Query         gi|254780498|ref|YP_003064911.1| putative glycerol-3-phosphate acyltransferase PlsX [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 364
No_of_seqs    153 out of 1524
Neff          5.7 
Searched_HMMs 13730
Date          Wed Jun  1 10:50:28 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780498.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1vi1a_ c.77.1.4 (A:) Fatty ac 100.0       0       0  833.4  35.2  331   12-348     1-332 (334)
  2 d1u7na_ c.77.1.4 (A:) Fatty ac 100.0       0       0  829.4  34.7  325   13-344     1-329 (329)
  3 d1vmia_ c.77.1.5 (A:) Ethanola 100.0   3E-31 2.2E-35  214.1  24.2  277    7-328    15-326 (329)
  4 d1xcoa_ c.77.1.5 (A:) Phosphot 100.0   3E-26 2.2E-30  182.6  24.4  278    7-329    12-321 (324)
  5 d1r5ja_ c.77.1.5 (A:) Phosphot 100.0 2.7E-26   2E-30  182.8  21.8  283    6-332    12-327 (329)
  6 d2af4c1 c.77.1.5 (C:2-333) Pho  99.9   4E-25 2.9E-29  175.5  23.4  278   10-333    13-329 (332)
  7 d1ptma_ c.77.1.3 (A:) 4-hydrox  98.6 8.1E-06 5.9E-10   53.7  17.6  266   12-334     4-328 (329)
  8 d1qgoa_ c.92.1.2 (A:) Cobalt c  69.4     2.7  0.0002   18.8   4.0   33   15-47      4-39  (257)
  9 d1kzyc2 c.15.1.4 (C:1867-1972)  67.1     1.8 0.00013   20.0   2.6   27  226-252    42-69  (106)
 10 d2pjua1 c.92.3.1 (A:11-196) Pr  55.2       4 0.00029   17.8   2.7  108   99-249    43-157 (186)
 11 d2ja9a2 d.51.1.1 (A:152-236) R  51.9     4.5 0.00033   17.4   2.6   58  283-345    23-82  (85)
 12 d1su7a_ e.26.1.2 (A:) Ni-conta  43.5     8.4 0.00062   15.7   8.1   86  157-242   196-328 (633)
 13 d1wu2a3 c.57.1.2 (A:181-324) M  41.6     5.9 0.00043   16.7   1.8   12  107-118    70-81  (144)
 14 d1je0a_ c.56.2.1 (A:) 5'-deoxy  34.1      10 0.00074   15.3   2.1   73   44-120    14-91  (234)
 15 d1odka_ c.56.2.1 (A:) Purine n  33.4     9.3 0.00068   15.5   1.8   97   44-164    15-116 (234)
 16 d1jqka_ e.26.1.2 (A:) Ni-conta  31.6      13 0.00095   14.6   7.2   86  157-242   176-309 (610)
 17 d1gmla_ c.8.5.2 (A:) Thermosom  31.3      13 0.00096   14.5   4.7   65  182-251    22-93  (168)
 18 d1q3qa2 c.8.5.2 (A:217-369) Th  30.4      14 0.00099   14.4   5.0   58  181-250    16-87  (153)
 19 d1uz5a3 c.57.1.2 (A:181-328) M  29.4      11 0.00083   14.9   1.7   84   96-184    56-146 (148)
 20 d2ftsa3 c.57.1.2 (A:499-653) G  29.0      10 0.00076   15.2   1.4   77  107-187    66-155 (155)
 21 d1qe5a_ c.56.2.1 (A:) Purine n  28.6      15  0.0011   14.2   4.3   25   25-50      9-38  (266)
 22 d2f9fa1 c.87.1.8 (A:2-167) Fir  25.2      17  0.0012   13.9   2.1   76  155-244    18-96  (166)
 23 d2uube1 d.14.1.1 (E:74-154) Ri  23.3      18  0.0013   13.7   1.8   33  301-333    39-71  (81)
 24 d2nn6g3 d.51.1.1 (G:195-274) R  22.4     8.6 0.00062   15.7  -0.0   44  283-331    22-66  (80)
 25 d1assa_ c.8.5.2 (A:) Thermosom  22.1      14  0.0011   14.3   1.1   64  182-250    18-88  (152)

No 1  
>d1vi1a_ c.77.1.4 (A:) Fatty acid/phospholipid synthesis protein PlsX {Bacillus subtilis [TaxId: 1423]}
Probab=100.00  E-value=0  Score=833.41  Aligned_cols=331  Identities=33%  Similarity=0.602  Sum_probs=321.6

Q ss_pred             EEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHCC
Q ss_conf             23999974687778177799999999857991799978989999998626975155799778520177830679997137
Q gi|254780498|r   12 VDTISLDLMGGDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVSIAMDERPADALRRGR   91 (364)
Q Consensus        12 m~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~vI~mde~P~~AlR~kK   91 (364)
                      .||||||+||||++|.++|+|+..|++++|+++|+||||+++|++++++.   .++++|+||+++|+|+|+|+.|+|+||
T Consensus         1 sirIAvDaMGGD~~P~~~v~Ga~~al~~~~~~~i~LvG~~~~i~~~l~~~---~~~i~Ivha~~~I~m~d~p~~alr~kk   77 (334)
T d1vi1a_           1 SLRIAVDAMGGDHAPKAVIDGVIKGIEAFDDLHITLVGDKTTIESHLTTT---SDRITVLHADEVIEPTDEPVRAVRRKK   77 (334)
T ss_dssp             CEEEEEESSCSSSTTHHHHHHHHHHHHHCTTEEEEEEECHHHHHTTCCSC---CTTEEEEECCBCCCTTSCHHHHHHHCT
T ss_pred             CEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHC---CCCEEEECCCCCCCCCCCHHHHHHHCC
T ss_conf             95999981487658288999999999878898699995899999998537---366499838873158862257888443


Q ss_pred             CCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCC-EEEEECCCCCCCCHHHHHHHH
Q ss_conf             6427999999985499539997064267888887532255676322001105588984-599861327778989999999
Q gi|254780498|r   92 NVSSMWRAIEAVKKNQAASVVTAGNTGALIAMARLCLSRISGVDRPSLAAFWPTVKGK-CIILDVGATIGSTVSHMVQLS  170 (364)
Q Consensus        92 ~~SSm~~a~~lvk~g~aDa~VSaGnTGA~la~a~~~lg~i~Gv~RPala~~~Pt~~g~-~vllD~GAN~d~~~~~L~qfA  170 (364)
                      + ||||+|+++||+|++|++||||||||+|+.+++++||||||+||||+++|||.++. ++|||+|||+||+|++|+|||
T Consensus        78 ~-SSm~~a~~lvk~g~ada~VSaGnTGAl~a~a~~~l~~i~gi~RPaia~~~Pt~~g~~~vllD~GAN~~~~~~~L~qFA  156 (334)
T d1vi1a_          78 N-SSMVLMAQEVAENRADACISAGNTGALMTAGLFIVGRIKGIDRPALAPTLPTVSGDGFLLLDVGANVDAKPEHLVQYA  156 (334)
T ss_dssp             T-BHHHHHHHHHHTTSCSEEEECSCHHHHHHHHHHTTCBCTTCSSCEEECEECCSSSCCEEEECSSSCSSCCHHHHHHHH
T ss_pred             C-CHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHEECCCCCCCCEEEECCCCCCCCCHHHHHHHH
T ss_conf             3-159999998641455727853675455765876675312431003330177777876289717867678819999999


Q ss_pred             HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHCCCCCCCEEEECCHHHHHHHH
Q ss_conf             99999999856899965899840455555657999999997402457132002345545324568389975512788999
Q gi|254780498|r  171 ILGSFFARSVAGINCPSIGLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFIEANDIAKGFVDVIVTEGFSGNIAIK  250 (364)
Q Consensus       171 ~mGs~yak~~~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~~i~~g~~DVvV~DGFtGNi~LK  250 (364)
                      +||++|+|.++++++|||||||||+|++||++++|+||+||++..  +|||+|||||+|||+|.+||||||||||||+||
T Consensus       157 ~mG~~ya~~~~~~~~P~VgLLNiG~E~~KG~~~~k~a~~lL~~~~--~~nf~GniEg~di~~g~~DVvV~DGFtGNv~LK  234 (334)
T d1vi1a_         157 IMGSVYSQQVRGVTSPRVGLLNVGTEDKKGNELTKQTFQILKETA--NINFIGNVEARDLLDDVADVVVTDGFTGNVTLK  234 (334)
T ss_dssp             HHHHHHHHHTSCCSSCEEEEEESSSSTTCSCHHHHHHHHHHHSCT--TSEEEEEEEGGGGGGTSCSEEECCHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCC--CCCEEEEECCEECCCCCEEEEEECCCHHHHHHH
T ss_conf             999999998489754346764044556664378999998753137--844266522200247836899975600457877


Q ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf             98888999999999863222088999999899999999726968708746742161489838899868999999999999
Q gi|254780498|r  251 AAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFDPRNFNGGVLLGVDGLVVKGHGSSDAKSIFNVLGIAHNM  330 (364)
Q Consensus       251 t~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~~~gGa~llGl~g~vik~HG~s~~~a~~~ai~~a~~~  330 (364)
                      |+||+++++.++||++++++++++++++++++.|+++++++||++|||||||||||+||||||+|+++||+|||++|.++
T Consensus       235 t~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~l~~~~d~~~~gGa~lLGlng~vik~HG~S~~~ai~nAI~~a~~~  314 (334)
T d1vi1a_         235 TLEGSALSIFKMMRDVMTSTLTSKLAAAVLKPKLKEMKMKMEYSNYGGASLFGLKAPVIKAHGSSDSNAVFRAIRQAREM  314 (334)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTC-------CCHHHHHHHHHHHCGGGSCCEEEETBSSCEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             HHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHHHHH
T ss_conf             62115889999999876122266788887899999998757901039868971682189927999989999999999999


Q ss_pred             HHCCHHHHHHHHHHHHHH
Q ss_conf             960706899999999987
Q gi|254780498|r  331 SQNGFIDMVKDDMQRVRD  348 (364)
Q Consensus       331 ~~~~~~~~i~~~~~~~~~  348 (364)
                      ++++++++|++++++.++
T Consensus       315 v~~~~~~~i~~~l~~~~~  332 (334)
T d1vi1a_         315 VSQNVAALIQEEVKEEKT  332 (334)
T ss_dssp             HHTTHHHHHHHHTSHHHH
T ss_pred             HHHCHHHHHHHHHHHHCC
T ss_conf             986889999999975203


No 2  
>d1u7na_ c.77.1.4 (A:) Fatty acid/phospholipid synthesis protein PlsX {Enterococcus faecalis [TaxId: 1351]}
Probab=100.00  E-value=0  Score=829.35  Aligned_cols=325  Identities=31%  Similarity=0.558  Sum_probs=313.2

