HHsearch alignment for GI: 254780502 and conserved domain: PRK07187
>PRK07187 ribonucleotide-diphosphate reductase subunit alpha; Validated.
Probab=100.00 E-value=0 Score=1431.41 Aligned_cols=653 Identities=26% Similarity=0.423 Sum_probs=559.7
Q ss_pred HHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999874-418771467799999999998621003331011044677754788899866557677877775177399999
Q gi|254780502|r 204 FSSRTLI-EKEPNYAKVTARFLLEKLRREVLTTVYKKPQKATHHEMQCLYPEYFCRYIEEGVKARLLHESMMDFDLVYLA 282 (954)
Q Consensus 204 ~aA~~Li-~~ePdy~~vAaRlll~~l~kev~~~~~~~~~~~~~~~~~~~y~~~f~~~i~~G~~~~~i~~~l~~~dl~~L~ 282 (954)
T Consensus 11 ln~~~~~~~~~g~~~~~~d~~a~~~~~~~~v~~~----~-~~---f~s~-~e~~~~l~~~~~y~~~~l~~Y~~e~i~~l~ 81 (722)
T PRK07187 11 LNALTKFKKPDGSYHFDSDKEAVERYLEEHVSPN----Q-MA---FNSL-EEKLAYLVNNNYYEQAILDAYSNDQIKELF 81 (722)
T ss_pred HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH----C-CC---CCCH-HHHHHHHHHCCCCCHHHHHHCCHHHHHHHH
T ss_conf 8778536776886054657999999999973451----4-23---5899-999999997698559999758999999999
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHCCC--CCEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHH
Q ss_conf 7641210112898999999997621148--92753889999999965416454536899999999974330358611222
Q gi|254780502|r 283 NDLKYERDFAFEYLGLQILYDRYFLHIN--GSRIEMPQAFFMRVAMGLALKETEKEKRAVEFYNLLSSFHFMCSTPTLFN 360 (954)
Q Consensus 283 ~~Id~~RD~~F~Y~Gl~tL~~rYllk~~--~~~~E~pQ~~~mrVA~~la~~e~~~~~~~~~~Y~~ls~~~~~~atPtl~N 360 (954)
T Consensus 82 ~~i~~~~~~~~ty~g~~~~~~~Y~lk~~d~~~~~E~~q~~~~~~Al~l~~~---~~~~a~~~~~~~~~~~f~~aTPTl~N 158 (722)
T PRK07187 82 HYAYQQNHRFLNFMGAMKFYNSYALKTFDGKQYLETFEDRAVMNALFLADG---DFTKAFDLLDAILLGRFQPATPTFLN 158 (722)
T ss_pred HHHHHCCCCCCCHHHHHHHHHHHEEEECCCCEEEECHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHCCCCCCCCHHHC
T ss_conf 775133355757477999976335465799957657999999999986378---89999999999983784779972112
Q ss_pred HHCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 1002-222321102547664135899998999998510544410124431112000127876428899999989999974
Q gi|254780502|r 361 SGTR-HPQLSSCFLTTVPDDLYGIFGALQENAMLAKYSGGLGNDWTPVRGLGAHIHGTNGKSQGVIPFLKVANDTAVAVN 439 (954)
Q Consensus 361 agt~-~~qlsSCfl~~v~Dsl~~I~~~~~~~a~isk~ggGiG~~~s~iR~~Gs~I~g~~G~ssG~v~flk~~n~~~~~v~ 439 (954)
T Consensus 159 aG~~~rgqlsSCFl~~v~Dsl~sI~~~~~~~a~lsk~gGGiG~~~s~iR~~Gs~Ikg~~g~ssGvvp~mk~~~~t~~~v~ 238 (722)
T PRK07187 159 AGKKRRGEYVSCYLLRVEDNMESISRAISTSLQLSKRGGGVALCLTNLREIGAPIKGIENQATGIIPVMKLLEDSFSYAN 238 (722)
T ss_pred CCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCEECCEECHHHHHHHHHHHHH
T ss_conf 88899887441683476887799999999999998427766113244266898116768740763019999653744211
