMMLAGTGERPLR 157 (329)
T ss_pred CCCCCCHHHHHHH--HHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCEE
T ss_conf 7898088999999--99999999999759888999771289999867999898789999983899759999866998379
Q ss_pred EEEE-------ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEE--E--CCCCCCCCCHH---HHHHHHHHHHCC
Q ss_conf 5998-------61327778989999999999999998568999658998--4--04555556579---999999974024
Q gi|254780498|r 150 CIIL-------DVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLL--N--VGTEEIKGNDV---LQESARLLRGEC 215 (364)
Q Consensus 150 ~vll-------D~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLL--N--iG~E~~KG~~~---~kea~~LL~~~~ 215 (364)
++++ |+-.++ +++.+.+-..+-....+.-||+++||++.+ | -|+.-.=|+|. +.-|-+-+++.
T Consensus 158 V~l~T~HipLk~V~~~I--t~~~I~~~i~~~~~~l~~~fgi~~PrIaV~GLNPHAGE~G~~G~EE~~iI~PAI~~~~~~- 234 (329)
T PRK01909 158 VALATTHLPLRDVSAAL--TIDGLVETLAIIDRDLRRDFGLAAPRILVTGLNPHAGENGYLGREEIDVIEPALARARAA- 234 (329)
T ss_pred EEEECCCCCHHHHHHHH--CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHC-
T ss_conf 99845661199999842--347999999999999998448889859999508987655666337788899999999847-
Q ss_pred CCCCCEECCCCHHHCCC----CCCCEEEECC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 57132002345545324----5683899755-127889999888899999999986322208899999989999999972
Q gi|254780498|r 216 CGAFKYKGFIEANDIAK----GFVDVIVTEG-FSGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEG 290 (364)
Q Consensus 216 ~~~~nF~GniEg~~i~~----g~~DVvV~DG-FtGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~ 290 (364)
.++-.|..-++-+|. ++.|+|||== =.|=|.+|+..
T Consensus 235 --gi~v~GP~paDt~F~~~~~~~~D~vlaMYHDQglip~K~l~------------------------------------- 275 (329)
T PRK01909 235 --GIDARGPYPADTLFQPRHLEDADCVLAMFHDQGLPVLKYAT------------------------------------- 275 (329)
T ss_pred --CCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHCC-------------------------------------
T ss_conf --99620067937898997577989999855012358787535-------------------------------------
Q ss_pred CCHHHCCCEEEEEECCEE----------EEECCCCCHHHHHHHHHHHHHHHHCCH
Q ss_conf 696870874674216148----------983889986899999999999996070
Q gi|254780498|r 291 FDPRNFNGGVLLGVDGLV----------VKGHGSSDAKSIFNVLGIAHNMSQNGF 335 (364)
Q Consensus 291 ~d~~~~gGa~llGl~g~v----------ik~HG~s~~~a~~~ai~~a~~~~~~~~ 335 (364)
.+ .|=-+-|||.=+- |-+-|.++..++.+||++|.++++++-
T Consensus 276 --f~-~~vn~TlGLp~iRtS~dHGTA~diAGkg~A~~~s~~~Ai~~A~~~a~~r~ 327 (329)
T PRK01909 276 --FG-EGINVTLGLPIIRTSVDHGTALDLAGTGRADPGSMIAAIDTAVTMARHRR 327 (329)
T ss_pred --CC-CCEEEECCCCCEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf --78-73799348991067899871566627898996999999999999998533
No 21
>TIGR02706 P_butyryltrans phosphate butyryltransferase; InterPro: IPR014079 Members of this family are phosphate butyryltransferase enzymes, also called phosphotransbutyrylase. In general, this enzyme is found in butyrate-producing anaerobic bacteria, encoded next to the gene for butyrate kinase. Together, these two enzymes represent what may be the less common of two pathways for butyrate production from butyryl-CoA. The alternative is transfer of the CoA group to acetate by butyryl-CoA:acetate CoA transferase. This entry does not include the homologue from Thermotoga maritima, whose activity on butyryl-CoA is only 30 0f its activity with acetyl-CoA..
Probab=99.16 E-value=1.8e-08 Score=73.32 Aligned_cols=248 Identities=17% Similarity=0.237 Sum_probs=174.9
Q ss_pred CCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 98239999746877781777999999998579917999789899999986269751557997785201778306799971
Q gi|254780498|r 10 GNVDTISLDLMGGDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVSIAMDERPADALRR 89 (364)
Q Consensus 10 ~~m~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~vI~mde~P~~AlR~ 89 (364)
-.+.|||| |.=-| ++|+++...|. ++.-.+++|+||+++|+.+.++.+...+.++|+|.++.
T Consensus 11 ~~~K~vAV-A~A~D---E~VlEAvk~A~-E~~ia~aiLvGD~~~I~~ia~~~~~~l~d~eIv~~~~~------------- 72 (295)
T TIGR02706 11 CPKKTVAV-AVAQD---EPVLEAVKEAK-EKGIARAILVGDKEKIEEIAKKIGMNLDDYEIVNAPSV------------- 72 (295)
T ss_pred CCCCEEEE-EECCC---CHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEECCCCH-------------
T ss_conf 78972999-85089---24799999986-55906788847889999999984898230132228986-------------
Q ss_pred CCCCHHHHHHHHHHHCCCCEEEEEEC--CHHHHHHHHHHHCCCCCCCCCCCHHH---C--CCCCCCCEEEEECCCCCCCC
Q ss_conf 37642799999998549953999706--42678888875322556763220011---0--55889845998613277789
Q gi|254780498|r 90 GRNVSSMWRAIEAVKKNQAASVVTAG--NTGALIAMARLCLSRISGVDRPSLAA---F--WPTVKGKCIILDVGATIGST 162 (364)
Q Consensus 90 kK~~SSm~~a~~lvk~g~aDa~VSaG--nTGA~la~a~~~lg~i~Gv~RPala~---~--~Pt~~g~~vllD~GAN~d~~ 162 (364)
+ -+=..|.++|-+|+||.+-= | +|..++.+ +|-+--|...--.++ + .|..+.-.+|-|+.-|+-|+
T Consensus 73 -~--~AA~~AV~lVs~~~AD~lMK-G~V~Ta~~Lrs---VLnKE~GLRTGk~lSHVAVFe~P~~dRLl~lTDaAfN~yP~ 145 (295)
T TIGR02706 73 -K--KAALLAVRLVSTGKADMLMK-GLVDTATFLRS---VLNKEVGLRTGKVLSHVAVFEVPGFDRLLFLTDAAFNIYPE 145 (295)
T ss_pred -H--HHHHHHHHHHHCCCCCEEEC-CCCCHHHHHHH---HHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCC
T ss_conf -8--99999999862898646744-86555789888---85000121048712206771589855143231266502878
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCEEEEEE-CCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCC---------------
Q ss_conf 899999999999999985689996589984-0455555657999999997402457132002345---------------
Q gi|254780498|r 163 VSHMVQLSILGSFFARSVAGINCPSIGLLN-VGTEEIKGNDVLQESARLLRGECCGAFKYKGFIE--------------- 226 (364)
Q Consensus 163 ~~~L~qfA~mGs~yak~~~~~~~PrVgLLN-iG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniE--------------- 226 (364)
=++..|+=.=.-.-|+.+ ||+.|||+.|- |=+= +=.=+.+-.|..|=+ ++=-|-|+
T Consensus 146 Lk~K~~ii~NaV~VAha~-Gi~~PkVA~l~AVEvV-NP~M~aTvDAA~Lak------M~~RGQIkGCivDGPLALDnA~S 217 (295)
T TIGR02706 146 LKDKVQIINNAVKVAHAI-GIEVPKVAVLAAVEVV-NPKMPATVDAAALAK------MSDRGQIKGCIVDGPLALDNAIS 217 (295)
T ss_pred HHHHHHHHHHHHHHHHCC-CCCCCCEEEECCEEEE-CCCCHHHHHHHHHHH------HCCCCCEEEEEECCCHHHHHHHH
T ss_conf 789999976475502321-7886861153026356-688715799999840------02068456788747344457731
Q ss_pred ----------HHHCCCCCCCEEEECC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf ----------5453245683899755-12788999988889999999998632220889999998999999997269687
Q gi|254780498|r 227 ----------ANDIAKGFVDVIVTEG-FSGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFDPRN 295 (364)
Q Consensus 227 ----------g~~i~~g~~DVvV~DG-FtGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~~ 295 (364)
||+ --|++|+++-=- =+|||+-||.==+ .+.
T Consensus 218 ~eAA~HKgi~~r~-VAG~ADILL~P~IeaGN~lYK~LtY~-------------------------------------a~~ 259 (295)
T TIGR02706 218 EEAAKHKGIEGRE-VAGKADILLVPDIEAGNVLYKTLTYF-------------------------------------AKS 259 (295)
T ss_pred HHHHHCCCCCCCC-CCCCCCEEECCCCCHHHHHHHHHHHH-------------------------------------HHH
T ss_conf 8999708856773-26788542128720256699999999-------------------------------------711
Q ss_pred CCCEEEEEECCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 087467421614898388998689999999999
Q gi|254780498|r 296 FNGGVLLGVDGLVVKGHGSSDAKSIFNVLGIAH 328 (364)
Q Consensus 296 ~gGa~llGl~g~vik~HG~s~~~a~~~ai~~a~ 328 (364)
-+|++|.|-+.|||=+-.+=+...=.|.|=+|.
T Consensus 260 k~gg~l~GtkaPvvLTSRADS~E~K~~SIALAa 292 (295)
T TIGR02706 260 KNGGILVGTKAPVVLTSRADSFETKLNSIALAA 292 (295)
T ss_pred CCCEEECCCCCCEEECCCCCHHHHHHHHHHHHH
T ss_conf 114586037787363355530446899999999
No 22
>PRK05312 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Provisional
Probab=98.86 E-value=3.5e-06 Score=58.86 Aligned_cols=272 Identities=20% Similarity=0.238 Sum_probs=158.9
Q ss_pred EEEEEEECCCCC---CCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCC----------CC
Q ss_conf 239999746877---78177799999999857991799978989999998626975155799778520----------17
Q gi|254780498|r 12 VDTISLDLMGGD---LGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVS----------IA 78 (364)
Q Consensus 12 m~kIAVDaMGGD---~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~v----------I~ 78 (364)
|.+|+|-. || -||+.+++.... ........++++|+.+.++...+..+...+...|...++. +.
T Consensus 3 ~kpIaIT~--GDPaGIGPEIi~Kal~~-~~~~~~~~~vviGd~~~l~~~~~~l~~~~~~~~i~~~~~~~~~~~~~l~v~~ 79 (336)
T PRK05312 3 MRPLALTL--GDPAGIGPEIALKAWLA-RRELGLPPFFLIGDPALLAARARLLGLAVPIAEVSDPAEAAAAFADALPVLP 79 (336)
T ss_pred CCCEEEEC--CCCCHHHHHHHHHHHHH-HHHCCCCCEEEEECHHHHHHHHHHCCCCCCEEEECCHHHHHHCCCCEEEEEC
T ss_conf 99889973--78633169999999861-4452699989995999999999985999874783887787443588026850
Q ss_pred CCCHHHHHHHHCCC--------CHHHHHHHHHHHCCCCEEEEEEC-CHHHHHHHH------HHHCCCCCCCCC----CCH
Q ss_conf 78306799971376--------42799999998549953999706-426788888------753225567632----200
Q gi|254780498|r 79 MDERPADALRRGRN--------VSSMWRAIEAVKKNQAASVVTAG-NTGALIAMA------RLCLSRISGVDR----PSL 139 (364)
Q Consensus 79 mde~P~~AlR~kK~--------~SSm~~a~~lvk~g~aDa~VSaG-nTGA~la~a------~~~lg~i~Gv~R----Pal 139 (364)
... +. .+.-++. -.|+..|++++++|++||+|.+= |--++-.++ +-+|..+-|.+. -.+
T Consensus 80 ~~~-~~-~~~~G~~s~~~g~~a~~~l~~Ai~~~~~g~idaiVT~PInK~~i~~aG~~f~GHTE~LA~l~g~~~~~~~~~v 157 (336)
T PRK05312 80 LPH-AA-PVTPGKPDPANAAGVIAAIERAVALVLSGAAAAVVTNPIAKKVLYEAGFAFPGHTEFLAELAGVALGKPVQPV 157 (336)
T ss_pred CCC-CC-CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEE
T ss_conf 676-66-7789985889999999999999999974998899978758698973578889869999998554446777426
Q ss_pred HHCCCCCCCCEEEE-------ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEE--E--CCCCCCCCCHH---HH
Q ss_conf 11055889845998-------61327778989999999999999998568999658998--4--04555556579---99
Q gi|254780498|r 140 AAFWPTVKGKCIIL-------DVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLL--N--VGTEEIKGNDV---LQ 205 (364)
Q Consensus 140 a~~~Pt~~g~~vll-------D~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLL--N--iG~E~~KG~~~---~k 205 (364)
|.++ +.+=+++++ |+-..+ +++.+.+-..+-....+..+|+++||++++ | -|+.-.-|+|. +.
T Consensus 158 Mml~-~~~LrV~l~TtHIpLk~V~~~I--t~~~I~~~i~l~~~~L~~~fgi~~PrIaV~GLNPHAGE~G~~G~EE~~iI~ 234 (336)
T PRK05312 158 MMLA-GPQLRVVPVTIHIPLRDVPAAL--TTELIVATARITAADLRRRFGIAAPRLAVAGLNPHAGEGGALGREDIDIIA 234 (336)
T ss_pred EEEE-CCCCEEEEECCCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHH
T ss_conf 8861-5873688853350599997654--489999999999999998549888728999708986545667663488899
Q ss_pred HHHHHHHHCCCCCCCEECCCCHHHCCC----CCCCEEEECC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 999997402457132002345545324----5683899755-12788999988889999999998632220889999998
Q gi|254780498|r 206 ESARLLRGECCGAFKYKGFIEANDIAK----GFVDVIVTEG-FSGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLI 280 (364)
Q Consensus 206 ea~~LL~~~~~~~~nF~GniEg~~i~~----g~~DVvV~DG-FtGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~ 280 (364)
-|-+-+++. .++..|.+-++-+|. +..|+|||== =.|=|.+|+..-
T Consensus 235 Pai~~~~~~---gi~v~GP~paDt~F~~~~~~~~D~vlaMYHDQglip~K~l~f-------------------------- 285 (336)
T PRK05312 235 PAIEQLRAE---GIDARGPLPADTMFHAAARATYDAAICMYHDQALIPIKTLDF-------------------------- 285 (336)
T ss_pred HHHHHHHHC---CCEEECCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCC--------------------------
T ss_conf 999999978---994678989668754445068899998341336797874458--------------------------
Q ss_pred HHHHHHHHHHCCHHHCCCEEEEEECCEE----------EEECCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 9999999972696870874674216148----------98388998689999999999999607
Q gi|254780498|r 281 KKSLREVKEGFDPRNFNGGVLLGVDGLV----------VKGHGSSDAKSIFNVLGIAHNMSQNG 334 (364)
Q Consensus 281 ~~~l~~~~~~~d~~~~gGa~llGl~g~v----------ik~HG~s~~~a~~~ai~~a~~~~~~~ 334 (364)
..|=-+-|||.=+- |-+.|.++..++.+||+.|.++++++
T Consensus 286 --------------~~~vn~tlGLp~iRtS~dHGTA~diAgk~~A~~~s~~~Ai~~A~~~~~~r 335 (336)
T PRK05312 286 --------------DEGVNVTLGLPFIRTSPDHGTAFDIAGKGIARPDSLIAALRLAAQMAANR 335 (336)
T ss_pred --------------CCCEEEECCCCCEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf --------------87479813899106789987046661789899699999999999999715
No 23
>PRK04607 consensus
Probab=98.84 E-value=1.2e-05 Score=55.40 Aligned_cols=272 Identities=14% Similarity=0.122 Sum_probs=155.4
Q ss_pred CCCEEEEEEECCCCCC--CCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEE---------------
Q ss_conf 8982399997468777--81777999999998579917999789899999986269751557997---------------
Q gi|254780498|r 9 GGNVDTISLDLMGGDL--GARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFH--------------- 71 (364)
Q Consensus 9 ~~~m~kIAVDaMGGD~--~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii--------------- 71 (364)
+.++.|||| .||-=. ||+.+++ .+++....+++++|+.+.+.......+...+...+.
T Consensus 2 M~~~k~IaI-T~GDPaGIGpEIilk----~~~~~~~~~~viigd~~~l~~~~~~lg~~~~~~~~~~~~~~~~~~~~~l~v 76 (330)
T PRK04607 2 MNSIKRIVV-TAGEPAGIGPDLVLA----LSKEDWPHQLVVCADKQLLAERAAQLGIQVQLLDYNADLAPQAQQAGTLLV 76 (330)
T ss_pred CCCCCCEEE-ECCCCCHHHHHHHHH----HHHHCCCCCEEEEECHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEE
T ss_conf 988994899-558876217999999----851358888799989999999999849994575558665566244884588
Q ss_pred -CCCC--CCCCCC-HHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEC-CHHHHHHHH------HHHCCCCCCCCCCCHH
Q ss_conf -7852--017783-0679997137642799999998549953999706-426788888------7532255676322001
Q gi|254780498|r 72 -HCEV--SIAMDE-RPADALRRGRNVSSMWRAIEAVKKNQAASVVTAG-NTGALIAMA------RLCLSRISGVDRPSLA 140 (364)
Q Consensus 72 -~a~~--vI~mde-~P~~AlR~kK~~SSm~~a~~lvk~g~aDa~VSaG-nTGA~la~a------~~~lg~i~Gv~RPala 140 (364)
+.+. -+...+ ++..+ +.- -.|+..|++++++|++||+|.+= |--++-.++ +-+|...-+..++..+
T Consensus 77 ~~~~~~~~~~~G~~s~~~g-~~~--~~sl~~Av~~~~~g~~dalVT~PInK~~i~~ag~~f~GHTE~LA~~~~~~~~~Mm 153 (330)
T PRK04607 77 EHIELAEPVVAGQLNEANG-HYV--LKTLERAALGCMNGEFDAIVTGPVHKGVINRAGVAFSGHTEFFAEQSNTPLVVMM 153 (330)
T ss_pred ECCCCCCCCCCCCCCHHHH-HHH--HHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCCCHHHHHHHHCCCCEEEE
T ss_conf 4356678778897398999-999--9999999999972987889977314999985799999817898754146645554
Q ss_pred HCCCCCCCCEEEE-------ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEE--E--CCCCCCCCCH---HHHH
Q ss_conf 1055889845998-------61327778989999999999999998568999658998--4--0455555657---9999
Q gi|254780498|r 141 AFWPTVKGKCIIL-------DVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLL--N--VGTEEIKGND---VLQE 206 (364)
Q Consensus 141 ~~~Pt~~g~~vll-------D~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLL--N--iG~E~~KG~~---~~ke 206 (364)
-. +.+=.++++ |+-.++ +.+.+.+.-.+-....+.-+|+++||++++ | -|+.-.-|+| .+.-
T Consensus 154 l~--~~~LrV~lvTtHipLk~V~~~i--t~~~I~~~i~~~~~~l~~~fgi~~PrIaV~GLNPHAGE~G~~G~EE~~iI~P 229 (330)
T PRK04607 154 LA--TEGLRVALVTTHIPLAYVSKAV--TEERLEQIIDILHKDLVEKFAIAEPKIYVCGLNPHAGEDGCLGREEIETITP 229 (330)
T ss_pred EC--CCCEEEEEECCCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHH
T ss_conf 30--7970899961468799999998--0999999999999999986288898189995088765567776443878999
Q ss_pred HHHHHHHCCCCCCCEECCCCHHHCCC----CCCCEEEECC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 99997402457132002345545324----5683899755-127889999888899999999986322208899999989
Q gi|254780498|r 207 SARLLRGECCGAFKYKGFIEANDIAK----GFVDVIVTEG-FSGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIK 281 (364)
Q Consensus 207 a~~LL~~~~~~~~nF~GniEg~~i~~----g~~DVvV~DG-FtGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~ 281 (364)
|-+-|++. ..++..|..-++-+|. ++.|+|||== =.|=|.+|+..-
T Consensus 230 aI~~l~~~--~gi~v~GP~paDt~F~~~~~~~~D~vlamYHDQglip~K~~~f--------------------------- 280 (330)
T PRK04607 230 TLEKLRQE--KGMNLVGPLPADTIFNEKYLNDADAVLGMYHDQVLPVLKYKGF--------------------------- 280 (330)
T ss_pred HHHHHHHH--CCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCHHHHHHCCC---------------------------
T ss_conf 99998875--5967689968177765420358999998351442176664256---------------------------
Q ss_pred HHHHHHHHHCCHHHCCCEEEEEECCE----------EEEECCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 99999997269687087467421614----------898388998689999999999999607
Q gi|254780498|r 282 KSLREVKEGFDPRNFNGGVLLGVDGL----------VVKGHGSSDAKSIFNVLGIAHNMSQNG 334 (364)
Q Consensus 282 ~~l~~~~~~~d~~~~gGa~llGl~g~----------vik~HG~s~~~a~~~ai~~a~~~~~~~ 334 (364)
..|=-+-|||-=+ =|-+-|.++..++.+||++|.++++++
T Consensus 281 -------------~~~Vn~TlGLP~iRtS~dHGTa~dIag~g~A~~~S~~~Ai~~A~~~~~~r 330 (330)
T PRK04607 281 -------------GRSVNITLGLPFIRTSVDHGTALELAGTGQADTGSFRTALTHAIELVEKK 330 (330)
T ss_pred -------------CCCEEEECCCCEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf -------------76379954899247789987046661789899699999999999998549
No 24
>PRK02848 consensus
Probab=98.75 E-value=2.4e-05 Score=53.60 Aligned_cols=276 Identities=17% Similarity=0.134 Sum_probs=157.7
Q ss_pred CCCEEEEEEECCC--CCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCC----------
Q ss_conf 8982399997468--7778177799999999857991799978989999998626975155799778520----------
Q gi|254780498|r 9 GGNVDTISLDLMG--GDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVS---------- 76 (364)
Q Consensus 9 ~~~m~kIAVDaMG--GD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~v---------- 76 (364)
.....+||| .|| .--||+.+++....- +......++++|+.+.++...+..+...+ +..++..+.
T Consensus 4 ~~~KP~IaI-T~GDPaGIGpEIilKal~~~-~~~~~~~~viigd~~~l~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~ 80 (341)
T PRK02848 4 AAAKPVIAL-TLGDPAGIGPELIAKLLADP-DVREKANIVLVGDRWLWEEGMRIAGVEVD-LEPVDSLAEARFATARPAF 80 (341)
T ss_pred CCCCCEEEE-ECCCCCHHHHHHHHHHHHCH-HHCCCCCEEEEECHHHHHHHHHHCCCCCC-EEECCCHHHCCCCCCCCEE
T ss_conf 899998999-34787433899999998474-34069988999899999999998499985-3563864544513278348
Q ss_pred CCCCCHHHHHHHHCCC--------CHHHHHHHHHHHCCCCEEEEEEC-CHHHHHHHH------HHHCCCCCCCCCCCHHH
Q ss_conf 1778306799971376--------42799999998549953999706-426788888------75322556763220011
Q gi|254780498|r 77 IAMDERPADALRRGRN--------VSSMWRAIEAVKKNQAASVVTAG-NTGALIAMA------RLCLSRISGVDRPSLAA 141 (364)
Q Consensus 77 I~mde~P~~AlR~kK~--------~SSm~~a~~lvk~g~aDa~VSaG-nTGA~la~a------~~~lg~i~Gv~RPala~ 141 (364)
+..+......+.-++. -.|+..|++++++|++||+|.+= |-.++..++ +..|...-|+..+..+-
T Consensus 81 i~~~~~~~~~~~~G~~s~~~g~~~~~si~~Av~~~~~g~~~alVT~PInK~~l~~aG~~f~GHTE~la~~~~~~~~~~~~ 160 (341)
T PRK02848 81 LDLDTIDPADVVRGEATAAGGRYALETLDLALDLARAGDVDAICFAPLNKQAMKLAGLRHEDELHWFAEYLGFTGYFCEF 160 (341)
T ss_pred ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEE
T ss_conf 50666662447879858899999999999999999739978899776688999525789874799999984889750377
Q ss_pred CCCCCCC-CEEEE-------ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE----CCCCCCCCCHH---HHH
Q ss_conf 0558898-45998-------613277789899999999999999985689996589984----04555556579---999
Q gi|254780498|r 142 FWPTVKG-KCIIL-------DVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLLN----VGTEEIKGNDV---LQE 206 (364)
Q Consensus 142 ~~Pt~~g-~~vll-------D~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLLN----iG~E~~KG~~~---~ke 206 (364)
+ ...+ .++++ |+--+ -+.+.+.+....-..+.+. +++++||++.+- -|+.-.-|+|. +.-
T Consensus 161 -~-~~~~L~v~~~TtHipLk~V~~~--It~~~I~~~i~~~~~~lk~-~gi~~PrIaV~GLNPHAGE~G~~G~EE~~iI~P 235 (341)
T PRK02848 161 -N-VLDDLWTARVTSHIPLKDVAAN--LSQERILDAIELIYRSLRR-AGVARPRIAVAALNPHGGDGGSFGREEIDIIEP 235 (341)
T ss_pred -E-ECCCEEEEEECCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHH-HCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHH
T ss_conf -6-2386478985168539999998--7399999999999999998-189898579995489876567876155898999
Q ss_pred HHHHHHHCCCCCCCEECCCCHHHCCC----CCCCEEEECCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 99997402457132002345545324----56838997551-27889999888899999999986322208899999989
Q gi|254780498|r 207 SARLLRGECCGAFKYKGFIEANDIAK----GFVDVIVTEGF-SGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIK 281 (364)
Q Consensus 207 a~~LL~~~~~~~~nF~GniEg~~i~~----g~~DVvV~DGF-tGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~ 281 (364)
|-+.|++. .+|..|.+-++-+|. ++.|+|||==- .|=+.+|+..- .
T Consensus 236 AI~~l~~~---gi~v~GP~pADt~F~~~~~~~~D~vlaMYHDQglip~K~l~f---------~----------------- 286 (341)
T PRK02848 236 AVEKARAR---GIPVDGPFPADTIFLKAQRGEFDAVVTMYHDQGQIAIKLMGF---------S----------------- 286 (341)
T ss_pred HHHHHHHC---CEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCC---------C-----------------
T ss_conf 99999978---900879988188988865278999998352453065653357---------8-----------------
Q ss_pred HHHHHHHHHCCHHHCCCEEEEEECC--------E--EEEECCCCCHHHHHHHHHHHHHHHHCCH
Q ss_conf 9999999726968708746742161--------4--8983889986899999999999996070
Q gi|254780498|r 282 KSLREVKEGFDPRNFNGGVLLGVDG--------L--VVKGHGSSDAKSIFNVLGIAHNMSQNGF 335 (364)
Q Consensus 282 ~~l~~~~~~~d~~~~gGa~llGl~g--------~--vik~HG~s~~~a~~~ai~~a~~~~~~~~ 335 (364)
.+=-+-|||.= + =|-+.|.+|+..+.+||+.|.++.+++-
T Consensus 287 --------------~~vN~TlGLp~iRtSpDHGTa~diagk~~A~~~S~~~Ai~~A~~~~~~r~ 336 (341)
T PRK02848 287 --------------RGVTVQGGLPIPITTPAHGTAYDIAGKGIADVGATRQAFLIACRMGAARR 336 (341)
T ss_pred --------------CCEEEECCCCEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf --------------73798348992167899870466507898996999999999999999644
No 25
>PRK03367 consensus
Probab=98.70 E-value=1.5e-05 Score=54.96 Aligned_cols=267 Identities=14% Similarity=0.143 Sum_probs=153.9
Q ss_pred EEEEEECCCCC--CCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCC----------------EEEECCC
Q ss_conf 39999746877--78177799999999857991799978989999998626975155----------------7997785
Q gi|254780498|r 13 DTISLDLMGGD--LGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKER----------------SCFHHCE 74 (364)
Q Consensus 13 ~kIAVDaMGGD--~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~r----------------i~Ii~a~ 74 (364)
.||+| .||== -||+.+++. +++....+++++||...+....+......+. +.+++..
T Consensus 5 ~~IaI-T~GDPaGIGPEIi~kl----~~~~~~~~~iv~gd~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 79 (329)
T PRK03367 5 QRVVI-TPGEPAGIGPDLVVQL----AQREWPVELVVCADPALLTDRAAMLGLPLTLRPYSPDQPAQPQTAGTLTLLPVA 79 (329)
T ss_pred CCEEE-ECCCCCHHHHHHHHHH----HHCCCCCCEEEEECHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEEECCC
T ss_conf 97899-8788753189999999----700689888999789999999997599945887388765664658834786167
Q ss_pred CC--CCCCC-HHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEC-CHHHHHHHH------HHHCCCCCCCCCCCHHHCCC
Q ss_conf 20--17783-0679997137642799999998549953999706-426788888------75322556763220011055
Q gi|254780498|r 75 VS--IAMDE-RPADALRRGRNVSSMWRAIEAVKKNQAASVVTAG-NTGALIAMA------RLCLSRISGVDRPSLAAFWP 144 (364)
Q Consensus 75 ~v--I~mde-~P~~AlR~kK~~SSm~~a~~lvk~g~aDa~VSaG-nTGA~la~a------~~~lg~i~Gv~RPala~~~P 144 (364)
.. +.... ++. +=+-- -.|+..|++++++|++||+|.+= |-.++-.++ +-+|...-+..++.. -+.