Q ss_pred             EEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCC
Q ss_conf             39999746877781777999999998579917999789899999986269751557997785201778306799971376
Q gi|254780498|r   13 DTISLDLMGGDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVSIAMDERPADALRRGRN   92 (364)
Q Consensus        13 ~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~vI~mde~P~~AlR~kK~   92 (364)
                      ||||||+||||++|+++|+|+..|++++|+++|+|||++++|++++.++    +|++|+||+++|+|+|+|+.|+|+||+
T Consensus         1 mrIAvDaMGGD~gP~~~v~Ga~~al~~~~d~~i~LvG~e~~i~~~l~~~----~~l~Ivha~~~I~mdd~P~~alR~kk~   76 (329)
T d1u7na_           1 MKIAVDAMGGDNAPQAIVEGVMLAKQDFPDIEFQLYGKEAEIKKYITDE----KNITIIHTDEKIASDDEPVKAIRRKKT   76 (329)
T ss_dssp             CEEEEESSCSTTTTHHHHHHHHHHHHHCTTCEEEEEECHHHHHTTCSCC----TTEEEEECSCCCCTTCCHHHHHHHCTT
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHCCC----CCEEEEECCCCCCCCCCHHHHHHHCCC
T ss_conf             9899981587658088999999999878897799993999999875325----780899689863689877789874234


Q ss_pred             CHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCC---CCEEEEECCCCCCCCHHHHHHH
Q ss_conf             4279999999854995399970642678888875322556763220011055889---8459986132777898999999
Q gi|254780498|r   93 VSSMWRAIEAVKKNQAASVVTAGNTGALIAMARLCLSRISGVDRPSLAAFWPTVK---GKCIILDVGATIGSTVSHMVQL  169 (364)
Q Consensus        93 ~SSm~~a~~lvk~g~aDa~VSaGnTGA~la~a~~~lg~i~Gv~RPala~~~Pt~~---g~~vllD~GAN~d~~~~~L~qf  169 (364)
                       ||||+|+++||+|++||+||||||||+|++++++|||+|||+||||++.|||.+   ++++|||+|||+||+|++|+||
T Consensus        77 -SSm~~a~~lvk~g~ada~VSaGnTGAl~a~a~~~l~~i~gv~RPaia~~~Pt~~~~~~~~~llD~GAN~~~~~~~L~qF  155 (329)
T d1u7na_          77 -ASMVLAAQAVKNGEADAIFSAGNTGALLAAGLFIVGRIKNVERPGLMSTLPVMGEPDKGFDMLDLGANADNKPEHLVQY  155 (329)
T ss_dssp             -SHHHHHHHHHHHTSCSEEEESSCHHHHHHHHHHTTCBCTTCSSCEEEEEEECTTCTTCEEEEECSSSCSCCCHHHHHHH
T ss_pred             -CHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEHHCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHH
T ss_conf             -2488999998743355675437875257652001134256431024575566678888559996787877798999999


Q ss_pred             HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHCCCCCCCEEEECCHHHHHHH
Q ss_conf             99999999985689996589984045555565799999999740245713200234554532456838997551278899
Q gi|254780498|r  170 SILGSFFARSVAGINCPSIGLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFIEANDIAKGFVDVIVTEGFSGNIAI  249 (364)
Q Consensus       170 A~mGs~yak~~~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~~i~~g~~DVvV~DGFtGNi~L  249 (364)
                      |+||++|+|.++++++|||||||||+|++||++++|+||+||+++.  .+||+|||||+|||+|++||||||||||||+|
T Consensus       156 A~mG~~ya~~v~~~~~P~VgLLNiG~E~~KG~~~~k~a~~lL~~~~--~~nf~GnvEg~di~~g~~DVvV~DGFtGNi~L  233 (329)
T d1u7na_         156 AVLGSFYAEKVRNVQNPRVGLLNNGTEETKGSELTKKAFELLAADE--TINFVGNVEARELLNGVADVVVTDGFTGNAVL  233 (329)
T ss_dssp             HHHHHHHHHHTTCCSSCCEEEECSCC----CCHHHHHHHHHHHHCT--TSCEEEEECGGGGGGCSCSEEECCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCEEEEECCHHHHCCCCHHHHHHHHHHHHCC--CCCEEEEECCCCCCCCCCCEEEECCHHHHHHH
T ss_conf             9998889998389854347663242321024699999999863135--86504662376355886658997441124999


Q ss_pred             HHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf             998888999999999863-2220889999998999999997269687087467421614898388998689999999999
Q gi|254780498|r  250 KAAEGAVRHISGVLQKSL-NRTLLSRIGCLLIKKSLREVKEGFDPRNFNGGVLLGVDGLVVKGHGSSDAKSIFNVLGIAH  328 (364)
Q Consensus       250 Kt~EG~~~~~~~~lk~~~-~~~~~~~~~~~l~~~~l~~~~~~~d~~~~gGa~llGl~g~vik~HG~s~~~a~~~ai~~a~  328 (364)
                      ||+||+++++++.||+++ .+++.++++++++++.|++++++|||++|||||||||||+|||+||+|+++||+|||++|.
T Consensus       234 Kt~EG~~~~i~~~lk~~~~~~~~~~~~g~ll~~~~l~~~~~~~d~~~~gGa~lLGl~g~vik~HG~S~~~a~~nAI~~a~  313 (329)
T d1u7na_         234 KSIEGTAMNMMSLLKTAILSEGVKGKMGALLLKNALHGMKDEMDYSKHGGAVLFGLKAPVIKTHGATGPDAVRYTIRQIH  313 (329)
T ss_dssp             HHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHTCGGGGCCEEEETBSSCEEECCTTCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCCCCHHHHHHHHHHHH
T ss_conf             98767999999999998720225667789999999999987689000798889748831898378999899999999999


Q ss_pred             HHHHCCHHHHHHHHHH
Q ss_conf             9996070689999999
Q gi|254780498|r  329 NMSQNGFIDMVKDDMQ  344 (364)
Q Consensus       329 ~~~~~~~~~~i~~~~~  344 (364)
                      ++++++++++|++.++
T Consensus       314 ~~~~~~~~~~i~~~~e  329 (329)
T d1u7na_         314 TMLETQVVPQLVEYYE  329 (329)
T ss_dssp             HHHHTTHHHHHHHHHC
T ss_pred             HHHHHCHHHHHHHHHC
T ss_conf             9998586999999729


No 3  
>d1vmia_ c.77.1.5 (A:) Ethanolamine utilization protein EutD {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=3e-31  Score=214.13  Aligned_cols=277  Identities=14%  Similarity=0.116  Sum_probs=215.8

Q ss_pred             CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHH
Q ss_conf             13898239999746877781777999999998579917999789899999986269751557997785201778306799
Q gi|254780498|r    7 LQGGNVDTISLDLMGGDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVSIAMDERPADA   86 (364)
Q Consensus         7 ~~~~~m~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~vI~mde~P~~A   86 (364)
                      +...+..||.+ +=|-   -+.+++++..+.++. -.+.+|+|++++|+..++++++..+.++|+|+.+...+.+.....
T Consensus        15 ~a~~~pkrIvf-~Ege---d~rvl~Aa~~~~~eg-i~~pILvG~~~~I~~~~~~~~l~l~~ieIIdp~~~~~~~~~~~~~   89 (329)
T d1vmia_          15 LALRAPARVVF-PDAL---DQRVLKAAQYLHQQG-LATPILVANPFELRQFALSHGVAMDGLQVIDPHGNLAMREEFAHR   89 (329)
T ss_dssp             GGGSCCCEEEE-SCCS---SHHHHHHHHHHHHTT-SCEEEEESCHHHHHHHHHHHTCCCTTCEEECTTSCHHHHHHHHHH
T ss_pred             HHHHCCCEEEE-CCCC---CHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHH
T ss_conf             98757998997-5879---989999999999879-968999858999999999769997777898566667778999999


Q ss_pred             H-------------HHCCCCHHHHHHHHHHHCCCCEEEEEE--CCHHHHHHHHHHHCCCCCCCCCCCHHHCC-CC-CCCC
Q ss_conf             9-------------713764279999999854995399970--64267888887532255676322001105-58-8984
Q gi|254780498|r   87 L-------------RRGRNVSSMWRAIEAVKKNQAASVVTA--GNTGALIAMARLCLSRISGVDRPSLAAFW-PT-VKGK  149 (364)
Q Consensus        87 l-------------R~kK~~SSm~~a~~lvk~g~aDa~VSa--GnTGA~la~a~~~lg~i~Gv~RPala~~~-Pt-~~g~  149 (364)
                      +             +..+  .+.+.|++||+.|+||++|+.  ++|..++..+..++|+.+|..+.+...++ |. .++.
T Consensus        90 ~~~r~~~~~~~~a~~~~~--d~~~~Aa~mv~~G~aD~lv~G~~~~~~~~l~~~~~iig~~~~~~~~s~~~~m~~~~~~~~  167 (329)
T d1vmia_          90 WLARAGEKTPPDALEKLT--DPLMFAAAMVSAGKADVCIAGNLSSTANVLRAGLRIIGLQPGCKTLSSIFLMLPQYSGPA  167 (329)
T ss_dssp             HHHHHGGGCCTTHHHHTT--SHHHHHHHHHHTTSCSEEEECSSSCHHHHHHHHHHHTCBCTTCCCCEEEEEEEESSSCCC
T ss_pred             HHHHHCCCCHHHHHHHHH--CCCEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCE
T ss_conf             999847888999999861--363786665505752178526757789998777740587764210002578741678716


Q ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE---CCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCC
Q ss_conf             5998613277789899999999999999985689996589984---0455555657999999997402457132002345
Q gi|254780498|r  150 CIILDVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLLN---VGTEEIKGNDVLQESARLLRGECCGAFKYKGFIE  226 (364)
Q Consensus       150 ~vllD~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLLN---iG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniE  226 (364)
                      .++.||+.|++|++++|+++|++.+.+++.+++.+ |||++|+   .|+..+..+..+++|.+++++.. +++.+-|...
T Consensus       168 lf~~D~~vn~~P~~eqla~Ia~~aa~~a~~l~g~~-PkVAlLS~S~~gs~~~~s~~~~~~a~~~~~~~~-~~~~vdGemq  245 (329)
T d1vmia_         168 LGFADCSVVPQPTAAQLADIALASAETWRAITGEE-PRVAMLSFSSNGSARHPCVANVQQATEIVRERA-PKLVVDGELQ  245 (329)
T ss_dssp             EEEESSSSCSSCCHHHHHHHHHHHHHHHHHHHSSC-CEEEEECSCSTTSSCSHHHHHHHHHHHHHHHHC-TTSEEEEEEC
T ss_pred             EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC-CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHC-CCCEEECCCC
T ss_conf             99831577657789999999985899999857743-332246540467776334799999999998238-9967965620