Q ss_pred CCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCHHHHHHCCCHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHH
Q ss_conf 04666772478983567889999730257873023320232020348799998521287478710114441001344378
Q gi|254780502|r 440 QGGKRKGAVCAYLETWHIDVEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVTQNAGWTLFSPDEVSDLHDLYGKEFE 519 (954)
Q Consensus 440 QgG~RrGA~~~~l~~wH~Di~eFl~~k~n~G~~~~r~~~~~~av~i~D~Fm~~v~~~~~w~Lf~P~~~~~L~d~~g~~fe 519 (954)
T Consensus 239 QgG~R~GA~avyL~~wH~DI~eFL~~K~~~gde~~R~~~l~~gv~ipDlFmerv~~~~~~~Lf~P~dv~---~~yg~~f~ 315 (722)
T PRK07187 239 QLGQRQGAGAVYLHAHHPDVLTFLDTKRENADEKIRIKSLSLGLVIPDITFELAKENKDMALFSPYDIK---RVYGKPMS 315 (722)
T ss_pred CCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEECCCEEEEEECHHHHHHHHCCCCCEEECCCCHH---HHHCCCCC
T ss_conf 479647515999689716599999851668860003225504655578999999819973200763016---66475311
Q ss_pred -----HHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf -----998778752104886057786688999999999988288127833112022212466703404675200136654
Q gi|254780502|r 520 -----IAYENYERQADRGEIKVFRKISAVALWRKMLTMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNSSS 594 (954)
Q Consensus 520 -----~~Y~~~e~~~~~~~~~~~k~i~A~~l~~~i~~~~~etG~P~i~f~D~~N~~~p~~~~g~I~~sNlC~Ei~l~~~~ 594 (954)
T Consensus 316 d~~~~e~Y~~~~~~---~~i~-k~~I~AreL~~~I~~~~~ETG~Pyi~f~D~vNr~np~~~~G~I~~SNLCtEI~qp~~p 391 (722)
T PRK07187 316 DISITEEYYNLLAN---PAIK-KTYISARKFFQTIAELHFESGYPYILFDDTVNKRNPHAKKGRIVMSNLCSEIAQVSTP 391 (722)
T ss_pred CCHHHHHHHHHHHC---CCCC-CCEECHHHHHHHHHHHHHHHCCCEEEEHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC
T ss_conf 01278999999857---8764-3155299999999999998599548764645544984457814435687551256883
Q ss_pred CC------------CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 43------------3211125540686254344798885589999999976531121-0001888886443310002111
Q gi|254780502|r 595 EE------------TAVCNLGSINLLAHFANNQFDYDKLASTIRTAVRVLDNVIDIN-CHTIEKAKKSNHTHRAIGLGLM 661 (954)
Q Consensus 595 ~e------------~~vCnL~SiNL~~~v~~~~~D~~~l~~~v~~avr~LDnVId~n-~yp~~~~~~~~~~~R~iGlGv~ 661 (954)
T Consensus 392 ~~~~~d~~~~~~G~~v~CNLgSiNL~~~~~~----~~~~~~~v~~avr~LdnV~~~~d~~~~P~~~~~n~~~R~IGLGvm 467 (722)
T PRK07187 392 STFKEDLSFKKIGEDICCNLGSLNIAKAMES----APHFEQLITTSIRALDRVSRVSDLSCAPSIEKGNAANHAVGLGAM 467 (722)
T ss_pred CCCCCCCCHHHCCCEEEEECCHHHHHHHHHC----HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCC
T ss_conf 1013432111136501665317679999725----577999999999999999872277558278998776165542241
Q ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHCCH---------HH
Q ss_conf 188999972963233788999999999985779997898753117788766781213876244663005---------52