T Consensus 80 ~~~~~~~G~~s~~-~g~~~--~~~l~~Av~~~~~g~~~alVTaPInK~~i~~aG~~f~GHTE~La~~~~~~~~~M-ml~- 154 (329)
T PRK03367 80 LRAPVTPGQLAVE-NGHYV--VETLARACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVM-MLA- 154 (329)
T ss_pred CCCCCCCCCCCHH-HHHHH--HHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHHCCCCEEE-EEE-
T ss_conf 6778888972889-99999--999999999998298789997741589998689998983999999868996576-663-
Q ss_pred CCCCCEEEE-------ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEE--E--CCCCCCCCCH---HHHHHHHH
Q ss_conf 889845998-------61327778989999999999999998568999658998--4--0455555657---99999999
Q gi|254780498|r 145 TVKGKCIIL-------DVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLL--N--VGTEEIKGND---VLQESARL 210 (364)
Q Consensus 145 t~~g~~vll-------D~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLL--N--iG~E~~KG~~---~~kea~~L 210 (364)
+.+=+++++ |+-. ..+++.+.+.-..-....+.-+|+++||+|.+ | -|+.-.-|+| .+.-|-+-
T Consensus 155 ~~~LrV~lvTtHipLk~V~~--~It~~~I~~~i~~~~~~l~~~~gi~~PrIaV~GLNPHAGE~G~~G~EE~~iI~PaI~~ 232 (329)
T PRK03367 155 TEELRVALATTHLPLRAIAD--AITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLDE 232 (329)
T ss_pred CCCCEEEEECCCCCHHHHHH--HCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 58748998503632899886--3899999999999999999835988985999950898765677773558889999999
Q ss_pred HHHCCCCCCCEECCCCHHHCCC----CCCCEEEECC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 7402457132002345545324----5683899755-1278899998888999999999863222088999999899999
Q gi|254780498|r 211 LRGECCGAFKYKGFIEANDIAK----GFVDVIVTEG-FSGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLR 285 (364)
Q Consensus 211 L~~~~~~~~nF~GniEg~~i~~----g~~DVvV~DG-FtGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~ 285 (364)
|++. .++..|..-++-+|. ++.|+|||== =.|=+.+|+..-
T Consensus 233 l~~~---gi~~~GP~paDt~F~~~~~~~~D~vlamYHDQglip~K~~~f------------------------------- 278 (329)
T PRK03367 233 LRAQ---GMNLNGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGF------------------------------- 278 (329)
T ss_pred HHHC---CCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCC-------------------------------
T ss_conf 9976---998789968357878864578999998251452066653046-------------------------------
Q ss_pred HHHHHCCHHHCCCEEEEEECCEE----------EEECCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 99972696870874674216148----------98388998689999999999999607
Q gi|254780498|r 286 EVKEGFDPRNFNGGVLLGVDGLV----------VKGHGSSDAKSIFNVLGIAHNMSQNG 334 (364)
Q Consensus 286 ~~~~~~d~~~~gGa~llGl~g~v----------ik~HG~s~~~a~~~ai~~a~~~~~~~ 334 (364)
..|=-+-|||.=+- |-+-|.+|..++.+||++|.+++++.
T Consensus 279 ---------~~~VnvtlGLp~iRtS~dHGTa~diagkg~A~~~s~~~Ai~~A~~~~~n~ 328 (329)
T PRK03367 279 ---------GRGVNITLGLPFIRTSVDHGTALELAGRGKADVGSFITALNLAIKMIVNT 328 (329)
T ss_pred ---------CCCEEEECCCCEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf ---------76179963899247789987056662789899699999999999998607
No 26
>PRK03743 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Validated
Probab=98.69 E-value=5.1e-06 Score=57.84 Aligned_cols=272 Identities=17% Similarity=0.184 Sum_probs=153.5
Q ss_pred EEEEEECCCCC--CCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCC---------CCCCCC
Q ss_conf 39999746877--7817779999999985799179997898999999862697515579977852---------017783
Q gi|254780498|r 13 DTISLDLMGGD--LGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEV---------SIAMDE 81 (364)
Q Consensus 13 ~kIAVDaMGGD--~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~---------vI~mde 81 (364)
.+||| .||-= -||+.+++.... .+-.....++++|+.+.++...+..+...+.-.|-+.++ ++....
T Consensus 4 P~IaI-T~GDPaGIGpEIi~Kal~~-~~~~~~~~~viigd~~~l~~~~~~l~~~~~~~~i~~~~~~~~~~~~i~vi~~~~ 81 (333)
T PRK03743 4 PIIAI-PMGDPAGIGPEIVVKSLND-KEIYDVCKPVVIGDAKVLEQAMKFCGVDLNINKIKTPAEGKYELGTIDLIDLGN 81 (333)
T ss_pred CEEEE-ECCCCCHHHHHHHHHHHHC-CCHHCCCCEEEEECHHHHHHHHHHHCCCCCEEECCCHHHHHCCCCCCEEEECCC
T ss_conf 98999-3888517489999999958-603408999999889999999998098985367288767435468712774687
Q ss_pred HHHHHHHHCCC--------CHHHHHHHHHHHCCCCEEEEEEC-CHHHHHHHH------HHHCCCCCCCCCCCHHHCCCCC
Q ss_conf 06799971376--------42799999998549953999706-426788888------7532255676322001105588
Q gi|254780498|r 82 RPADALRRGRN--------VSSMWRAIEAVKKNQAASVVTAG-NTGALIAMA------RLCLSRISGVDRPSLAAFWPTV 146 (364)
Q Consensus 82 ~P~~AlR~kK~--------~SSm~~a~~lvk~g~aDa~VSaG-nTGA~la~a------~~~lg~i~Gv~RPala~~~Pt~ 146 (364)
.....+.-++. -.|+..|++++++|++||+|.+= |-.++-.++ +-+|..+-+...+..+-. +.
T Consensus 82 ~~~~~~~~G~~s~~~g~~a~~~l~~A~~~~~~g~~dalVT~PInK~~l~~ag~~f~GHTE~La~~~~~~~~~mml~--~~ 159 (333)
T PRK03743 82 VDIDELKWGKVQALAGKAAFEYIKKSVELAKAGKVDAIATTPINKEALKAAGVNYIGHTEILADLTDTEDPLTMFE--VH 159 (333)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCEEHEE--CC
T ss_conf 7623267798688999999999999999997398677987886455475448998987999999867886120001--28
Q ss_pred CCCEEEE-------ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEE--E--CCCCCCCCC---HHHHHHHHHHH
Q ss_conf 9845998-------61327778989999999999999998568999658998--4--045555565---79999999974
Q gi|254780498|r 147 KGKCIIL-------DVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLL--N--VGTEEIKGN---DVLQESARLLR 212 (364)
Q Consensus 147 ~g~~vll-------D~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLL--N--iG~E~~KG~---~~~kea~~LL~ 212 (364)
+=.++++ |+-.+ -+.+.+.+....-..+.|. +++.+||+|++ | -|+.-.=|+ +.+.-|-+.|+
T Consensus 160 ~L~V~l~TtHipLk~V~~~--it~~~I~~~i~~~~~~lk~-~gi~~PrIaV~GLNPHAGE~G~~G~EE~~iI~PAI~~lk 236 (333)
T PRK03743 160 NLRVFFLTRHVSLRKACDL--VTKERVLDYIIRCTKALEK-LGVKNPKMAVAGLNPHSGEHGLFGREEMDEIVPAIEEAQ 236 (333)
T ss_pred CCEEEEECCCCCHHHHHHH--HHHHHHHHHHHHHHHHHHH-CCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 7379987788888999774--5489999999999999998-099998289998489876667666413113099999999
Q ss_pred HCCCCCCCEECCCCHHHCC----CCCCCEEEECC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 0245713200234554532----45683899755-127889999888899999999986322208899999989999999
Q gi|254780498|r 213 GECCGAFKYKGFIEANDIA----KGFVDVIVTEG-FSGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREV 287 (364)
Q Consensus 213 ~~~~~~~nF~GniEg~~i~----~g~~DVvV~DG-FtGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~ 287 (364)
+. .++..|.+-++-+| .++.|++||== =.|=|.+|+..-
T Consensus 237 ~~---gi~v~GP~paDt~F~~~~~~~~D~vlamYHDQglip~K~l~f--------------------------------- 280 (333)
T PRK03743 237 KM---GINVVGPVPADSVFHLALQGRYDAVLSLYHDQGHIATKTLDF--------------------------------- 280 (333)
T ss_pred HC---CCCEECCCCCHHHHHHHCCCCCCEEEECCCCCCHHHHHHCCC---------------------------------
T ss_conf 77---986768999567777511588898997674542076652357---------------------------------
Q ss_pred HHHCCHHHCCCEEEEEECCEE----------EEECCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 972696870874674216148----------98388998689999999999999607
Q gi|254780498|r 288 KEGFDPRNFNGGVLLGVDGLV----------VKGHGSSDAKSIFNVLGIAHNMSQNG 334 (364)
Q Consensus 288 ~~~~d~~~~gGa~llGl~g~v----------ik~HG~s~~~a~~~ai~~a~~~~~~~ 334 (364)
..|=-+-|||.=+- |.+-|.++..++.+||+.|.+++++.
T Consensus 281 -------~~~Vn~tlGLp~irtSpdHGTAfdIagk~~A~~~s~~~Ai~~a~~~a~~~ 330 (333)
T PRK03743 281 -------ERTISITNGLPFLRTSVDHGTAFDIAGTGIASSVSMEEAIKLAAKYAPKF 330 (333)
T ss_pred -------CCCEEEECCCCEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf -------87479946999247789987046661789899699999999999999874
No 27
>PRK00232 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed
Probab=98.68 E-value=1.7e-05 Score=54.60 Aligned_cols=271 Identities=19% Similarity=0.184 Sum_probs=160.3
Q ss_pred EEEEECCC--CCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCC----------CCCCCCC
Q ss_conf 99997468--77781777999999998579917999789899999986269751557997785----------2017783
Q gi|254780498|r 14 TISLDLMG--GDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCE----------VSIAMDE 81 (364)
Q Consensus 14 kIAVDaMG--GD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~----------~vI~mde 81 (364)
+||| .|| .--||+.+++..... +.....+++++|+.+.++...+..++..+..+|.+.. .++..+-
T Consensus 6 ~IaI-T~GDPaGIGpEIilKal~~~-~~~~~~~~viigd~~~l~~~~~~lg~~~~~~~i~~~~~~~~~~~~~i~v~~~~~ 83 (334)
T PRK00232 6 RIAI-TPGDPAGIGPELIAKLLAQP-DVRWPAHLVVIADRALLEERAAILGLPLDLRPYSPDAPAAPQAAGTLTLLDVDL 83 (334)
T ss_pred CEEE-ECCCCCHHHHHHHHHHHHCC-CCCCCCCEEEEECHHHHHHHHHHCCCCCCEEEECCHHHHHHCCCCCCEEEECCC
T ss_conf 2899-68886353899999998481-304898889998899999999985999706873774554434589825985676
Q ss_pred HHHHHHHHCCC--------CHHHHHHHHHHHCCCCEEEEEEC-CHHHHHHH------HHHHCCCCCCCCCCCHHHCCCCC
Q ss_conf 06799971376--------42799999998549953999706-42678888------87532255676322001105588
Q gi|254780498|r 82 RPADALRRGRN--------VSSMWRAIEAVKKNQAASVVTAG-NTGALIAM------ARLCLSRISGVDRPSLAAFWPTV 146 (364)
Q Consensus 82 ~P~~AlR~kK~--------~SSm~~a~~lvk~g~aDa~VSaG-nTGA~la~------a~~~lg~i~Gv~RPala~~~Pt~ 146 (364)
.....+.-++. -.|+-.|++++++|++||+|.+= |-.++-.+ -+-+|..+-|..++. |-++ +.
T Consensus 84 ~~~~~v~~G~~s~~~g~~~~~~i~~Av~~~~~g~~~alVT~PInK~~i~~aG~~f~GHTE~La~~~~~~~~~-Mml~-~~ 161 (334)
T PRK00232 84 LDPADVPFGQLSAANGHYVLETLARALDLALAGEFDAICTAPVNKGAINAAGIPFSGHTEFFAELSGTTGVV-MMLA-TE 161 (334)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCE-EEEE-CC
T ss_conf 753457889868899999999999999999759977898777578999857999898799999986899806-8897-38
Q ss_pred CCCEEEE-------ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE----CCCCCCCCC---HHHHHHHHHHH
Q ss_conf 9845998-------613277789899999999999999985689996589984----045555565---79999999974
Q gi|254780498|r 147 KGKCIIL-------DVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLLN----VGTEEIKGN---DVLQESARLLR 212 (364)
Q Consensus 147 ~g~~vll-------D~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLLN----iG~E~~KG~---~~~kea~~LL~ 212 (364)
+=.++++ |+--+ -+.+.+.+...+-..+.+.. ++++||+|.+- -|+.-.=|+ +.+.-|-+.|+
T Consensus 162 ~L~V~l~TtHipLk~V~~~--It~~~I~~~i~~~~~~lk~~-gi~~PrIaV~GLNPHAGE~G~~G~EE~~iI~PaI~~l~ 238 (334)
T PRK00232 162 ELRVALVTTHIPLRDVADA--ITPERLERVIRLLHADLRRK-GIAEPRIAVCGLNPHAGEGGHFGREEIDIIIPALEELR 238 (334)
T ss_pred CEEEEEEEECCHHHHHHHH--CCHHHHHHHHHHHHHHHHHC-CCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 7069999724719999886--69999999999999999972-99898479997289875456666733777999999999
Q ss_pred HCCCCCCCEECCCCHHHCCC----CCCCEEEECC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 02457132002345545324----5683899755-127889999888899999999986322208899999989999999
Q gi|254780498|r 213 GECCGAFKYKGFIEANDIAK----GFVDVIVTEG-FSGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREV 287 (364)
Q Consensus 213 ~~~~~~~nF~GniEg~~i~~----g~~DVvV~DG-FtGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~ 287 (364)
+. .++..|.+-++-+|. ++.|++||== =.|=|.+|+..
T Consensus 239 ~~---gi~v~GP~paDt~F~~~~~~~~D~~vamYHDQglip~K~~~---------------------------------- 281 (334)
T PRK00232 239 AE---GINLIGPLPADTLFLPAYLGDFDAVVAMYHDQGLPVLKYLG---------------------------------- 281 (334)
T ss_pred HC---CCEEECCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHCC----------------------------------
T ss_conf 78---91288990828887765505899999955243127665235----------------------------------
Q ss_pred HHHCCHHHCCCEEEEEECCEE----------EEECCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 972696870874674216148----------98388998689999999999999607
Q gi|254780498|r 288 KEGFDPRNFNGGVLLGVDGLV----------VKGHGSSDAKSIFNVLGIAHNMSQNG 334 (364)
Q Consensus 288 ~~~~d~~~~gGa~llGl~g~v----------ik~HG~s~~~a~~~ai~~a~~~~~~~ 334 (364)
.+ .|=-+-|||.=+- |.+.|-++..++.+||+.|.++.+++
T Consensus 282 -----f~-~~Vn~tlGLp~iRtSpdHGTa~diagk~~A~~~s~~~Ai~~A~~~a~~r 332 (334)
T PRK00232 282 -----FG-RGVNVTLGLPFIRTSVDHGTALDIAGKGIADVGSFITALNLAIRMAANR 332 (334)
T ss_pred -----CC-CCEEEECCCCEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf -----67-6279953899147789987066661789899699999999999999852
No 28
>PRK04507 consensus
Probab=98.64 E-value=5e-05 Score=51.59 Aligned_cols=268 Identities=15% Similarity=0.178 Sum_probs=154.0
Q ss_pred EEEEEEECCCCC--CCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCC-CCHHHH---
Q ss_conf 239999746877--78177799999999857991799978989999998626975155799778520177-830679---
Q gi|254780498|r 12 VDTISLDLMGGD--LGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVSIAM-DERPAD--- 85 (364)
Q Consensus 12 m~kIAVDaMGGD--~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~vI~m-de~P~~--- 85 (364)
+.+||| .||== -||+.+++... +...+.+++++|+.+.++......... +++++.++.... .+-+..
T Consensus 3 ~P~IaI-T~GDPaGIGPEIilK~~~---~~~~~~~~vvigd~~~l~~~~~~l~~~---~~~~~~~~~~~~~~~l~~~~~~ 75 (323)
T PRK04507 3 VPSLAL-VPGEPAGIGPELCVRLAQ---QPRSDAHLIAYADPDTLHSAAKALSLP---VRLLDPDQPARAPGDLPLHPVR 75 (323)
T ss_pred CCEEEE-ECCCCCHHHHHHHHHHHH---CCCCCCCEEEEECHHHHHHHHHHCCCC---EEECCCCCHHHCCCCCEEEECC
T ss_conf 983899-158862669999999986---664589989998999999999866998---1762732043268972252134
Q ss_pred ---HHHHCCC--------CHHHHHHHHHHHCCCCEEEEEEC-CHHHHHHHH------HHHCCCCCCCCCCCHHHCCCCCC
Q ss_conf ---9971376--------42799999998549953999706-426788888------75322556763220011055889
Q gi|254780498|r 86 ---ALRRGRN--------VSSMWRAIEAVKKNQAASVVTAG-NTGALIAMA------RLCLSRISGVDRPSLAAFWPTVK 147 (364)
Q Consensus 86 ---AlR~kK~--------~SSm~~a~~lvk~g~aDa~VSaG-nTGA~la~a------~~~lg~i~Gv~RPala~~~Pt~~ 147 (364)
.++-++. -.|+..|++++++|++||+|.+= |--++-.++ +-+|...-|.. .+|.++ +.+
T Consensus 76 ~~~~~~~G~~~~~~g~~~~~~l~~Av~~~~~g~~~aiVTaPInK~~l~~aG~~f~GHTE~La~~~~~~--~~Mml~-~~~ 152 (323)
T PRK04507 76 QAVPTRFGAPDPANAAAVIAGLRGAAGDCLHGRLQGIVTGPVHKAVINAGGIAYTGTTELLAAQAGCP--VVMMLA-NSI 152 (323)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHHCCC--EEEEEE-CCC
T ss_conf 55767689868789999999999999999759977999775369999857999897269998873882--688885-277
Q ss_pred CCEEEE-------ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE----CCCCCCCCCHH---HHHHHHHHHH
Q ss_conf 845998-------613277789899999999999999985689996589984----04555556579---9999999740
Q gi|254780498|r 148 GKCIIL-------DVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLLN----VGTEEIKGNDV---LQESARLLRG 213 (364)
Q Consensus 148 g~~vll-------D~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLLN----iG~E~~KG~~~---~kea~~LL~~ 213 (364)
=+++++ |+-. .-+.+.+.+....-....+.-+|+++||++.+- -|+.-.-|+|. +.-|-+-|++
T Consensus 153 LrV~l~TtHIpLk~V~~--~It~e~I~~~i~l~~~~l~~~fgi~~PrIaV~gLNPHAGE~G~~G~EE~~iI~Pai~~~~~ 230 (323)
T PRK04507 153 VRVALVTTHLPLRAVPD--AITADALERCLRITHTAMQRDFGLEHPRIAVLGLNPHAGEDGLLGREELDVVIPVLEQLRG 230 (323)
T ss_pred CEEEEECCCCCHHHHHH--HCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 47998413477999998--7199999999999999999963998995899604887666676650223232789999996
Q ss_pred CCCCCCCEECCCCHHHCCC----CCCCEEEECC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 2457132002345545324----5683899755-1278899998888999999999863222088999999899999999
Q gi|254780498|r 214 ECCGAFKYKGFIEANDIAK----GFVDVIVTEG-FSGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVK 288 (364)
Q Consensus 214 ~~~~~~nF~GniEg~~i~~----g~~DVvV~DG-FtGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~ 288 (364)
. .++..|.+-++-+|. ++.|+|||== =.|=+.+|+..-
T Consensus 231 ~---g~~~~GP~paDt~F~~~~~~~~D~vlamYHDQglip~K~l~f---------------------------------- 273 (323)
T PRK04507 231 E---GMQLIGPLPADTAFLPQKLIGFDAVVAMYHDQGLPVLKYSGF---------------------------------- 273 (323)
T ss_pred C---CCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCC----------------------------------
T ss_conf 3---988789968077876642469899998261454487875047----------------------------------
Q ss_pred HHCCHHHCCCEEEEEECCEE----------EEECCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 72696870874674216148----------98388998689999999999999607
Q gi|254780498|r 289 EGFDPRNFNGGVLLGVDGLV----------VKGHGSSDAKSIFNVLGIAHNMSQNG 334 (364)
Q Consensus 289 ~~~d~~~~gGa~llGl~g~v----------ik~HG~s~~~a~~~ai~~a~~~~~~~ 334 (364)
..|=-+-|||.=+- |-+.|-+|..++.+||++|.++.+++
T Consensus 274 ------~~~Vn~tlGLP~irtS~dHGta~diag~g~A~~~s~~~Ai~la~~~~~~r 323 (323)
T PRK04507 274 ------EQAVNITLGLPYPRVAVDHGTALELAGRGVADPSSLMAATALCARLAARR 323 (323)
T ss_pred ------CCCEEEECCCCEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf ------87279943899027789987156660789899699999999999998549
No 29
>PRK03877 consensus
Probab=98.46 E-value=3.6e-05 Score=52.51 Aligned_cols=268 Identities=22% Similarity=0.264 Sum_probs=154.1
Q ss_pred EEEEECCC--CCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCC---------CCCCCH
Q ss_conf 99997468--7778177799999999857991799978989999998626975155799778520---------177830
Q gi|254780498|r 14 TISLDLMG--GDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVS---------IAMDER 82 (364)
Q Consensus 14 kIAVDaMG--GD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~v---------I~mde~ 82 (364)
+||| .|| .--||+.+++..... +-....+++++|+.+.++...+......+...+-+.++. +..+..
T Consensus 4 ~IaI-T~GDPaGIGpEIilKal~~~-~~~~~~~~vvigd~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~ 81 (328)
T PRK03877 4 IIGI-TMGDAAGVGPEIIVKALADK-SVYEQCRPLVIGDAKRLERAGRIVGSELKVRAIQDPDEARFEFGTIDCIDLDLL 81 (328)
T ss_pred EEEE-ECCCCCHHHHHHHHHHHHCC-HHHCCCCEEEEECHHHHHHHHHHCCCCCCEEECCCHHHHHCCCCCCEEEECCCC
T ss_conf 7999-15885376999999999681-135059999997899999999982999714673897785235893158745546
Q ss_pred HHHHHHHCCC--------CHHHHHHHHHHHCCCCEEEEEEC-CHHHHHHHH------HHHCCCCCCCCCCCHHHCCCCCC
Q ss_conf 6799971376--------42799999998549953999706-426788888------75322556763220011055889
Q gi|254780498|r 83 PADALRRGRN--------VSSMWRAIEAVKKNQAASVVTAG-NTGALIAMA------RLCLSRISGVDRPSLAAFWPTVK 147 (364)
Q Consensus 83 P~~AlR~kK~--------~SSm~~a~~lvk~g~aDa~VSaG-nTGA~la~a------~~~lg~i~Gv~RPala~~~Pt~~ 147 (364)
+.. +.-++. -.|+-.|++++++|++||+|.+= |-.++-..+ +.+|..+-+..++..+-+ +.+
T Consensus 82 ~~~-~~~G~~~~~~g~~~~~sl~~A~~~~~~g~~~alVT~PInK~~i~~ag~~f~GHTE~La~~~~~~~~~Mml~--~~~ 158 (328)
T PRK03877 82 PAD-LPFGKVSAVAGDAAFRYIERAVELAKAGKIDAICTAPLNKEALHAGGHMFPGHTEILAHLTGTEEVSMMLV--SPK 158 (328)
T ss_pred CCC-CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEE--CCC
T ss_conf 677-78898798899999999999999997498687996780678898579998981999998864787257785--598
Q ss_pred CCEEEE-------ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE----CCCCCCCCC-HH---HHHHHHHHH
Q ss_conf 845998-------613277789899999999999999985689996589984----045555565-79---999999974
Q gi|254780498|r 148 GKCIIL-------DVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLLN----VGTEEIKGN-DV---LQESARLLR 212 (364)
Q Consensus 148 g~~vll-------D~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLLN----iG~E~~KG~-~~---~kea~~LL~ 212 (364)
=+++++ |+-..+ +.+.+.+.-.+-..+.|. +++++||++++- -|+.-.-|+ |. +.-|-+-|+
T Consensus 159 LrV~l~TtHipLk~V~~~I--t~~~I~~~i~l~~~~lk~-~gi~~PrIaV~GLNPHAGE~G~~G~~EE~~iI~PaI~~l~ 235 (328)
T PRK03877 159 LKVIHVTTHVGLIDAIDKI--EPERVYRVIELAHETLVR-AGIKNPRIAVCGINPHAGENGLFGYGEEEEKIVPAIEAAQ 235 (328)
T ss_pred CEEEEEEECCCHHHHHHHC--CHHHHHHHHHHHHHHHHH-CCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 6899850057479999853--999999999999999998-0999971899852798765566586267877999999999
Q ss_pred HCCCCCCCEECCCCHHHCC----CCCCCEEEECC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 0245713200234554532----45683899755-127889999888899999999986322208899999989999999
Q gi|254780498|r 213 GECCGAFKYKGFIEANDIA----KGFVDVIVTEG-FSGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREV 287 (364)
Q Consensus 213 ~~~~~~~nF~GniEg~~i~----~g~~DVvV~DG-FtGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~ 287 (364)
+. .++..|..-++-+| .+..|++||== =.|=|.+|+.. +
T Consensus 236 ~~---gi~i~GP~paDt~F~~~~~~~~D~vlaMYHDQglip~K~l~---------f------------------------ 279 (328)
T PRK03877 236 AE---GIDVEGPLPADTLFFRAGRGDFDLVVAMYHDQGHGPVKVLG---------L------------------------ 279 (328)
T ss_pred HC---CCEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHCC---------C------------------------
T ss_conf 78---97088573818898876447899999955355316564224---------7------------------------
Q ss_pred HHHCCHHHCCCEEEEEECCEE----------EEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 972696870874674216148----------983889986899999999999996
Q gi|254780498|r 288 KEGFDPRNFNGGVLLGVDGLV----------VKGHGSSDAKSIFNVLGIAHNMSQ 332 (364)
Q Consensus 288 ~~~~d~~~~gGa~llGl~g~v----------ik~HG~s~~~a~~~ai~~a~~~~~ 332 (364)
..|=-+-|||.=+- |-+.|-+|+.++.+||+.|.++..
T Consensus 280 -------~~~vn~TlGLp~irtSpdHGta~diaGk~~A~~~s~~~Ai~~A~~~a~ 327 (328)
T PRK03877 280 -------EAGVNITVGLPVIRTSVDHGTAFDIAGKGIADERSMLEALRQAAELAP 327 (328)
T ss_pred -------CCCEEEECCCCEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCC
T ss_conf -------874799569991377899870566607898986999999999998726
No 30
>PRK02746 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Provisional
Probab=98.33 E-value=0.00032 Score=46.52 Aligned_cols=272 Identities=17% Similarity=0.162 Sum_probs=148.9
Q ss_pred EEEEEECCC--CCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCC-------CCCCEEEECCCC--CCCCCC
Q ss_conf 399997468--777817779999999985799179997898999999862697-------515579977852--017783
Q gi|254780498|r 13 DTISLDLMG--GDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPL-------LKERSCFHHCEV--SIAMDE 81 (364)
Q Consensus 13 ~kIAVDaMG--GD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~-------~~~ri~Ii~a~~--vI~mde 81 (364)
.+||| .|| .--||+.+++.... .+-.....++++|+.+.++....+... ..+.+.+++.+. .+....
T Consensus 2 P~IaI-T~GDPaGIGpEIilKal~~-~~~~~~~~~vvig~~~~l~~~~~~l~~~~~~~~~~~~~i~v~~~~~~~~~~~G~ 79 (332)
T PRK02746 2 PRLAI-TLGDPAGIGPEVILKALAS-PELPKNIQPTLVGCRQLLEATYQQLKSLGIEPLADPANLDILDLPLDSEITPGK 79 (332)
T ss_pred CEEEE-CCCCCCHHHHHHHHHHHHC-HHHCCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCC
T ss_conf 98999-0588536689999999857-100069899999799999999998444886565881106165057777778898
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEC-CHHHHHHH------HHHHCCCCCCCCCCCHHHCC--CCCCCC--E
Q ss_conf 0679997137642799999998549953999706-42678888------87532255676322001105--588984--5
Q gi|254780498|r 82 RPADALRRGRNVSSMWRAIEAVKKNQAASVVTAG-NTGALIAM------ARLCLSRISGVDRPSLAAFW--PTVKGK--C 150 (364)
Q Consensus 82 ~P~~AlR~kK~~SSm~~a~~lvk~g~aDa~VSaG-nTGA~la~------a~~~lg~i~Gv~RPala~~~--Pt~~g~--~ 150 (364)
.-..+=+.- -.|+..|++++++|++||+|.+= |-.++-.+ =+-+|..+-|..++..+-.- |-.+.+ +
T Consensus 80 ~~~~~g~~~--~~~l~~Av~~~~~g~~~alVT~PInK~~i~~ag~~F~GHTE~La~~~~~~~~~Mml~~~s~~~~~~LrV 157 (332)
T PRK02746 80 GSAASGAAS--FAYLTTAIEITLEGEFRALVTAPIAKSAWHAAGHHYPGQTEVLAELAGVERFGMLFTARSPHTGWRLNT 157 (332)
T ss_pred CCHHHHHHH--HHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCEEE
T ss_conf 698999999--999999999997599777875785689997467887768999999858997259987436666761479
Q ss_pred EEE-------ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE----CCCCCCCCCH---HHHHHHHHHHHCCC
Q ss_conf 998-------613277789899999999999999985689996589984----0455555657---99999999740245
Q gi|254780498|r 151 IIL-------DVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLLN----VGTEEIKGND---VLQESARLLRGECC 216 (364)
Q Consensus 151 vll-------D~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLLN----iG~E~~KG~~---~~kea~~LL~~~~~ 216 (364)
+++ |+-.++ +.+.+.+-..+-..+.|. ++++||++.+- -|+.-.=|+| .+.-|-+-|++..
T Consensus 158 ~l~TtHipLk~V~~~I--t~~~I~~~i~~~~~~lk~--gi~~PrIaV~GLNPHAGE~G~~G~EE~~iI~PaI~~l~~~~- 232 (332)
T PRK02746 158 LLATTHIPLSQVPKTL--TPELITSKLDLLLDFCRK--FIDKPRIAIAGLNPHAGEQGQLGSEEKDWLIPWLESWRQKN- 232 (332)
T ss_pred EEEECCCCHHHHHHHH--CHHHHHHHHHHHHHHHHH--CCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-
T ss_conf 8750565799999875--999999999999999982--88788748996488876567677321011399999999757-
Q ss_pred CCCCEECCCCHHHCCC------------CCCCEEEECC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 7132002345545324------------5683899755-12788999988889999999998632220889999998999
Q gi|254780498|r 217 GAFKYKGFIEANDIAK------------GFVDVIVTEG-FSGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKS 283 (364)
Q Consensus 217 ~~~nF~GniEg~~i~~------------g~~DVvV~DG-FtGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~ 283 (364)
.+++..|.+-++-+|. +..|+|||== =.|=+.+|+..