Q ss_pred             HH--------------HCCCCCCCEEEE-CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             54--------------532456838997-551278899998888999999999863222088999999899999999726
Q gi|254780498|r  227 AN--------------DIAKGFVDVIVT-EGFSGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGF  291 (364)
Q Consensus       227 g~--------------~i~~g~~DVvV~-DGFtGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~  291 (364)
                      .+              .-+.|.+||+|. |--+|||..|.++-++.                                  
T Consensus       246 ~D~Al~~~~~~~k~~~s~~~G~AnvLI~Pnl~agNi~yK~l~~~~~----------------------------------  291 (329)
T d1vmia_         246 FDAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIGYKIAQRLGG----------------------------------  291 (329)
T ss_dssp             HHHHHCHHHHHHHCTTCTTTTCCSEEECSSHHHHHHHHHHHHHHHC----------------------------------
T ss_pred             HHHHHCHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCC----------------------------------
T ss_conf             5443077666245899986897998994885887999999999539----------------------------------


Q ss_pred             CHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf             9687087467421614898388998689999999999
Q gi|254780498|r  292 DPRNFNGGVLLGVDGLVVKGHGSSDAKSIFNVLGIAH  328 (364)
Q Consensus       292 d~~~~gGa~llGl~g~vik~HG~s~~~a~~~ai~~a~  328 (364)
                       +. .-|.+|+|+++||+..+.++++..+.|.+-.|.
T Consensus       292 -a~-~iGpil~G~~~Pv~~~sr~~s~~~i~n~~aiaa  326 (329)
T d1vmia_         292 -YR-AVGPLIQGLAAPMHDLSRGCSVQEIIELALVAA  326 (329)
T ss_dssp             -EE-EEEEEEESBSSCEEECCTTCCHHHHHHHHHHHH
T ss_pred             -CE-EECHHHHCCCCCEEECCCCCCHHHHHHHHHHHC
T ss_conf             -82-884344367998797899999999999988741


No 4  
>d1xcoa_ c.77.1.5 (A:) Phosphotransacetylase Pta {Bacillus subtilis [TaxId: 1423]}
Probab=99.96  E-value=3e-26  Score=182.59  Aligned_cols=278  Identities=17%  Similarity=0.206  Sum_probs=214.3

Q ss_pred             CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHH
Q ss_conf             13898239999746877781777999999998579917999789899999986269751557997785201778306799
Q gi|254780498|r    7 LQGGNVDTISLDLMGGDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVSIAMDERPADA   86 (364)
Q Consensus         7 ~~~~~m~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~vI~mde~P~~A   86 (364)
                      +-.++..||.+ +=|-   -+.+++++..+.++. -.+.+|+|++++|+..+++.+++.+.++|+++...-.. +.....
T Consensus        12 kak~~~krIV~-~Ege---D~rvL~Aa~~~~~~g-i~~pILiG~~~~I~~~a~~~gl~l~~ieIidp~~~~~~-~~~~~~   85 (324)
T d1xcoa_          12 KVAGKDVKIVF-PEGL---DERILEAVSKLAGNK-VLNPIVIGNENEIQAKAKELNLTLGGVKIYDPHTYEGM-EDLVQA   85 (324)
T ss_dssp             HHTTSCCEEEE-SCTT---CHHHHHHHHHHHHTT-SSEEEEESCHHHHHHHHHTTTBCCTTCEEECTTTCTTH-HHHHHH
T ss_pred             HHHCCCCEEEE-ECCC---CHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHCCCCCCCCEEECCCCCHHH-HHHHHH
T ss_conf             98539998997-0879---989999999999869-86899987999999999986998555577788851667-999999


Q ss_pred             ---HHHCCCC---------HHHHHHHHHHHCCCCEEEEEEC--CHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCEEE
Q ss_conf             ---9713764---------2799999998549953999706--4267888887532255676322001105588984599
Q gi|254780498|r   87 ---LRRGRNV---------SSMWRAIEAVKKNQAASVVTAG--NTGALIAMARLCLSRISGVDRPSLAAFWPTVKGKCII  152 (364)
Q Consensus        87 ---lR~kK~~---------SSm~~a~~lvk~g~aDa~VSaG--nTGA~la~a~~~lg~i~Gv~RPala~~~Pt~~g~~vl  152 (364)
                         .|+++..         ...+.|..||+.|++|++++..  +|..++.....++|..+|+.+.+-...+|+.++..++
T Consensus        86 ~~~~rk~~~~~~~a~~~~~~~~~~a~~mv~~G~aD~lv~G~~~~~~~~l~~~l~~ig~~~g~~~~s~~~~~~~~~~~l~~  165 (324)
T d1xcoa_          86 FVERRKGKATEEQARKALLDENYFGTMLVYKGLADGLVSGAAHSTADTVRPALQIIKTKEGVKKTSGVFIMARGEEQYVF  165 (324)
T ss_dssp             HHHHTTTSSCHHHHHHHTTSHHHHHHHHHHTTSCSEEEECTTSCHHHHHHHHHHTSCBCTTCCCCEEEEEEEETTEEEEE
T ss_pred             HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCHHHCEEEEEECCCCCCCCCCCCEEEECCCCCCEEE
T ss_conf             88775167719999987210478989998615301135512203422310467640588985334433333058872799


Q ss_pred             EECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC---CCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHH
Q ss_conf             86132777898999999999999999856899965899840---455555657999999997402457132002345545
Q gi|254780498|r  153 LDVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLLNV---GTEEIKGNDVLQESARLLRGECCGAFKYKGFIEAND  229 (364)
Q Consensus       153 lD~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLLNi---G~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~~  229 (364)
                      .||+.|++|++++|+++|+.....+| .+|++ |||++|+.   |+..+.-+...+++.+++++.. +++.|-|..-.+-
T Consensus       166 tD~~vn~~P~~e~la~Ia~~aa~~ar-~lg~e-PkVA~LS~s~~gs~~~~~~~~~~~a~~~~~~~~-~~~~vdG~lq~D~  242 (324)
T d1xcoa_         166 ADCAINIAPDSQDLAEIAIESANTAK-MFDIE-PRVAMLSFSTKGSAKSDETEKVADAVKIAKEKA-PELTLDGEFQFDA  242 (324)
T ss_dssp             ECSSSCSSCCHHHHHHHHHHHHHHHH-HTTCC-CCEEEECSSSTTSSCSHHHHHHHHHHHHHHHHC-TTSCEEEEECHHH
T ss_pred             ECCEEEECCCHHHHHHHHHHHHHHHH-HHCCC-CCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCCEECCCCCHHH
T ss_conf             78730778899999999999999998-73435-540002115677988730157899999986408-8731326630542


Q ss_pred             --------------CCCCCCCEEEECCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf             --------------32456838997551-278899998888999999999863222088999999899999999726968
Q gi|254780498|r  230 --------------IAKGFVDVIVTEGF-SGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFDPR  294 (364)
Q Consensus       230 --------------i~~g~~DVvV~DGF-tGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d~~  294 (364)
                                    -+.|.+||+|.-.. +|||..|...-                                    +-.-
T Consensus       243 Al~~~~a~~k~~~s~v~G~AnvlI~P~l~agNi~yK~l~~------------------------------------~~~a  286 (324)
T d1xcoa_         243 AFVPSVAEKKAPDSEIKGDANVFVFPSLEAGNIGYKIAQR------------------------------------LGNF  286 (324)
T ss_dssp             HHCHHHHHHHCCSSSCSSCCSEEECSSHHHHHHHHHHHHH------------------------------------TTTC
T ss_pred             CCCHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHH------------------------------------HCCC
T ss_conf             0287666311777656787998994880786999999998------------------------------------4498


Q ss_pred             HCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf             70874674216148983889986899999999999
Q gi|254780498|r  295 NFNGGVLLGVDGLVVKGHGSSDAKSIFNVLGIAHN  329 (364)
Q Consensus       295 ~~gGa~llGl~g~vik~HG~s~~~a~~~ai~~a~~  329 (364)
                      ..-|.+|.|++.||+....++++..+.|.+-.|.-
T Consensus       287 ~~~Gpil~G~~~Pv~~~sr~~s~~~i~n~~aia~~  321 (324)
T d1xcoa_         287 EAVGPILQGLNMPVNDLSRGCNAEDVYNLALITAA  321 (324)
T ss_dssp             EEEEEEEESBSSCEEECCTTCCHHHHHHHHHHHHH
T ss_pred             EEECCHHHCCCCCEEECCCCCCHHHHHHHHHHHHH
T ss_conf             38760644679987978999998999999999999


No 5  
>d1r5ja_ c.77.1.5 (A:) Phosphotransacetylase Pta {Streptococcus pyogenes [TaxId: 1314]}
Probab=99.95  E-value=2.7e-26  Score=182.83  Aligned_cols=283  Identities=17%  Similarity=0.223  Sum_probs=214.3

Q ss_pred             CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCH--H
Q ss_conf             11389823999974687778177799999999857991799978989999998626975155799778520177830--6
Q gi|254780498|r    6 VLQGGNVDTISLDLMGGDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVSIAMDER--P   83 (364)
Q Consensus         6 ~~~~~~m~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~vI~mde~--P   83 (364)
                      -+-.++..||.+ +-|-|   +.+++++..+.++. -.+.+|+|++++|+..+++.++..+.++|+|+.+....++-  .
T Consensus        12 ~k~~~~~krIvf-aEgeD---~rvl~Aa~~~~~~g-i~~pILvG~~~~I~~~~~~~gl~~~~ieIid~~~~~~~~~~~~~   86 (329)
T d1r5ja_          12 EKILGKNMKIVF-PEGND---ERVVRAAARLKFEG-LLEPIILGQSEEVRNLLTKLGFADQDYTIINPNEYADFDKMKEA   86 (329)
T ss_dssp             HHHTTSCCEEEE-SCSSC---HHHHHHHHHHHTTT-SCEEEEBSCHHHHHHHHHHTTCCCSSCCCBCSSSCTTHHHHHHH
T ss_pred             HHHHHCCCEEEE-CCCCC---HHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHH
T ss_conf             998538998997-18899---89999999999879-86899977999999999976999546555466767889999999