Q gi|254780502|r 662 GFQSALHLLHIPYASPEAVEIADESMEFISFHAISASVELAQERGAYSSFKGSLWDQGVFPIDSIGLLA---------EV 732 (954)
Q Consensus 662 Glad~L~~~gi~Y~S~ea~~~~~~i~e~i~~~a~~aS~~LAkErG~~~~f~gS~~~~G~~~~d~~~~~~---------~~ 732 (954)
T Consensus 468 Glh~~Lak~~I~y~S~EA~~~~~~ife~I~y~A~~AS~eLAkErG~f~~F~~S~ya~G~~-f~~y~~~~~~~~~p~~~~v 546 (722)
T PRK07187 468 NLHGFLATNHIYYDSKEAVDFTNLFFYAMAYYAFKASNQLAKEKGAFAGFSLSKYADGSY-FDKYTKEDAKKWTPKTAKV 546 (722)
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC-HHCCCCCCCCCCCCCCHHH
T ss_conf 699999985998699899999999999999999999999999868987877783202763-0002333420025420667
Q ss_pred CC---CCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHEEEEECCCCCEEEECHHHHHH
Q ss_conf 25---334540210272899999998412044301107743687783889884756012034532676136646589998
Q gi|254780502|r 733 RD---ELAMNRTSRLPWDELKKRVKTIGMRNSNCMAIAPTATIANICGVSQSIDPSYQNLYVKSNMSGDFTVVNSFLVNE 809 (954)
Q Consensus 733 ~~---~~~~~~~~~~dW~~Lr~~i~~~G~RNs~l~aiAPT~t~S~i~g~s~gIEP~~a~~y~r~~~~G~~~~vn~~l~~~ 809 (954)
T Consensus 547 ~~l~~~~~~~~pt~~DW~~Lre~Ikk~G~RNs~l~AiAPT~SiS~I~g~T~sIePi~s~i~~rk~~~~~~v~~p~~~--- 623 (722)
T PRK07187 547 KELLQDYGFTIPTQADWQALVEDIKKTGLANAHLLAVAPTGSISYLSSCTPSLQPVVAPVEVRKEGKLGRIYVPAYK--- 623 (722)
T ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHEEECCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCEEECCCCC---
T ss_conf 77775316678732119999999998387733212158822688873878766513354046742655517545433---
Q ss_pred HHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHCCCHHHHHHHHHHHCCHHCCCEEEEEEC-CCCCHHHHHHH
Q ss_conf 99858986899999985199627764488678865052220688999999985206300523204754-89998999999
Q gi|254780502|r 810 LKQRDLWDEAMISDLKYHDGSIGNIERIPDDLKKIHATAFEIDPMWLIESASRRQKWIDQAQSLNLYL-DEPSGKKLDFI 888 (954)
Q Consensus 810 l~~~g~~~~~~~~~i~~~~Gsv~~i~~ip~~~k~~f~ta~ei~~~~~i~~~a~~Q~~IDqsiS~tl~~-~~~t~~~i~~~ 888 (954)
T Consensus 624 --------------------------l~~~~~~~y~~tA~eIdq~~iI~~aA~rQk~IDQsqS~nLf~~~~~t~~dl~~~ 677 (722)
T PRK07187 624 --------------------------IDQDNYAYYERGAYEVGPKPIIDIVAAAQKHVDQAISLTLFMTDQATTRDLNKA 677 (722)
T ss_pred --------------------------CCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHH
T ss_conf --------------------------587778998646100798999999998707566753151234999899999999
Q ss_pred HHHHHHCCCCEEEEECCCCCH
Q ss_conf 999997298679796588411
Q gi|254780502|r 889 YRQAWLMGLKTTYYLRSRSAT 909 (954)
Q Consensus 889 y~~Aw~~GlKt~yy~R~~s~~ 909 (954)
T Consensus 678 ~~~Awk~GlKTlYY~Rtr~~~ 698 (722)
T PRK07187 678 YIQAFKQNCASIYYVRVRQDV 698 (722)
T ss_pred HHHHHHHCCCCCEECCCCCCC
T ss_conf 999998196201262035430