T Consensus 233 ~gi~i~GP~paDt~F~~a~~~ff~~~~~~~~D~vlaMYHDQglip~K~l~------------------------------ 282 (332)
T PRK02746 233 PDIQLLGPIPPDTCWLSAAQAWYGKGVAEAPDGYLALYHDQGLIPVKLLA------------------------------ 282 (332)
T ss_pred CCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHEECC------------------------------
T ss_conf 99858627681366555544220512135689899844354552230135------------------------------
Q ss_pred HHHHHHHCCHHHCCCEEEEEEC--------CEE--EEECCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 9999972696870874674216--------148--9838899868999999999999960
Q gi|254780498|r 284 LREVKEGFDPRNFNGGVLLGVD--------GLV--VKGHGSSDAKSIFNVLGIAHNMSQN 333 (364)
Q Consensus 284 l~~~~~~~d~~~~gGa~llGl~--------g~v--ik~HG~s~~~a~~~ai~~a~~~~~~ 333 (364)
. ..+=-+-|||. |+. |-+-|.+|+.++.+||+.|.++.+.
T Consensus 283 ---------f-~~~Vn~TlGLp~iRtS~dHGTA~diagk~~A~~~S~~~Ai~~A~~la~~ 332 (332)
T PRK02746 283 ---------F-DYAVNTTIGLPFIRTSPDHGTAFDIAGKGIARPQSMKAAIKLAWELSQQ 332 (332)
T ss_pred ---------C-CCCEEEECCCCEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf ---------6-7637994599912678998706666078989969999999999998529
No 31
>PRK03371 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase 2; Provisional
Probab=98.26 E-value=0.00011 Score=49.45 Aligned_cols=267 Identities=16% Similarity=0.189 Sum_probs=149.8
Q ss_pred EEEEECCC--CCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCC-------CCCCCCCHHH
Q ss_conf 99997468--77781777999999998579917999789899999986269751557997785-------2017783067
Q gi|254780498|r 14 TISLDLMG--GDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCE-------VSIAMDERPA 84 (364)
Q Consensus 14 kIAVDaMG--GD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~-------~vI~mde~P~ 84 (364)
+||| .|| .--||+.+++.... .+.....++++|+...++......-...-.++.++.. ..+..-+.|.
T Consensus 4 ~IaI-T~GDPaGIGpEIilKal~~--~~~~~~~~ivig~~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~i~d~~~ 80 (326)
T PRK03371 4 TVAI-TMGDPAGIGPEIIVKALSE--DGLNGAPLVVIGCLATLKRLQAKGITPNVELRAIERVAEARFAPGIIHVIDEPL 80 (326)
T ss_pred EEEE-ECCCCCHHHHHHHHHHHHC--CCCCCCCEEEEECHHHHHHHHHHCCCCCCEEEECCCHHHHCCCCCEEEEEECCC
T ss_conf 6999-4578526399999999857--440389989997899999999847998820464598767125898678983677
Q ss_pred H---HHHHCCC--------CHHHHHHHHHHHCCCCEEEEEEC-CHHHHHHHH------HHHCCCCCCCCCCCHHHCCCCC
Q ss_conf 9---9971376--------42799999998549953999706-426788888------7532255676322001105588
Q gi|254780498|r 85 D---ALRRGRN--------VSSMWRAIEAVKKNQAASVVTAG-NTGALIAMA------RLCLSRISGVDRPSLAAFWPTV 146 (364)
Q Consensus 85 ~---AlR~kK~--------~SSm~~a~~lvk~g~aDa~VSaG-nTGA~la~a------~~~lg~i~Gv~RPala~~~Pt~ 146 (364)
. .++-++. -.|+..|++++++|++||+|.+= |-.++-.++ +-+|..+-+...+ .|.++ +.
T Consensus 81 ~~~~~~~~G~~~~~~g~~a~~sl~~Av~~~~~g~~~alVT~PInK~~i~~aG~~f~GHTE~La~~~~~~~~-~Mml~-~~ 158 (326)
T PRK03371 81 AQPEALEAGKVQAQAGDLAYRCVKRATELALRGDVQAIATAPLNKEALHLAGHNYPGHTELLATLTHSRDY-AMVLY-TD 158 (326)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHHCCCCH-HHHHH-CC
T ss_conf 77455778982889999999999999999974985779967857788986799999869999887447863-77731-68
Q ss_pred CCCEEEE-------ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE----CCCCCCCCCH---HHHHHHHHHH
Q ss_conf 9845998-------613277789899999999999999985689996589984----0455555657---9999999974
Q gi|254780498|r 147 KGKCIIL-------DVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLLN----VGTEEIKGND---VLQESARLLR 212 (364)
Q Consensus 147 ~g~~vll-------D~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLLN----iG~E~~KG~~---~~kea~~LL~ 212 (364)
+=+++++ |+-..+ +.+.+.+.-.+-..+.|. +++++||++++- -|+.-.-|+| .+.-|-+-|+
T Consensus 159 ~LrV~lvTtHipLk~V~~~I--t~~~I~~~i~l~~~~lk~-~gi~~PrIaV~GLNPHAGE~G~~G~EE~~iI~PaI~~l~ 235 (326)
T PRK03371 159 KLKVIHVSTHIALRKFLDTL--STARVETVIGIADTFLKR-VGYVKPRIAVAGVNPHAGENGLFGDEETRILTPAITDAR 235 (326)
T ss_pred CCEEEEECCCCCHHHHHHHH--HHHHHHHHHHHHHHHHHH-HCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 74799836887699999998--499999999999999998-289887079995189876667775105562599999999
Q ss_pred HCCCCCCCEECCCCHHHCC----CCCCCEEEECCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 0245713200234554532----456838997551-27889999888899999999986322208899999989999999
Q gi|254780498|r 213 GECCGAFKYKGFIEANDIA----KGFVDVIVTEGF-SGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREV 287 (364)
Q Consensus 213 ~~~~~~~nF~GniEg~~i~----~g~~DVvV~DGF-tGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~ 287 (364)
+. .++..|..-++-+| .++.|+|||==- .|=|.+|+..
T Consensus 236 ~~---gi~v~GP~paDt~F~~~~~~~~D~vlaMYHDQglip~K~~~---------------------------------- 278 (326)
T PRK03371 236 AK---GMDVYGPCPPDTVFLQAYEGQYDMVVAMYHDQGHIPLKLLG---------------------------------- 278 (326)
T ss_pred HC---CCEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCC----------------------------------
T ss_conf 78---98798998818898874356899999805245316564225----------------------------------
Q ss_pred HHHCCHHHCCCEEEEEECCEE----------EEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 972696870874674216148----------98388998689999999999999
Q gi|254780498|r 288 KEGFDPRNFNGGVLLGVDGLV----------VKGHGSSDAKSIFNVLGIAHNMS 331 (364)
Q Consensus 288 ~~~~d~~~~gGa~llGl~g~v----------ik~HG~s~~~a~~~ai~~a~~~~ 331 (364)
. ..|=-+-|||.=+- |-+-|.++..++.+||+.|.++.
T Consensus 279 -----f-~~~Vn~TlGLp~iRtSpdHGTa~diagkg~A~~~s~~~Ai~~A~~~a 326 (326)
T PRK03371 279 -----F-YDGVNITAGLPFIRTSADHGTAFDIAWTGKAKSESMAVSIKLAMQLA 326 (326)
T ss_pred -----C-CCCEEEECCCCEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHC
T ss_conf -----7-87379946999147789987056661789899699999999999859
No 32
>pfam04166 PdxA Pyridoxal phosphate biosynthetic protein PdxA. In Escherichia coli the coenzyme pyridoxal 5'-phosphate is synthesized de novo by a pathway that is thought to involve the condensation of 4-(phosphohydroxy)-L-threonine and 1-deoxy-D-xylulose, catalysed by the enzymes PdxA and PdxJ, to form either pyridoxine (vitamin B6) or pyridoxine 5'-phosphate.
Probab=98.22 E-value=0.0002 Score=47.81 Aligned_cols=238 Identities=18% Similarity=0.153 Sum_probs=137.6
Q ss_pred CCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCC----------CCCCCHHHHHHHHCCC--------CHHHHHHHHH
Q ss_conf 991799978989999998626975155799778520----------1778306799971376--------4279999999
Q gi|254780498|r 41 PRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVS----------IAMDERPADALRRGRN--------VSSMWRAIEA 102 (364)
Q Consensus 41 ~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~v----------I~mde~P~~AlR~kK~--------~SSm~~a~~l 102 (364)
.....+++||.+.++...+..+... .++.++..+. +...+-+. .+.-++. -.|+-.|+++
T Consensus 7 ~~C~PVViGd~~lL~~~ak~lgl~~-~i~~I~~~~~~~~~~~~i~~v~~~~~~~-~~~~Gk~s~~~G~~~~~~l~~Av~~ 84 (299)
T pfam04166 7 EKCTPVVIADEALLERAAKLLGLPL-DLRDIEFVEPAQEEPAGLLVIDPLPLKV-PVVAGEVSAASGAYVLETLARAVAL 84 (299)
T ss_pred CCCCEEEEECHHHHHHHHHHCCCCC-EEEEECCHHHCCCCCCCEEEEECCCCCC-CCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 2897999989999999999829995-3898087554422568768970565677-7788985889999999999999999
Q ss_pred HHCCCCEEEEEEC-CHHHHHHHH------HHHCCCCCCCCCCCHHHCCCCCCCC-EEEE-------ECCCCCCCCHHHHH
Q ss_conf 8549953999706-426788888------7532255676322001105588984-5998-------61327778989999
Q gi|254780498|r 103 VKKNQAASVVTAG-NTGALIAMA------RLCLSRISGVDRPSLAAFWPTVKGK-CIIL-------DVGATIGSTVSHMV 167 (364)
Q Consensus 103 vk~g~aDa~VSaG-nTGA~la~a------~~~lg~i~Gv~RPala~~~Pt~~g~-~vll-------D~GAN~d~~~~~L~ 167 (364)
+++|++||+|.+= |-.++-.++ +-+|...-+...|..+-+ + +.. ++++ |+-.+ .+.+.+.
T Consensus 85 ~~~g~~dalVT~PInK~~i~~ag~~f~GHTE~La~~~~~~~~~Mml~--~-~~LrV~lvTtHipLk~V~~~--It~~~I~ 159 (299)
T pfam04166 85 ALDGEFDAIVTGPINKGALKDAGIPYSGHTEFLAERTGTHSVVMMLA--T-GDLRVALVTTHIPLKDVPDA--ITFELVE 159 (299)
T ss_pred HHCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEE--C-CCCEEEEECCCCCHHHHHHH--HHHHHHH
T ss_conf 97599889997973889998679998986899987636897379996--4-97489995346569999987--5199999
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEEEE----CCCCCCCCCHH---HHHHHHHHHHCCCCCCCEECCCCHHHCCC----CCCC
Q ss_conf 9999999999985689996589984----04555556579---99999997402457132002345545324----5683
Q gi|254780498|r 168 QLSILGSFFARSVAGINCPSIGLLN----VGTEEIKGNDV---LQESARLLRGECCGAFKYKGFIEANDIAK----GFVD 236 (364)
Q Consensus 168 qfA~mGs~yak~~~~~~~PrVgLLN----iG~E~~KG~~~---~kea~~LL~~~~~~~~nF~GniEg~~i~~----g~~D 236 (364)
+.-..-....+..+++++||++.+- -|+.-.-|+|. +.-|-+.|++ ..++..|..-++-+|. +..|
T Consensus 160 ~~i~~~~~~l~~~~gi~~PrIaV~gLNPHaGE~G~~G~EE~~iI~Pai~~~~~---~gi~v~GP~paDt~F~~~~~~~~D 236 (299)
T pfam04166 160 DFLRLLHKALREKFGIAEPRIAVAGLNPHAGEGGVLGREEIEEIIPALEQARA---EGIDLLGPLPADTAFRPVLLGRYD 236 (299)
T ss_pred HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH---CCCCCCCCCCCHHHHHHHHCCCCC
T ss_conf 99999999999964998980899944887665555641447888999999885---499758897943776541105789
Q ss_pred EEEECC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCEE-------
Q ss_conf 899755-127889999888899999999986322208899999989999999972696870874674216148-------
Q gi|254780498|r 237 VIVTEG-FSGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFDPRNFNGGVLLGVDGLV------- 308 (364)
Q Consensus 237 VvV~DG-FtGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~~~gGa~llGl~g~v------- 308 (364)
+|||== =.|=+.+|+..- ..|=-+-+||.=+-
T Consensus 237 ~v~amYHDQglip~K~~~f----------------------------------------~~~vn~t~GLp~irtS~dHGt 276 (299)
T pfam04166 237 AVLAMYHDQGLIPLKYLGF----------------------------------------DRGVNVTLGLPIIRTSVDHGT 276 (299)
T ss_pred EEEEECCCCCCHHHHHCCC----------------------------------------CCCEEEECCCCEEEECCCCCC
T ss_conf 9998052442076653356----------------------------------------873799448992377899870
Q ss_pred ---EEECCCCCHHHHHHHHHHHH
Q ss_conf ---98388998689999999999
Q gi|254780498|r 309 ---VKGHGSSDAKSIFNVLGIAH 328 (364)
Q Consensus 309 ---ik~HG~s~~~a~~~ai~~a~ 328 (364)
|-+-|-+++.++.+||++|.
T Consensus 277 a~diagk~~A~~~s~~~Ai~~Aa 299 (299)
T pfam04166 277 AFDIAGKGKADPGSLIAALKLAA 299 (299)
T ss_pred HHHHHCCCCCCHHHHHHHHHHHC
T ss_conf 56660789899699999999759
No 33
>COG4002 Predicted phosphotransacetylase [General function prediction only]
Probab=98.16 E-value=5.9e-06 Score=57.46 Aligned_cols=185 Identities=20% Similarity=0.350 Sum_probs=125.0
Q ss_pred HHHHHHCCCCEEEEEECCHHHHHHHHHH-HCCCCCCCCCCCHHHCCCCCC-CCEEEEECCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 9999854995399970642678888875-322556763220011055889-84599861327778989999999999999
Q gi|254780498|r 99 AIEAVKKNQAASVVTAGNTGALIAMARL-CLSRISGVDRPSLAAFWPTVK-GKCIILDVGATIGSTVSHMVQLSILGSFF 176 (364)
Q Consensus 99 a~~lvk~g~aDa~VSaGnTGA~la~a~~-~lg~i~Gv~RPala~~~Pt~~-g~~vllD~GAN~d~~~~~L~qfA~mGs~y 176 (364)
=++.+.+|++||.|- |++-++... .|+.--|+.+-|=++++-+.. ++++|.-+|..-.-+-+..+..+..++-|
T Consensus 55 lve~Lv~g~~daaVR----Gslsas~v~~eLkealgm~~~~Ras~le~~~~~~flLaPVGIDEg~ti~dk~ri~~laaef 130 (256)
T COG4002 55 LVEKLVDGEIDAAVR----GSLSASKVILELKEALGMKFYCRASILENPFTNGFLLAPVGIDEGKTIKDKIRIIELAAEF 130 (256)
T ss_pred HHHHHHCCCHHHHHH----CCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 999997450367774----4543225899999853887313210124588673487431148884177778999999999
Q ss_pred HHHHCCCCCCEEEEEECCCCCCCCCHH-HHHH---HHHHHHCCCCCCCEECC-CCH--------HHCCCCCCCEEEECCH
Q ss_conf 998568999658998404555556579-9999---99974024571320023-455--------4532456838997551
Q gi|254780498|r 177 ARSVAGINCPSIGLLNVGTEEIKGNDV-LQES---ARLLRGECCGAFKYKGF-IEA--------NDIAKGFVDVIVTEGF 243 (364)
Q Consensus 177 ak~~~~~~~PrVgLLNiG~E~~KG~~~-~kea---~~LL~~~~~~~~nF~Gn-iEg--------~~i~~g~~DVvV~DGF 243 (364)
.|. ++++ |+||.||=|--..-|+.- +.++ -+++.+ .|.|+ ++- .-+-+| -=|+-.||-
T Consensus 131 lrr-~~~e-p~VaVlSgGRlgDlGR~~~VDrtladgEfva~------~~k~~g~~v~H~~ILIEealkdg-nvIia~dGI 201 (256)
T COG4002 131 LRR-TGIE-PKVAVLSGGRLGDLGRNKEVDRTLADGEFVAE------HFKGNGVDVIHYGILIEEALKDG-NVIIAVDGI 201 (256)
T ss_pred HHH-HCCC-CCEEEECCCCCHHCCCCCHHHHHHHCHHHHHH------HHHCCCCEEEEEEEEHHHHHHCC-CEEEEECCC
T ss_conf 997-0989-61699507730002576212024323299999------87416822689666778786148-889975675
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCEEEEECCCCCHHHHHHH
Q ss_conf 27889999888899999999986322208899999989999999972696870874674216148983889986899999
Q gi|254780498|r 244 SGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFDPRNFNGGVLLGVDGLVVKGHGSSDAKSIFNV 323 (364)
Q Consensus 244 tGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~~~gGa~llGl~g~vik~HG~s~~~a~~~a 323 (364)
|||....+. + + -- -.+-||..+.|+-+.+-|-+..+..+..+++|
T Consensus 202 tGNLiFR~l-----------------------~-l---------vg--g~~g~GAp~al~~d~vFVDTSR~q~a~~yarA 246 (256)
T COG4002 202 TGNLIFRCL-----------------------G-L---------VG--GIRGYGAPIALDKDVVFVDTSRNQNAEGYARA 246 (256)
T ss_pred CCHHHHHHH-----------------------H-H---------HC--CCCCCCCCEEECCCCEEEECHHHHHHHHHHHH
T ss_conf 430455567-----------------------7-7---------53--66777883474488189866045548999999
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254780498|r 324 LGIAHNMS 331 (364)
Q Consensus 324 i~~a~~~~ 331 (364)
++.+....
T Consensus 247 lkfl~~~a 254 (256)
T COG4002 247 LKFLHGLA 254 (256)
T ss_pred HHHHHHHH
T ss_conf 99987541
No 34
>COG1995 PdxA Pyridoxal phosphate biosynthesis protein [Coenzyme metabolism]
Probab=97.91 E-value=0.0013 Score=42.61 Aligned_cols=282 Identities=19% Similarity=0.222 Sum_probs=155.7
Q ss_pred EEEEEEECCCCCC--CCHHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHCCCCCCCEEEECCC-CCC-----CCC--
Q ss_conf 2399997468777--817779999999985799-17999789899999986269751557997785-201-----778--
Q gi|254780498|r 12 VDTISLDLMGGDL--GARDLILGASKFLEAHPR-IRFLMYGDAKVCLPILDSHPLLKERSCFHHCE-VSI-----AMD-- 80 (364)
Q Consensus 12 m~kIAVDaMGGD~--~P~~vi~Ga~~al~~~~~-i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~-~vI-----~md-- 80 (364)
+.+||| .||-=. ||+. +.+++.+.+. .+++++||+..++.-.+..........+++.+ +.. ..-
T Consensus 3 ~~~iAi-t~GDPaGIGPEi----~~~~~~~~~~~~~~v~igd~~lL~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l 77 (332)
T COG1995 3 KPRIAI-TMGDPAGIGPEL----VALALAELPIKCELVVIGDKALLEAAAALLGLPVFLLEAIPDPYEAFAAGAIDLPDL 77 (332)
T ss_pred CCCEEE-CCCCCCCCCHHH----HHHHHCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCHHCCCCHHHHHHCCCCCEEEC
T ss_conf 885686-468866679999----998621046778769985899999999874665311001466044542147622422
Q ss_pred CHHH-HHHHHCCCC--------HHHHHHHHHHHCCCCEEEEEEC-CHHHHHHHHHHH------CCCCCCCCCCCHHHCCC
Q ss_conf 3067-999713764--------2799999998549953999706-426788888753------22556763220011055
Q gi|254780498|r 81 ERPA-DALRRGRNV--------SSMWRAIEAVKKNQAASVVTAG-NTGALIAMARLC------LSRISGVDRPSLAAFWP 144 (364)
Q Consensus 81 e~P~-~AlR~kK~~--------SSm~~a~~lvk~g~aDa~VSaG-nTGA~la~a~~~------lg~i~Gv~RPala~~~P 144 (364)
+.+. ..++..+.. -++-.|+++...|++||+|.+= |-.++-.++... |.-.-+..+|..|-.-|
T Consensus 78 ~~~~~~~v~~G~~~~~~g~~~~~~l~~A~~~a~~G~~~aivT~PI~K~~l~~AG~~y~GhTe~LA~~s~~~~~vMmla~~ 157 (332)
T COG1995 78 PLPLPAPVEAGQLSAANGAYVFETLKRAVELALAGEVDAIVTAPINKEALNDAGIPYPGHTEFLAELSGTHDPVMMLAVP 157 (332)
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEECC
T ss_conf 45776765688757134089999999999987367346799656478999964899897789999985799717986146
Q ss_pred CCCCCEE-------EEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEE--E--CCCCCCCCCHH---HHHHHHH
Q ss_conf 8898459-------9861327778989999999999999998568999658998--4--04555556579---9999999
Q gi|254780498|r 145 TVKGKCI-------ILDVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLL--N--VGTEEIKGNDV---LQESARL 210 (364)
Q Consensus 145 t~~g~~v-------llD~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLL--N--iG~E~~KG~~~---~kea~~L 210 (364)
.. .+. |-|+-. --+++.+.++......--+.-+|+++||++.. | -|+.-.-|+|. +.-+-+.
T Consensus 158 ~L--rv~lvTtHipL~~V~~--~iT~e~l~~~~~i~~~~L~~~fGi~~PriaVaGLNPHaGE~G~lG~EE~diI~Paie~ 233 (332)
T COG1995 158 EL--RVALVTTHIPLKDVPD--AITPELLLEVLRILDKDLRKKFGIAEPRIAVAGLNPHAGEGGLLGREEIDIIIPAIEE 233 (332)
T ss_pred CC--EEEEEEECCCHHHHHH--HHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 41--7998750461888776--6589999999999999999862988763688614898876777773477888999999
Q ss_pred HHHCCCCCCCEECCCCHHHCCCCC----CCEEEECC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 740245713200234554532456----83899755-1278899998888999999999863222088999999899999
Q gi|254780498|r 211 LRGECCGAFKYKGFIEANDIAKGF----VDVIVTEG-FSGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLR 285 (364)
Q Consensus 211 L~~~~~~~~nF~GniEg~~i~~g~----~DVvV~DG-FtGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~ 285 (364)
+|+. .|+++|.+-++-+|... .|.|||== =.|=|.||.. -+-+..+-+ +|.-+++-+
T Consensus 234 aR~~---Gi~~~GPlpADT~F~~~~~~~~DavlaMYHDQgliplK~l---------~Fd~~VNvt----lGLPfiRTS-- 295 (332)
T COG1995 234 ARAE---GIDLVGPLPADTLFHPAYLANYDAVLAMYHDQGLIPLKYL---------GFDRGVNVT----LGLPFIRTS-- 295 (332)
T ss_pred HHHH---CCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHH---------CCCCCEEEE----CCCCEEEEC--
T ss_conf 9981---8733489994144203455057879996226643556442---------235325773----388703406--
Q ss_pred HHHHHCCHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHCCH
Q ss_conf 99972696870874674216148983889986899999999999996070
Q gi|254780498|r 286 EVKEGFDPRNFNGGVLLGVDGLVVKGHGSSDAKSIFNVLGIAHNMSQNGF 335 (364)
Q Consensus 286 ~~~~~~d~~~~gGa~llGl~g~vik~HG~s~~~a~~~ai~~a~~~~~~~~ 335 (364)
+ .+|-|. =|-+.|.++..++..||++|.+++.+..
T Consensus 296 -------~-DHGTAf-------DiAgkGiA~~~S~~~Ai~lA~~l~~~~~ 330 (332)
T COG1995 296 -------V-DHGTAF-------DIAGKGIADPGSLIAAIKLAAKLAAKRA 330 (332)
T ss_pred -------C-CCCCHH-------HHHCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf -------8-762054-------3304785780689999999999986340
No 35
>PRK03946 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Provisional
Probab=97.64 E-value=0.0042 Score=39.44 Aligned_cols=246 Identities=16% Similarity=0.115 Sum_probs=134.3
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCC-CCCEEEECCCCC--CCCCC-HHHHHHHHCCCCHHHHHH
Q ss_conf 78177799999999857991799978989999998626975-155799778520--17783-067999713764279999
Q gi|254780498|r 24 LGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLL-KERSCFHHCEVS--IAMDE-RPADALRRGRNVSSMWRA 99 (364)
Q Consensus 24 ~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~-~~ri~Ii~a~~v--I~mde-~P~~AlR~kK~~SSm~~a 99 (364)
-||+.++++.. .+.+ ....+++|+.+.+.......... .+.+.+.+.... +.... ++..+ +.- -.|+-.|
T Consensus 14 IGPEIilKa~~-~~~~--~~~pii~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~g-~~~--~~~l~~A 87 (304)
T PRK03946 14 IGLEIALKSHE-EVSK--ICEPLYFIDEELLNQASQLLNLKIPNDFEIDEPGLLFEIKPGKVSAKSG-AYS--FESFKKA 87 (304)
T ss_pred HHHHHHHHHHH-HHHH--HCCEEEEECHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCHHHH-HHH--HHHHHHH
T ss_conf 39999999828-7686--2991999889999999998499996442132566445688998288999-999--9999999
Q ss_pred HHHHHCCCCEEEEEEC-CHHHHHHHH------HHHCCCCCCCCCCCHHHCCCCCCCCEEEE-------ECCCCCCCCHHH
Q ss_conf 9998549953999706-426788888------75322556763220011055889845998-------613277789899
Q gi|254780498|r 100 IEAVKKNQAASVVTAG-NTGALIAMA------RLCLSRISGVDRPSLAAFWPTVKGKCIIL-------DVGATIGSTVSH 165 (364)
Q Consensus 100 ~~lvk~g~aDa~VSaG-nTGA~la~a------~~~lg~i~Gv~RPala~~~Pt~~g~~vll-------D~GAN~d~~~~~ 165 (364)
++++++|++||+|.+= |-.++-.++ +-+|...-+ .. .+|.++ +.+=.++++ |+-.++ +.+.
T Consensus 88 i~~~~~g~~~aiVT~PInK~~i~~aG~~f~GHTE~La~~~~-~~-~~Mml~-~~~L~v~~~TtHipLk~V~~~i--t~~~ 162 (304)
T PRK03946 88 VELADSKEVDAICTLPIHKKAWQKAGIPYVGHTDALRDRFK-KN-AIMMLG-CEKLFVALFTDHIPLKKVSQLI--TVKA 162 (304)
T ss_pred HHHHHCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHHH-CC-CEEEEC-CCCEEEEEECCCCCHHHHHHHH--CHHH
T ss_conf 99998399879996754699998589998981699999860-24-323111-6863899856887599999986--8999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEE--E--------CCCCCCCCCHHHHHHHHHHHHCCCCCCC-EECCCCHHHCCC--
Q ss_conf 99999999999998568999658998--4--------0455555657999999997402457132-002345545324--
Q gi|254780498|r 166 MVQLSILGSFFARSVAGINCPSIGLL--N--------VGTEEIKGNDVLQESARLLRGECCGAFK-YKGFIEANDIAK-- 232 (364)
Q Consensus 166 L~qfA~mGs~yak~~~~~~~PrVgLL--N--------iG~E~~KG~~~~kea~~LL~~~~~~~~n-F~GniEg~~i~~-- 232 (364)
+.++-.. +.+. +.+||||++ | +|.||. +++.-.-++++.. .++ |.|.+-++-+|.
T Consensus 163 i~~~i~~---~~~~---~~~prIaV~GLNPHAGE~G~~G~EE~---~Ii~~i~~~~~~~---~~~~~~GP~paDt~F~~~ 230 (304)
T PRK03946 163 LVKFLLD---FYKS---TQFKKVGVLGFNPHAGDEGVLGEEEK---IILKAIKKANQFL---GFEIFFGPLVPDSAFTPN 230 (304)
T ss_pred HHHHHHH---HHHH---CCCCCEEEEEECCCCCCCCCCCCCHH---HHHHHHHHHHHHC---CCCCCCCCCCHHHHHHHH
T ss_conf 9999999---9853---57884599941776300056774134---7699999999966---987133898826888875
Q ss_pred --CCCCEEEECC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCEE-
Q ss_conf --5683899755-127889999888899999999986322208899999989999999972696870874674216148-
Q gi|254780498|r 233 --GFVDVIVTEG-FSGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFDPRNFNGGVLLGVDGLV- 308 (364)
Q Consensus 233 --g~~DVvV~DG-FtGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~~~gGa~llGl~g~v- 308 (364)
++.|++||== =.|=|.+|+. +. ..+=-+-|||.=+.
T Consensus 231 ~~~~~D~vvaMYHDQglip~K~l---------------------------------------~f-~~~vn~TlGLp~iRt 270 (304)
T PRK03946 231 KRKNFNRYVAMYHDQGLAPLKAL---------------------------------------YF-DESINVSLNLPILRT 270 (304)
T ss_pred HHCCCCEEEEECCCCCCHHHHHC---------------------------------------CC-CCCEEEECCCCEEEE
T ss_conf 41579999981524432656522---------------------------------------47-872799528990367
Q ss_pred ---------EEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf ---------983889986899999999999996
Q gi|254780498|r 309 ---------VKGHGSSDAKSIFNVLGIAHNMSQ 332 (364)
Q Consensus 309 ---------ik~HG~s~~~a~~~ai~~a~~~~~ 332 (364)
|-+-|-+|+.++.+||++|.++++
T Consensus 271 SpdHGTa~dIaGkg~A~~~s~~~Ai~~A~~la~ 303 (304)
T PRK03946 271 SVDHGTAFDIAYKNKANTKSYLNAIKYAINLGS 303 (304)
T ss_pred CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 899870566607898996999999999999841
No 36
>TIGR02709 branched_ptb branched-chain phosphotransacylase; InterPro: IPR014081 This entry distinguishes branched-chain phosphotransacylases like that of Enterococcus faecalis from closely related subfamilies of phosphate butyryltransferase 2.3.1.19 from EC, (IPR014079 from INTERPRO) and phosphate acetyltransferase 2.3.1.8 from EC, (IPR004614 from INTERPRO). Members of this family and of IPR014079 from INTERPRO show considerable cross reactivity, and the occurrence of a member of either family proximate to an apparent leucine dehydrogenase will suggest activity on branched chain-acyl-CoA compounds..