Q ss_pred             HHHHHHCCCC---------HHHHHHHHHHHCCCCEEEEEEC--CHHHHHHHHHHHCCCCCCCCCCCHHHC--CCCCCCCE
Q ss_conf             7999713764---------2799999998549953999706--426788888753225567632200110--55889845
Q gi|254780498|r   84 ADALRRGRNV---------SSMWRAIEAVKKNQAASVVTAG--NTGALIAMARLCLSRISGVDRPSLAAF--WPTVKGKC  150 (364)
Q Consensus        84 ~~AlR~kK~~---------SSm~~a~~lvk~g~aDa~VSaG--nTGA~la~a~~~lg~i~Gv~RPala~~--~Pt~~g~~  150 (364)
                      ...+|+++..         ...+.|++||+.|++|++|+..  +|..++...+.++++.||..+.+...+  +|+.++..
T Consensus        87 ~~~~rk~~~~~~~a~~~~~d~~~~a~~mv~~G~aD~~v~G~~~~t~~~lr~~l~~i~~~~~~~~~s~~~~~~~~~~~~~l  166 (329)
T d1r5ja_          87 FVEVRKGKATLEDADKMLRDVNYFGVMLVKMGLADGMVSGAIHSTADTVRPALQIIKTKPGISRTSGVFLMNRENTSERY  166 (329)
T ss_dssp             HHHHHTTTCCHHHHHHHTTSHHHHHHHHHHTTSCSEEEECSSSCSHHHHHHHHHSSCBCTTCSSCEEEEEEEEGGGTEEE
T ss_pred             HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHEEECCCCCCCCCCHHEEEEECCCCCCEE
T ss_conf             99987278729999999751678899999759741254130001577533310003576532110002444124666438


Q ss_pred             EEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC---CCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCH
Q ss_conf             9986132777898999999999999999856899965899840---4555556579999999974024571320023455
Q gi|254780498|r  151 IILDVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLLNV---GTEEIKGNDVLQESARLLRGECCGAFKYKGFIEA  227 (364)
Q Consensus       151 vllD~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLLNi---G~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg  227 (364)
                      ++.||+.|++|++++|+++|+.....+| .+|++ |||++|+.   |+..+--.+.+++|.+++++. .+++.+-|-.-.
T Consensus       167 ~~tD~avn~~P~~eqla~Ia~~aa~~ar-~lg~e-PkVAlLS~S~~gs~~~~s~~~~~~a~~~~~~~-~~~~~vdGelq~  243 (329)
T d1r5ja_         167 VFADCAINIDPTAQELAEIAVNTAETAK-IFDID-PKIAMLSFSTKGSGKAPQVDKVREATEIATGL-NPDLALDGELQF  243 (329)
T ss_dssp             EESCSSSCSSCCHHHHHHHHHHHHHHHH-HTTCC-CCEEEECSCSTTSSCSHHHHHHHHHHHHHHHH-CTTSCEEEEECH
T ss_pred             EEECCEEECCCCHHHHHHHHHHHHHHHH-HHCCC-CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHH-CCCCCCCCCCHH
T ss_conf             9723521148888999999999999998-61756-62576520567896420178999999999976-889543653117


Q ss_pred             H--------------HCCCCCCCEEEECCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             4--------------532456838997551-2788999988889999999998632220889999998999999997269
Q gi|254780498|r  228 N--------------DIAKGFVDVIVTEGF-SGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEGFD  292 (364)
Q Consensus       228 ~--------------~i~~g~~DVvV~DGF-tGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~~d  292 (364)
                      +              .-+.|.+||+|.-.. +|||.-|...-                                    +.
T Consensus       244 D~Al~~~~a~~K~~~s~v~G~AnvLIfPnl~agNi~yK~l~~------------------------------------l~  287 (329)
T d1r5ja_         244 DAAFVPETAAIKAPDSAVAGQANTFVFPDLQSGNIGYKIAQR------------------------------------LG  287 (329)
T ss_dssp             HHHHCHHHHHHHSCSCSSTTCCCEEECSSHHHHHHHHHHHHH------------------------------------TT
T ss_pred             HHHHCHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHH------------------------------------HC
T ss_conf             776466655321788765788998990884787999999998------------------------------------34


Q ss_pred             HHHCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf             6870874674216148983889986899999999999996
Q gi|254780498|r  293 PRNFNGGVLLGVDGLVVKGHGSSDAKSIFNVLGIAHNMSQ  332 (364)
Q Consensus       293 ~~~~gGa~llGl~g~vik~HG~s~~~a~~~ai~~a~~~~~  332 (364)
                      --..-|.+|+|++.||+...-++++..+.|.+-.+.-.++
T Consensus       288 ~~~~iGpil~G~~~Pv~~~sr~~s~~di~~~~aiaa~~A~  327 (329)
T d1r5ja_         288 MFDAIGPILQGLNKPVNDLSRGSSAEDIYKLAIITAAQAI  327 (329)
T ss_dssp             CCEEEEEEEESBSSCEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred             CCEEECCHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf             9808740544789987978999998999999999999985


No 6  
>d2af4c1 c.77.1.5 (C:2-333) Phosphotransacetylase Pta {Methanosarcina thermophila [TaxId: 2210]}
Probab=99.95  E-value=4e-25  Score=175.48  Aligned_cols=278  Identities=15%  Similarity=0.171  Sum_probs=206.1

Q ss_pred             CCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHH---HH
Q ss_conf             982399997468777817779999999985799179997898999999862697515579977852017783067---99
Q gi|254780498|r   10 GNVDTISLDLMGGDLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKERSCFHHCEVSIAMDERPA---DA   86 (364)
Q Consensus        10 ~~m~kIAVDaMGGD~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~vI~mde~P~---~A   86 (364)
                      ++..||.+ +=|-   -+.+++++..+.++. -.+.+|+|++++|+..+++.++  +.++|+++.+.-.. +...   ..
T Consensus        13 ~~~krIvf-~Eg~---D~rvL~Aa~~~~~~g-i~~pILiG~~~~I~~~~~~l~l--~~~~iIdp~~~~~~-~~y~~~~~~   84 (332)
T d2af4c1          13 KLNKTIAL-PETE---DIRTLQAAAKILERG-IADIVLVGNEADIKALAGDLDL--SKAKIVDPKTYEKK-DEYINAFYE   84 (332)
T ss_dssp             HHCCEEEE-CCTT---SHHHHHHHHHHHHHT-SCEEEEESCHHHHHHHHSSCCC--TTSEEECTTSCTTH-HHHHHHHHH
T ss_pred             HCCCEEEE-CCCC---CHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHCCC--CCCEEECCCCCCHH-HHHHHHHHH
T ss_conf             48998998-6879---989999999999869-9069998799999999985899--86768787421026-789999999


Q ss_pred             HHHCCC----------CHHHHHHHHHHHCCCCEEEEEEC--CHHHHHHHHHHHCCCCCCCCCCCHHHCC--CC----CCC
Q ss_conf             971376----------42799999998549953999706--4267888887532255676322001105--58----898
Q gi|254780498|r   87 LRRGRN----------VSSMWRAIEAVKKNQAASVVTAG--NTGALIAMARLCLSRISGVDRPSLAAFW--PT----VKG  148 (364)
Q Consensus        87 lR~kK~----------~SSm~~a~~lvk~g~aDa~VSaG--nTGA~la~a~~~lg~i~Gv~RPala~~~--Pt----~~g  148 (364)
                      +|++|+          ....+.|++||+.|++|++|+..  +|..++..++.++|+.+|..+.+...+|  |+    .++
T Consensus        85 ~r~~KG~~~~~A~~~~~~~~~~a~~mV~~G~aD~lv~G~~~~t~~~lr~~l~~ig~~~~~~~~s~~~i~~~p~~~~~~~~  164 (332)
T d2af4c1          85 LRKHKGITLENAAEIMSDYVYFAVMMAKLGEVDGVVSGAAHSSSDTLRPAVQIVKTAKGAALASAFFIISVPDCEYGSDG  164 (332)
T ss_dssp             HHGGGTCCHHHHHHHTTSHHHHHHHHHHTTSCSEEEECTTSCSHHHHHHHHHHTCBSTTCSCCEEEEEEECTTCCSTBTT
T ss_pred             HHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCCHHEEECCCCCCHHHHHHHHHEEECCCCCCCCCEEEEEECCCCCCCCCC
T ss_conf             87445999999998740025999999976972003413445738876655520103222334652699970344567786


Q ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE---CCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCC
Q ss_conf             45998613277789899999999999999985689996589984---045555565799999999740245713200234
Q gi|254780498|r  149 KCIILDVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLLN---VGTEEIKGNDVLQESARLLRGECCGAFKYKGFI  225 (364)
Q Consensus       149 ~~vllD~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLLN---iG~E~~KG~~~~kea~~LL~~~~~~~~nF~Gni  225 (364)
                      ..++.||+.|++|++++|+++|...+..++.+ +++.|||+||+   .|+..+.-+..++++.+++++. .+++.+-|-.
T Consensus       165 ~l~~tD~avn~~P~~eqla~Ia~~aa~~~~~~-g~~~PkVAlLS~s~~gs~~~~~~~~~~~a~~~~~~~-~~~~~vdGem  242 (332)
T d2af4c1         165 TFLFADSGMVEMPSVEDVANIAVISAKTFELL-VQDVPKVAMLSYSTKGSAKSKLTEATIASTKLAQEL-APDIAIDGEL  242 (332)
T ss_dssp             EEEEETSSSCSSCCHHHHHHHHHHHHHHHHHH-HCSCCEEEEECSCSTTSCCSHHHHHHHHHHHHHHHH-CTTSEEEEEE
T ss_pred             EEEEECCCCEECCCHHHHHHHHHHHHHHHHHC-CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH-CCCCEECCCH
T ss_conf             39984653310876899999999999999861-244550567751256798772046679999998604-8892241520


Q ss_pred             CHH--------------HCCCCCCCEEEECC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             554--------------53245683899755-127889999888899999999986322208899999989999999972
Q gi|254780498|r  226 EAN--------------DIAKGFVDVIVTEG-FSGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKKSLREVKEG  290 (364)
Q Consensus       226 Eg~--------------~i~~g~~DVvV~DG-FtGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~~l~~~~~~  290 (364)
                      -.+              .-+.|.+||+|.-- =+|||.-|...                                    .
T Consensus       243 q~D~Al~~~~a~~k~~~s~v~G~AnvLIfPnl~agNi~yK~l~------------------------------------~  286 (332)
T d2af4c1         243 QVDAAIVPKVAASKAPGSPVAGKANVFIFPDLNCGNIAYKIAQ------------------------------------R  286 (332)
T ss_dssp             CHHHHHCHHHHHHHSTTCSSTTSCCEEECSSHHHHHHHHHHHH------------------------------------H
T ss_pred             HHHHCCCHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHH------------------------------------H
T ss_conf             2422138877874189997789899899488178689999999------------------------------------8


