HHsearch alignment for GI: 254780500 and conserved domain: PRK11548

Probab=99.76  E-value=6.9e-18  Score=128.12  Aligned_cols=93  Identities=16%  Similarity=0.188  Sum_probs=76.6

Q ss_pred             HHHHHHHHHHHCCCCCC------C-EECCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECC
Q ss_conf             99999999984355542------1-0135003878886404899999999983785212244677530488872100000
Q gi|254780500|r   20 ALFIIVIGLVVDYHVSY------G-SISGASLDMSAISLVSQGSSRSHVIESLGSPSFSILHNGNRSQSFYYVSQKKKWF   92 (159)
Q Consensus        20 ~i~~~l~~~~~~~c~~~------~-~~~G~~id~~~i~~i~~g~tk~~V~~~LG~Ps~~~~f~~n~~~~~YYi~~k~~~~   92 (159)
T Consensus         7 ~~a~ll~~lllsgCS~~~~~vYk~dI~QGN~i~~~~v~~L~~GMTk~QV~~iLGtP~l~d~F~~~rWdYvy~~~~g----   82 (113)
T PRK11548          7 TAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTPNDVAKIRVGMTQQQVAYALGTPMMSDPFGTNTWFYVFRQQPG----   82 (113)
T ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEECC----
T ss_conf             9999999999801157877565765575676699999876189999999987189632388788746999999608----


Q ss_pred             CHHCCCCEEEEEEEEEEEECCCCCEEEEEE
Q ss_conf             001012111135789999989986843211
Q gi|254780500|r   93 PVKFLSPKIMEYIVLKITFGEKGVVSSVSM  122 (159)
Q Consensus        93 ~~af~~pkvier~Vl~I~FD~~g~V~nI~~  122 (159)
T Consensus        83 ------~~~~~~~~ltl~Fd~~~ll~~Id~  106 (113)
T PRK11548         83 ------HEKVTQQTLTLTFNSSGVLTNIDN  106 (113)
T ss_pred             ------CCCEEEEEEEEEECCCCCEEECCC
T ss_conf             ------983588899999839997883489