Probab=95.91 E-value=0.047 Score=32.85 Aligned_cols=244 Identities=19% Similarity=0.253 Sum_probs=147.5
Q ss_pred EEECCCCCCCCHHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCH
Q ss_conf 997468777817779999999985-7991799978989999998626975155799778520177830679997137642
Q gi|254780498|r 16 SLDLMGGDLGARDLILGASKFLEA-HPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVSIAMDERPADALRRGRNVS 94 (364)
Q Consensus 16 AVDaMGGD~~P~~vi~Ga~~al~~-~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~vI~mde~P~~AlR~kK~~S 94 (364)
.|-.-||-. |+ ++.=...+|++ ..-+.|++|-..|.+.. ++.-..+||++.- +
T Consensus 2 tvsiaGGsq-Pe-ilqlvkkalkeaeqPlqfivfdtnenldt--------enlWkyvhCsdea----------------a 55 (271)
T TIGR02709 2 TVSIAGGSQ-PE-ILQLVKKALKEAEQPLQFIVFDTNENLDT--------ENLWKYVHCSDEA----------------A 55 (271)
T ss_pred EEEECCCCC-HH-HHHHHHHHHHHHCCCEEEEEEECCCCCCH--------HHHHEEEECCCHH----------------H
T ss_conf 676217886-47-99999998763128706899715555451--------2431001103045----------------6
Q ss_pred HHHHHHHHHHCCCCEEEEEEC--CHHHHH---HHHHHHCCCCCCCCCCCHHHCCCCCCCCE-EEEECCCCCCCCHHHHHH
Q ss_conf 799999998549953999706--426788---88875322556763220011055889845-998613277789899999
Q gi|254780498|r 95 SMWRAIEAVKKNQAASVVTAG--NTGALI---AMARLCLSRISGVDRPSLAAFWPTVKGKC-IILDVGATIGSTVSHMVQ 168 (364)
Q Consensus 95 Sm~~a~~lvk~g~aDa~VSaG--nTGA~l---a~a~~~lg~i~Gv~RPala~~~Pt~~g~~-vllD~GAN~d~~~~~L~q 168 (364)
--..|+.+|..|+|+.++- | .|-.++ .-+-+-|+--|=.+..|. +--+.|++ ++-||.-|+-|+--.|.+
T Consensus 56 vaqeavslvatGqaqillk-GiiqthtllkemlksehqlknkPilshvam---velPaGktflltdCamniaPtqatlie 131 (271)
T TIGR02709 56 VAQEAVSLVATGQAQILLK-GIIQTHTLLKEMLKSEHQLKNKPILSHVAM---VELPAGKTFLLTDCAMNIAPTQATLIE 131 (271)
T ss_pred HHHHHHHHHHCCHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCEEEEEE---EECCCCCEEEEHHHHHHCCCCHHHHHH
T ss_conf 7665555432231555667-688888999998643343305750110123---442788642000113212530367788
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEEECCCCCC-CCC--HHHHHHHHHHHHCCCCCCCEECCCC----------HHHC----C
Q ss_conf 999999999985689996589984045555-565--7999999997402457132002345----------5453----2
Q gi|254780498|r 169 LSILGSFFARSVAGINCPSIGLLNVGTEEI-KGN--DVLQESARLLRGECCGAFKYKGFIE----------ANDI----A 231 (364)
Q Consensus 169 fA~mGs~yak~~~~~~~PrVgLLNiG~E~~-KG~--~~~kea~~LL~~~~~~~~nF~GniE----------g~~i----~ 231 (364)
+-.-....++. +|.-+||++||+--+.-+ |=+ -+.||...-..+... -...|..- ++.- .
T Consensus 132 ivenakevaqk-lGlhhPkiallsaaenfnPkmPssvlakevtahfn~qqe--atvfGPlsldlatseeavahkrysGPi 208 (271)
T TIGR02709 132 IVENAKEVAQK-LGLHHPKIALLSAAENFNPKMPSSVLAKEVTAHFNDQQE--ATVFGPLSLDLATSEEAVAHKRYSGPI 208 (271)
T ss_pred HHHHHHHHHHH-HCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC--EEEECCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 88767899987-167664144222234237777546777666754215553--056444000011003445320036873
Q ss_pred CCCCCEEEECCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCEEEE
Q ss_conf 456838997551-2788999988889999999998632220889999998999999997269687087467421614898
Q gi|254780498|r 232 KGFVDVIVTEGF-SGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFDPRNFNGGVLLGVDGLVVK 310 (364)
Q Consensus 232 ~g~~DVvV~DGF-tGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~~~gGa~llGl~g~vik 310 (364)
-|++|++|.--. +||.+-|+.- -|..... |+.+.|-+-+||-
T Consensus 209 mGdadilvvPtidvGnClykslt------------------------------------lfGhakv-GGtivGtkvPvvl 251 (271)
T TIGR02709 209 MGDADILVVPTIDVGNCLYKSLT------------------------------------LFGHAKV-GGTIVGTKVPVVL 251 (271)
T ss_pred CCCCCEEEECCCCHHHHHHHHHH------------------------------------HHCCCCC-CCEEECCCCCEEE
T ss_conf 14655688534101146776665------------------------------------5200000-6556402003788
Q ss_pred ECCCCCHHHHHHHHHHHHH
Q ss_conf 3889986899999999999
Q gi|254780498|r 311 GHGSSDAKSIFNVLGIAHN 329 (364)
Q Consensus 311 ~HG~s~~~a~~~ai~~a~~ 329 (364)
+-.+-+...-.+.+|.|.+
T Consensus 252 tsrsdsteskfhslrfamr 270 (271)
T TIGR02709 252 TSRSDSTESKFHSLRFAMR 270 (271)
T ss_pred EECCCCCHHHHHHHHHHHC
T ss_conf 4056530123544443214
No 37
>TIGR02346 chap_CCT_theta T-complex protein 1, theta subunit; InterPro: IPR012721 Members of this eukaryotic family are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT theta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.; GO: 0005524 ATP binding, 0051082 unfolded protein binding, 0006457 protein folding.
Probab=86.44 E-value=1.2 Score=23.99 Aligned_cols=128 Identities=24% Similarity=0.317 Sum_probs=78.2
Q ss_pred HHHHHHHHH----HC---CCCCCEEEEEECC----CCCCCCCHHHHHHHHHHHHCCCC--CCC-EECCCCHHHCCCCCCC
Q ss_conf 999999998----56---8999658998404----55555657999999997402457--132-0023455453245683
Q gi|254780498|r 171 ILGSFFARS----VA---GINCPSIGLLNVG----TEEIKGNDVLQESARLLRGECCG--AFK-YKGFIEANDIAKGFVD 236 (364)
Q Consensus 171 ~mGs~yak~----~~---~~~~PrVgLLNiG----~E~~KG~~~~kea~~LL~~~~~~--~~n-F~GniEg~~i~~g~~D 236 (364)
++|-++.|. +- ..++|||+-+|=| +=|+|||=+++.|-+||.=+++. .++ + =..|-+.-++
T Consensus 217 ~~GmV~~reaeG~vksls~~~~AKVAVf~CplD~~~TETKGTVLihnA~ELlny~KgEE~~~e~~-----iK~iad~Gv~ 291 (554)
T TIGR02346 217 LKGMVFKREAEGSVKSLSRVKNAKVAVFSCPLDTATTETKGTVLIHNAEELLNYSKGEENQIEAL-----IKAIADSGVK 291 (554)
T ss_pred EECCEECCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCCHHHCCHHHHCCCCCCHHHHHHHH-----HHHHHHCCCE
T ss_conf 85117631788433530213688678871777745665243000124786605570268999998-----7899868985
Q ss_pred EEEECCHHHHHHHHHHHH--------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEE-----EEE
Q ss_conf 899755127889999888--------8999999999863222088999999899999999726968708746-----742
Q gi|254780498|r 237 VIVTEGFSGNIAIKAAEG--------AVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFDPRNFNGGV-----LLG 303 (364)
Q Consensus 237 VvV~DGFtGNi~LKt~EG--------~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~~~gGa~-----llG 303 (364)
|||+-|=+|.++|--+|= .+||=.+-|=+.+..+++-||+.. .|++-|=-= =.|
T Consensus 292 VIv~gG~v~d~AlHy~~~Y~im~~k~~SKFELrRlCk~~gA~~l~rL~~P-------------~PEe~G~vds~~v~EIG 358 (554)
T TIGR02346 292 VIVTGGSVGDMALHYVEKYNIMVLKIPSKFELRRLCKTVGATPLARLGAP-------------QPEELGYVDSVYVSEIG 358 (554)
T ss_pred EEEECCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCC-------------CHHHCCCEEEEEEEEEC
T ss_conf 99946848899998781558269997782658899988077773518345-------------82264420079999985
Q ss_pred ECCEEEEECCCCC
Q ss_conf 1614898388998
Q gi|254780498|r 304 VDGLVVKGHGSSD 316 (364)
Q Consensus 304 l~g~vik~HG~s~ 316 (364)
-.++.|.-|=..|
T Consensus 359 ~~~VTvf~~e~~d 371 (554)
T TIGR02346 359 GQKVTVFKQENGD 371 (554)
T ss_pred CCEEEEEEEECCC
T ss_conf 8488999730377
No 38
>pfam10941 DUF2620 Protein of unknown function DUF2620. This is a bacterial family of proteins with unknown function.
Probab=84.18 E-value=0.96 Score=24.57 Aligned_cols=72 Identities=26% Similarity=0.263 Sum_probs=45.6
Q ss_pred EEEEEC--CHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCHHH--
Q ss_conf 799978--9899999986269751557997785201778306799971376427999999985499539997064267--
Q gi|254780498|r 44 RFLMYG--DAKVCLPILDSHPLLKERSCFHHCEVSIAMDERPADALRRGRNVSSMWRAIEAVKKNQAASVVTAGNTGA-- 119 (364)
Q Consensus 44 ~iiLvG--dee~I~~~l~~~~~~~~ri~Ii~a~~vI~mde~P~~AlR~kK~~SSm~~a~~lvk~g~aDa~VSaGnTGA-- 119 (364)
+|.+-| +++++++.+.+... +.+++. |. |=..|.+.||.|++|=.+-|.|||+
T Consensus 2 kivIgGql~K~~i~~~i~~~~~--~~~ev~-----i~----------------sDmdAAM~vK~G~aDYYiGACnTGgGg 58 (117)
T pfam10941 2 RIVIGGQLQKEEIAELIEETAG--GAVEVT-----IK----------------SDLDAAMAVKNGKADYYIGACNTGAGG 58 (117)
T ss_pred EEEECCCCCHHHHHHHHHHHCC--CCEEEE-----EC----------------CHHHHHHHHHCCCCCEEEEECCCCCCH
T ss_conf 1888472259999999998689--836999-----70----------------509999887669967666644789619
Q ss_pred HHHHHHHHCCCC--CCCCCCC
Q ss_conf 888887532255--6763220
Q gi|254780498|r 120 LIAMARLCLSRI--SGVDRPS 138 (364)
Q Consensus 120 ~la~a~~~lg~i--~Gv~RPa 138 (364)
.++.+.-+||.- --|.+|.
T Consensus 59 ALamAIallG~~~C~Tvs~pg 79 (117)
T pfam10941 59 ALAMAIAILGKDKCATIAMPG 79 (117)
T ss_pred HHHHHHHHHCCCCEEEEECCC
T ss_conf 999999994846357855699
No 39
>pfam06506 PrpR_N Propionate catabolism activator. This domain is found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate.
Probab=81.67 E-value=4.1 Score=20.58 Aligned_cols=139 Identities=19% Similarity=0.227 Sum_probs=80.9
Q ss_pred HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
Q ss_conf 99999998549953999706426788888753225567632200110558898459986132777898999999999999
Q gi|254780498|r 96 MWRAIEAVKKNQAASVVTAGNTGALIAMARLCLSRISGVDRPSLAAFWPTVKGKCIILDVGATIGSTVSHMVQLSILGSF 175 (364)
Q Consensus 96 m~~a~~lvk~g~aDa~VSaGnTGA~la~a~~~lg~i~Gv~RPala~~~Pt~~g~~vllD~GAN~d~~~~~L~qfA~mGs~ 175 (364)
+-.|-+++++ .+|.++|.|.|+.++.-.. +-|-+ .+.++..++++-= .
T Consensus 22 v~~a~~~~~~-g~dvIIsRGgta~~ir~~~---------~iPVv------------------~I~~s~~Dil~al----~ 69 (169)
T pfam06506 22 VEVARALVAE-GVDVIISRGGTAAYLRDRL---------SVPVV------------------EIKVSGFDLLRAL----A 69 (169)
T ss_pred HHHHHHHHHC-CCCEEEECCHHHHHHHHHC---------CCCEE------------------EEECCHHHHHHHH----H
T ss_conf 9999999977-9959998965899999858---------99889------------------9827886999999----9
Q ss_pred HHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHCC-------CCCCCEEEECCHHHHHH
Q ss_conf 99985689996589984045555565799999999740245713200234554532-------45683899755127889
Q gi|254780498|r 176 FARSVAGINCPSIGLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFIEANDIA-------KGFVDVIVTEGFSGNIA 248 (364)
Q Consensus 176 yak~~~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~~i~-------~g~~DVvV~DGFtGNi~ 248 (364)
.++. .++|||+.+.+.- .+ -.+.--++|.- ++.+.-+....|+. ..-+||||+|+.+-+.+
T Consensus 70 ~a~~----~~~kiavvg~~~~-~~---~~~~~~~il~~----~i~~~~~~~~~e~~~~i~~l~~~G~~vvVG~~~~~~~A 137 (169)
T pfam06506 70 RARR----YGGRIGLVGYENI-IP---GLKALSELLGL----DIVQRAYQSEEEARAAVKELKAQGIKVIVGDGLVCDLA 137 (169)
T ss_pred HHHH----HCCCEEEEECCCC-CH---HHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHHCCCEEEECCCHHHHHH
T ss_conf 9997----5897999927630-36---89999999699----35999966889999999999986995998582899999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 99988889999999998632220889999998999999997269687087467421614898388998689999999999
Q gi|254780498|r 249 IKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFDPRNFNGGVLLGVDGLVVKGHGSSDAKSIFNVLGIAH 328 (364)
Q Consensus 249 LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~~~gGa~llGl~g~vik~HG~s~~~a~~~ai~~a~ 328 (364)
-| +|++++.+ .|+..++..|+..|.
T Consensus 138 ~~---------------------------------------------------~Gl~~vli----~sg~eSI~~A~~eA~ 162 (169)
T pfam06506 138 EQ---------------------------------------------------AGLQGVLI----YSGKESVREAFEEAL 162 (169)
T ss_pred HH---------------------------------------------------CCCCEEEE----ECCHHHHHHHHHHHH
T ss_conf 98---------------------------------------------------39957999----667899999999999
Q ss_pred HHHHC
Q ss_conf 99960
Q gi|254780498|r 329 NMSQN 333 (364)
Q Consensus 329 ~~~~~ 333 (364)
++++.
T Consensus 163 ~l~~~ 167 (169)
T pfam06506 163 ELARA 167 (169)
T ss_pred HHHHH
T ss_conf 99974
No 40
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=71.19 E-value=8 Score=18.76 Aligned_cols=115 Identities=19% Similarity=0.323 Sum_probs=59.2
Q ss_pred CCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 95399970642678888875322556763220011055889845998613277789899999999999999985689996
Q gi|254780498|r 107 QAASVVTAGNTGALIAMARLCLSRISGVDRPSLAAFWPTVKGKCIILDVGATIGSTVSHMVQLSILGSFFARSVAGINCP 186 (364)
Q Consensus 107 ~aDa~VSaGnTGA~la~a~~~lg~i~Gv~RPala~~~Pt~~g~~vllD~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~P 186 (364)
..| ++..|-+|.- ++ -|.++-.+-......+.+|||.|...+.....+ .+ ..+.+.+.. .+|
T Consensus 31 g~~-viNlG~sG~g---------~l----e~~~a~~i~~~~a~~~vi~~g~N~~~~~~~~~~--~~-~~~V~~ir~-~~p 92 (177)
T cd01844 31 GLE-VINLGFSGNA---------RL----EPEVAELLRDVPADLYIIDCGPNIVGAEAMVRE--RL-GPLVKGLRE-THP 92 (177)
T ss_pred CCC-EEECCCCCCC---------CC----CHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHH--HH-HHHHHHHHH-HCC
T ss_conf 997-7714667543---------10----288999986189988999634678874789999--99-999999998-788
Q ss_pred EEEEEECC------CCCCCC--------CHHHHHHHHHHHHCCCCCCCEECCCCHHHCCCCCCCEEEECCH
Q ss_conf 58998404------555556--------5799999999740245713200234554532456838997551
Q gi|254780498|r 187 SIGLLNVG------TEEIKG--------NDVLQESARLLRGECCGAFKYKGFIEANDIAKGFVDVIVTEGF 243 (364)
Q Consensus 187 rVgLLNiG------~E~~KG--------~~~~kea~~LL~~~~~~~~nF~GniEg~~i~~g~~DVvV~DGF 243 (364)
..-++=+. .+...+ ++..++++..|++....++ -|+++.+++....+ .-.||-
T Consensus 93 ~tPIvlv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~l---~~ldg~~l~g~~~~-~~~Dgi 159 (177)
T cd01844 93 DTPILLVSPRYCPDAELTPGRGKLTLAVRRALREAFEKLRADGVPNL---YYLDGEELLGPDGE-ALVDGI 159 (177)
T ss_pred CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE---EEECCCCCCCCCCC-CCCCCC
T ss_conf 99789983367764446875278899999999999999997699987---99465120688767-787878
No 41
>cd03334 Fab1_TCP TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this domain leads to loss of catalytic activity. However no exact function this domain has been defined. In general, chaperonins are involved in productive folding of proteins.
Probab=70.63 E-value=5.4 Score=19.84 Aligned_cols=68 Identities=24% Similarity=0.109 Sum_probs=43.5
Q ss_pred CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHCCCCCCCEEEECCHHHHHHHHHHH
Q ss_conf 6899965899840455555657999999997402457132002345545324568389975512788999988
Q gi|254780498|r 181 AGINCPSIGLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFIEANDIAKGFVDVIVTEGFSGNIAIKAAE 253 (364)
Q Consensus 181 ~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~~i~~g~~DVvV~DGFtGNi~LKt~E 253 (364)
..++||||+||+.+-|-.|...-.....+++++.. .|+-+ --..|..-.+|||+|-+=...+++....
T Consensus 82 ~~i~npkIlll~~~Le~~k~e~~~~~~~~~~~qE~----~~l~~-~v~~I~~~g~nVVl~~k~I~d~A~~~l~ 149 (261)
T cd03334 82 SKIKNPRILLLQGPLEYQRVENKLLSLDPVILQEK----EYLKN-LVSRIVALRPDVILVEKSVSRIAQDLLL 149 (261)
T ss_pred CCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH----HHHHH-HHHHHHHHCCCEEEECCCCCHHHHHHHH
T ss_conf 72558659998054244414344530999999999----99999-9999996099999988977989999999
No 42
>KOG1731 consensus
Probab=69.08 E-value=8.3 Score=18.66 Aligned_cols=168 Identities=13% Similarity=0.098 Sum_probs=104.0
Q ss_pred ECCHHHHHHHHHHCCCCCCCEEEEC-CCCC-------CCCCCHHHHHHHHCCCCHHHHH----------HHHHHHCCCCE
Q ss_conf 7898999999862697515579977-8520-------1778306799971376427999----------99998549953
Q gi|254780498|r 48 YGDAKVCLPILDSHPLLKERSCFHH-CEVS-------IAMDERPADALRRGRNVSSMWR----------AIEAVKKNQAA 109 (364)
Q Consensus 48 vGdee~I~~~l~~~~~~~~ri~Ii~-a~~v-------I~mde~P~~AlR~kK~~SSm~~----------a~~lvk~g~aD 109 (364)
.-+...+..+-+..+-..+.+.|+. +++. +.|-..+...+|..++ +++.. ..-+-++|+++
T Consensus 171 l~~~~~~~~l~~~~~~~~~yvAiv~e~~~s~lg~~~~l~~l~~~~v~vr~~~d-~q~~~~~~l~~~~~~~~llfrnG~~q 249 (606)
T KOG1731 171 LKDTTTLEELDEGISTTANYVAIVFETEPSDLGWANLLNDLPSKQVGVRARLD-TQNFPLFGLKPDNFPLALLFRNGEQQ 249 (606)
T ss_pred CCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCEEEEEC-CHHCCCCCCCCCCCHHHHHHCCCCCC
T ss_conf 88864298875035661101689982377400788987634577740588862-02154324577875034443378611
Q ss_pred EEEEECCHH-HHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf 999706426-7888887532255676322001105588984599861327778989999999999999998568999658
Q gi|254780498|r 110 SVVTAGNTG-ALIAMARLCLSRISGVDRPSLAAFWPTVKGKCIILDVGATIGSTVSHMVQLSILGSFFARSVAGINCPSI 188 (364)
Q Consensus 110 a~VSaGnTG-A~la~a~~~lg~i~Gv~RPala~~~Pt~~g~~vllD~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrV 188 (364)
.+--++.+. +++..--..||...--.+|++.++.++...+++ |+=- --|++.+-++-|=|=++... ++-+|-||+
T Consensus 250 ~l~~~~~s~~~y~~~I~~~lg~~~~a~~pt~~p~~~~~~~~~I--d~~~-~~l~~~~~V~~aDLeqAm~~-~L~~Ev~R~ 325 (606)
T KOG1731 250 PLWPSSSSRSAYVKKIDDLLGDKNEASGPTLHPITATTAAPTI--DAPS-EVLNNQYFVYEADLEQAMSY-ILHIEVPRT 325 (606)
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH--HCCH-HHCCCCCEEEHHHHHHHHHH-HHHHHHCCH
T ss_conf 1353445478899999998568533678876853223445023--2320-11376000207669999999-999863122
Q ss_pred EEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHCC
Q ss_conf 9984045555565799999999740245713200234554532
Q gi|254780498|r 189 GLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFIEANDIA 231 (364)
Q Consensus 189 gLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~~i~ 231 (364)
+++. +---...|+=-.+|+.. |.|+-++++++
T Consensus 326 ~~i~-----g~~l~aLk~f~~ll~r~------~P~~~~~~~l~ 357 (606)
T KOG1731 326 ALIR-----GENLAALKEFMHLLRRY------FPGTADGRRLV 357 (606)
T ss_pred HHCC-----CCHHHHHHHHHHHHHHH------CCCCHHHHHHH
T ss_conf 3306-----75378899999999985------87871678899
No 43
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; InterPro: IPR006009 The murG gene of Escherichia coli encodes the N-acetylglucosaminyltransferase, UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase, responsible for the final step in the formation of the lipid-linked disaccharide-pentapeptide subunit of peptidoglycan. The enzyme is peripherally associated with the inner face of the cytoplasmic membrane. Therefore, the peptidoglycan subunit is completely assembled before it traverses the cytoplasmic membrane .; GO: 0050511 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity, 0019277 UDP-N-acetylgalactosamine biosynthetic process, 0009276 1-2nm peptidoglycan-based cell wall.
Probab=65.51 E-value=11 Score=18.03 Aligned_cols=191 Identities=17% Similarity=0.092 Sum_probs=101.4
Q ss_pred CCCCEEEEEEECCCCCCCCHHHHHHHHHHHH-HCCCCEEEEECCHHHHHHHHHH--CCCCCCCEEEECCCCCC-----CC
Q ss_conf 3898239999746877781777999999998-5799179997898999999862--69751557997785201-----77
Q gi|254780498|r 8 QGGNVDTISLDLMGGDLGARDLILGASKFLE-AHPRIRFLMYGDAKVCLPILDS--HPLLKERSCFHHCEVSI-----AM 79 (364)
Q Consensus 8 ~~~~m~kIAVDaMGGD~~P~~vi~Ga~~al~-~~~~i~iiLvGdee~I~~~l~~--~~~~~~ri~Ii~a~~vI-----~m 79 (364)
++++|++|++ |||--|=--.-.++...|. +.|.+++++.|.++-++..+-. ..+. +.-|++.... .+
T Consensus 1 ~~~~~~~~~~--~gGGTGG~fPAlA~a~~l~~~~~~~~v~~lG~~~g~e~~lv~~~~~~~---~~~i~~~gl~~~~~~~~ 75 (368)
T TIGR01133 1 MMNKMKKVAL--AGGGTGGIFPALAVAEELIKRGPEVEVVWLGTKRGLEERLVPSKEGIE---FLTIPVGGLRRKGSKKL 75 (368)
T ss_pred CCCCCEEEEE--ECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCE---EEEEEECCCCCCCCHHH
T ss_conf 9988228999--727830268999999999974893699985067750000343215741---77774010036551014
Q ss_pred CCHHH-HHHHHCCCCHHHHHHHHHHHCCCCEEEEEEC--CHHHH-HHHHHHH-CCCC-CCCCCCCHHHCCCCCCCCEE--
Q ss_conf 83067-9997137642799999998549953999706--42678-8888753-2255-67632200110558898459--
Q gi|254780498|r 80 DERPA-DALRRGRNVSSMWRAIEAVKKNQAASVVTAG--NTGAL-IAMARLC-LSRI-SGVDRPSLAAFWPTVKGKCI-- 151 (364)
Q Consensus 80 de~P~-~AlR~kK~~SSm~~a~~lvk~g~aDa~VSaG--nTGA~-la~a~~~-lg~i-~Gv~RPala~~~Pt~~g~~v-- 151 (364)
--.|. ..+ .+.+.+.+.+|+=+.|++|+.| .++-. +|+...- +..+ +-=.+|+++.=|-++--+.|
T Consensus 76 ~~~~~~~~~------~~~~~a~~~l~~~~p~~v~G~GGY~s~P~~~AA~l~g~iP~~~EQN~~pG~~Nk~ls~~A~~V~~ 149 (368)
T TIGR01133 76 LKLPLLKLL------KAVLQARRILKKFKPDVVVGFGGYVSGPAGLAAKLLGRIPLILEQNAVPGLTNKLLSRFAKRVLV 149 (368)
T ss_pred HHHHHHHHH------HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCEEEE
T ss_conf 678899999------99999999986008747987473678999999876679948986154125788887887443111
Q ss_pred -EEE------------CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE--CCCCCCCCCHHHHHHHHHHHHC
Q ss_conf -986------------13277789899999999999999985689996589984--0455555657999999997402
Q gi|254780498|r 152 -ILD------------VGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLLN--VGTEEIKGNDVLQESARLLRGE 214 (364)
Q Consensus 152 -llD------------~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLLN--iG~E~~KG~~~~kea~~LL~~~ 214 (364)
+=+ +..|+.. +.+.++..- ..+.+.-..-..|+|=.+= =|.+. =|+.+.++...|.+.
T Consensus 150 ~f~~~~~~~~~~~~~~~~g~pvr--~~~~~~~~~-~~~~~~~~~~~~~~ilv~GGSQGA~~--lN~~vp~~~~~L~~~ 222 (368)
T TIGR01133 150 SFPGAKKFFPAAEKVVVVGNPVR--EEIRSLPAA-RARKRFKLRPGKLRILVLGGSQGAKI--LNELVPKALAKLAEK 222 (368)
T ss_pred ECHHHHCCCCCCCCEEEECCHHH--HHHHCCCCH-HHHHHHCCCCCCCEEEEECCCHHHHH--HHHHHHHHHHHHHHC
T ss_conf 05133226766675687014134--543037825-68886216899827999627376899--999999999886401
No 44
>KOG3857 consensus
Probab=64.70 E-value=11 Score=17.93 Aligned_cols=88 Identities=17% Similarity=0.159 Sum_probs=51.5
Q ss_pred CEEEEEEECCC--CCCCCHHHHHHHHHHHHHCCCC-EEEEECCHH--------HHHHHHHHCCCCCCCEEEECCCCCCCC
Q ss_conf 82399997468--7778177799999999857991-799978989--------999998626975155799778520177
Q gi|254780498|r 11 NVDTISLDLMG--GDLGARDLILGASKFLEAHPRI-RFLMYGDAK--------VCLPILDSHPLLKERSCFHHCEVSIAM 79 (364)
Q Consensus 11 ~m~kIAVDaMG--GD~~P~~vi~Ga~~al~~~~~i-~iiLvGdee--------~I~~~l~~~~~~~~ri~Ii~a~~vI~m 79 (364)
+||-.+.-.-- --+|+.+..|-... + +|.+. +.+|+-|+. ..++.|++.++. +++.|-.++
T Consensus 38 k~~~~af~m~~s~~rfG~gv~~Evg~d-i-kn~gaKk~llvTDkni~~~~~~~~a~~~L~~~~I~---~~vyD~v~~--- 109 (465)
T KOG3857 38 KMMSVAFFMIPSTSRFGKGVLAEVGDD-I-KNLGAKKTLLVTDKNIAKLGLVKVAQDSLEENGIN---VEVYDKVQP--- 109 (465)
T ss_pred CCCEEEEEECCCHHHHCCHHHHHHHHH-H-HHCCCCCEEEEECCCHHHCCCHHHHHHHHHHCCCC---EEEECCCCC---
T ss_conf 643135786151332061168999999-8-71574425896077744414178999999975981---697247647---
Q ss_pred CCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf 8306799971376427999999985499539997064
Q gi|254780498|r 80 DERPADALRRGRNVSSMWRAIEAVKKNQAASVVTAGN 116 (364)
Q Consensus 80 de~P~~AlR~kK~~SSm~~a~~lvk~g~aDa~VSaGn 116 (364)
. ...+|||.|++.+|+++.|+|||-|-
T Consensus 110 ---------e-Ptv~s~~~alefak~~~fDs~vaiGG 136 (465)
T KOG3857 110 ---------E-PTVGSVTAALEFAKKKNFDSFVAIGG 136 (465)
T ss_pred ---------C-CCHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf ---------9-86234999999987336655898768
No 45
>KOG4797 consensus
Probab=61.81 E-value=9.7 Score=18.24 Aligned_cols=44 Identities=14% Similarity=0.317 Sum_probs=35.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89986899999999999996070689999999998767522233
Q gi|254780498|r 313 GSSDAKSIFNVLGIAHNMSQNGFIDMVKDDMQRVRDSLLDVHEK 356 (364)
Q Consensus 313 G~s~~~a~~~ai~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 356 (364)
++.+..+|-|-|.+|.++|+..+.-.++++++-+++.+-|..+.