Q ss_pred             CCHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHC
Q ss_conf             6968708746742161489838899868999999999999960
Q gi|254780498|r  291 FDPRNFNGGVLLGVDGLVVKGHGSSDAKSIFNVLGIAHNMSQN  333 (364)
Q Consensus       291 ~d~~~~gGa~llGl~g~vik~HG~s~~~a~~~ai~~a~~~~~~  333 (364)
                      +---..-|.+|+|++.||+....+++...+.|.+-.+.-..+.
T Consensus       287 ~~~a~~~Gpil~G~~~Pv~~~sR~~s~~~i~~~~alaa~~A~~  329 (332)
T d2af4c1         287 LAKAEAYGPITQGLAKPINDLSRGCSDEDIVGAVAITCVQAAA  329 (332)
T ss_dssp             TSCCEEEEEEEESBSSCEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             HCCCEEECCHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             4398487504326899878789999989999999999999874


No 7  
>d1ptma_ c.77.1.3 (A:) 4-hydroxythreonine-4-phosphate dehydrogenase PdxA {Escherichia coli [TaxId: 562]}
Probab=98.58  E-value=8.1e-06  Score=53.71  Aligned_cols=266  Identities=15%  Similarity=0.159  Sum_probs=155.7

Q ss_pred             EEEEEEECCCC--CCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCC----------------EEEECC
Q ss_conf             23999974687--778177799999999857991799978989999998626975155----------------799778
Q gi|254780498|r   12 VDTISLDLMGG--DLGARDLILGASKFLEAHPRIRFLMYGDAKVCLPILDSHPLLKER----------------SCFHHC   73 (364)
Q Consensus        12 m~kIAVDaMGG--D~~P~~vi~Ga~~al~~~~~i~iiLvGdee~I~~~l~~~~~~~~r----------------i~Ii~a   73 (364)
                      -.||+| .||=  --||+.+++.    +++....+++++||.+.++......+...+.                +.+++.
T Consensus         4 ~krIaI-T~GDPaGIGPEIilK~----~~~~~~~~~ivigd~~~l~~~~~~l~~~~~i~~i~~~~~~~~~~~~~l~i~~~   78 (329)
T d1ptma_           4 TQRVVI-TPGEPAGIGPDLVVQL----AQREWPVELVVCADATLLTNRAAMLGLPLTLRPYSPNSPAQPQTAGTLTLLPV   78 (329)
T ss_dssp             CCEEEE-ECCSTTSSHHHHHHHH----TTSCCSSEEEEEECHHHHHHHHHHTTCCCEEEECCTTSCCCCCCTTEEEEEEC
T ss_pred             CCEEEE-ECCCCCHHHHHHHHHH----HHHCCCCCEEEEECHHHHHHHHHHCCCCCEEEECCCCHHHHHCCCCCCCCCCC
T ss_conf             986999-8278607489999999----85168998799989999999999849996278868722320012543123540


Q ss_pred             CC--CCCCCC---HHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEC-CHHHHHHHHH------HHCCCCCCCCCCCHHH
Q ss_conf             52--017783---0679997137642799999998549953999706-4267888887------5322556763220011
Q gi|254780498|r   74 EV--SIAMDE---RPADALRRGRNVSSMWRAIEAVKKNQAASVVTAG-NTGALIAMAR------LCLSRISGVDRPSLAA  141 (364)
Q Consensus        74 ~~--vI~mde---~P~~AlR~kK~~SSm~~a~~lvk~g~aDa~VSaG-nTGA~la~a~------~~lg~i~Gv~RPala~  141 (364)
                      ..  -+....   ....+.     -.|+..|++++++|++||+|.+= |--++..++.      -+|...-+...+. |-
T Consensus        79 ~~~~~~~~G~~~~~~g~~a-----~~~l~~A~~~~~~g~~~alVT~PInK~~i~~ag~~f~GHTE~La~~~~~~~~~-Mm  152 (329)
T d1ptma_          79 ALRAPVTAGQLAVENGHYV-----VETLARACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVV-MM  152 (329)
T ss_dssp             CCSSCCBTTBCCTTHHHHH-----HHHHHHHHHHHHHTSCSEEEECCCCHHHHHHTTCCCCCHHHHHHHHTTCSCCE-EE
T ss_pred             HHCCCCCCCCCCCCHHHHH-----HHHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCCCCEEEEEHHCCCCCCCHH-HH
T ss_conf             0001223344321000378-----99999999998638765143174044555313776431541000022355268-88


Q ss_pred             CCCCCCCCEEEE-------ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEE--E--CCCCCCCCCHH---HHHH
Q ss_conf             055889845998-------61327778989999999999999998568999658998--4--04555556579---9999
Q gi|254780498|r  142 FWPTVKGKCIIL-------DVGATIGSTVSHMVQLSILGSFFARSVAGINCPSIGLL--N--VGTEEIKGNDV---LQES  207 (364)
Q Consensus       142 ~~Pt~~g~~vll-------D~GAN~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLL--N--iG~E~~KG~~~---~kea  207 (364)
                      ++ +.+=.++++       |+-.  .-+.+.+.+--..-....+.-+|+++||+|++  |  -|+.-.-|+|.   +.-|
T Consensus       153 l~-~~~L~V~~vTtHipLk~V~~--~it~~~i~~~i~~~~~~l~~~~gi~~PrIaV~gLNPHaGE~G~~G~EE~~ii~Pa  229 (329)
T d1ptma_         153 LA-TEELRVALATTHLPLRDIAD--AITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPV  229 (329)
T ss_dssp             EE-SSSCEEEESSCSSCGGGHHH--HCCHHHHHHHHHHHHHHHHHTTCCSSCEEEEECSSGGGGGGGTTCSHHHHTHHHH
T ss_pred             HH-HHHHHEEEEEECCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHH
T ss_conf             77-64420011011202555554--2106889999999999999851985400257511654220011014556778889


Q ss_pred             HHHHHHCCCCCCCEECCCCHHHCCC----CCCCEEEECC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf             9997402457132002345545324----5683899755-1278899998888999999999863222088999999899
Q gi|254780498|r  208 ARLLRGECCGAFKYKGFIEANDIAK----GFVDVIVTEG-FSGNIAIKAAEGAVRHISGVLQKSLNRTLLSRIGCLLIKK  282 (364)
Q Consensus       208 ~~LL~~~~~~~~nF~GniEg~~i~~----g~~DVvV~DG-FtGNi~LKt~EG~~~~~~~~lk~~~~~~~~~~~~~~l~~~  282 (364)
                      -+.|++.   .++..|.+=++-+|.    ++.|+|||== =.|=|.+|+.                              
T Consensus       230 i~~~~~~---gi~v~GP~paDt~F~~~~~~~~D~vvamYHDQglip~K~~------------------------------  276 (329)
T d1ptma_         230 LNELRAQ---GMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQ------------------------------  276 (329)
T ss_dssp             HHHHHHT---TCEEEEEECHHHHSSHHHHTTCSEEEESSHHHHHHHHHTT------------------------------
T ss_pred             HHHHHHC---CCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHC------------------------------
T ss_conf             9999866---9554799886024545422774189886243100555541------------------------------


Q ss_pred             HHHHHHHHCCHHHCCCEEEEEECCEEE-EEC---------CCCCHHHHHHHHHHHHHHHHCC
Q ss_conf             999999726968708746742161489-838---------8998689999999999999607
Q gi|254780498|r  283 SLREVKEGFDPRNFNGGVLLGVDGLVV-KGH---------GSSDAKSIFNVLGIAHNMSQNG  334 (364)
Q Consensus       283 ~l~~~~~~~d~~~~gGa~llGl~g~vi-k~H---------G~s~~~a~~~ai~~a~~~~~~~  334 (364)
                               +. ..+=-+-|||.=+-. -.|         |.++..++.+||+.|.+++++.
T Consensus       277 ---------~f-~~~vn~tlGLp~irtSpdHGTA~dIagk~~A~~~s~~~ai~~a~~~~~~~  328 (329)
T d1ptma_         277 ---------GF-GRGVNITLGLPFIRTSVDHGTALELAGRGKADVGSFITALNLAIKMIVNT  328 (329)
T ss_dssp             ---------CS-SSCEEEEESSSSEEEECSSCCCGGGTTSSCCCCHHHHHHHHHHHHHHHHH
T ss_pred             ---------CC-CCEEEEECCCCCEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf             ---------45-64079843899127689987224343789899699999999999998617


No 8  
>d1qgoa_ c.92.1.2 (A:) Cobalt chelatase CbiK {Salmonella typhimurium [TaxId: 90371]}
Probab=69.41  E-value=2.7  Score=18.84  Aligned_cols=33  Identities=15%  Similarity=0.200  Sum_probs=15.1

Q ss_pred             EEEECCCCCC--CCHHHHHHHHHHHHH-CCCCEEEE
Q ss_conf             9997468777--817779999999985-79917999
Q gi|254780498|r   15 ISLDLMGGDL--GARDLILGASKFLEA-HPRIRFLM   47 (364)
Q Consensus        15 IAVDaMGGD~--~P~~vi~Ga~~al~~-~~~i~iiL   47 (364)
                      |-+=..|.-.  +.+.++++....+++ .|+..+..
T Consensus         4 illv~fGs~~~e~~~~~i~~i~~~v~~~~Pd~~V~~   39 (257)
T d1qgoa_           4 LLVVSFGTSYHDTCEKNIVACERDLAASCPDRDLFR   39 (257)
T ss_dssp             EEEEECCCSCHHHHHHHHHHHHHHHHHTCTTSEEEE
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             999958999656699999999999999888991885


No 9  
>d1kzyc2 c.15.1.4 (C:1867-1972) 53BP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.08  E-value=1.8  Score=20.05  Aligned_cols=27  Identities=33%  Similarity=0.437  Sum_probs=20.7

Q ss_pred             CHHHCCCCCCCEEEECC-HHHHHHHHHH
Q ss_conf             55453245683899755-1278899998
Q gi|254780498|r  226 EANDIAKGFVDVIVTEG-FSGNIAIKAA  252 (364)
Q Consensus       226 Eg~~i~~g~~DVvV~DG-FtGNi~LKt~  252 (364)
                      +-.|+..+.+||+|||+ |...++.+..
T Consensus        42 ~~sd~~~~~~DVvvTD~scp~~vl~~a~   69 (106)
T d1kzyc2          42 HNKDIALGVFDVVVTDPSCPASVLKCAE   69 (106)
T ss_dssp             SCCCSCGGGCSEEEECTTCCHHHHHHHH
T ss_pred             HHCCCCCCCCCEEEECCCCCHHHHHHHH
T ss_conf             2224764436589967989899999988


No 10 
>d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]}
Probab=55.18  E-value=4  Score=17.78  Aligned_cols=108  Identities=19%  Similarity=0.317  Sum_probs=61.1

