HHsearch alignment for GI: 254780502 and conserved domain: COG1327

>COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains [Transcription].

Probab=94.77  E-value=0.24  Score=28.84  Aligned_cols=75  Identities=19%  Similarity=0.324  Sum_probs=50.1

Q ss_pred             CEEEEECCCCEECCCHHHHHHHHHHHHCCCCCCCHHHH---HHHHHHHCC----CCCCHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf             22898059976025989999999998516666899999---998973037----89888999999999999874418771
Q gi|254780502|r  144 KLKIMMDDGTLISFNSKRLEMIVEEACSGLQDVSSKIV---LSETYKNMY----DGLSESDLETALIFSSRTLIEKEPNY  216 (954)
Q Consensus       144 ~l~V~krDG~~e~~d~~ki~~~i~~ac~gL~~v~~~~i---~~~~~~~ly----dgitt~el~~~li~aA~~Li~~ePdy  216 (954)
T Consensus        48 ~~~VvKkdg~Re~F~r~Kl~~gl~~A~~KR-pVs~e~ie~~v~~ie~~Lr~~g~~EV~S~~IG~~VM~~Lk~l--D~VAY  124 (156)
T COG1327          48 PLIVVKKDGRREPFDREKLRRGLIRACEKR-PVSSEQIEEAVSHIERQLRSSGEREVPSKEIGELVMEELKKL--DEVAY  124 (156)
T ss_pred             CCEEECCCCCCCCCCHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC--CHHHH
T ss_conf             305887589708788899998999998159-999999999999999999866887678899999999999710--50232


Q ss_pred             HHHHH
Q ss_conf             46779
Q gi|254780502|r  217 AKVTA  221 (954)
Q Consensus       217 ~~vAa  221 (954)
T Consensus       125 vRFAS  129 (156)
T COG1327         125 VRFAS  129 (156)
T ss_pred             HHHHH
T ss_conf             34666