T Consensus 39 ~~~~VvaIDNKIeQAMDLVKtHLmfAVREEVe~Lk~qI~eL~er 82 (123)
T KOG4797 39 SSGSVVAIDNKIEQAMDLVKTHLMFAVREEVEVLKEQIRELEER 82 (123)
T ss_pred CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88866752148999999999999999999999999999999999
No 46
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=60.49 E-value=13 Score=17.45 Aligned_cols=30 Identities=3% Similarity=0.112 Sum_probs=10.3
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf 9899999999999999985689996589984
Q gi|254780498|r 162 TVSHMVQLSILGSFFARSVAGINCPSIGLLN 192 (364)
Q Consensus 162 ~~~~L~qfA~mGs~yak~~~~~~~PrVgLLN 192 (364)
+|+.-.+|..+...+.+. .+...-.++.|.
T Consensus 12 ~p~a~~~~~~la~~l~~~-~~~~~v~~~fle 41 (117)
T cd03414 12 DPDANADVAKIARLLEEG-TGFARVETAFAA 41 (117)
T ss_pred CHHHHHHHHHHHHHHHHH-CCCCEEEEEEEC
T ss_conf 878999999999999976-899818887753
No 47
>cd01463 vWA_VGCC_like VWA Voltage gated Calcium channel like: Voltage-gated calcium channels are a complex of five proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The alpha 2 and delta subunits result from proteolytic processing of a single gene product and carries at its N-terminus the VWA and cache domains, The alpha 2 delta gene family has orthologues in D. melanogaster and C. elegans but none have been detected in aither A. thaliana or yeast. The exact biochemical function of the VWA domain is not known but the alpha 2 delta complex has been shown to regulate various functional properties of the channel complex.
Probab=59.33 E-value=14 Score=17.33 Aligned_cols=39 Identities=18% Similarity=0.200 Sum_probs=14.3
Q ss_pred EEEEEEECCCCCCC--CHHHHHHHHHHHHH---CCCCEEEEECC
Q ss_conf 23999974687778--17779999999985---79917999789
Q gi|254780498|r 12 VDTISLDLMGGDLG--ARDLILGASKFLEA---HPRIRFLMYGD 50 (364)
Q Consensus 12 m~kIAVDaMGGD~~--P~~vi~Ga~~al~~---~~~i~iiLvGd 50 (364)
=+-+.||.=|.=.| -..+-+++...++. +..+.++.|++
T Consensus 15 dvv~vlD~SGSM~g~kl~~ak~a~~~il~~L~~~D~~~iv~Fs~ 58 (190)
T cd01463 15 DIVILLDVSGSMTGQRLHLAKQTVSSILDTLSDNDFFNIITFSN 58 (190)
T ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECC
T ss_conf 69999979998897349999999999998199877999999689
No 48
>COG0303 MoeA Molybdopterin biosynthesis enzyme [Coenzyme metabolism]
Probab=56.61 E-value=10 Score=18.11 Aligned_cols=103 Identities=22% Similarity=0.279 Sum_probs=61.4
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHH----------HHHHHHHHCCCCCC
Q ss_conf 59986132777898999999999999999856899965899840455555657999----------99999740245713
Q gi|254780498|r 150 CIILDVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLLNVGTEEIKGNDVLQ----------ESARLLRGECCGAF 219 (364)
Q Consensus 150 ~vllD~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLLNiG~E~~KG~~~~k----------ea~~LL~~~~~~~~ 219 (364)
-+++..| ..-+|.++.=.|-.|..- +-=..+||||+++.|.|--...+-.+ --+.+|++... ..
T Consensus 146 ~vil~~G--~~L~p~~i~llas~Gi~~---V~V~rkprV~IisTGdELv~~~~~l~~gqI~dsN~~~l~a~l~~~G~-e~ 219 (404)
T COG0303 146 DVILRAG--TRLTPAEIALLASLGIAE---VKVYRKPRVAIISTGDELVEPGQPLEPGQIYDSNSYMLAALLERAGG-EV 219 (404)
T ss_pred CEEECCC--CCCCHHHHHHHHHCCCCE---EEEECCCEEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCC-CE
T ss_conf 8953488--792799999998689755---78733888999905854558888899985873679999999997599-24
Q ss_pred CEECCCCH-----HHCCC---CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 20023455-----45324---568389975512788999988889999999998
Q gi|254780498|r 220 KYKGFIEA-----NDIAK---GFVDVIVTEGFSGNIAIKAAEGAVRHISGVLQK 265 (364)
Q Consensus 220 nF~GniEg-----~~i~~---g~~DVvV~DGFtGNi~LKt~EG~~~~~~~~lk~ 265 (364)
.|.|-+.- ++.+. ..+||||+-|=+. =|-..++...+++
T Consensus 220 ~~~giv~Dd~~~l~~~i~~a~~~~DviItsGG~S-------vG~~D~v~~~l~~ 266 (404)
T COG0303 220 VDLGIVPDDPEALREAIEKALSEADVIITSGGVS-------VGDADYVKAALER 266 (404)
T ss_pred EECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCC-------CCCHHHHHHHHHH
T ss_conf 5335359998999999997752499999969866-------7614669999984
No 49
>PRK00923 sirohydrochlorin cobaltochelatase; Reviewed
Probab=54.20 E-value=16 Score=16.80 Aligned_cols=12 Identities=25% Similarity=0.401 Sum_probs=3.7
Q ss_pred CCHHHHHHHHHH
Q ss_conf 657999999997
Q gi|254780498|r 200 GNDVLQESARLL 211 (364)
Q Consensus 200 G~~~~kea~~LL 211 (364)
+++.+++-.+.|
T Consensus 18 ~~~~~~~~a~~l 29 (130)
T PRK00923 18 NKEVVTEIAEKI 29 (130)
T ss_pred HHHHHHHHHHHH
T ss_conf 899999999999
No 50
>COG4518 Mu-like prophage FluMu protein gp41 [Function unknown]
Probab=54.11 E-value=6.3 Score=19.43 Aligned_cols=39 Identities=21% Similarity=0.254 Sum_probs=28.7
Q ss_pred CCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHH
Q ss_conf 996589984045555565799999999740245713200234554
Q gi|254780498|r 184 NCPSIGLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFIEAN 228 (364)
Q Consensus 184 ~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~ 228 (364)
..-||..+|.|.--.- .-++--++||+. +|.|+|||+|-
T Consensus 38 aaEriv~tn~gp~~~a--Sp~l~G~eLLrR----Qia~vG~i~GP 76 (122)
T COG4518 38 AAERIVITNGGPHAYA--SPVLMGMELLRR----QIAFVGNIQGP 76 (122)
T ss_pred HHHHEEEECCCCCEEC--CHHHHHHHHHHH----HHHHHHCCCCC
T ss_conf 6646043089960232--758878999999----99987157788
No 51
>cd00128 XPG Xeroderma pigmentosum G N- and I-regions (XPGN, XPGI); contains the HhH2 motif; domain in nucleases. XPG is a eukaryotic enzyme that functions in nucleotide-excision repair and transcription-coupled repair of oxidative DNA damage. Functionally/structurally related to FEN-1; divalent metal ion-dependent exo- and endonuclease, and bacterial and bacteriophage 5'3' exonucleases.
Probab=48.31 E-value=20 Score=16.21 Aligned_cols=87 Identities=21% Similarity=0.290 Sum_probs=53.4
Q ss_pred HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCEEEEE---CCCCCCCCHHHHHHHHHH-
Q ss_conf 9999998549953999706426788888753225567632200110558898459986---132777898999999999-
Q gi|254780498|r 97 WRAIEAVKKNQAASVVTAGNTGALIAMARLCLSRISGVDRPSLAAFWPTVKGKCIILD---VGATIGSTVSHMVQLSIL- 172 (364)
Q Consensus 97 ~~a~~lvk~g~aDa~VSaGnTGA~la~a~~~lg~i~Gv~RPala~~~Pt~~g~~vllD---~GAN~d~~~~~L~qfA~m- 172 (364)
..|+.|++.|.+|+++| ..+=+++-++..++..+.-- ........| +=-...-+.+++++|++|
T Consensus 153 AqcA~L~k~g~vd~v~S-eDsD~l~fGa~~vlr~l~~~-----------~~~~~~~~~~~~i~~~l~l~~~~~id~~iL~ 220 (316)
T cd00128 153 AQCAYLAKKGLVDAIIT-EDSDLLLFGAPRVYRNLFDS-----------GAKPVEEIDLEKILKELGLTREKLIDLAILL 220 (316)
T ss_pred HHHHHHHHCCCEEEEEE-CCCHHHHCCCCEEEEECCCC-----------CCCCEEEEEHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 99999997798589996-56114532887788614546-----------8987699888997877399999999999972
Q ss_pred HHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHC
Q ss_conf 999999856899965899840455555657999999997402
Q gi|254780498|r 173 GSFFARSVAGINCPSIGLLNVGTEEIKGNDVLQESARLLRGE 214 (364)
Q Consensus 173 Gs~yak~~~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~ 214 (364)
|+-|.. ++ |.|| .+.|++|+++.
T Consensus 221 G~Dy~~---gi--~giG--------------~k~A~kli~~~ 243 (316)
T cd00128 221 GCDYTE---GI--PGIG--------------PVTALKLIKKY 243 (316)
T ss_pred CCCCCC---CC--CCCC--------------HHHHHHHHHHH
T ss_conf 988789---99--9735--------------99999999991
No 52
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=46.79 E-value=21 Score=16.10 Aligned_cols=30 Identities=33% Similarity=0.377 Sum_probs=16.8
Q ss_pred HHHHHHH---HHHCCCCEEEEEECCHHHHHHHH
Q ss_conf 7999999---98549953999706426788888
Q gi|254780498|r 95 SMWRAIE---AVKKNQAASVVTAGNTGALIAMA 124 (364)
Q Consensus 95 Sm~~a~~---lvk~g~aDa~VSaGnTGA~la~a 124 (364)
+|....+ .++.|..=.=-|+||||--+|..
T Consensus 48 ~mI~~Ae~~G~l~pG~tIVE~TSGNTGIaLA~v 80 (300)
T COG0031 48 YMIEDAEKRGLLKPGGTIVEATSGNTGIALAMV 80 (300)
T ss_pred HHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHH
T ss_conf 999999984987999989970897279999999
No 53
>KOG0117 consensus
Probab=46.22 E-value=22 Score=16.01 Aligned_cols=18 Identities=11% Similarity=0.272 Sum_probs=7.0
Q ss_pred HHHHHHHHHHCCCCEEEE
Q ss_conf 799999998549953999
Q gi|254780498|r 95 SMWRAIEAVKKNQAASVV 112 (364)
Q Consensus 95 Sm~~a~~lvk~g~aDa~V 112 (364)
-|...+.-|-+|-.|..|
T Consensus 180 eIlee~~kVteGVvdViv 197 (506)
T KOG0117 180 EILEEMKKVTEGVVDVIV 197 (506)
T ss_pred HHHHHHHHHCCCEEEEEE
T ss_conf 999999861787468997
No 54
>pfam09338 Gly_reductase Glycine/sarcosine/betaine reductase component B subunits. This is a family of glycine reductase, sarcosine reductase and betaine reductases. These enzymes catalyse the following reactions. sarcosine reductase: Acetyl phosphate + methylamine + thioredoxin disulphide = N-methylglycine + phosphate + thioredoxin Acetyl phosphate + NH(3) + thioredoxin disulphide = glycine + phosphate + thioredoxin. betaine reductase: Acetyl phosphate + trimethylamine + thioredoxin disulphide = N,N,N-trimethylglycine + phosphate + thioredoxin.
Probab=44.56 E-value=23 Score=15.85 Aligned_cols=32 Identities=28% Similarity=0.492 Sum_probs=17.8
Q ss_pred EEEEECCEEEEE--CCCCCHHHHHHHHHHHHHHH
Q ss_conf 674216148983--88998689999999999999
Q gi|254780498|r 300 VLLGVDGLVVKG--HGSSDAKSIFNVLGIAHNMS 331 (364)
Q Consensus 300 ~llGl~g~vik~--HG~s~~~a~~~ai~~a~~~~ 331 (364)
-.||++|++|-- -|+.|.--++|....-..-+
T Consensus 300 ~~LgaDgvIvseEG~GNPD~Dl~m~~~k~E~~GI 333 (428)
T pfam09338 300 EMLGADGVIVSEEGFGNPDADLMMNCRKLEEKGI 333 (428)
T ss_pred HHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 9859978999435588942789999999998699
No 55
>pfam01728 FtsJ FtsJ-like methyltransferase. This family consists of FtsJ from various bacterial and archaeal sources FtsJ is a methyltransferase, but actually has no effect on cell division. FtsJ's substrate is the 23S rRNA. The 1.5 A crystal structure of FtsJ in complex with its cofactor S-adenosylmethionine revealed that FtsJ has a methyltransferase fold. This family also includes the N terminus of flaviviral NS5 protein. It has been hypothesized that the N-terminal domain of NS5 is a methyltransferase involved in viral RNA capping.
Probab=43.57 E-value=6.3 Score=19.42 Aligned_cols=72 Identities=25% Similarity=0.372 Sum_probs=35.1
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC----CCCCCCCCHHHHHHHHHHHHCCCCCCCEECCC
Q ss_conf 59986132777898999999999999999856899965899840----45555565799999999740245713200234
Q gi|254780498|r 150 CIILDVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLLNV----GTEEIKGNDVLQESARLLRGECCGAFKYKGFI 225 (364)
Q Consensus 150 ~vllD~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLLNi----G~E~~KG~~~~kea~~LL~~~~~~~~nF~Gni 225 (364)
..++|+|+-|--=.+.+.+...-+ .+.+++ |+.+ +..-.+|+-...++...+++
T Consensus 23 ~~vlDLg~aPGgwsq~~~~~~~~~-----~v~~vD-----l~~~~~~~~~~~i~gDi~~~~~~~~i~~------------ 80 (176)
T pfam01728 23 KTVLDLGAAPGGFSQVLLERGAKG-----RVVAVD-----LGPMKPIQGVTFLRGDITDPETLEKLLE------------ 80 (176)
T ss_pred CEEEEECCCCCHHHHHHHHHCCCC-----EEEEEE-----CCCCCCCCCCEEECCCCCCHHHHHHHHH------------
T ss_conf 999996899976999999856687-----399997-----3446567784565167668789999999------------
Q ss_pred CHHHCCCCCCCEEEECC---HHHHH
Q ss_conf 55453245683899755---12788
Q gi|254780498|r 226 EANDIAKGFVDVIVTEG---FSGNI 247 (364)
Q Consensus 226 Eg~~i~~g~~DVvV~DG---FtGNi 247 (364)
.+.+.+|+|+||| ++||-
T Consensus 81 ----~~~~~~DlV~sD~a~~~~g~~ 101 (176)
T pfam01728 81 ----LLPGKVDLVLCDGAPNVSGLE 101 (176)
T ss_pred ----HCCCCCCEEEECCCCCCCCCC
T ss_conf ----739984689733665656773
No 56
>KOG1099 consensus
Probab=43.54 E-value=12 Score=17.67 Aligned_cols=16 Identities=31% Similarity=0.322 Sum_probs=8.2
Q ss_pred HHHHCCCCEEEEEECC
Q ss_conf 9985499539997064
Q gi|254780498|r 101 EAVKKNQAASVVTAGN 116 (364)
Q Consensus 101 ~lvk~g~aDa~VSaGn 116 (364)
+....-+||-+||-|-
T Consensus 109 ~hfggekAdlVvcDGA 124 (294)
T KOG1099 109 EHFGGEKADLVVCDGA 124 (294)
T ss_pred HHHCCCCCCEEEECCC
T ss_conf 9857997667884799
No 57
>TIGR03675 arCOG00543 arCOG01782 universal archaeal KH-domain/beta-lactamase-domain protein. This family of proteins is universal in the archaea and consistsof an N-terminal type-1 KH-domain (pfam00013) a central beta-lactamase-domain (pfam00753) with a C-terminal motif associated with RNA metabolism (pfam07521). KH-domains are associated with RNA-binding, so taken together, this protein is a likely metal-dependent RNAase. This family was defined in as arCOG01782.
Probab=41.66 E-value=16 Score=16.79 Aligned_cols=31 Identities=26% Similarity=0.460 Sum_probs=19.3
Q ss_pred CCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCC
Q ss_conf 2556763220011055889845998613277789
Q gi|254780498|r 129 SRISGVDRPSLAAFWPTVKGKCIILDVGATIGST 162 (364)
Q Consensus 129 g~i~Gv~RPala~~~Pt~~g~~vllD~GAN~d~~ 162 (364)
|--.-|-|.|+.. +.++..+|+|||.|+-.+
T Consensus 181 G~~~eVGRSc~l~---~~~~~~illDcG~~~~~~ 211 (630)
T TIGR03675 181 GGFREVGRSALLL---STPESRILLDCGVNVGAN 211 (630)
T ss_pred CCCCCCCCEEEEE---ECCCEEEEEECCCCCCCC
T ss_conf 6767026458999---639817999888887777
No 58
>TIGR03674 fen_arch flap structure-specific endonuclease. Endonuclease that cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Has 5'-endo-/exonuclease and 5'-pseudo-Y-endonuclease activities. Cleaves the junction between single and double-stranded regions of flap DNA
Probab=41.56 E-value=26 Score=15.56 Aligned_cols=94 Identities=17% Similarity=0.260 Sum_probs=52.0
Q ss_pred HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCE-E---EEECC---CCCCCCHHHHHHH
Q ss_conf 999999854995399970642678888875322556763220011055889845-9---98613---2777898999999
Q gi|254780498|r 97 WRAIEAVKKNQAASVVTAGNTGALIAMARLCLSRISGVDRPSLAAFWPTVKGKC-I---ILDVG---ATIGSTVSHMVQL 169 (364)
Q Consensus 97 ~~a~~lvk~g~aDa~VSaGnTGA~la~a~~~lg~i~Gv~RPala~~~Pt~~g~~-v---llD~G---AN~d~~~~~L~qf 169 (364)
..|+.|++.|.+||++| -.+-+++-++..+++.+.--. ...+|...... + ++|+- -..+-+.++|+++
T Consensus 155 aqca~L~k~g~vdav~S-eD~D~l~fG~~~virnl~~~g----~~k~~~~~~~~~~~~e~i~l~~~l~~l~lt~eqfidl 229 (338)
T TIGR03674 155 AQAAYMAKKGDVDYVGS-QDYDSLLFGAPRLVRNLTISG----KRKLPGKNIYVEVKPELIELEEVLSELGITREQLIDI 229 (338)
T ss_pred HHHHHHHHCCCEEEEEC-CCHHHHHCCCCEEEHHHCCCC----CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 99999997497259961-540033228765101112455----5135664543324577830998887738999999999
Q ss_pred HHH-HHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHC
Q ss_conf 999-999999856899965899840455555657999999997402
Q gi|254780498|r 170 SIL-GSFFARSVAGINCPSIGLLNVGTEEIKGNDVLQESARLLRGE 214 (364)
Q Consensus 170 A~m-Gs~yak~~~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~ 214 (364)
++| |+-|...+ |.||. +.|++|++++
T Consensus 230 cIL~GcDY~~gI-----~GIG~--------------k~A~klIkk~ 256 (338)
T TIGR03674 230 AILVGTDYNEGV-----KGIGP--------------KTALKLIKEH 256 (338)
T ss_pred HHHHCCCCCCCC-----CCCCH--------------HHHHHHHHHH
T ss_conf 997087567899-----98568--------------9999999985
No 59
>TIGR01448 recD_rel helicase, RecD/TraA family; InterPro: IPR006345 These sequences represent a family similar to RecD, the exodeoxyribonuclease V alpha chain of IPR006344 from INTERPRO. Members of this family, however, are not found in a context of RecB and RecC and are longer by about 200 amino acids at the amino end. Chlamydia muridarum has both a member of this family and a RecD. .
Probab=41.41 E-value=26 Score=15.54 Aligned_cols=189 Identities=19% Similarity=0.210 Sum_probs=92.3
Q ss_pred HHHHHHCC-CCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEE
Q ss_conf 99998579-91799978989999998626975155799778520177830679997137642799999998549953999
Q gi|254780498|r 34 SKFLEAHP-RIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVSIAMDERPADALRRGRNVSSMWRAIEAVKKNQAASVV 112 (364)
Q Consensus 34 ~~al~~~~-~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~vI~mde~P~~AlR~kK~~SSm~~a~~lvk~g~aDa~V 112 (364)
..+|+.-| +..++||||.+++=+. ..-..+.+-+..-+.|. +.. ....|..++ |+|..++.-++.|+.=.+-
T Consensus 473 ~~lL~a~P~~a~lllVGD~DQLPSV-~pG~VL~DLi~s~~iP~-~~L----T~vyRQ~~~-S~Ii~~Ah~~~~G~~Pvln 545 (769)
T TIGR01448 473 SSLLAAVPDHARLLLVGDADQLPSV-GPGQVLKDLIQSKVIPV-TRL----TKVYRQAEG-SSIITLAHKILQGEAPVLN 545 (769)
T ss_pred HHHHHHCCCCCEEEEECCCCCCCCC-CCCHHHHHHHHCCCCCE-EEC----CCEEEECCC-CHHHHHHHHHHCCCCCCCC
T ss_conf 9998617977779888376888988-64408999984688661-212----111241136-6467888987317887523
Q ss_pred EECCHHHH---------H-HHHHHHCC---------CCCCCCCCCHHHCCCCCCCCE-EEEECCCCCCCCHHHHHHHHHH
Q ss_conf 70642678---------8-88875322---------556763220011055889845-9986132777898999999999
Q gi|254780498|r 113 TAGNTGAL---------I-AMARLCLS---------RISGVDRPSLAAFWPTVKGKC-IILDVGATIGSTVSHMVQLSIL 172 (364)
Q Consensus 113 SaGnTGA~---------l-a~a~~~lg---------~i~Gv~RPala~~~Pt~~g~~-vllD~GAN~d~~~~~L~qfA~m 172 (364)
|.--.... + ..+..+.. +-.||.=-.|-++-|=.+|.. + ++|
T Consensus 546 ss~~~~Df~~~~~~~s~~e~~~~~i~~~v~~~~~~a~~~Gi~~~dIQVLaPM~kG~~Gi------------~~L------ 607 (769)
T TIGR01448 546 SSSAKKDFKFLKLDRSEPEEAAKHIPLMVEKIVGAAKKKGIPGADIQVLAPMYKGELGI------------KAL------ 607 (769)
T ss_pred CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHH------------HHH------
T ss_conf 24467667777640010106667899999887789871798600001525898984017------------888------
Q ss_pred HHHHHHHHCCC----CCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHCCCCCCCEEEECCHHHHHH
Q ss_conf 99999985689----99658998404555556579999999974024571320023455453245683899755127889
Q gi|254780498|r 173 GSFFARSVAGI----NCPSIGLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFIEANDIAKGFVDVIVTEGFSGNIA 248 (364)
Q Consensus 173 Gs~yak~~~~~----~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~~i~~g~~DVvV~DGFtGNi~ 248 (364)
...-+.+|+= +.+.| =--+.+-.||+.++|---.-=.+-+-+++-++=-|+...-..-+-|+|||| |-||.+
T Consensus 608 -N~~Lq~~LNP~qkG~~~~~--~~~~~~~R~GDrV~Qt~Ndyn~e~FNGD~G~I~~i~~a~~~~~k~~~~~~d-FdG~~~ 683 (769)
T TIGR01448 608 -NQELQDLLNPKQKGDQEVI--ELKEVEYRKGDRVMQTKNDYNKEVFNGDLGVIVEIEKAKEGELKKDLVVVD-FDGNEV 683 (769)
T ss_pred -HHHHHHHCCCCCCCCCCEE--EECCEEECCCCEEEEEECCCCCCCCCCCCEEEEEEECHHCCCCCCCEEEEE-ECCCEE
T ss_conf -8999997088323785206--515554468872465200765553366630445640022032336358998-759767
Q ss_pred HHH
Q ss_conf 999
Q gi|254780498|r 249 IKA 251 (364)
Q Consensus 249 LKt 251 (364)
.=+
T Consensus 684 ~~~ 686 (769)
T TIGR01448 684 LYT 686 (769)
T ss_pred EEC
T ss_conf 735
No 60
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=39.89 E-value=27 Score=15.40 Aligned_cols=44 Identities=23% Similarity=0.126 Sum_probs=23.4
Q ss_pred CCCCCCEEEEEECCC-CCCCCCHHHHHHHHHHHHCC-CCCCCEECC
Q ss_conf 689996589984045-55556579999999974024-571320023
Q gi|254780498|r 181 AGINCPSIGLLNVGT-EEIKGNDVLQESARLLRGEC-CGAFKYKGF 224 (364)
Q Consensus 181 ~~~~~PrVgLLNiG~-E~~KG~~~~kea~~LL~~~~-~~~~nF~Gn 224 (364)
+++..++.-++++|- ++.||-+..-+|++.|++.. .-.+-++|.
T Consensus 186 ~~~~~~~~vi~~vGRl~~~Kg~~~Li~A~~~l~~~~~~~~l~ivG~ 231 (358)
T cd03812 186 LGILEDKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGD 231 (358)
T ss_pred HCCCCCCEEEEEECCCHHHHCCHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 3899898699996047665171889999998651088823999627
No 61
>TIGR00378 cax calcium/proton exchanger; InterPro: IPR004798 This is a group of calcium/proton exchanger proteins. In Arabidopsis thaliana the transporter is responsible for maintaining low cytosolic-free Ca2+ concentrations in the plant cells by catalyzing pH gradient-energized vacuolar Ca2+ accumulation ..
Probab=39.64 E-value=26 Score=15.57 Aligned_cols=81 Identities=31% Similarity=0.420 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHCCCCCCEE-EEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHCCCCCCCEEEECCHHHHHH
Q ss_conf 9999999998568999658-998404555556579999999974024571320023455453245683899755127889
Q gi|254780498|r 170 SILGSFFARSVAGINCPSI-GLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFIEANDIAKGFVDVIVTEGFSGNIA 248 (364)
Q Consensus 170 A~mGs~yak~~~~~~~PrV-gLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~~i~~g~~DVvV~DGFtGNi~ 248 (364)
|.||.+.-+ +.-+-=||+ |||| .+=||.. +|.= -=++
T Consensus 35 a~mg~ATEe-la~~aGp~iGGLLN----ATFGNAv-----ELI~--------------------------------s~iA 72 (363)
T TIGR00378 35 AYMGRATEE-LAVVAGPRIGGLLN----ATFGNAV-----ELIV--------------------------------SLIA 72 (363)
T ss_pred HHHHHHHHH-HHHHHCCCCCCHHC----CHHHHHH-----HHHH--------------------------------HHHH
T ss_conf 998656788-89883677672120----1244589-----9999--------------------------------9998
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 9998888999999999863222088999999899999999726968
Q gi|254780498|r 249 IKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFDPR 294 (364)
Q Consensus 249 LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~ 294 (364)
|| ||..+.+...+-.++-+|++==+|..+.-+.+|+-+|.|++.
T Consensus 73 LK--eGl~~iV~Asl~GS~lgNLLLV~Gl~ff~GGl~yk~Q~Fn~~ 116 (363)
T TIGR00378 73 LK--EGLVEIVKASLTGSVLGNLLLVLGLAFFLGGLKYKRQEFNQL 116 (363)
T ss_pred HH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHH
T ss_conf 60--025678899999999999999999999864642010453478
No 62
>cd01915 CODH Carbon monoxide dehydrogenase (CODH) is found in acetogenic and methanogenic organisms and is responsible for the synthesis and breakdown of acetyl-CoA, respectively. CODH has two types of metal clusters, a cubane [Fe4-S4] center (B-cluster) similar to that of hybrid cluster protein (HCP) and a Ni-Fe-S center (C-cluster) where carbon monoxide oxidation occurs. Bifunctional CODH forms a heterotetramer with acetyl-CoA synthase (ACS) consisting of two CODH and two ACS subunits while monofunctional CODH forms a homodimer. Bifunctional CODH reduces carbon dioxide to carbon monoxide and ACS then synthesizes acetyl-CoA from carbon monoxide, CoA, and a methyl group donated by another protein (CoFeSP), while monofunctional CODH oxidizes carbon monoxide to carbon dioxide. CODH and ACS each have a metal cluster referred to as the C- and A-clusters, respectively.
Probab=39.39 E-value=28 Score=15.35 Aligned_cols=90 Identities=14% Similarity=0.206 Sum_probs=55.3
Q ss_pred EECCCCCCCCHHHHHH-HHHHHH-----------HHHHHHCCCCCCEEEEEECCC-------------CCCCCCHHHHHH
Q ss_conf 8613277789899999-999999-----------999985689996589984045-------------555565799999
Q gi|254780498|r 153 LDVGATIGSTVSHMVQ-LSILGS-----------FFARSVAGINCPSIGLLNVGT-------------EEIKGNDVLQES 207 (364)
Q Consensus 153 lD~GAN~d~~~~~L~q-fA~mGs-----------~yak~~~~~~~PrVgLLNiG~-------------E~~KG~~~~kea 207 (364)
--+.-|+|.+|.+|.. +-++|- ...-.+||.+.|++.--|.|. ++.-...+++.+
T Consensus 185 hrT~~g~d~D~~~l~~~~lR~gla~g~~G~~~~t~l~DiLfGtP~p~~~~~nlGvl~~d~VNI~vhGH~P~l~e~iv~~a 264 (613)
T cd01915 185 HRTHTGVDSDPVSLLLHSLRLGLAAGYTGLMLATELQDILFGTPKPVVSEANLGVLDPDYVNIAVHGHNPVLSEAIVEAA 264 (613)
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHH
T ss_conf 88536899999999999999998532688899999999983899873424676525889736997189874999999997
Q ss_pred H-----HHHHHCCCCCCCEECCCC-HHHCC-------------------CCCCCEEEECC
Q ss_conf 9-----997402457132002345-54532-------------------45683899755
Q gi|254780498|r 208 A-----RLLRGECCGAFKYKGFIE-ANDIA-------------------KGFVDVIVTEG 242 (364)
Q Consensus 208 ~-----~LL~~~~~~~~nF~GniE-g~~i~-------------------~g~~DVvV~DG 242 (364)
- ++-|+...+.||++|-+. |+|++ +|.+|.+|.|=
T Consensus 265 ~~~e~~~~Ak~aGAkGI~v~G~cCTG~E~l~R~gip~agN~~~qEl~l~TGAvDa~vvD~ 324 (613)
T cd01915 265 RELELQEEAKAAGAKGINVVGICCTGNELLMRHGVPLAGNWLSQELAIATGAVDAMVVDV 324 (613)
T ss_pred CCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEC
T ss_conf 197999999974988646999936429888616970005669889999837704899843
No 63
>PRK10802 peptidoglycan-associated outer membrane lipoprotein; Provisional
Probab=39.11 E-value=28 Score=15.32 Aligned_cols=16 Identities=25% Similarity=0.428 Sum_probs=5.3
Q ss_pred CEEEEEECCCCCCCCC
Q ss_conf 6589984045555565
Q gi|254780498|r 186 PSIGLLNVGTEEIKGN 201 (364)
Q Consensus 186 PrVgLLNiG~E~~KG~ 201 (364)
|.+-+.=.|.-+..|+
T Consensus 99 p~~~v~i~GhtD~~Gt 114 (173)
T PRK10802 99 PSYKVTVEGHADERGT 114 (173)
T ss_pred CCEEEEEEEECCCCCC
T ss_conf 9917999874699884
No 64
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein; InterPro: IPR014191 Members of this entry represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR, see IPR012837 from INTERPRO). Members of this entry are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of these proteins as RNR activating proteins is partly from pairing with the candidate RNR and further supported by the finding that upstream of these operons are examples of a conserved regulatory element that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes ..