Q ss_pred             HHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             99998549953999706426788888753225567632200110558898459986132777898999999999999999
Q gi|254780498|r   99 AIEAVKKNQAASVVTAGNTGALIAMARLCLSRISGVDRPSLAAFWPTVKGKCIILDVGATIGSTVSHMVQLSILGSFFAR  178 (364)
Q Consensus        99 a~~lvk~g~aDa~VSaGnTGA~la~a~~~lg~i~Gv~RPala~~~Pt~~g~~vllD~GAN~d~~~~~L~qfA~mGs~yak  178 (364)
                      +-+.+.++.+|.++|.|.|++++.-.         ++-|-            +      .+..+.-++++      +..+
T Consensus        43 ~~~~~~~~~~DviISRG~ta~~ir~~---------~~iPV------------V------~I~vs~~Dil~------al~~   89 (186)
T d2pjua1          43 IRKKLANERCDAIIAAGSNGAYLKSR---------LSVPV------------I------LIKPSGYDVLQ------FLAK   89 (186)
T ss_dssp             HHHHTTTSCCSEEEEEHHHHHHHHTT---------CSSCE------------E------EECCCHHHHHH------HHHH
T ss_pred             HHHHHHCCCCCEEEECCHHHHHHHHH---------CCCCE------------E------EECCCHHHHHH------HHHH
T ss_conf             99998708998999796389999986---------89987------------9------97088768999------9999


Q ss_pred             HHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHC---C----CCCCCEEEECCHHHHHHH
Q ss_conf             8568999658998404555556579999999974024571320023455453---2----456838997551278899
Q gi|254780498|r  179 SVAGINCPSIGLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFIEANDI---A----KGFVDVIVTEGFSGNIAI  249 (364)
Q Consensus       179 ~~~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~~i---~----~g~~DVvV~DGFtGNi~L  249 (364)
                      .  ...++|||+.+.+. -   ..-.+.-.++|.-    ++.+.=+....|+   .    ..-+||||+|+.+-+.+-
T Consensus        90 a--~~~~~kiavV~~~~-~---~~~~~~~~~ll~~----~i~~~~~~~~~e~~~~v~~l~~~G~~vVVG~~~~~~~A~  157 (186)
T d2pjua1          90 A--GKLTSSIGVVTYQE-T---IPALVAFQKTFNL----RLDQRSYITEEDARGQINELKANGTEAVVGAGLITDLAE  157 (186)
T ss_dssp             T--TCTTSCEEEEEESS-C---CHHHHHHHHHHTC----CEEEEEESSHHHHHHHHHHHHHTTCCEEEESHHHHHHHH
T ss_pred             H--HHHCCCEEEEECCC-C---CHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHHCCCCEEECCHHHHHHHH
T ss_conf             9--97589789991776-2---5699999999599----648999638899999999999879989999859999999


No 11 
>d2ja9a2 d.51.1.1 (A:152-236) Ribosomal RNA-processing protein 40, RRP40 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=51.93  E-value=4.5  Score=17.45  Aligned_cols=58  Identities=17%  Similarity=0.250  Sum_probs=37.8

Q ss_pred             HHHHHHHHCCHHHCCCEEEEEECCEE-EEECCCCCHHHHHHHHHHHH-HHHHCCHHHHHHHHHHH
Q ss_conf             99999972696870874674216148-98388998689999999999-99960706899999999
Q gi|254780498|r  283 SLREVKEGFDPRNFNGGVLLGVDGLV-VKGHGSSDAKSIFNVLGIAH-NMSQNGFIDMVKDDMQR  345 (364)
Q Consensus       283 ~l~~~~~~~d~~~~gGa~llGl~g~v-ik~HG~s~~~a~~~ai~~a~-~~~~~~~~~~i~~~~~~  345 (364)
                      .++.+++.++     --+..|.||-| |++.-.-+..++.+||+.+. +....++-+.+++.|++
T Consensus        23 ml~~l~~~~~-----~eI~VG~NGrIWi~~~~~~~~i~i~~aI~~~e~~~~~~~~~~~vk~~l~e   82 (85)
T d2ja9a2          23 LLKVLAAHTK-----FEVAIGLNGKIWVKCEELSNTLACYRTIMECCQKNDTAAFKDIAKRQFKE   82 (85)
T ss_dssp             HHHHHHTTCC-----CEEEEETTTEEEEECSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTTT
T ss_pred             HHHHHHHHCC-----CEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf             9999874369-----06999448689997898888999999999999867776799999999999


No 12 
>d1su7a_ e.26.1.2 (A:) Ni-containing carbon monoxide dehydrogenase {Carboxydothermus hydrogenoformans [TaxId: 129958]}
Probab=43.50  E-value=8.4  Score=15.75  Aligned_cols=86  Identities=14%  Similarity=0.196  Sum_probs=49.5

Q ss_pred             CCCCCCHHHHHHHH-HH----------HHHHHHHHCCCCCCEEEEEECCCCCCC-------CC------HH---HHHHHH
Q ss_conf             27778989999999-99----------999999856899965899840455555-------65------79---999999
Q gi|254780498|r  157 ATIGSTVSHMVQLS-IL----------GSFFARSVAGINCPSIGLLNVGTEEIK-------GN------DV---LQESAR  209 (364)
Q Consensus       157 AN~d~~~~~L~qfA-~m----------Gs~yak~~~~~~~PrVgLLNiG~E~~K-------G~------~~---~kea~~  209 (364)
                      -|.|.+|.+|..-+ .+          +....-.+||.+.|+..-.|.|+=+.+       |.      .+   .+|-.+
T Consensus       196 tg~d~D~~~l~~~~lr~glad~~g~~l~~~~~di~fG~P~p~~~~v~lGvl~~d~vnIlV~GH~p~l~~~iv~~~~e~~~  275 (633)
T d1su7a_         196 MGCDADAQNLLLGGLRCSLADLAGCYMGTDLADILFGTPAPVVTESNLGVLKADAVNVAVHGHNPVLSDIIVSVSKEMEN  275 (633)
T ss_dssp             TTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEESGGGCCTTSEEEEEESSCHHHHHHHHHHHHHTHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf             18888999999999998851358999999988985589987055235553269986699989985178999999899999


Q ss_pred             HHHHCCCCCCCEECCCC-H-----------------HH--CCCCCCCEEEECC
Q ss_conf             97402457132002345-5-----------------45--3245683899755
Q gi|254780498|r  210 LLRGECCGAFKYKGFIE-A-----------------ND--IAKGFVDVIVTEG  242 (364)
Q Consensus       210 LL~~~~~~~~nF~GniE-g-----------------~~--i~~g~~DVvV~DG  242 (364)
                      ++++.....||.+|-+. |                 .+  +++|.+|++|.|-
T Consensus       276 ~ak~~ga~GI~v~G~cCTg~E~l~r~g~p~~~n~~~~E~~~~tGavD~~vvD~  328 (633)
T d1su7a_         276 EARAAGATGINVVGICCTGNEVLMRHGIPACTHSVSQEMAMITGALDAMILDY  328 (633)
T ss_dssp             HHHHTTSSCEEEEEEHHHHHHHHHHHCCCEEECGGGHHHHHHTSCEEEEEECS
T ss_pred             HHHHCCCCCEEEEEEECCHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEC
T ss_conf             99974799649998615688876225875233848878864679875499855


No 13 
>d1wu2a3 c.57.1.2 (A:181-324) MoeA, central domain {Pyrococcus horikoshii, PH1647 [TaxId: 53953]}
Probab=41.58  E-value=5.9  Score=16.74  Aligned_cols=12  Identities=17%  Similarity=0.399  Sum_probs=6.9

Q ss_pred             CCEEEEEECCHH
Q ss_conf             953999706426
Q gi|254780498|r  107 QAASVVTAGNTG  118 (364)
Q Consensus       107 ~aDa~VSaGnTG  118 (364)
                      ++|.+|+.|-|+
T Consensus        70 ~~DlvIttGG~s   81 (144)
T d1wu2a3          70 ECDIVLITGGSA   81 (144)
T ss_dssp             CSEEEECC----
T ss_pred             CCCEEEECCCCC
T ss_conf             056898716644


No 14 
>d1je0a_ c.56.2.1 (A:) 5'-deoxy-5'-methylthioadenosine phosphorylase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=34.09  E-value=10  Score=15.25  Aligned_cols=73  Identities=19%  Similarity=0.211  Sum_probs=37.0

Q ss_pred             EEEEECCHHHHHHHHHHCCCCCCCEEEE-CCCCCCCC----CCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCHH
Q ss_conf             7999789899999986269751557997-78520177----830679997137642799999998549953999706426
Q gi|254780498|r   44 RFLMYGDAKVCLPILDSHPLLKERSCFH-HCEVSIAM----DERPADALRRGRNVSSMWRAIEAVKKNQAASVVTAGNTG  118 (364)
Q Consensus        44 ~iiLvGdee~I~~~l~~~~~~~~ri~Ii-~a~~vI~m----de~P~~AlR~kK~~SSm~~a~~lvk~g~aDa~VSaGnTG  118 (364)
                      .++++||+++.+.+ +++  . +..+++ +..++...    +-.|...+...-+..|...+++.+..-.++.++..|..|
T Consensus        14 ~vi~~Gdp~r~~~i-a~~--l-d~~~~~~~~r~~~~~~G~~~g~~v~v~~~GiG~~~aa~~~~el~~~g~~~iI~~GtaG   89 (234)
T d1je0a_          14 RVLVVGDPGRARLL-STL--L-QNPKLTNENRGFLVYTGKYNGETVSIATHGIGGPSIAIVLEELAMLGANVFIRYGTTG   89 (234)
T ss_dssp             EEEEESCHHHHHHH-GGG--S-EEEEEEECGGGCCEEEEEETTEEEEEEECCSSHHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred             EEEECCCHHHHHHH-HHH--H-CCCEEEECCCCCEEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf             59947997999999-997--1-7876852358818999999107999995787678899999999745984899971024


Q ss_pred             HH
Q ss_conf             78
Q gi|254780498|r  119 AL  120 (364)
Q Consensus       119 A~  120 (364)
                      ++
T Consensus        90 ~l   91 (234)
T d1je0a_          90 AL   91 (234)
T ss_dssp             EC
T ss_pred             CC
T ss_conf             46


No 15 
>d1odka_ c.56.2.1 (A:) Purine nucleoside phosphorylase, PNP {Thermus thermophilus [TaxId: 274]}
Probab=33.42  E-value=9.3  Score=15.49  Aligned_cols=97  Identities=18%  Similarity=0.202  Sum_probs=46.6