Probab=36.53 E-value=31 Score=15.07 Aligned_cols=40 Identities=15% Similarity=0.310 Sum_probs=33.4
Q ss_pred EEEEECCCCC----CCCHHHHHHHHHHHHHCCCCEEEEECCHHH
Q ss_conf 9999746877----781777999999998579917999789899
Q gi|254780498|r 14 TISLDLMGGD----LGARDLILGASKFLEAHPRIRFLMYGDAKV 53 (364)
Q Consensus 14 kIAVDaMGGD----~~P~~vi~Ga~~al~~~~~i~iiLvGdee~ 53 (364)
|++|=-|||| .-|+++++=+..+-++++++++.||-=.+.
T Consensus 70 K~Cv~FlGGEPLAPw~~~~l~~Ll~~~k~~~~~L~v~LYTG~~~ 113 (165)
T TIGR02826 70 KVCVLFLGGEPLAPWEPEALLSLLKLVKEEHAGLKVCLYTGREH 113 (165)
T ss_pred HHEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 02020047898873376899999999997538866888508854
No 65
>COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only]
Probab=35.77 E-value=19 Score=16.35 Aligned_cols=13 Identities=23% Similarity=0.618 Sum_probs=6.6
Q ss_pred EEEEECCCCCCCC
Q ss_conf 5998613277789
Q gi|254780498|r 150 CIILDVGATIGST 162 (364)
Q Consensus 150 ~vllD~GAN~d~~ 162 (364)
.+|+|||.|+-+.
T Consensus 205 rVLlDcG~n~a~~ 217 (637)
T COG1782 205 RVLLDCGVNVAGN 217 (637)
T ss_pred EEEEECCCCCCCC
T ss_conf 3899636567788
No 66
>TIGR02768 TraA_Ti Ti-type conjugative transfer relaxase TraA; InterPro: IPR014136 This entry represents the Ti-type conjugative transfer relaxase TraA. TraA contains domains distinctive of a single strand exonuclease (N-terminus, MobA/MobL, IPR005053 from INTERPRO) as well as a helicase domain (central region, homologous to the corresponding region of the F-type relaxase TraI, IPR014129 from INTERPRO). This protein likely fills the same role as TraI(F), nicking (at the oriT site) and unwinding the coiled plasmid prior to conjugative transfer ..
Probab=35.49 E-value=32 Score=14.96 Aligned_cols=16 Identities=19% Similarity=0.356 Sum_probs=7.6
Q ss_pred CCEEEEECCHHHHHHH
Q ss_conf 9179997898999999
Q gi|254780498|r 42 RIRFLMYGDAKVCLPI 57 (364)
Q Consensus 42 ~i~iiLvGdee~I~~~ 57 (364)
..+|+||||.++++|+
T Consensus 529 GaKvVLvGD~~QLqaI 544 (888)
T TIGR02768 529 GAKVVLVGDPEQLQAI 544 (888)
T ss_pred CCCEEEECCHHHHCHH
T ss_conf 7605984885782442
No 67
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=35.39 E-value=32 Score=14.95 Aligned_cols=69 Identities=22% Similarity=0.271 Sum_probs=39.4
Q ss_pred CCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHC--CCCCCCEEEEC-----CHHHHHHHHHHHHHH
Q ss_conf 99658998404555556579999999974024571320023455453--24568389975-----512788999988889
Q gi|254780498|r 184 NCPSIGLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFIEANDI--AKGFVDVIVTE-----GFSGNIAIKAAEGAV 256 (364)
Q Consensus 184 ~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~~i--~~g~~DVvV~D-----GFtGNi~LKt~EG~~ 256 (364)
++|.+-|+=+|. |.+. .+--++.++....++.|.|++...++ +-..+||.|.= +|.+.+-.|..|.++
T Consensus 247 ~~~~~~l~ivG~----G~~~-~~l~~~~~~~~~~~V~~~G~v~~~~~~~~~~~adi~v~p~~~~~~~~~~~P~kllEAma 321 (394)
T cd03794 247 DRPDIRFLIVGD----GPEK-EELKELAKALGLDNVTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMA 321 (394)
T ss_pred CCCCEEEEEECC----CHHH-HHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHH
T ss_conf 589859999568----5167-89999999819994998163046136778742969999277754457735689999998
Q ss_pred H
Q ss_conf 9
Q gi|254780498|r 257 R 257 (364)
Q Consensus 257 ~ 257 (364)
.
T Consensus 322 ~ 322 (394)
T cd03794 322 A 322 (394)
T ss_pred C
T ss_conf 4
No 68
>pfam06874 FBPase_2 Firmicute fructose-1,6-bisphosphatase. This family consists of several bacterial fructose-1,6-bisphosphatase proteins (EC:3.1.3.11) which seem to be specific to phylum Firmicutes. Fructose-1,6-bisphosphatase (FBPase) is a well known enzyme involved in gluconeogenesis. This family does not seem to be structurally related to pfam00316.
Probab=35.23 E-value=32 Score=14.94 Aligned_cols=12 Identities=17% Similarity=0.249 Sum_probs=4.7
Q ss_pred HHHHHHHHHCCC
Q ss_conf 999999863222
Q gi|254780498|r 259 ISGVLQKSLNRT 270 (364)
Q Consensus 259 ~~~~lk~~~~~~ 270 (364)
+++.|+.+|..|
T Consensus 372 v~~~L~~sF~~s 383 (641)
T pfam06874 372 VIDKLLSSFQNS 383 (641)
T ss_pred HHHHHHHHHHCC
T ss_conf 999999998617
No 69
>PRK07048 serine/threonine dehydratase; Validated
Probab=33.77 E-value=13 Score=17.46 Aligned_cols=56 Identities=21% Similarity=0.233 Sum_probs=30.0
Q ss_pred CCCCCCCCCC-HHHHHHHHCCCCHHHHHHHHHHHCCCCEEEE--EECCHHHHHHHHHHHCCC
Q ss_conf 7852017783-0679997137642799999998549953999--706426788888753225
Q gi|254780498|r 72 HCEVSIAMDE-RPADALRRGRNVSSMWRAIEAVKKNQAASVV--TAGNTGALIAMARLCLSR 130 (364)
Q Consensus 72 ~a~~vI~mde-~P~~AlR~kK~~SSm~~a~~lvk~g~aDa~V--SaGnTGA~la~a~~~lg~ 130 (364)
.++-+..++. .|.-++|- |. + .+.-.++-++....++| |+||+|.-+|.+-..+|.
T Consensus 38 g~~v~lK~E~~qptGSFK~-RG-a-~~~l~~l~~~~~~~gvV~aSsGN~g~avA~aa~~~G~ 96 (321)
T PRK07048 38 GAQVFFKCENFQRMGAFKF-RG-A-YNALSQFSAEQRRAGVVTFSSGNHAQAIALAARLLGI 96 (321)
T ss_pred CCEEEEEECCCCCCCCCHH-HH-H-HHHHHHCCHHHCCCCEEEECCCCHHHHHHHHHHHHCC
T ss_conf 9979998325898788789-99-9-9999960177456847996787379999999987099
No 70
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=33.29 E-value=35 Score=14.74 Aligned_cols=12 Identities=50% Similarity=0.725 Sum_probs=7.1
Q ss_pred CCEEEEEECCHH
Q ss_conf 953999706426
Q gi|254780498|r 107 QAASVVTAGNTG 118 (364)
Q Consensus 107 ~aDa~VSaGnTG 118 (364)
++|.+++.|-|+
T Consensus 58 ~~DlIIttGG~s 69 (133)
T cd00758 58 EADLVLTTGGTG 69 (133)
T ss_pred CCCEEEECCCCC
T ss_conf 499999938866
No 71
>COG5321 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.28 E-value=26 Score=15.56 Aligned_cols=28 Identities=21% Similarity=0.394 Sum_probs=23.4
Q ss_pred CHHHCCCCCCCEEEECCHHHHHHHHHHH
Q ss_conf 5545324568389975512788999988
Q gi|254780498|r 226 EANDIAKGFVDVIVTEGFSGNIAIKAAE 253 (364)
Q Consensus 226 Eg~~i~~g~~DVvV~DGFtGNi~LKt~E 253 (364)
-+.+||-..|-.++.|||.+.|+-..-|
T Consensus 98 vP~~IfPeecGlilsDGyGa~ilReApe 125 (164)
T COG5321 98 VPDEIFPEECGLILSDGYGAEILREAPE 125 (164)
T ss_pred CCCCCCCCCCCEEEECCCCHHHHHCCCC
T ss_conf 8634386667757654623877740854
No 72
>KOG1499 consensus
Probab=33.12 E-value=35 Score=14.72 Aligned_cols=78 Identities=21% Similarity=0.322 Sum_probs=51.7
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCC-CC-EECCCCH
Q ss_conf 599861327778989999999999999998568999658998404555556579999999974024571-32-0023455
Q gi|254780498|r 150 CIILDVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLLNVGTEEIKGNDVLQESARLLRGECCGA-FK-YKGFIEA 227 (364)
Q Consensus 150 ~vllD~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~~-~n-F~GniEg 227 (364)
-++||+|.- .-.|-.||.-.- |+.++.++. ++..+-|-++.+.....+ |. ..|-||.
T Consensus 62 K~VlDVGcG----tGILS~F~akAG--A~~V~aVe~---------------S~ia~~a~~iv~~N~~~~ii~vi~gkvEd 120 (346)
T KOG1499 62 KTVLDVGCG----TGILSMFAAKAG--ARKVYAVEA---------------SSIADFARKIVKDNGLEDVITVIKGKVED 120 (346)
T ss_pred CEEEECCCC----CCHHHHHHHHHC--CCEEEEEEC---------------HHHHHHHHHHHHHCCCCCEEEEEECCEEE
T ss_conf 789975788----128899988737--533999962---------------68999999999856866059995030578
Q ss_pred HHCCCCCCCEEEECCHHHHHHH
Q ss_conf 4532456838997551278899
Q gi|254780498|r 228 NDIAKGFVDVIVTEGFSGNIAI 249 (364)
Q Consensus 228 ~~i~~g~~DVvV~DGFtGNi~L 249 (364)
-+|...++||+|+.- -|.-+|
T Consensus 121 i~LP~eKVDiIvSEW-MGy~Ll 141 (346)
T KOG1499 121 IELPVEKVDIIVSEW-MGYFLL 141 (346)
T ss_pred EECCCCCEEEEEEHH-HHHHHH
T ss_conf 764755402996301-247877
No 73
>PRK10073 predicted glycosyl transferase; Provisional
Probab=33.09 E-value=35 Score=14.72 Aligned_cols=38 Identities=29% Similarity=0.560 Sum_probs=15.1
Q ss_pred CEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHCC
Q ss_conf 6589984045555565799999999740245713200234554532
Q gi|254780498|r 186 PSIGLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFIEANDIA 231 (364)
Q Consensus 186 PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~~i~ 231 (364)
|+|-+++ +++.|-...+.+--... . + .|+.|+-++|.+
T Consensus 61 ~~i~vi~---~~N~G~s~ARN~gl~~a--~-G--~yi~f~DsDD~l 98 (329)
T PRK10073 61 PHVRLLH---QANAGASVARNTGLAVA--T-G--KYVAFVDADDEV 98 (329)
T ss_pred CCEEEEE---CCCCCHHHHHHHHHHHC--C-C--CEEEEECCCCCC
T ss_conf 9899996---68886189999999974--8-8--889997577275
No 74
>COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane]
Probab=32.29 E-value=36 Score=14.64 Aligned_cols=96 Identities=20% Similarity=0.331 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCC
Q ss_conf 77999999998579917999789899999986269751557997785201778306799971376427999999985499
Q gi|254780498|r 28 DLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVSIAMDERPADALRRGRNVSSMWRAIEAVKKNQ 107 (364)
Q Consensus 28 ~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~vI~mde~P~~AlR~kK~~SSm~~a~~lvk~g~ 107 (364)
.++..+ .++.|+.+++.+||.. ..| -.+++...++. -++...-.+++.+
T Consensus 19 sVlrei---~~~LP~e~~iY~~D~a-------~~P----------------YG~ks~e~I~~----~~~~i~~~l~~~~- 67 (269)
T COG0796 19 SVLREI---RRQLPDEDIIYVGDTA-------RFP----------------YGEKSEEEIRE----RTLEIVDFLLERG- 67 (269)
T ss_pred HHHHHH---HHHCCCCCEEEEECCC-------CCC----------------CCCCCHHHHHH----HHHHHHHHHHHCC-
T ss_conf 999999---9978998689981477-------899----------------99899999999----9999999999729-
Q ss_pred CEEEEEECCHHHHHHHHHH-------HCCCCCCCCCCCHHHCCCCCCCCEEEEECCCC
Q ss_conf 5399970642678888875-------32255676322001105588984599861327
Q gi|254780498|r 108 AASVVTAGNTGALIAMARL-------CLSRISGVDRPSLAAFWPTVKGKCIILDVGAT 158 (364)
Q Consensus 108 aDa~VSaGnTGA~la~a~~-------~lg~i~Gv~RPala~~~Pt~~g~~vllD~GAN 158 (364)
.+.+|=|.||...++...+ ++|.+|+| |||+.. |+++..-++-.=+.
T Consensus 68 ik~lVIACNTASa~al~~LR~~~~iPVvGviPai-k~A~~~---t~~~~IgViaT~~T 121 (269)
T COG0796 68 IKALVIACNTASAVALEDLREKFDIPVVGVIPAI-KPAVAL---TRNGRIGVIATPAT 121 (269)
T ss_pred CCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCH-HHHHHH---CCCCEEEEEECCCH
T ss_conf 9889996651789999999986799989953154-999973---13875899955112
No 75
>PRK03980 flap endonuclease-1; Provisional
Probab=31.65 E-value=37 Score=14.57 Aligned_cols=94 Identities=23% Similarity=0.318 Sum_probs=51.9
Q ss_pred HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCC------CCCEEEE-ECCCCCCCCHHHHHHH
Q ss_conf 99999985499539997064267888887532255676322001105588------9845998-6132777898999999
Q gi|254780498|r 97 WRAIEAVKKNQAASVVTAGNTGALIAMARLCLSRISGVDRPSLAAFWPTV------KGKCIIL-DVGATIGSTVSHMVQL 169 (364)
Q Consensus 97 ~~a~~lvk~g~aDa~VSaGnTGA~la~a~~~lg~i~Gv~RPala~~~Pt~------~g~~vll-D~GAN~d~~~~~L~qf 169 (364)
..|+.|++.|.+||++| -.+-+++-++..+++.+..-.+ .-+|.. ....+-+ ++=-..+-+.++|+++
T Consensus 108 aqca~L~~~g~v~~v~S-eD~D~l~~G~~~~lrnl~~~~~----~k~~~~~~~~~~~~e~i~l~~il~~l~lt~eqfidl 182 (295)
T PRK03980 108 AQAAYMVKKGDAWAVAS-QDYDSLLFGAPRLVRNLTISGK----RKLPGKNVYVEVKPELIELEEVLKELGITREQLIDI 182 (295)
T ss_pred HHHHHHHHCCCEEEEEE-CCCCHHHCCCHHHHHHCCCCCC----CCCCCCCCCCCCCHHHEEHHHHHHHCCCCHHHHHHH
T ss_conf 99999997697589970-4634121176057642013566----024564432124654423998998839999999999
Q ss_pred HHH-HHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHC
Q ss_conf 999-999999856899965899840455555657999999997402
Q gi|254780498|r 170 SIL-GSFFARSVAGINCPSIGLLNVGTEEIKGNDVLQESARLLRGE 214 (364)
Q Consensus 170 A~m-Gs~yak~~~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~ 214 (364)
++| |+-|.. +| |.||. +.|++|++++
T Consensus 183 cIL~GcDY~~---gI--~gIGp--------------k~Alklikk~ 209 (295)
T PRK03980 183 AILVGTDYNP---GV--KGIGP--------------KTALKLIKKH 209 (295)
T ss_pred HHHCCCCCCC---CC--CCCCH--------------HHHHHHHHHH
T ss_conf 9845888999---99--98429--------------9999999996
No 76
>PRK03343 transaldolase; Validated
Probab=31.55 E-value=18 Score=16.61 Aligned_cols=80 Identities=24% Similarity=0.319 Sum_probs=53.7
Q ss_pred HHHHHHHHHC-----CCCEEEEE-------ECCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCC-CC---EEEEECCCCC
Q ss_conf 9999999854-----99539997-------0642678888875322556763220011055889-84---5998613277
Q gi|254780498|r 96 MWRAIEAVKK-----NQAASVVT-------AGNTGALIAMARLCLSRISGVDRPSLAAFWPTVK-GK---CIILDVGATI 159 (364)
Q Consensus 96 m~~a~~lvk~-----g~aDa~VS-------aGnTGA~la~a~~~lg~i~Gv~RPala~~~Pt~~-g~---~vllD~GAN~ 159 (364)
+..|+.+++. +--||+|| |-+|.++++-++....+ |.||-+|.-+|... |- .-++-.|.||
T Consensus 86 i~~A~d~l~pvy~~t~G~DG~VSlEVdP~la~Dt~~Ti~eA~rL~~~---v~rpN~mIKIPaT~aGl~Ai~~Lia~GIsV 162 (370)
T PRK03343 86 VRNACDVLRPVYEATGGVDGRVSIEVSPRLAHDTEATIAEARRLWAA---VDRPNLMIKIPATPEGLPAIEALIAEGISV 162 (370)
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEEEECCCHHCCHHHHHHHHHHHHHH---HCCCCEEEECCCCHHHHHHHHHHHHCCCCE
T ss_conf 99999998999973599872799964800101848899999999997---189973896588440389999999879856
Q ss_pred CCCHH-HHHHHHHHHHHHHH
Q ss_conf 78989-99999999999999
Q gi|254780498|r 160 GSTVS-HMVQLSILGSFFAR 178 (364)
Q Consensus 160 d~~~~-~L~qfA~mGs~yak 178 (364)
+++-- -+-|+-..--+|.+
T Consensus 163 NvTLiFS~~qy~~v~eAy~~ 182 (370)
T PRK03343 163 NVTLIFSVERYRAVADAYLR 182 (370)
T ss_pred EEEEECCHHHHHHHHHHHHH
T ss_conf 25774159999999999999
No 77
>pfam11725 AvrE Pathogenicity factor. This family is secreted by gram-negative Gammaproteobacteria such as Pseudomonas syringae of tomato and the fire blight plant pathogen Erwinia amylovora, amongst others. It is an essential pathogenicity factor of approximately 198 kDa. Its injection into the host-plant is dependent upon the bacterial type III or Hrp secretion system. The family is long and carries a number of predicted functional regions, including an ERMS or endoplasmic reticulum membrane retention signal at both the C- and the N-termini, a leucine-zipper motif from residues 539-560, and a nuclear localisation signal at 1358-1361. this conserved AvrE-family of effectors is among the few that are required for full virulence of many phytopathogenic pseudomonads, erwinias and pantoeas.
Probab=30.93 E-value=34 Score=14.78 Aligned_cols=35 Identities=26% Similarity=0.489 Sum_probs=18.6
Q ss_pred HHHHHHHHHCCHHHCCCEEEEEECCEEEEECCCCC
Q ss_conf 99999997269687087467421614898388998
Q gi|254780498|r 282 KSLREVKEGFDPRNFNGGVLLGVDGLVVKGHGSSD 316 (364)
Q Consensus 282 ~~l~~~~~~~d~~~~gGa~llGl~g~vik~HG~s~ 316 (364)
+.|++|+..+.-..|..+++||=.--|+..||--.
T Consensus 968 k~Le~fR~ELE~hs~~a~~~lGq~~GVLn~hGe~~ 1002 (1771)
T pfam11725 968 KDLEQFREELENHSTTAAILLGQQQGVLNSHGEIN 1002 (1771)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC
T ss_conf 99999999998878999997511046004687117
No 78
>COG1165 MenD 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [Coenzyme metabolism]
Probab=30.71 E-value=31 Score=15.05 Aligned_cols=81 Identities=19% Similarity=0.224 Sum_probs=44.7
Q ss_pred HHHHHHCCCCEEEEEECC--HHHHH-----------------HHHHHHCCCCCCCCCCC---------HHHCCC------
Q ss_conf 999985499539997064--26788-----------------88875322556763220---------011055------
Q gi|254780498|r 99 AIEAVKKNQAASVVTAGN--TGALI-----------------AMARLCLSRISGVDRPS---------LAAFWP------ 144 (364)
Q Consensus 99 a~~lvk~g~aDa~VSaGn--TGA~l-----------------a~a~~~lg~i~Gv~RPa---------la~~~P------ 144 (364)
.=++.+.|-.|+|++-|| |-=.+ .++.|-||..+.-.||- -|..+|
T Consensus 15 ~eeL~r~GV~~vvicPGSRSTPLala~~~~~~i~~hv~~DERsagFfALGlAKas~rPVavi~TSGTA~ANl~PAViEA~ 94 (566)
T COG1165 15 LEELARLGVRDVVICPGSRSTPLALAAAAHDAITVHVHIDERSAGFFALGLAKASKRPVAVICTSGTAVANLYPAVIEAN 94 (566)
T ss_pred HHHHHHCCCCEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCHHHHHHH
T ss_conf 99999728867998989888588999985688079972164327778876655138987999767405641157877543
Q ss_pred ---------CCCCCEEEEECCCC---------------------CCCCHHHHHHHHHHHHHHHHH
Q ss_conf ---------88984599861327---------------------778989999999999999998
Q gi|254780498|r 145 ---------TVKGKCIILDVGAT---------------------IGSTVSHMVQLSILGSFFARS 179 (364)
Q Consensus 145 ---------t~~g~~vllD~GAN---------------------~d~~~~~L~qfA~mGs~yak~ 179 (364)
|.+.|-=|.+|||| ++.+++.+-..+...+.+++.
T Consensus 95 ~srvpLIVLTADRP~EL~~~GAnQaI~Q~~lfgs~v~~~~~L~~P~~~~~~~~~~~~~~~~~~~~ 159 (566)
T COG1165 95 LSRVPLIVLTADRPPELRGCGANQAIDQTGLFGSYVRASIDLPLPEDDIEALWYLRTIASAAAQQ 159 (566)
T ss_pred HCCCCEEEEECCCCHHHHCCCCCHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 13884699828999788547985021232020256322104789988877899999999999874
No 79
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=30.09 E-value=39 Score=14.40 Aligned_cols=16 Identities=6% Similarity=0.048 Sum_probs=11.6
Q ss_pred CCCHHHHHHHHHHHHH
Q ss_conf 9986899999999999
Q gi|254780498|r 314 SSDAKSIFNVLGIAHN 329 (364)
Q Consensus 314 ~s~~~a~~~ai~~a~~ 329 (364)
.-|+.+++.+|....+
T Consensus 328 ~~~~~~l~~~i~~l~~ 343 (377)
T cd03798 328 PGDPEALAEAILRLLA 343 (377)
T ss_pred CCCHHHHHHHHHHHHC
T ss_conf 9999999999999987
No 80
>PRK00726 murG N-acetylglucosaminyl transferase; Provisional
Probab=30.04 E-value=39 Score=14.40 Aligned_cols=105 Identities=17% Similarity=0.082 Sum_probs=52.8
Q ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-HHCCCCCCCEEEECCCCCCCCC--CHHHHHHH
Q ss_conf 23999974687778177799999999857991799978989999998-6269751557997785201778--30679997
Q gi|254780498|r 12 VDTISLDLMGGDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPIL-DSHPLLKERSCFHHCEVSIAMD--ERPADALR 88 (364)
Q Consensus 12 m~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l-~~~~~~~~ri~Ii~a~~vI~md--e~P~~AlR 88 (364)
|.||.+=+ ||--|---.-.+....|++ ++.+++++|++..++..+ ++.+ -.+..++....-... ......++
T Consensus 1 mkkI~i~~-GGTGGHi~Palala~~L~~-~g~ev~~ig~~~g~E~~~v~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~ 75 (359)
T PRK00726 1 MKKILLAG-GGTGGHVFPALALAEELKK-RGWEVLWLGTKRGMEARLVPKAG---IEFHFIPIGGLRRKGSLANLKAPFK 75 (359)
T ss_pred CCEEEEEE-CCCHHHHHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHCCCCC---CCEEEEECCCCCCCCHHHHHHHHHH
T ss_conf 98899995-8868999999999999983-87989999788268654044149---8389977788898787999999999
Q ss_pred HCCCCHHHHHHHHHHHCCCCEEEEEECC--HHHHHHHH
Q ss_conf 1376427999999985499539997064--26788888
Q gi|254780498|r 89 RGRNVSSMWRAIEAVKKNQAASVVTAGN--TGALIAMA 124 (364)
Q Consensus 89 ~kK~~SSm~~a~~lvk~g~aDa~VSaGn--TGA~la~a 124 (364)
- --|++.+...+++-+-|.+|+.|. |...+.+|
T Consensus 76 l---~~~~~~~~~il~~~kPd~Vig~GGY~s~P~~laA 110 (359)
T PRK00726 76 L---LKGVLQARKILKRFKPDVVVGFGGYVSGPAGLAA 110 (359)
T ss_pred H---HHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHH
T ss_conf 9---9999999999997499999978974128999999
No 81
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=29.87 E-value=40 Score=14.38 Aligned_cols=24 Identities=25% Similarity=0.426 Sum_probs=8.9
Q ss_pred EEECCCCCCCCCHHHHHHHHHHHH
Q ss_conf 984045555565799999999740
Q gi|254780498|r 190 LLNVGTEEIKGNDVLQESARLLRG 213 (364)
Q Consensus 190 LLNiG~E~~KG~~~~kea~~LL~~ 213 (364)
|+.-||.....++...+-.+.+++
T Consensus 4 lv~HGSr~~~~~~~~~~l~~~l~~ 27 (101)
T cd03416 4 LVGHGSRDPRAAEALEALAERLRE 27 (101)
T ss_pred EEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 996799986899999999999997
No 82
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=29.40 E-value=40 Score=14.33 Aligned_cols=94 Identities=11% Similarity=0.100 Sum_probs=46.2
Q ss_pred CCEEEEECCCCCCCCH-HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCC
Q ss_conf 8459986132777898-999999999999999856899965899840455555657999999997402457132002345
Q gi|254780498|r 148 GKCIILDVGATIGSTV-SHMVQLSILGSFFARSVAGINCPSIGLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFIE 226 (364)
Q Consensus 148 g~~vllD~GAN~d~~~-~~L~qfA~mGs~yak~~~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniE 226 (364)
+..+++=+|=-..-|- +.|++ ++++. .. +.|.+-|+=+|.-+.+ +..++--+-+. -...+.|.|++.
T Consensus 192 ~~~~il~vGRL~~~KG~d~Li~------A~~~l-~~-~~p~~~lvIvGdGp~~--~~L~~l~~~~~--l~~~V~flG~v~ 259 (398)
T cd03796 192 DKITIVVISRLVYRKGIDLLVG------IIPEI-CK-KHPNVRFIIGGDGPKR--ILLEEMREKYN--LQDRVELLGAVP 259 (398)
T ss_pred CCEEEEEECCCCCHHHHHHHHH------HHHHH-HH-HCCCEEEEEECCCCCH--HHHHHHHHHHC--CCCEEEECCCCC
T ss_conf 9869999706750300999999------99999-96-5899599993787118--99999998723--367289758885
Q ss_pred HHHCC--CCCCCEEEECCHHHHHHHHHHHHHHHHHHH
Q ss_conf 54532--456838997551278899998888999999
Q gi|254780498|r 227 ANDIA--KGFVDVIVTEGFSGNIAIKAAEGAVRHISG 261 (364)
Q Consensus 227 g~~i~--~g~~DVvV~DGFtGNi~LKt~EG~~~~~~~ 261 (364)
..|+. -..+||+|.=.. .||..-.+.+
T Consensus 260 ~~~l~~~~~~aDvfv~PS~--------~Egfglv~lE 288 (398)
T cd03796 260 HERVRDVLVQGHIFLNTSL--------TEAFCIAIVE 288 (398)
T ss_pred HHHHHHHHHHHHEEECCCC--------CCCCCHHHHH
T ss_conf 6777888877442127654--------2466679999
No 83
>COG3370 Uncharacterized protein conserved in archaea [Function unknown]
Probab=29.02 E-value=41 Score=14.29 Aligned_cols=46 Identities=7% Similarity=0.185 Sum_probs=34.2
Q ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHHH-----CCCCEEEEECCHHHHHHH
Q ss_conf 2399997468777817779999999985-----799179997898999999
Q gi|254780498|r 12 VDTISLDLMGGDLGARDLILGASKFLEA-----HPRIRFLMYGDAKVCLPI 57 (364)
Q Consensus 12 m~kIAVDaMGGD~~P~~vi~Ga~~al~~-----~~~i~iiLvGdee~I~~~ 57 (364)
|.+++|=.+.||..-+...-|..-|-.. ..++++++||+.++....