Q ss_pred             EEEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCC----CCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCHHH
Q ss_conf             799978989999998626975155799778520177----8306799971376427999999985499539997064267
Q gi|254780498|r   44 RFLMYGDAKVCLPILDSHPLLKERSCFHHCEVSIAM----DERPADALRRGRNVSSMWRAIEAVKKNQAASVVTAGNTGA  119 (364)
Q Consensus        44 ~iiLvGdee~I~~~l~~~~~~~~ri~Ii~a~~vI~m----de~P~~AlR~kK~~SSm~~a~~lvk~g~aDa~VSaGnTGA  119 (364)
                      .++++||+++.+.+.+.+-  .+...+-+..++-..    +.+|.......=+..|...+++.+.+-.++.++..|.+|+
T Consensus        15 ~vi~~Gdp~R~~~ia~~~~--~~~~~~~~~r~~~~~~G~~~g~~v~~~~~GiG~~~aa~~~~~l~~~g~~~iI~~Gt~G~   92 (234)
T d1odka_          15 RVLLPGDPGRAEWIAKTFL--QNPRRYNDHRGLWGYTGLYKGVPVSVQTTGMGTPSAAIVVEELVRLGARVLVRVGTAGA   92 (234)
T ss_dssp             EEEECSCHHHHHHHHHHHC--EEEEEEECGGGCCEEEEEETTEEEEEECCCSSHHHHHHHHHHHHHTTCCEEEEEEEEEE
T ss_pred             EEEECCCHHHHHHHHHHHH--HCCEEEECCCCEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCC
T ss_conf             6996899799999999874--08699730277489999998879999976867203557776653379848999536566


Q ss_pred             HHHHHHHHCCCCCCCCCCCHHHCCCCC-CCCEEEEECCCCCCCCHH
Q ss_conf             888887532255676322001105588-984599861327778989
Q gi|254780498|r  120 LIAMARLCLSRISGVDRPSLAAFWPTV-KGKCIILDVGATIGSTVS  164 (364)
Q Consensus       120 ~la~a~~~lg~i~Gv~RPala~~~Pt~-~g~~vllD~GAN~d~~~~  164 (364)
                      +-                      |.. -|..++.+....-|.++.
T Consensus        93 l~----------------------~~~~~gdvVi~~~~~~~d~~~~  116 (234)
T d1odka_          93 AS----------------------SDLAPGELIVAQGAVPLDGTTR  116 (234)
T ss_dssp             SS----------------------TTSCTTCEEEEEEEEEESHHHH
T ss_pred             CC----------------------CCCCCCEEEEECCCCCCCCCHH
T ss_conf             66----------------------0014781798300003556312


No 16 
>d1jqka_ e.26.1.2 (A:) Ni-containing carbon monoxide dehydrogenase {Rhodospirillum rubrum [TaxId: 1085]}
Probab=31.60  E-value=13  Score=14.56  Aligned_cols=86  Identities=10%  Similarity=0.220  Sum_probs=49.1

Q ss_pred             CCCCCCHHHHHHHHH-----------HHHHHHHHHCCCCCCEEEEEECCCC--CCCC-----CH------HHHHH----H
Q ss_conf             277789899999999-----------9999999856899965899840455--5556-----57------99999----9
Q gi|254780498|r  157 ATIGSTVSHMVQLSI-----------LGSFFARSVAGINCPSIGLLNVGTE--EIKG-----ND------VLQES----A  208 (364)
Q Consensus       157 AN~d~~~~~L~qfA~-----------mGs~yak~~~~~~~PrVgLLNiG~E--~~KG-----~~------~~kea----~  208 (364)
                      .|.|.++++|..-+.           +.....-.+||.+.|...-.|+|+=  +.+.     .+      ++..+    .
T Consensus       176 ~g~d~d~~~l~~~aL~~G~~~~~~m~l~d~~~~~~fG~P~p~~v~~~lGvl~~~~~nIlV~GH~p~l~~~i~~~~~~~~~  255 (610)
T d1jqka_         176 VGCDADPTNLILGGLRVAMADLDGSMLATELSDALFGTPQPVVSAANLGVMKRGAVNIAVNGHNPMLSDIICDVAADLRD  255 (610)
T ss_dssp             TTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEESSCCCCTTEEEEEEESSCHHHHHHHHHHHHHTTT
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
T ss_conf             58999999999999998765578999999988874599986277146654468886799978970378999987666999


Q ss_pred             HHHHHCCCCCCCEECCC-CHH-------------------HCCCCCCCEEEECC
Q ss_conf             99740245713200234-554-------------------53245683899755
Q gi|254780498|r  209 RLLRGECCGAFKYKGFI-EAN-------------------DIAKGFVDVIVTEG  242 (364)
Q Consensus       209 ~LL~~~~~~~~nF~Gni-Eg~-------------------~i~~g~~DVvV~DG  242 (364)
                      +++++.....||.+|-+ .+.                   .+|+|.+|++|.|-
T Consensus       256 ~~~~~~~a~GInvyG~cCT~~Eml~~hg~p~~gn~~~~e~~~~tG~~d~iv~d~  309 (610)
T d1jqka_         256 EAIAAGAAEGINIIGICCTGHEVMMRHGVPLATNYLSQELPILTGALEAMVVDV  309 (610)
T ss_dssp             HHHHTTCTTEEEEEEEHHHHHHHHHHSCCCEEECSTTTTHHHHTTCCCEEEECS
T ss_pred             HHHHHCCCCCEEEEEEECCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEC
T ss_conf             999863789728997625578876614872124689988999738997299857


No 17 
>d1gmla_ c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musculus), gamma chain [TaxId: 10090]}
Probab=31.30  E-value=13  Score=14.53  Aligned_cols=65  Identities=29%  Similarity=0.297  Sum_probs=37.8

Q ss_pred             CCCCCEEEEEECCCCCCCCCHHHH-------HHHHHHHHCCCCCCCEECCCCHHHCCCCCCCEEEECCHHHHHHHHH
Q ss_conf             899965899840455555657999-------9999974024571320023455453245683899755127889999
Q gi|254780498|r  182 GINCPSIGLLNVGTEEIKGNDVLQ-------ESARLLRGECCGAFKYKGFIEANDIAKGFVDVIVTEGFSGNIAIKA  251 (364)
Q Consensus       182 ~~~~PrVgLLNiG~E~~KG~~~~k-------ea~~LL~~~~~~~~nF~GniEg~~i~~g~~DVvV~DGFtGNi~LKt  251 (364)
                      .+++|||+|||.+-|..|.....+       +-.+.+++..    +|.-+. -+.|..-.+|||+|-+=....++..
T Consensus        22 ~i~~~kIlll~~~le~~~~~~~~~i~i~~~~~l~~~~~~E~----~~l~~~-v~~I~~~g~~vv~~~~~I~~~a~~~   93 (168)
T d1gmla_          22 YIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEE----EYIHQL-CEDIIQLKPDVVITEKGISDLAQHY   93 (168)
T ss_dssp             EEESCCEEEESSCBSCC--------------CHHHHHHHHH----HHHHHH-HHHHHTTCCSEEEESSCBCHHHHHH
T ss_pred             CCCCCEEEEEECCCCCCCCCCCCCEECCCHHHHHHHHHHHH----HHHHHH-HHHHHHCCCCEEEECCCCCHHHHHH
T ss_conf             46786599993321232112445130389999999999999----999999-9999853876698727787899999


No 18 
>d1q3qa2 c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]}
Probab=30.39  E-value=14  Score=14.44  Aligned_cols=58  Identities=19%  Similarity=0.283  Sum_probs=34.0

Q ss_pred             CCCCCCEEEEEECCCCCCCCCH--------------HHHHHHHHHHHCCCCCCCEECCCCHHHCCCCCCCEEEECCHHHH
Q ss_conf             6899965899840455555657--------------99999999740245713200234554532456838997551278
Q gi|254780498|r  181 AGINCPSIGLLNVGTEEIKGND--------------VLQESARLLRGECCGAFKYKGFIEANDIAKGFVDVIVTEGFSGN  246 (364)
Q Consensus       181 ~~~~~PrVgLLNiG~E~~KG~~--------------~~kea~~LL~~~~~~~~nF~GniEg~~i~~g~~DVvV~DGFtGN  246 (364)
                      -.+++|||+|||.+-|..|...              +.++--+.+++       .     -..|..-.+|||+|-+=...
T Consensus        16 ~~i~n~kIlll~~~Le~~k~~~~~~i~i~~~~~l~~~~~~E~~~l~~-------~-----v~~I~~~g~nvvl~~k~I~~   83 (153)
T d1q3qa2          16 KRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKD-------M-----VDHIAQTGANVVFVQKGIDD   83 (153)
T ss_dssp             SEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHH-------H-----HHHHHHHTCCEEEESSCBCH
T ss_pred             CCCCCCCEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHH-------H-----HHHHHCCCCCCEEECCCCCH
T ss_conf             52378609999265241211356447756999999999999999999-------9-----98775148651462377737


Q ss_pred             HHHH
Q ss_conf             8999
Q gi|254780498|r  247 IAIK  250 (364)
Q Consensus       247 i~LK  250 (364)
                      .++.
T Consensus        84 ~a~~   87 (153)
T d1q3qa2          84 LAQH   87 (153)
T ss_dssp             HHHH
T ss_pred             HHHH
T ss_conf             9999


No 19 
>d1uz5a3 c.57.1.2 (A:181-328) MoeA, central domain {Archaeon Pyrococcus horikoshii, PH0582 [TaxId: 53953]}
Probab=29.43  E-value=11  Score=14.94  Aligned_cols=84  Identities=19%  Similarity=0.236  Sum_probs=32.7

Q ss_pred             HHHHHHHHHCCCCEEEEEECCHHH----HHHHHHHHCCC--CCCCC-CCCHHHCCCCCCCCEEEEECCCCCCCCHHHHHH
Q ss_conf             999999985499539997064267----88888753225--56763-220011055889845998613277789899999
Q gi|254780498|r   96 MWRAIEAVKKNQAASVVTAGNTGA----LIAMARLCLSR--ISGVD-RPSLAAFWPTVKGKCIILDVGATIGSTVSHMVQ  168 (364)
Q Consensus        96 m~~a~~lvk~g~aDa~VSaGnTGA----~la~a~~~lg~--i~Gv~-RPala~~~Pt~~g~~vllD~GAN~d~~~~~L~q  168 (364)
                      +..+++...+ ++|.+|+.|-|+.    ++..+..-+|.  .+|+. ||+=...+-..++..++ -+=.|+   ..-++.
T Consensus        56 i~~~i~~~~~-~~DliIttGG~s~g~~D~~~~~l~~~g~~~~~~v~i~PG~p~~~g~~~~~~v~-~LPG~P---~s~~~~  130 (148)
T d1uz5a3          56 LKALIEKAVN-VGDVVVISGGASGGTKDLTASVIEELGEVKVHGIAIQPGKPTIIGVIKGKPVF-GLPGYP---TSCLTN  130 (148)
T ss_dssp             HHHHHHHHHH-HCSEEEEECCC-----CHHHHHHHHHSEEEEECBSEESCTTCEEEEETTEEEE-EECSSH---HHHHHH
T ss_pred             HHHHHHHHHC-CCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCEEEE-ECCCCH---HHHHHH
T ss_conf             8899986413-46689987875554146799999981822504668872374255225987999-878987---999999