T Consensus 1 MaK~lViI~Sgk~~~eK~~~al~fA~ns~knk~~~dVelifFGpse~~la~ 51 (113)
T COG3370 1 MAKVLVIISSGKENIEKALTALNFAYNSVKNKWFEDVELIFFGPSEKLLAK 51 (113)
T ss_pred CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCHHHHHHH
T ss_conf 972799997285058899999999999987523412689997725999982
No 84
>TIGR00674 dapA dihydrodipicolinate synthase; InterPro: IPR005263 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta-semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue . Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC, IPR005264 from INTERPRO) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Sinorhizobium meliloti protein mosA , which is involved in the biosynthesis of the rhizopine 3-O-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry . Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel. This family represents a subclass of dihydrodipicolinate synthase. ; GO: 0008840 dihydrodipicolinate synthase activity, 0019877 diaminopimelate biosynthetic process.
Probab=28.84 E-value=30 Score=15.11 Aligned_cols=52 Identities=27% Similarity=0.232 Sum_probs=28.3
Q ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCC-------HHHCCCCC--CCEEEECCHHHHH
Q ss_conf 899840455555657999999997402457132002345-------54532456--8389975512788
Q gi|254780498|r 188 IGLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFIE-------ANDIAKGF--VDVIVTEGFSGNI 247 (364)
Q Consensus 188 VgLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniE-------g~~i~~g~--~DVvV~DGFtGNi 247 (364)
+=|=||=+ -=|.++.-|+-..|-++. -|++|==| ..+|..-. -|..| |+||=
T Consensus 127 iiLYNvPs--RTg~~l~peTv~rLA~~~---~NI~aiKEa~g~l~~~~~i~~~~p~~dF~v---lsGDD 187 (288)
T TIGR00674 127 IILYNVPS--RTGVSLEPETVKRLAEEP---NNIVAIKEATGNLERISEIKAITPDDDFVV---LSGDD 187 (288)
T ss_pred EEEECCCC--CCCCCCCHHHHHHHHCCC---CCEEEEEECCCCHHHHHHHHHHCCCCCEEE---EECCC
T ss_conf 89842876--410178628999973016---770688726888899999998668985388---84786
No 85
>PTZ00188 adrenodoxin reductase; Provisional
Probab=28.83 E-value=35 Score=14.73 Aligned_cols=38 Identities=16% Similarity=0.254 Sum_probs=20.5
Q ss_pred CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 11389823999974687778177799999999857991799978
Q gi|254780498|r 6 VLQGGNVDTISLDLMGGDLGARDLILGASKFLEAHPRIRFLMYG 49 (364)
Q Consensus 6 ~~~~~~m~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~iiLvG 49 (364)
..+.+|+.||||= | .||.-...+- +|.+++++++-+|-
T Consensus 33 ~~~~~rPlRVAIV--G--SGPAGfYaA~--~Llk~~~v~VD~fE 70 (506)
T PTZ00188 33 LTNEAKPFKVGII--G--AGPSALYCCK--HLLKHERVKVDIFE 70 (506)
T ss_pred CCCCCCCCEEEEE--C--CCCHHHHHHH--HHHCCCCCEEEEEE
T ss_conf 2478876579998--8--8838999999--99638997798882
No 86
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=28.66 E-value=42 Score=14.25 Aligned_cols=35 Identities=26% Similarity=0.226 Sum_probs=21.2
Q ss_pred EEECCC-CCCCCCHHHHHHHHHHHHCCC-CCCCEECC
Q ss_conf 984045-555565799999999740245-71320023
Q gi|254780498|r 190 LLNVGT-EEIKGNDVLQESARLLRGECC-GAFKYKGF 224 (364)
Q Consensus 190 LLNiG~-E~~KG~~~~kea~~LL~~~~~-~~~nF~Gn 224 (364)
+|.+|- ++.||-+..-+|++.|++... -.+.++|.
T Consensus 181 il~vGRl~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~ 217 (348)
T cd03820 181 ILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGD 217 (348)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEC
T ss_conf 9999378632494999888898886489859999946
No 87
>TIGR01037 pyrD_sub1_fam dihydroorotate dehydrogenase family protein; InterPro: IPR005720 Dihydroorotate dehydrogenase (1.3.3.1 from EC) (DHOdehase) catalyzes the fourth step in the de novo biosynthesis of pyrimidine, the conversion of dihydroorotate into orotate. DHOdehase is a ubiquitous FAD flavoprotein. In bacteria (gene pyrD), DHOdease is located on the inner side of the cytosolic membrane. In some yeasts, such as in Saccharomyces cerevisiae (gene URA1, subfamily 2), it is a cytosolic protein while in other eukaryotes it is found in the mitochondria . This describes dihydroorotate dehydrogenases subfamily 1 that includes a number of uncharacterised proteins and a domain of dihydropyrimidine dehydrogenase.; GO: 0004158 dihydroorotate oxidase activity, 0006207 'de novo' pyrimidine base biosynthetic process, 0005737 cytoplasm.
Probab=28.29 E-value=42 Score=14.21 Aligned_cols=195 Identities=17% Similarity=0.233 Sum_probs=90.8
Q ss_pred EECCCCCCCC-HHHHHHHHHHHHHCC--CCEEE--EECCHHHHHHHHHH-CC-------CCCCCEEEECCCC--CCCCCC
Q ss_conf 9746877781-777999999998579--91799--97898999999862-69-------7515579977852--017783
Q gi|254780498|r 17 LDLMGGDLGA-RDLILGASKFLEAHP--RIRFL--MYGDAKVCLPILDS-HP-------LLKERSCFHHCEV--SIAMDE 81 (364)
Q Consensus 17 VDaMGGD~~P-~~vi~Ga~~al~~~~--~i~ii--LvGdee~I~~~l~~-~~-------~~~~ri~Ii~a~~--vI~mde 81 (364)
|-|||=-++- +..++-.....++-| |++|+ +||..++=-..+.+ .. ..+=++..=|+.. =++...
T Consensus 65 lNAiGL~NPG~e~fl~E~~~~~~e~~t~dvr~I~svyG~~~EEfa~va~~~e~A~~y~~~~ELN~SCPhvK~G~G~~iG~ 144 (308)
T TIGR01037 65 LNAIGLQNPGVEAFLEELKDVREEVPTHDVRLIASVYGESEEEFAEVAEKLEDADPYVDAYELNVSCPHVKGGGGIEIGQ 144 (308)
T ss_pred EEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCC
T ss_conf 75235898217999986325664389875289998318882258999998721134400001047774434234655477
Q ss_pred HHH------HHHHHCCC----------CHHHHHHHHHHHCCCCEEEEEECCHHHHH-HHHHHHCCCCCCCCCCCHHHCCC
Q ss_conf 067------99971376----------42799999998549953999706426788-88875322556763220011055
Q gi|254780498|r 82 RPA------DALRRGRN----------VSSMWRAIEAVKKNQAASVVTAGNTGALI-AMARLCLSRISGVDRPSLAAFWP 144 (364)
Q Consensus 82 ~P~------~AlR~kK~----------~SSm~~a~~lvk~g~aDa~VSaGnTGA~l-a~a~~~lg~i~Gv~RPala~~~P 144 (364)
+|- .++|.+-+ -+-+..=.+.+-+.=|||++ +=|| +. ....-+. -.||=|+.-+-
T Consensus 145 dP~l~~~vv~avK~~~d~Pv~aKLsPNV~Di~eiA~a~eeaGaDGlt-~INT--l~PGMkIDI~-----~~kPiLaNk~G 216 (308)
T TIGR01037 145 DPELSADVVKAVKDKVDVPVFAKLSPNVTDITEIAKAAEEAGADGLT-LINT--LRPGMKIDIK-----AKKPILANKTG 216 (308)
T ss_pred CHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEE-EEHH--HHHHHHHHHH-----CCCCCCEECCC
T ss_conf 87799999999830007865786486566899998887532776164-0012--0346777342-----07870000458
Q ss_pred CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECC
Q ss_conf 88984599861327778989999999999999998568999658998404555556579999999974024571320023
Q gi|254780498|r 145 TVKGKCIILDVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGF 224 (364)
Q Consensus 145 t~~g~~vllD~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~Gn 224 (364)
..+||-+. |==+ +|=...+|. ++-.-|-||.==| ..-+.|-+-|
T Consensus 217 GlSGPAIK----------PiA~----r~VYdly~~-~ddriPIiGvGGi--------~~~eDA~Efl------------- 260 (308)
T TIGR01037 217 GLSGPAIK----------PIAV----RMVYDLYKE-VDDRIPIIGVGGI--------TSFEDALEFL------------- 260 (308)
T ss_pred CCCCCCCC----------CEEE----EEHHHHHHH-HCCCCCEEEECCC--------CCHHHHHHHH-------------
T ss_conf 85075014----------2212----100004777-3782346863274--------5589999999-------------
Q ss_pred CCHHHCCCCCCCEEEECC--HHH-HHHHHHHHHHHHHHHH
Q ss_conf 455453245683899755--127-8899998888999999
Q gi|254780498|r 225 IEANDIAKGFVDVIVTEG--FSG-NIAIKAAEGAVRHISG 261 (364)
Q Consensus 225 iEg~~i~~g~~DVvV~DG--FtG-Ni~LKt~EG~~~~~~~ 261 (364)
+.|.-=|-|=-+ |.| .|..|-+||.-.|++.
T Consensus 261 ------~AGAsAVQvGtAvyy~g~~~f~~i~~~l~~fl~~ 294 (308)
T TIGR01037 261 ------MAGASAVQVGTAVYYRGYKVFKKIIEGLIAFLKE 294 (308)
T ss_pred ------HHCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf ------8522022000222117752448887678899987
No 88
>COG3933 Transcriptional antiterminator [Transcription]
Probab=28.16 E-value=43 Score=14.20 Aligned_cols=160 Identities=21% Similarity=0.279 Sum_probs=72.8
Q ss_pred CCCEEEEEE-CCHHH-HHH-HHHHHCC--CCCCCCCCCHHH-------------CCCCCCCCEEEEECCCCCCCCHHHHH
Q ss_conf 995399970-64267-888-8875322--556763220011-------------05588984599861327778989999
Q gi|254780498|r 106 NQAASVVTA-GNTGA-LIA-MARLCLS--RISGVDRPSLAA-------------FWPTVKGKCIILDVGATIGSTVSHMV 167 (364)
Q Consensus 106 g~aDa~VSa-GnTGA-~la-~a~~~lg--~i~Gv~RPala~-------------~~Pt~~g~~vllD~GAN~d~~~~~L~ 167 (364)
+++.+.|=| |++-| -|+ -+...|| -..+++=|-=.+ -.+..+|-.+|.|+|--
T Consensus 107 ~~v~vIiiAHG~sTASSmaevanrLL~~~~~~aiDMPLdvsp~~vle~l~e~~k~~~~~~GlllLVDMGSL--------- 177 (470)
T COG3933 107 PRVKVIIIAHGYSTASSMAEVANRLLGEEIFIAIDMPLDVSPSDVLEKLKEYLKERDYRSGLLLLVDMGSL--------- 177 (470)
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCHH---------
T ss_conf 84369997258640788999999986325301346877678899999999999844756745999825308---------
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEE------EECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCC-CHHHCCCCCCCEEEE
Q ss_conf 99999999999856899965899------84045555565799999999740245713200234-554532456838997
Q gi|254780498|r 168 QLSILGSFFARSVAGINCPSIGL------LNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFI-EANDIAKGFVDVIVT 240 (364)
Q Consensus 168 qfA~mGs~yak~~~~~~~PrVgL------LNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~Gni-Eg~~i~~g~~DVvV~ 240 (364)
.-.|+..-+. +|++--.|-. |+.|.+-.-|..+.+=+-.+.+ ||.++. -..+ .....-.+|+
T Consensus 178 --~~f~~~i~~~-~~ipv~~i~nVST~~vLea~rk~~l~~~le~I~~~i~~-------~~~~~~~~~~~-a~~~~kAlvt 246 (470)
T COG3933 178 --TSFGSIISEE-FGIPVKVIPNVSTSMVLEAGRKISLGLNLEQIYQSIQK-------DFPCYWCTPWP-AKNKKKALVT 246 (470)
T ss_pred --HHHHHHHHHH-HCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHH-------CCHHHHCCCCC-CCCCCCEEEE
T ss_conf --7899999998-68964997054189999999998734589999999863-------13343054266-5667767999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-----HHHHHHHHHHHHHHHCC
Q ss_conf 55127889999888899999999986322208899-----99998999999997269
Q gi|254780498|r 241 EGFSGNIAIKAAEGAVRHISGVLQKSLNRTLLSRI-----GCLLIKKSLREVKEGFD 292 (364)
Q Consensus 241 DGFtGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~-----~~~l~~~~l~~~~~~~d 292 (364)
--+|| ||+|.-+...+...........+ +..-....++++.+.+|
T Consensus 247 tC~TG-------~GtA~klk~~l~~~~~~~~d~~iv~~~~~~~~~~~~~~ql~~eye 296 (470)
T COG3933 247 TCITG-------EGTAEKLKKVLEEIIDTDLDIIIVACDYNKLASLERIEQLLEEYE 296 (470)
T ss_pred EECCC-------CCHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHC
T ss_conf 91258-------747999999987414410033145530147777889999997634
No 89
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=27.92 E-value=43 Score=14.17 Aligned_cols=36 Identities=14% Similarity=0.138 Sum_probs=21.8
Q ss_pred HHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCH
Q ss_conf 99998549953999706426788888753225567632200
Q gi|254780498|r 99 AIEAVKKNQAASVVTAGNTGALIAMARLCLSRISGVDRPSL 139 (364)
Q Consensus 99 a~~lvk~g~aDa~VSaGnTGA~la~a~~~lg~i~Gv~RPal 139 (364)
-.+++++-+-|.+||..+..+ .+ .+++-.+..-|..
T Consensus 96 l~~li~~~kPDvII~T~P~~~---l~--~lk~~~~~~iP~~ 131 (388)
T PRK13609 96 LKLLLQAEKPDIVINTFPIIA---VP--ELKKQTGISIPVY 131 (388)
T ss_pred HHHHHHHCCCCEEEECCCHHH---HH--HHHHHCCCCCCEE
T ss_conf 999999829599998887899---99--9998459999889
No 90
>PTZ00217 flap endonuclease-1; Provisional
Probab=27.81 E-value=43 Score=14.16 Aligned_cols=89 Identities=21% Similarity=0.294 Sum_probs=52.0
Q ss_pred HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCEEEEEC---CCCCCCCHHHHHHHHHH-
Q ss_conf 99999985499539997064267888887532255676322001105588984599861---32777898999999999-
Q gi|254780498|r 97 WRAIEAVKKNQAASVVTAGNTGALIAMARLCLSRISGVDRPSLAAFWPTVKGKCIILDV---GATIGSTVSHMVQLSIL- 172 (364)
Q Consensus 97 ~~a~~lvk~g~aDa~VSaGnTGA~la~a~~~lg~i~Gv~RPala~~~Pt~~g~~vllD~---GAN~d~~~~~L~qfA~m- 172 (364)
..|+.|++.|.+||++| -.+-+++-++..+++.+..-. +.+.+..-.++ =-..+-+.++|++|++|
T Consensus 163 aqcA~L~~~g~vdav~S-eD~D~l~fG~p~vlr~l~~s~---------~~k~~~~~i~l~~il~~l~lt~eqfidlcIL~ 232 (394)
T PTZ00217 163 AQCAELVKKGKAWAVAT-EDMDALTFGTPVLLRNLNFSE---------AKKRPIVEIHLDKVLKGLGLSMDQFIDLCILC 232 (394)
T ss_pred HHHHHHHHCCCEEEEEE-CCCCCCCCCCCEEEEECCCCC---------CCCCCEEEEEHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 99999996696579970-442300037866887313466---------66554499889998877499999999999981
Q ss_pred HHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHC
Q ss_conf 999999856899965899840455555657999999997402
Q gi|254780498|r 173 GSFFARSVAGINCPSIGLLNVGTEEIKGNDVLQESARLLRGE 214 (364)
Q Consensus 173 Gs~yak~~~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~ 214 (364)
|+-|...+ |.|| .+.|++|++++
T Consensus 233 GcDY~~~I-----~GIG--------------pk~A~klIk~~ 255 (394)
T PTZ00217 233 GCDYCDTI-----EGIG--------------PKTAYELIKKY 255 (394)
T ss_pred CCCCCCCC-----CCCC--------------HHHHHHHHHHH
T ss_conf 86446899-----8748--------------89999999995
No 91
>pfam03853 YjeF_N YjeF-related protein N-terminus.
Probab=27.71 E-value=43 Score=14.15 Aligned_cols=66 Identities=17% Similarity=0.197 Sum_probs=31.7
Q ss_pred HHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHCCCCCCCEEEECCHHHH
Q ss_conf 999985689996589984045555565799999999740245713200234554532456838997551278
Q gi|254780498|r 175 FFARSVAGINCPSIGLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFIEANDIAKGFVDVIVTEGFSGN 246 (364)
Q Consensus 175 ~yak~~~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~~i~~g~~DVvV~DGFtGN 246 (364)
+.||.+.... -+|-++.++ ++.+.++..+.+++++++.. +.+.-+.+-.+......|||| ||.-|-
T Consensus 46 v~Ar~L~~~g-~~V~v~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~iV-Dal~G~ 111 (170)
T pfam03853 46 AAARHLAQRG-YKVTVLLLN-PDEKLSEDARRALEIAKKLG---GKIVSLNPDEDLSKALADLII-DALFGT 111 (170)
T ss_pred HHHHHHHHCC-CCEEEEEEC-CCCCCCHHHHHHHHHHHHCC---CCEEECCCCCCCCCCCCCEEE-EEEEEC
T ss_conf 9999999879-907999967-85559999999999999869---967615863201256662899-743523
No 92
>COG0119 LeuA Isopropylmalate/homocitrate/citramalate synthases [Amino acid transport and metabolism]
Probab=25.78 E-value=10 Score=18.09 Aligned_cols=57 Identities=19% Similarity=0.156 Sum_probs=30.1
Q ss_pred HHHHCCHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf 997269687087467421614898388998689999999999999607068999999999876752
Q gi|254780498|r 287 VKEGFDPRNFNGGVLLGVDGLVVKGHGSSDAKSIFNVLGIAHNMSQNGFIDMVKDDMQRVRDSLLD 352 (364)
Q Consensus 287 ~~~~~d~~~~gGa~llGl~g~vik~HG~s~~~a~~~ai~~a~~~~~~~~~~~i~~~~~~~~~~~~~ 352 (364)
..+.+||+.. |.....++..-+|...++..-++...-... .+++...+.+.++...+
T Consensus 304 tYE~i~Pe~V------G~~r~~vi~~~~sg~~~~~~~l~~~g~~~~---~~~~~~~~~~vk~l~~~ 360 (409)
T COG0119 304 TYEPIDPEDV------GRRRRIVIGGKHSGRKAVKAKLEELGIELD---EEELDKLFSRVKELADK 360 (409)
T ss_pred HCCCCCHHHC------CCEEEEEEECCCCCHHHHHHHHHHHCCCCC---HHHHHHHHHHHHHHHHH
T ss_conf 5178897892------974226762243445789999998288789---79999999999998763
No 93
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=25.78 E-value=47 Score=13.93 Aligned_cols=130 Identities=18% Similarity=0.214 Sum_probs=63.7
Q ss_pred CCCEEEEEECCHHH--HHHHHH--HHCCCC-CCCCCCCHHHCCCCCCCCEEEEECCCCCCCC-HHHHHHHHHHHHHHHHH
Q ss_conf 99539997064267--888887--532255-6763220011055889845998613277789-89999999999999998
Q gi|254780498|r 106 NQAASVVTAGNTGA--LIAMAR--LCLSRI-SGVDRPSLAAFWPTVKGKCIILDVGATIGST-VSHMVQLSILGSFFARS 179 (364)
Q Consensus 106 g~aDa~VSaGnTGA--~la~a~--~~lg~i-~Gv~RPala~~~Pt~~g~~vllD~GAN~d~~-~~~L~qfA~mGs~yak~ 179 (364)
..+|.+++....-. +...+. -.+-.+ .||+...+.+.-|.. ....++=+|-=.+-| .+.|++ ++++.
T Consensus 141 ~~a~~iI~vS~~~~~~l~~~G~~~~ki~vi~~GvD~~~f~~~~~~~-~~~~il~vGRl~~~KG~~~li~------A~~~l 213 (367)
T cd05844 141 RRAALFIAVSQFIRDRLLALGFPPEKVHVHPIGVDTAKFTPATPAR-RPPRILFVGRFVEKKGPLLLLE------AFARL 213 (367)
T ss_pred HHCCEEEECCHHHHHHHHHCCCCHHHEEEECCCCCHHHCCCCCCCC-CCCEEEEEECCCCCCCHHHHHH------HHHHH
T ss_conf 7269999699999999998598978999977863676469998777-8968999935730007699999------99997
Q ss_pred HCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHCCC--CCCCEEEE----------CCHHHHH
Q ss_conf 56899965899840455555657999999997402457132002345545324--56838997----------5512788
Q gi|254780498|r 180 VAGINCPSIGLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFIEANDIAK--GFVDVIVT----------EGFSGNI 247 (364)
Q Consensus 180 ~~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~~i~~--g~~DVvV~----------DGFtGNi 247 (364)
.. +.|.+-|+=+|..+.+ .++.+.+.++ .- ...+.|.|.+-..++.. ..+||+|. +|| |++
T Consensus 214 -~~-~~p~~~l~ivG~Gp~~-~~l~~~~~~l-~l--~~~V~f~G~~~~~~v~~~l~~adv~v~PS~~~~~g~~Eg~-~~~ 286 (367)
T cd05844 214 -AR-RVPEVRLVIIGDGPLL-AALEALARAL-GL--GGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGL-PVV 286 (367)
T ss_pred -HH-HCCCEEEEEEECCCCH-HHHHHHHHHC-CC--CCCEEECCCCCCHHHHHHHHHCCEEEEEEEECCCCCCCCC-CHH
T ss_conf -96-6869799999888378-9999999970-98--7637877889818899999857879960020377885676-379
Q ss_pred HH
Q ss_conf 99
Q gi|254780498|r 248 AI 249 (364)
Q Consensus 248 ~L 249 (364)
+|
T Consensus 287 ~l 288 (367)
T cd05844 287 LL 288 (367)
T ss_pred HH
T ss_conf 99
No 94
>TIGR01431 adm_rel adenosine deaminase-related growth factor; InterPro: IPR006331 Members of this family have been described as secreted proteins with growth factor activity and regions of adenosine deaminase homology in insects, molluscs, and vertebrates ..
Probab=25.57 E-value=13 Score=17.41 Aligned_cols=34 Identities=24% Similarity=0.249 Sum_probs=22.7
Q ss_pred CHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9687087467421614898388998689999999999
Q gi|254780498|r 292 DPRNFNGGVLLGVDGLVVKGHGSSDAKSIFNVLGIAH 328 (364)
Q Consensus 292 d~~~~gGa~llGl~g~vik~HG~s~~~a~~~ai~~a~ 328 (364)
|+|++.+|+|+-=|-|+||| ||..|+-.|--+.+
T Consensus 397 D~RNHp~a~L~A~~yP~VIS---sDdPa~w~a~pLSy 430 (486)
T TIGR01431 397 DLRNHPVAILLADNYPMVIS---SDDPAFWGAKPLSY 430 (486)
T ss_pred HHCCCCCHHHHHCCCCEEEE---CCCCCCCCCCCCCH
T ss_conf 32001015543268766874---68853345888728
No 95
>TIGR01469 cobA_cysG_Cterm uroporphyrin-III C-methyltransferase; InterPro: IPR006366 This domain is found in a family of sequences that represent enzymes, or enzyme domains, with uroporphyrin-III C-methyltransferase activity. This enzyme catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). Cobalamin contains cobalt while siroheme contains iron. Siroheme is a cofactor for nitrite and sulphite reductases and therefore plays a role in cysteine biosynthesis; many members of this family are CysG, siroheme synthase, with an additional N-terminal domain and with additional oxidation and iron insertion activities.; GO: 0008168 methyltransferase activity, 0006779 porphyrin biosynthetic process.
Probab=24.83 E-value=49 Score=13.82 Aligned_cols=27 Identities=26% Similarity=0.218 Sum_probs=12.0
Q ss_pred HHHCCCCEEEEEECCHHHHHHHHHHHCC
Q ss_conf 9854995399970642678888875322
Q gi|254780498|r 102 AVKKNQAASVVTAGNTGALIAMARLCLS 129 (364)
Q Consensus 102 lvk~g~aDa~VSaGnTGA~la~a~~~lg 129 (364)
|.++|=.=-+| -|=|-|+=+++..-+.
T Consensus 102 L~~~GI~~Evv-PGvTsA~Aa~a~aGiP 128 (242)
T TIGR01469 102 LAEAGIPFEVV-PGVTSAIAAAAYAGIP 128 (242)
T ss_pred HHHCCCCEEEE-CCCCHHHHHHHHCCCC
T ss_conf 99668979873-8811677899855899
No 96
>PRK04163 exosome complex RNA-binding protein Rrp4; Provisional
Probab=24.81 E-value=49 Score=13.81 Aligned_cols=60 Identities=15% Similarity=0.281 Sum_probs=42.0
Q ss_pred HHHHHHHCCHHHCCCEEEEEECCEEEEE-CCCCCHHHHHHHHHHH-HHHHHCCHHHHHHHHHHHHHH
Q ss_conf 9999972696870874674216148983-8899868999999999-999960706899999999987
Q gi|254780498|r 284 LREVKEGFDPRNFNGGVLLGVDGLVVKG-HGSSDAKSIFNVLGIA-HNMSQNGFIDMVKDDMQRVRD 348 (364)
Q Consensus 284 l~~~~~~~d~~~~gGa~llGl~g~vik~-HG~s~~~a~~~ai~~a-~~~~~~~~~~~i~~~~~~~~~ 348 (364)
++.+++. .+--+.+|.||-+-+. .-..+.....+||+.. .+....+|.++|++-|++.+.
T Consensus 166 i~~ik~~-----t~~~I~VG~NG~IWI~g~~~~~~~~a~~aI~~Ie~eah~~gLtd~i~~~l~~~~~ 227 (232)
T PRK04163 166 INMLKEE-----TGCDIIVGQNGRIWIKGKNEEDEELAIEAIKKIEREAHTSGLTDRVKEFLEEEKG 227 (232)
T ss_pred HHHHHHH-----HCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
T ss_conf 9997652-----1958999179789997698889999999999999863003589999999987434
No 97
>COG1083 NeuA CMP-N-acetylneuraminic acid synthetase [Cell envelope biogenesis, outer membrane]
Probab=24.41 E-value=50 Score=13.77 Aligned_cols=143 Identities=14% Similarity=0.016 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHCC-CCEEEEECCHHHHHHHHHHCCCCC--CCEE------------EECCCCCCCCCC------HHHHH
Q ss_conf 77999999998579-917999789899999986269751--5579------------977852017783------06799
Q gi|254780498|r 28 DLILGASKFLEAHP-RIRFLMYGDAKVCLPILDSHPLLK--ERSC------------FHHCEVSIAMDE------RPADA 86 (364)
Q Consensus 28 ~vi~Ga~~al~~~~-~i~iiLvGdee~I~~~l~~~~~~~--~ri~------------Ii~a~~vI~mde------~P~~A 86 (364)
..+.=.+.+....+ --++++--|-+.|....++++... .|.. ++|+.+....++ .|+..
T Consensus 29 pLi~~~I~aA~ns~~fd~VviSsDs~~Il~~A~~ygak~~~~Rp~~LA~D~ast~~~~lh~le~~~~~~~~~~lLq~TsP 108 (228)
T COG1083 29 PLIGYTIEAALNSKLFDKVVISSDSEEILEEAKKYGAKVFLKRPKELASDRASTIDAALHALESFNIDEDTLILLQPTSP 108 (228)
T ss_pred CHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCC
T ss_conf 15899999986588522699847958999999872761102487454167216789999999874424570688406850
Q ss_pred HHHCCCCHHHHHHHHHHHCCCCEEEEEECCHHH-----HHHHH------------HHHCCCCCCCCCCCHHHCCCCC---
Q ss_conf 971376427999999985499539997064267-----88888------------7532255676322001105588---
Q gi|254780498|r 87 LRRGRNVSSMWRAIEAVKKNQAASVVTAGNTGA-----LIAMA------------RLCLSRISGVDRPSLAAFWPTV--- 146 (364)
Q Consensus 87 lR~kK~~SSm~~a~~lvk~g~aDa~VSaGnTGA-----~la~a------------~~~lg~i~Gv~RPala~~~Pt~--- 146 (364)
||+. .-+-.|++...+++.|.++||----. +.... ..--..+|...|+.-+-.+-+.
T Consensus 109 Ll~~---~~ik~A~e~f~~~~~~sl~sa~e~e~~p~k~f~~~~~~~~~~~~~~~~~~rrQ~Lpk~Y~~NgaiYi~~~~~l 185 (228)
T COG1083 109 LLTS---LHIKEAFEKFLNNQYDSLFSAVECEHHPYKAFSLNNGEVKPVNEDPDFETRRQDLPKAYRENGAIYINKKDAL 185 (228)
T ss_pred CCCH---HHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHCCCEEEEHHHHH
T ss_conf 0014---5799999999658876358875322346888875078441011477655421105165653676797527987
Q ss_pred ---------CCCEEEEECCCCCCCCHHHHHHHHHHH
Q ss_conf ---------984599861327778989999999999
Q gi|254780498|r 147 ---------KGKCIILDVGATIGSTVSHMVQLSILG 173 (364)
Q Consensus 147 ---------~g~~vllD~GAN~d~~~~~L~qfA~mG 173 (364)
+-.+..+|--...|-+.+.=+++|.+=
T Consensus 186 ~e~~~~f~~~~~~y~m~~~~~~DID~~~Dl~iae~l 221 (228)
T COG1083 186 LENDCFFIPNTILYEMPEDESIDIDTELDLEIAENL 221 (228)
T ss_pred HHCCCEECCCCEEEECCCCCCCCCCCHHHHHHHHHH
T ss_conf 415754158966898171200056608769999998
No 98
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase; InterPro: IPR010107 This entry represents Glutamate decarboxylase (gad;) it is a pyridoxal 5'-phosphate (PLP)-dependent enzyme, which catalyses the irreversible alpha-decarboxylation of L-glutamate to gamma-aminobutyrate (GABA). This enzyme is widely distributed amongst eukaryotes and prokaryotes, but its function varies in different organisms . Gad has a crucial role in the vertebrate central nervous system where it is responsible for the synthesis of GABA, the major inhibitory neurotransmitter. In the majority of vertebrates Gad occurs in two isoforms, GAD65 and GAD67, both active at neutral pH . Gad isoforms (GadA and GadB) have also been reported in some bacterial species, including the Gram-negative bacterium and Gram-positive bacterium . A unique feature of plant and yeast Gad is the presence of a calmodulin (CaM)-binding domain in the C-terminal region. In Saccharomyces cerevisiae, Gad expression is required for normal oxidative stress tolerance . In plants, Gad is thought to be a stress-adapter chaperonin sensing Ca2+ signals.; GO: 0004351 glutamate decarboxylase activity, 0030170 pyridoxal phosphate binding, 0006536 glutamate metabolic process.
Probab=23.98 E-value=36 Score=14.62 Aligned_cols=65 Identities=23% Similarity=0.253 Sum_probs=45.4
Q ss_pred CHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHH-HHHCCCCHHHHHHH---HHHHCCC---CEEEEEECCHHHHHH
Q ss_conf 9899999986269751557997785201778306799-97137642799999---9985499---539997064267888
Q gi|254780498|r 50 DAKVCLPILDSHPLLKERSCFHHCEVSIAMDERPADA-LRRGRNVSSMWRAI---EAVKKNQ---AASVVTAGNTGALIA 122 (364)
Q Consensus 50 dee~I~~~l~~~~~~~~ri~Ii~a~~vI~mde~P~~A-lR~kK~~SSm~~a~---~lvk~g~---aDa~VSaGnTGA~la 122 (364)
.+++.++++... + ..+.|++||-|.+| --..| +=||.=-+ ..+++.+ |=|+=|.||+-|.|-
T Consensus 61 me~EA~KLm~e~-~---------~KN~ID~dEYPqTar~i~~R-CVnM~a~LfhAp~~~D~~~~savGtsTiGSSEAiML 129 (493)
T TIGR01788 61 MEPEAEKLMDET-L---------NKNMIDKDEYPQTAREIENR-CVNMLADLFHAPALKDEEAASAVGTSTIGSSEAIML 129 (493)
T ss_pred CCHHHHHHHHHC-C---------CCCCCCCCCCCHHHHHHHHC-CEEHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHH
T ss_conf 776789999725-5---------77701100165448988504-301234411478777877566435177325899998
Q ss_pred HHH
Q ss_conf 887
Q gi|254780498|r 123 MAR 125 (364)
Q Consensus 123 ~a~ 125 (364)
+++
T Consensus 130 GGl 132 (493)
T TIGR01788 130 GGL 132 (493)
T ss_pred HHH
T ss_conf 777
No 99
>TIGR02802 Pal_lipo peptidoglycan-associated lipoprotein; InterPro: IPR014169 Members in this entry represent the peptidoglycan-associated lipoprotein (Pal or OprL) protein of the Tol-Pal system. The system appears to be involved both in the maintenance of outer membrane integrity and in the import of certain organic molecules as nutrients. Members of this family contain a hydrodrophobic lipoprotein signal sequence, a conserved N-terminal cleavage and modification site, a poorly conserved low-complexity region, together comprising about 65 amino acids, and a well-conserved C-terminal domain. The entry represents only the conserved C-terminal domain..
Probab=23.41 E-value=52 Score=13.65 Aligned_cols=46 Identities=11% Similarity=0.232 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCH-----------------HHHHHHHHHCCCCCCCEEEEC
Q ss_conf 7779999999985799179997898-----------------999999862697515579977
Q gi|254780498|r 27 RDLILGASKFLEAHPRIRFLMYGDA-----------------KVCLPILDSHPLLKERSCFHH 72 (364)
Q Consensus 27 ~~vi~Ga~~al~~~~~i~iiLvGde-----------------e~I~~~l~~~~~~~~ri~Ii~ 72 (364)
..++..=..+|.++|++.++|=|+- +-++.+|...+...+++++|-
T Consensus 16 ~~~l~~hA~~L~~~p~~~V~iEGH~DERGTrEYNlALGeRRA~AV~~yL~~~GV~~~q~~~vS 78 (104)
T TIGR02802 16 QAILDAHAQYLKKNPSVRVTIEGHTDERGTREYNLALGERRANAVKDYLQAKGVSASQIETVS 78 (104)
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 999999899998679937888630788888777777889999999999997389611004630
No 100
>COG2820 Udp Uridine phosphorylase [Nucleotide transport and metabolism]
Probab=23.20 E-value=52 Score=13.62 Aligned_cols=76 Identities=21% Similarity=0.214 Sum_probs=42.0
Q ss_pred CCEEEEECCHHHHHHHHHHC---CCCC-CC-EEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf 91799978989999998626---9751-55-7997785201778306799971376427999999985499539997064
Q gi|254780498|r 42 RIRFLMYGDAKVCLPILDSH---PLLK-ER-SCFHHCEVSIAMDERPADALRRGRNVSSMWRAIEAVKKNQAASVVTAGN 116 (364)
Q Consensus 42 ~i~iiLvGdee~I~~~l~~~---~~~~-~r-i~Ii~a~~vI~mde~P~~AlR~kK~~SSm~~a~~lvk~g~aDa~VSaGn 116 (364)
.-.+++.||++++..+.+-. .... +| ++...- . -+.+|....-+.=+.-|...|++=++.==++.|+--|.
T Consensus 17 ~~~vilpGdP~R~~~iA~lld~~~~va~~Ref~~~~g--~--~~g~~v~v~StGIGgPSaaIAvEEL~~lGa~tfiRVGT 92 (248)
T COG2820 17 ATLVILPGDPERVEKIAKLLDNPVLVASNREFRTYTG--T--YNGKPVTVCSTGIGGPSAAIAVEELARLGAKTFIRVGT 92 (248)
T ss_pred CCEEEECCCHHHHHHHHHHHCCCHHHHHCCCEEEEEE--E--ECCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEC
T ss_conf 4428814987899999998526011131331588876--8--75818899834889710999999999658817999605
Q ss_pred HHHHH
Q ss_conf 26788
Q gi|254780498|r 117 TGALI 121 (364)
Q Consensus 117 TGA~l 121 (364)
||++-
T Consensus 93 ~Galq 97 (248)
T COG2820 93 TGALQ 97 (248)
T ss_pred CCCCC
T ss_conf 65566
No 101
>pfam05984 Cytomega_UL20A Cytomegalovirus UL20A protein. This family consists of several Cytomegalovirus UL20A proteins. UL20A is thought to be a glycoprotein.
Probab=23.20 E-value=40 Score=14.34 Aligned_cols=21 Identities=24% Similarity=0.404 Sum_probs=16.9
Q ss_pred CHHHCCCCCCCEEEECCHHHH
Q ss_conf 554532456838997551278
Q gi|254780498|r 226 EANDIAKGFVDVIVTEGFSGN 246 (364)
Q Consensus 226 Eg~~i~~g~~DVvV~DGFtGN 246 (364)
.+++=++|..||++|||=-++
T Consensus 60 D~~EdysgdYDVLItdgdGs~ 80 (102)
T pfam05984 60 DDDEDYSGDYDVLITDGDGSE 80 (102)
T ss_pred CCCCCCCCCCCEEEECCCCCC
T ss_conf 875123675347986588877
No 102
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=23.09 E-value=53 Score=13.61 Aligned_cols=57 Identities=18% Similarity=0.141 Sum_probs=30.0
Q ss_pred EEECCC-CCCCCCHHHHHHHHHHHHCCC-CCCCEECCCCHHHCCC------CCCCEEEECCHHHH
Q ss_conf 984045-555565799999999740245-7132002345545324------56838997551278
Q gi|254780498|r 190 LLNVGT-EEIKGNDVLQESARLLRGECC-GAFKYKGFIEANDIAK------GFVDVIVTEGFSGN 246 (364)
Q Consensus 190 LLNiG~-E~~KG~~~~kea~~LL~~~~~-~~~nF~GniEg~~i~~------g~~DVvV~DGFtGN 246 (364)
+|.+|. ++.||-+..-+|++.|.+... -.+.++|.-+-++-+. +-.|-|.-=||+-|
T Consensus 191 il~vgRl~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~G~~~~~l~~~~~~~~l~~~v~f~G~~~d 255 (360)
T cd04951 191 ILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPLRATLERLIKALGLSNRVKLLGLRDD 255 (360)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEECCCCHH
T ss_conf 99984066331157899999999864899799996782567888766776177761542475102
No 103
>PRK07409 threonine synthase; Validated
Probab=22.86 E-value=53 Score=13.58 Aligned_cols=40 Identities=30% Similarity=0.477 Sum_probs=21.5
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHCCCCEEEE--EECCHHHHHHHHH
Q ss_conf 0679997137642799999998549953999--7064267888887
Q gi|254780498|r 82 RPADALRRGRNVSSMWRAIEAVKKNQAASVV--TAGNTGALIAMAR 125 (364)
Q Consensus 82 ~P~~AlR~kK~~SSm~~a~~lvk~g~aDa~V--SaGnTGA~la~a~ 125 (364)
.|.-+.| .|. +++ ++...++...+.+| |+||||+-+++.-
T Consensus 56 nPTGSfK-DRg-a~~--~i~~a~~~g~~~vv~aSsGN~g~s~A~~a 97 (350)
T PRK07409 56 NPTGSFK-DRG-MTM--AVSKAKEEGAKAVICASTGNTSASAAAYA 97 (350)
T ss_pred CCCCCHH-HHH-HHH--HHHHHHHCCCCEEEEECCCHHHHHHHHHH
T ss_conf 9875969-999-999--99999974999899979658999999999
No 104
>PRK13306 ulaD 3-keto-L-gulonate-6-phosphate decarboxylase; Provisional
Probab=22.84 E-value=49 Score=13.78 Aligned_cols=33 Identities=15% Similarity=0.094 Sum_probs=17.3
Q ss_pred CEEEEEEECCCCCCCCHHHHHHHHHHHHH-CCCCEEEEECCH
Q ss_conf 82399997468777817779999999985-799179997898
Q gi|254780498|r 11 NVDTISLDLMGGDLGARDLILGASKFLEA-HPRIRFLMYGDA 51 (364)
Q Consensus 11 ~m~kIAVDaMGGD~~P~~vi~Ga~~al~~-~~~i~iiLvGde 51 (364)
-+.-+|+|.+--|. |....++ .+.+.++=+|.+
T Consensus 4 P~LQvALD~~~l~~--------Al~ia~~~~~~vdiiEvGtp 37 (216)
T PRK13306 4 PLLQVALDNQDLDS--------ALEDAKKVAEEVDIIEVGTI 37 (216)
T ss_pred CEEEEEECCCCHHH--------HHHHHHHHHCCCCEEEECCH
T ss_conf 73899867899999--------99999972322899996859
No 105
>PRK12404 stage V sporulation protein AD; Provisional
Probab=22.49 E-value=54 Score=13.53 Aligned_cols=57 Identities=16% Similarity=0.143 Sum_probs=35.5
Q ss_pred HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCEE
Q ss_conf 799999998549953999706426788888753225567632200110558898459
Q gi|254780498|r 95 SMWRAIEAVKKNQAASVVTAGNTGALIAMARLCLSRISGVDRPSLAAFWPTVKGKCI 151 (364)
Q Consensus 95 Sm~~a~~lvk~g~aDa~VSaGnTGA~la~a~~~lg~i~Gv~RPala~~~Pt~~g~~v 151 (364)
||.+|..+|.-|-||-++.+-++----+--.|...+--|..||--+..--|-.|-++
T Consensus 115 ~L~laa~~vd~g~A~~vla~tSSH~~tAErQFR~P~EyG~QrpptAqWTVTGaGa~i 171 (334)
T PRK12404 115 GLALGASIVNAKGAKYLLTGASSHNTAVEKQFRYPTEYGGQKPPTAQWTVTGAGAAI 171 (334)
T ss_pred HHHHHHHHHHCCCHHHEEEEECCCCHHHHHHCCCCHHCCCCCCCCCCEEEECEEEEE
T ss_conf 999999998466543502320445203665425822116779986627887618999
No 106
>PRK00550 rpsE 30S ribosomal protein S5; Validated
Probab=21.93 E-value=56 Score=13.46 Aligned_cols=33 Identities=21% Similarity=0.232 Sum_probs=25.2
Q ss_pred EEEECCEEEEECCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 742161489838899868999999999999960
Q gi|254780498|r 301 LLGVDGLVVKGHGSSDAKSIFNVLGIAHNMSQN 333 (364)
Q Consensus 301 llGl~g~vik~HG~s~~~a~~~ai~~a~~~~~~ 333 (364)
+.|+.-+..|++|++++.-+..|...|....+.
T Consensus 112 laGI~d~~~K~~Gs~n~~NvvkA~~~aL~~~~t 144 (156)
T PRK00550 112 LAGVHDVLAKSLGSNNPINVVRATFDALKKLRT 144 (156)
T ss_pred HCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 759160576716899788999999999981899
No 107
>PRK05638 threonine synthase; Validated
Probab=21.77 E-value=56 Score=13.44 Aligned_cols=42 Identities=21% Similarity=0.185 Sum_probs=22.3
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHH
Q ss_conf 067999713764279999999854995--3999706426788888753
Q gi|254780498|r 82 RPADALRRGRNVSSMWRAIEAVKKNQA--ASVVTAGNTGALIAMARLC 127 (364)
Q Consensus 82 ~P~~AlR~kK~~SSm~~a~~lvk~g~a--Da~VSaGnTGA~la~a~~~ 127 (364)
.|+-..| .|. + .+++...++--+ -++-|.||+|+-+|+---.
T Consensus 91 NPTGSFK-DRg-~--svavs~A~~~G~~~vv~aStGNagaS~AaYaA~ 134 (443)
T PRK05638 91 NPTGSFR-DRL-A--TVAVSYGLPYASNGFVVASDGNAAASVAAYSAR 134 (443)
T ss_pred CCCCCCH-HHH-H--HHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHH
T ss_conf 9975716-626-9--999999998098836870688889999999998
No 108
>KOG4411 consensus
Probab=21.74 E-value=55 Score=13.48 Aligned_cols=25 Identities=24% Similarity=0.446 Sum_probs=13.1
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 998613277789899999999999999
Q gi|254780498|r 151 IILDVGATIGSTVSHMVQLSILGSFFA 177 (364)
Q Consensus 151 vllD~GAN~d~~~~~L~qfA~mGs~ya 177 (364)
+.||+|+-+++.++|-+. -+|.+|.
T Consensus 145 l~l~agg~~~~~AdhaAs--hlGkA~g 169 (292)
T KOG4411 145 LQLDAGGKVLPMADHAAS--HLGKAYG 169 (292)
T ss_pred HHHHHCCCCCCCHHHHHH--HHHHHHH
T ss_conf 999724712563577898--8768889
No 109
>cd06303 PBP1_LuxPQ_Quorum_Sensing Periplasmic binding protein (LuxP) of autoinducer-2 (AI-2) receptor LuxPQ from Vibrio harveyi and its close homologs. Periplasmic binding protein (LuxP) of autoinducer-2 (AI-2) receptor LuxPQ from Vibrio harveyi and its close homologs from other bacteria. The members of this group are highly homologous to a family of periplasmic pentose/hexose sugar-binding proteins that function as the primary receptors for chemotaxis and transport of many sugar based solutes in bacteria and archaea, and that are members of the type I periplasmic binding protein superfamily. The Vibrio harveyi AI-2 receptor consists of two polypeptides, LuxP and LuxQ: LuxP is a periplasmic binding protein that binds AI-2 by clamping it between two domains, LuxQ is an integral membrane protein belonging to the two-component sensor kinase family. Unlike AI-2 bound to the LsrB receptor in Salmonella typhimurium, the Vibrio harveyi AI-2 signaling molecule has an unusual furanosyl borate
Probab=21.63 E-value=56 Score=13.42 Aligned_cols=29 Identities=17% Similarity=0.150 Sum_probs=14.6
Q ss_pred CCCCEEEEEECCHHHHHHHHHHHCCCCCC
Q ss_conf 49953999706426788888753225567
Q gi|254780498|r 105 KNQAASVVTAGNTGALIAMARLCLSRISG 133 (364)
Q Consensus 105 ~g~aDa~VSaGnTGA~la~a~~~lg~i~G 133 (364)
..+.+.+|+.-|-.+--.++.++.+++++
T Consensus 102 ~~~p~~yvg~Dn~~gg~~~a~~l~~~lg~ 130 (280)
T cd06303 102 KHQPLLYVGFDHAAGARLLADYFIKRYPN 130 (280)
T ss_pred CCCCCEEECCCHHHHHHHHHHHHHHHCCC
T ss_conf 46875587076399999999999997599
No 110
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=21.27 E-value=57 Score=13.38 Aligned_cols=111 Identities=17% Similarity=0.055 Sum_probs=50.2
Q ss_pred CCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHCC--CCCCCEEEECCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 96589984045555565799999999740245713200234554532--4568389975512788999988889999999
Q gi|254780498|r 185 CPSIGLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFIEANDIA--KGFVDVIVTEGFSGNIAIKAAEGAVRHISGV 262 (364)
Q Consensus 185 ~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~~i~--~g~~DVvV~DGFtGNi~LKt~EG~~~~~~~~ 262 (364)
.|.+-|+=+|+.+..-.+..++..+-+.- ..++.|.|++...++. -..+||+|.=-. .||....+...
T Consensus 232 ~~~~~l~ivG~g~~~~~~~~~~~~~~~~l--~~~V~f~G~~~~~~~~~~~~~adi~v~pS~--------~Egf~~~~lEA 301 (375)
T cd03821 232 FPDWHLVIAGPDEGGYRAELKQIAAALGL--EDRVTFTGMLYGEDKAAALADADLFVLPSH--------SENFGIVVAEA 301 (375)
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHCC--CCEEEECCCCCCHHHHHHHHHCCEECCCCH--------HHHHHHHHHHH
T ss_conf 79859999978982678999999998267--855853477683110989851500146847--------76645899999
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 9986322208899999989999999972696870874674216148983889986899999999999
Q gi|254780498|r 263 LQKSLNRTLLSRIGCLLIKKSLREVKEGFDPRNFNGGVLLGVDGLVVKGHGSSDAKSIFNVLGIAHN 329 (364)
Q Consensus 263 lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~~~gGa~llGl~g~vik~HG~s~~~a~~~ai~~a~~ 329 (364)
+-... |.+ -...||..-+--++.....- .+..+++.+|....+
T Consensus 302 ma~G~--------------PvI--------as~~gg~~eii~~~~g~~~~--~~~~~l~~~i~~l~~ 344 (375)
T cd03821 302 LACGT--------------PVV--------TTDKVPWQELIEYGCGWVVD--DDVDALAAALRRALE 344 (375)
T ss_pred HHCCC--------------CEE--------ECCCCCCHHEEECCCEEEEC--CCHHHHHHHHHHHHC
T ss_conf 98599--------------999--------92799807728788489949--299999999999976
No 111
>KOG0362 consensus
Probab=21.18 E-value=58 Score=13.36 Aligned_cols=67 Identities=21% Similarity=0.290 Sum_probs=44.0
Q ss_pred CCCEEEEEE----CCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCH--HHCCCCCCCEEEECCHHHHHHHHHHHH
Q ss_conf 996589984----04555556579999999974024571320023455--453245683899755127889999888
Q gi|254780498|r 184 NCPSIGLLN----VGTEEIKGNDVLQESARLLRGECCGAFKYKGFIEA--NDIAKGFVDVIVTEGFSGNIAIKAAEG 254 (364)
Q Consensus 184 ~~PrVgLLN----iG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg--~~i~~g~~DVvV~DGFtGNi~LKt~EG 254 (364)
+.-||++-+ +-.-|.||+-+.+.|.+|+.=+...+ + -+|. .+|..-.++||||+|-+|.+.|-....
T Consensus 230 k~arvAvf~cP~d~~~TEtkgTvLi~~A~el~~FSKgEe-~---lle~~vk~Ia~~gvkViV~~g~v~em~Lhflnk 302 (537)
T KOG0362 230 KDARVAVFACPFDIAQTETKGTVLLKNAKELLNFSKGEE-A---LLEEQVKAIADAGVKVIVSGGKVDEMTLHFLNK 302 (537)
T ss_pred CCCEEEEEECCCCCCCCCCCCEEEECCCHHHHHHCCCCH-H---HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCC
T ss_conf 133257874688755456764041058576664253648-8---999999999855980998557321666445435
No 112
>TIGR01885 Orn_aminotrans ornithine--oxo-acid transaminase; InterPro: IPR010164 Ornithine aminotransferase catalyses the conversion of L-ornithine and a 2-oxo acid to L-glutamate 5-semialdehyde and an L-amino acid. This enzyme is found in low-GC bacteria, where it is responsible for the fourth step in arginine biosynthesis, and in the mitochondrial matrix of eukaryotes, where it controls L-ornithine levels in tissues. In human hereditary ornithine aminotransferase deficiency, the elevated levels of intraocular concentrations of ornithine are responsible for gyrate atrophy, which affects the CNS and peripheral nervous system ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding.
Probab=21.05 E-value=58 Score=13.35 Aligned_cols=67 Identities=18% Similarity=0.315 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHCCCCCCCEEEECC-
Q ss_conf 9999999999999998568999658998404555556579999999974024571320023455453245683899755-
Q gi|254780498|r 164 SHMVQLSILGSFFARSVAGINCPSIGLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFIEANDIAKGFVDVIVTEG- 242 (364)
Q Consensus 164 ~~L~qfA~mGs~yak~~~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~~i~~g~~DVvV~DG- 242 (364)
+.|.+|+.. .+ .++|-+--+|=.+|-|+ |.+-.|+||=|.-. | |-..|..+++.+|+|.|
T Consensus 84 d~lg~~~~~---~t-~LfgGk~~~vL~mNTGa------EAvEtA~KLAR~Wg-----Y----~~K~ip~~kA~ii~~~GN 144 (426)
T TIGR01885 84 DVLGEFAKY---LT-KLFGGKYEKVLPMNTGA------EAVETALKLARKWG-----Y----EVKGIPRNKAKIIAASGN 144 (426)
T ss_pred CHHHHHHHH---HH-HHCCCCCCEEECCCCCH------HHHHHHHHHHHHHC-----C----CCCCCCCCCEEEEEECCC
T ss_conf 035789999---99-75499510560456873------47999999999744-----1----357855762389985388
Q ss_pred HHHHHHH
Q ss_conf 1278899
Q gi|254780498|r 243 FSGNIAI 249 (364)
Q Consensus 243 FtGNi~L 249 (364)
|.|-.+.
T Consensus 145 FhGRTlg 151 (426)
T TIGR01885 145 FHGRTLG 151 (426)
T ss_pred CCCHHHH
T ss_conf 7330354
No 113
>pfam03719 Ribosomal_S5_C Ribosomal protein S5, C-terminal domain.
Probab=20.94 E-value=58 Score=13.33 Aligned_cols=32 Identities=19% Similarity=0.226 Sum_probs=23.9
Q ss_pred EEEECCEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 74216148983889986899999999999996
Q gi|254780498|r 301 LLGVDGLVVKGHGSSDAKSIFNVLGIAHNMSQ 332 (364)
Q Consensus 301 llGl~g~vik~HG~s~~~a~~~ai~~a~~~~~ 332 (364)
+.|++-+..|++|+.++.-+..|...|....+
T Consensus 33 ~aGikDi~sK~~Gs~n~~N~~kAt~~AL~~~~ 64 (74)
T pfam03719 33 LAGIKDVLAKSLGSRNPINVVKATFDALKKLR 64 (74)
T ss_pred HCCCCCEEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 83926403453788977889999999999079
No 114
>COG0205 PfkA 6-phosphofructokinase [Carbohydrate transport and metabolism]
Probab=20.37 E-value=60 Score=13.26 Aligned_cols=109 Identities=17% Similarity=0.070 Sum_probs=57.6
Q ss_pred CEEEEEEECCCCCCCCH--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHH
Q ss_conf 82399997468777817--7799999999857991799978989999998626975155799778520177830679997
Q gi|254780498|r 11 NVDTISLDLMGGDLGAR--DLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVSIAMDERPADALR 88 (364)
Q Consensus 11 ~m~kIAVDaMGGD~~P~--~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~vI~mde~P~~AlR 88 (364)
.|.||||=.-|||- |. .+|.|....+... +.+++-+ .+=.+-++...-. .+....-...+.+.=++.-.-|
T Consensus 1 ~~kkIaIlTSGGda-PGmNa~Iravvr~a~~~-g~eV~Gi--~~Gy~GL~~~~i~---~l~~~~v~~~~~~GGT~lgssr 73 (347)
T COG0205 1 MMKKIAILTSGGDA-PGMNAVIRAVVRTAIKE-GLEVFGI--YNGYLGLLEGDIK---PLTREDVDDLINRGGTFLGSAR 73 (347)
T ss_pred CCCEEEEECCCCCC-CCHHHHHHHHHHHHHHC-CCEEEEE--ECCHHHHCCCCCE---ECCHHHHHHHHHCCCEEEEECC
T ss_conf 98369998468898-30769999999999976-9789999--4332342078612---1442014679865986875478
Q ss_pred HCCC--CHHHHHHHHHHHCCCCEEEEEEC----CHHHHHHHHHH
Q ss_conf 1376--42799999998549953999706----42678888875
Q gi|254780498|r 89 RGRN--VSSMWRAIEAVKKNQAASVVTAG----NTGALIAMARL 126 (364)
Q Consensus 89 ~kK~--~SSm~~a~~lvk~g~aDa~VSaG----nTGA~la~a~~ 126 (364)
..+. +.---++++-+++-..|++|-.| +|||...+..+
T Consensus 74 ~~~~~~~e~~~~~~~~l~~~gId~LvvIGGDGS~~gA~~Lae~~ 117 (347)
T COG0205 74 FPEFKTEEGRKVAAENLKKLGIDALVVIGGDGSYTGAALLAEEG 117 (347)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHC
T ss_conf 88765677999999999983998899978887389999999735
No 115
>KOG0816 consensus
Probab=20.32 E-value=57 Score=13.40 Aligned_cols=25 Identities=4% Similarity=0.097 Sum_probs=14.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 1777999999998579917999789
Q gi|254780498|r 26 ARDLILGASKFLEAHPRIRFLMYGD 50 (364)
Q Consensus 26 P~~vi~Ga~~al~~~~~i~iiLvGd 50 (364)
-+.+++++-.++.++|.+.++=+-+
T Consensus 23 K~~i~~~ir~~vd~Y~~v~Vf~~~n 47 (223)
T KOG0816 23 KEAIVEEIREAVDKYPYVFVFEVPN 47 (223)
T ss_pred HHHHHHHHHHHHHHCCEEEEEECCC
T ss_conf 9878999999986287489997288
No 116
>KOG4667 consensus
Probab=20.19 E-value=60 Score=13.23 Aligned_cols=145 Identities=19% Similarity=0.193 Sum_probs=80.5
Q ss_pred CCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCC--CCCEECCCCHHHCCC----------------------CCCCEEE
Q ss_conf 9965899840455555657999999997402457--132002345545324----------------------5683899
Q gi|254780498|r 184 NCPSIGLLNVGTEEIKGNDVLQESARLLRGECCG--AFKYKGFIEANDIAK----------------------GFVDVIV 239 (364)
Q Consensus 184 ~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~--~~nF~GniEg~~i~~----------------------g~~DVvV 239 (364)
..-.+.+|--|..++|-...-+.-.+.|.+...+ .|+|-||=|..+-|. -.+|||+
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~vi~ 110 (269)
T KOG4667 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVPVIL 110 (269)
T ss_pred CCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 88339999504544541589999999998637248999855787767740467663227789999998606766788998
Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHH---HHHCCCHHHHHHHHHHHHHHHHHHHH------------------------CC
Q ss_conf 7551278899998888999999999---86322208899999989999999972------------------------69
Q gi|254780498|r 240 TEGFSGNIAIKAAEGAVRHISGVLQ---KSLNRTLLSRIGCLLIKKSLREVKEG------------------------FD 292 (364)
Q Consensus 240 ~DGFtGNi~LKt~EG~~~~~~~~lk---~~~~~~~~~~~~~~l~~~~l~~~~~~------------------------~d 292 (364)
.--=-||++|+-++-... +...+- +..-+++. .-.+-+..+++++++ ++
T Consensus 111 gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I---~eRlg~~~l~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLn 186 (269)
T KOG4667 111 GHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGI---NERLGEDYLERIKEQGFIDVGPRKGKYGYRVTEESLMDRLN 186 (269)
T ss_pred EECCCCHHHHHHHHHHCC-CHHEEECCCCCCHHCCH---HHHHCCCHHHHHHHCCCEECCCCCCCCCCEECHHHHHHHHH
T ss_conf 506752899998876058-02368745641201126---65513328999985884305765698672642788887872
Q ss_pred HHHCCCEEEEEECCEEEEECCCCCHH-HHHHHHHHHHHHHH
Q ss_conf 68708746742161489838899868-99999999999996
Q gi|254780498|r 293 PRNFNGGVLLGVDGLVVKGHGSSDAK-SIFNVLGIAHNMSQ 332 (364)
Q Consensus 293 ~~~~gGa~llGl~g~vik~HG~s~~~-a~~~ai~~a~~~~~ 332 (364)
.+-+-..+=+--.-.|.-+||+-|.. .+.+|=+.|..+-.
T Consensus 187 td~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~n 227 (269)
T KOG4667 187 TDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN 227 (269)
T ss_pred CHHHHHHCCCCCCCCEEEEECCCCCEEECHHHHHHHHHCCC
T ss_conf 30436634867667169984367836661547999985668
No 117
>KOG1205 consensus
Probab=20.10 E-value=61 Score=13.22 Aligned_cols=10 Identities=10% Similarity=0.125 Sum_probs=7.9
Q ss_pred HCCCCEEEEE
Q ss_conf 5499539997
Q gi|254780498|r 104 KKNQAASVVT 113 (364)
Q Consensus 104 k~g~aDa~VS 113 (364)
.-|.+|.+|.
T Consensus 88 ~fg~vDvLVN 97 (282)
T KOG1205 88 HFGRVDVLVN 97 (282)
T ss_pred HCCCCCEEEE
T ss_conf 6588888984
Done!