Q ss_pred             HHHHHHHHHHHHCCCC
Q ss_conf             9999999999856899
Q gi|254780498|r  169 LSILGSFFARSVAGIN  184 (364)
Q Consensus       169 fA~mGs~yak~~~~~~  184 (364)
                      |-.+-.-+-+.+.|.+
T Consensus       131 ~~~~v~P~l~~~~G~~  146 (148)
T d1uz5a3         131 FTLLVVPLLLRALGRE  146 (148)
T ss_dssp             HHHHHHHHHHHHTTCS
T ss_pred             HHHHHHHHHHHHCCCC
T ss_conf             9999999999976887


No 20 
>d2ftsa3 c.57.1.2 (A:499-653) Gephyrin, domain 5 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=28.96  E-value=10  Score=15.17  Aligned_cols=77  Identities=22%  Similarity=0.176  Sum_probs=36.7

Q ss_pred             CCEEEEEECCHHH----HHHHHHHH--CCCC--CCCC----CCCHHHCCCCC-CCCEEEEECCCCCCCCHHHHHHHHHHH
Q ss_conf             9539997064267----88888753--2255--6763----22001105588-984599861327778989999999999
Q gi|254780498|r  107 QAASVVTAGNTGA----LIAMARLC--LSRI--SGVD----RPSLAAFWPTV-KGKCIILDVGATIGSTVSHMVQLSILG  173 (364)
Q Consensus       107 ~aDa~VSaGnTGA----~la~a~~~--lg~i--~Gv~----RPala~~~Pt~-~g~~vllD~GAN~d~~~~~L~qfA~mG  173 (364)
                      ++|.+|+.|-||.    ++..++-.  -+++  .++.    ||.....+... .+..++.==|    ....-++.|-.+-
T Consensus        66 ~~DliittGG~s~g~~D~~~~~l~~~~~~~~~f~~v~~~PG~p~~~g~~~~~~~~~~v~~LPG----~P~a~~~~~~~~v  141 (155)
T d2ftsa3          66 RADVIITSGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPG----NPVSAVVTCNLFV  141 (155)
T ss_dssp             HCSEEEEESCCSSSCCHHHHHHHHTTTCCEEEESEEECBSCTTCEEEEEEETTEEEEEEEECS----SHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEECHHHHHHCCHHHEEECCCCCCCCEEEECCC----CCHHHHHHHHHHH
T ss_conf             467799834666774045599997302303553213443022212243145788765897799----8099999999999


Q ss_pred             HHHHHHHCCCCCCE
Q ss_conf             99999856899965
Q gi|254780498|r  174 SFFARSVAGINCPS  187 (364)
Q Consensus       174 s~yak~~~~~~~Pr  187 (364)
                      .-+-+.+.|+..||
T Consensus       142 ~P~l~~l~G~~~pr  155 (155)
T d2ftsa3         142 VPALRKMQGILDPR  155 (155)
T ss_dssp             HHHHHHHTTCSSCC
T ss_pred             HHHHHHHCCCCCCC
T ss_conf             99999974999999


No 21 
>d1qe5a_ c.56.2.1 (A:) Purine nucleoside phosphorylase, PNP {Cellulomonas sp. [TaxId: 40001]}
Probab=28.64  E-value=15  Score=14.25  Aligned_cols=25  Identities=8%  Similarity=0.167  Sum_probs=13.5

Q ss_pred             CCHHHHHHHHHHHHHC-----CCCEEEEECC
Q ss_conf             8177799999999857-----9917999789
Q gi|254780498|r   25 GARDLILGASKFLEAH-----PRIRFLMYGD   50 (364)
Q Consensus        25 ~P~~vi~Ga~~al~~~-----~~i~iiLvGd   50 (364)
                      .|-+.++.+..++.+.     |++-++| |.
T Consensus         9 ~~~~~~~~aa~~i~~~~g~~~p~i~iIl-GS   38 (266)
T d1qe5a_           9 DPFLVARAAADHIAQATGVEGHDMALVL-GS   38 (266)
T ss_dssp             CHHHHHHHHHHHHHHHHCCSCCSEEEEC-CT
T ss_pred             CHHHHHHHHHHHHHHHCCCCCCCEEEEE-CC
T ss_conf             9899999999999997199999899991-68


No 22 
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=25.24  E-value=17  Score=13.86  Aligned_cols=76  Identities=12%  Similarity=0.139  Sum_probs=39.9

Q ss_pred             CCC-CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHCC--
Q ss_conf             132-77789899999999999999985689996589984045555565799999999740245713200234554532--
Q gi|254780498|r  155 VGA-TIGSTVSHMVQLSILGSFFARSVAGINCPSIGLLNVGTEEIKGNDVLQESARLLRGECCGAFKYKGFIEANDIA--  231 (364)
Q Consensus       155 ~GA-N~d~~~~~L~qfA~mGs~yak~~~~~~~PrVgLLNiG~E~~KG~~~~kea~~LL~~~~~~~~nF~GniEg~~i~--  231 (364)
                      +|- .++=.++.+++.+       +.+-   +-+.-+  +|.-. .++.. ++-.+.+++....++.|.|++...++.  
T Consensus        18 iGrl~~~K~~~~~i~a~-------~~l~---~~~l~i--vg~~~-~~~~~-~~~~~~~~~~~~~~v~~~g~~~~~~~~~~   83 (166)
T d2f9fa1          18 VNRIYPEKRIELQLEVF-------KKLQ---DEKLYI--VGWFS-KGDHA-ERYARKIMKIAPDNVKFLGSVSEEELIDL   83 (166)
T ss_dssp             ECCSSGGGTHHHHHHHH-------HHCT---TSCEEE--EBCCC-TTSTH-HHHHHHHHHHSCTTEEEEESCCHHHHHHH
T ss_pred             EECCCCCCCHHHHHHHH-------HHHC---CCEEEE--EEECC-CCCCH-HHHHHHHCCCCCCCEEEEECCCCCCCCCC
T ss_conf             92375434999999999-------9833---974999--97224-45422-33332202356675887421221112222


Q ss_pred             CCCCCEEEECCHH
Q ss_conf             4568389975512
Q gi|254780498|r  232 KGFVDVIVTEGFS  244 (364)
Q Consensus       232 ~g~~DVvV~DGFt  244 (364)
                      -..+||+|+=...
T Consensus        84 ~~~ad~~i~ps~~   96 (166)
T d2f9fa1          84 YSRCKGLLCTAKD   96 (166)
T ss_dssp             HHHCSEEEECCSS
T ss_pred             CCCCCCCCCCCCC
T ss_conf             2222223321221


No 23 
>d2uube1 d.14.1.1 (E:74-154) Ribosomal protein S5, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=23.33  E-value=18  Score=13.67  Aligned_cols=33  Identities=24%  Similarity=0.209  Sum_probs=26.0

Q ss_pred             EEEECCEEEEECCCCCHHHHHHHHHHHHHHHHC
Q ss_conf             742161489838899868999999999999960
Q gi|254780498|r  301 LLGVDGLVVKGHGSSDAKSIFNVLGIAHNMSQN  333 (364)
Q Consensus       301 llGl~g~vik~HG~s~~~a~~~ai~~a~~~~~~  333 (364)
                      +.|++-+..|++|+.++.-+..|...|-...+.
T Consensus        39 laGIkDi~~K~~GS~N~~N~vkAt~~aL~~~~t   71 (81)
T d2uube1          39 LAGVTDILTKELGSRNPINIAYATMEALRQLRT   71 (81)
T ss_dssp             HTTCCSEEEEEEECCCHHHHHHHHHHHHHHCCC
T ss_pred             HHCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf             808215412048999789999999999992799


No 24 
>d2nn6g3 d.51.1.1 (G:195-274) Ribosomal RNA-processing protein 40, RRP40 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.40  E-value=8.6  Score=15.71  Aligned_cols=44  Identities=20%  Similarity=0.401  Sum_probs=31.2

Q ss_pred             HHHHHHHHCCHHHCCCEEEEEECCEE-EEECCCCCHHHHHHHHHHHHHHH
Q ss_conf             99999972696870874674216148-98388998689999999999999
Q gi|254780498|r  283 SLREVKEGFDPRNFNGGVLLGVDGLV-VKGHGSSDAKSIFNVLGIAHNMS  331 (364)
Q Consensus       283 ~l~~~~~~~d~~~~gGa~llGl~g~v-ik~HG~s~~~a~~~ai~~a~~~~  331 (364)
                      .|+.+.+++-++     +-.|+||-| |+++--.+..++.|+|..+..+-
T Consensus        22 vL~~Lgk~~~FE-----IavG~NGrVWvk~~~~~~ti~i~~aI~~~e~~~   66 (80)
T d2nn6g3          22 IIQEVGKLYPLE-----IVFGMNGRIWVKAKTIQQTLILANILEACEHMT   66 (80)
T ss_dssp             HHHHTTCSSSCC-----CEEETTTEEEECCSSHHHHHHHHHHHHHTTSSC
T ss_pred             HHHHHHHHCCEE-----EEEECCCEEEEECCCHHHHHHHHHHHHHHHCCC
T ss_conf             999985028768-----998358768982898899999999999856599


No 25 
>d1assa_ c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]}
Probab=22.06  E-value=14  Score=14.27  Aligned_cols=64  Identities=16%  Similarity=0.120  Sum_probs=31.7

Q ss_pred             CCCCCEEEEEECCCCCCCCCHHHH-------HHHHHHHHCCCCCCCEECCCCHHHCCCCCCCEEEECCHHHHHHHH
Q ss_conf             899965899840455555657999-------999997402457132002345545324568389975512788999
Q gi|254780498|r  182 GINCPSIGLLNVGTEEIKGNDVLQ-------ESARLLRGECCGAFKYKGFIEANDIAKGFVDVIVTEGFSGNIAIK  250 (364)
Q Consensus       182 ~~~~PrVgLLNiG~E~~KG~~~~k-------ea~~LL~~~~~~~~nF~GniEg~~i~~g~~DVvV~DGFtGNi~LK  250 (364)
                      .+++|||++|+.+-|..|.....+       +-....++..    +|.-+. -..|..-.+|||+|-+=....++.
T Consensus        18 ~i~~~kI~ll~~~Le~~k~~~~~~i~i~~~~~l~~~~~~E~----~~l~~~-v~~I~~~g~nvvl~~~~I~~~a~~   88 (152)
T d1assa_          18 VVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQET----NTFKQM-VEKIKKSGANVVLCQKGIDDVAQH   88 (152)
T ss_dssp             EEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHH----HHHHHH-HHHHHHTTCSEEEESSCBCHHHHH
T ss_pred             CCCCCEEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHH----HHHHHH-HHHHHHCCCCEEEEECCCCHHHHH
T ss_conf             51686299993553413434555054079999999999999----999999-999875156259971563699999


Done!