HHsearch alignment for GI: 254780502 and conserved domain: PRK08188
>PRK08188 ribonucleotide-diphosphate reductase subunit alpha; Validated.
Probab=100.00 E-value=0 Score=1490.69 Aligned_cols=658 Identities=28% Similarity=0.422 Sum_probs=575.8
Q ss_pred HHHHHHHHHCC-CCHHHHHHHHHHHH------HHHHHHHHCCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999874418-77146779999999------9998621003331011044677-7547888998665576778777751
Q gi|254780502|r 203 IFSSRTLIEKE-PNYAKVTARFLLEK------LRREVLTTVYKKPQKATHHEMQ-CLYPEYFCRYIEEGVKARLLHESMM 274 (954)
Q Consensus 203 i~aA~~Li~~e-Pdy~~vAaRlll~~------l~kev~~~~~~~~~~~~~~~~~-~~y~~~f~~~i~~G~~~~~i~~~l~ 274 (954)
T Consensus 2 ~~~~~~~~~~~~~~y~~~~a~~~~~~~~g~~~~~~d~~a~~~~~~~~v~~~~~~f~~~~~~~~~l~~~g~y~~~~l~~y~ 81 (714)
T PRK08188 2 ATTTAERLSQETMDYHALNAMLNLYDADGRIQFDKDRQAARQYFLQHVNQNTVFFHSLQEKLDYLVEEGYYEEEVLDQYS 81 (714)
T ss_pred CHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHCC
T ss_conf 30566560845778899998872648778705532399999999987534221145788999999875850299986579
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC-C-CEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 773999997641210112898999999997621148-9-27538899999999654164545368999999999743303
Q gi|254780502|r 275 DFDLVYLANDLKYERDFAFEYLGLQILYDRYFLHIN-G-SRIEMPQAFFMRVAMGLALKETEKEKRAVEFYNLLSSFHFM 352 (954)
Q Consensus 275 ~~dl~~L~~~Id~~RD~~F~Y~Gl~tL~~rYllk~~-~-~~~E~pQ~~~mrVA~~la~~e~~~~~~~~~~Y~~ls~~~~~ 352 (954)
T Consensus 82 ~~~i~~~~~~~~~~~~~~~~y~g~~~~~~~Y~~k~~~~~~~~E~pq~~~m~val~l~~~~---~~~a~~~y~~~s~~~f~ 158 (714)
T PRK08188 82 RNFVKTLFDHAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVCMVALTLAQGD---ETLARQLVDEILSGRFQ 158 (714)
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCEEEECHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHCCCC
T ss_conf 999999999876526751205649999986700327898245568999999998865788---99999999999828846
Q ss_pred CCCCHHHHHHCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 586112221002-2223211025476641358999989999985105444101244311120001278764288999999
Q gi|254780502|r 353 CSTPTLFNSGTR-HPQLSSCFLTTVPDDLYGIFGALQENAMLAKYSGGLGNDWTPVRGLGAHIHGTNGKSQGVIPFLKVA 431 (954)
Q Consensus 353 ~atPtl~Nagt~-~~qlsSCfl~~v~Dsl~~I~~~~~~~a~isk~ggGiG~~~s~iR~~Gs~I~g~~G~ssG~v~flk~~ 431 (954)
T Consensus 159 ~aTPTl~NaG~~~~~qlsSCFll~v~Dsle~I~~t~~~~a~isK~gGGiG~~~s~iR~~Gs~I~g~~g~ssGvvp~mkv~ 238 (714)
T PRK08188 159 PATPTFLNCGKKQRGELVSCFLLRIEDNMESIGRSINSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKML 238 (714)
T ss_pred CCCCHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 58971420899998877626847888888999999999999975267676440046778984068798169701099999
Q ss_pred HHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCHHHHHHCCCHHHCCCHHHHHHHHCCCCEEEEECCCCCCCC
Q ss_conf 89999974046667724789835678899997302578730233202320203487999985212874787101144410
Q gi|254780502|r 432 NDTAVAVNQGGKRKGAVCAYLETWHIDVEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVTQNAGWTLFSPDEVSDLH 511 (954)
Q Consensus 432 n~~~~~v~QgG~RrGA~~~~l~~wH~Di~eFl~~k~n~G~~~~r~~~~~~av~i~D~Fm~~v~~~~~w~Lf~P~~~~~L~ 511 (954)
T Consensus 239 ~~t~~~v~QgG~R~GA~avyL~~wHpDI~eFL~~K~n~gde~~R~~~l~~~v~ipDlFme~v~~~~~~~Lf~P~~~~--- 315 (714)
T PRK08188 239 EDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKENEDMYLFSPYDVE--- 315 (714)
T ss_pred HHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHCCCCEEEECHHHHHHHHCCCCEEEECCCCCH---
T ss_conf 89999986289876713899898744699999863568846764301521101278999977427755972676226---
Q ss_pred CCCCCCHH-----HHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCCCCCEEEECCCCC
Q ss_conf 01344378-----9987787521048860577866889999999999882881278331120222124667034046752
Q gi|254780502|r 512 DLYGKEFE-----IAYENYERQADRGEIKVFRKISAVALWRKMLTMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCT 586 (954)
Q Consensus 512 d~~g~~fe-----~~Y~~~e~~~~~~~~~~~k~i~A~~l~~~i~~~~~etG~P~i~f~D~~N~~~p~~~~g~I~~sNlC~ 586 (954)
T Consensus 316 ~~yg~~f~d~~~~e~y~~~~~~~~i~----k~~i~AreL~~~I~~~~~ETG~Pyi~f~D~~Nr~np~~--G~I~~SNLCt 389 (714)
T PRK08188 316 RVYGKPFADISITEKYDEMVDDARIR----KKKINAREFFQTLAEIQFESGYPYIMFEDTVNRANPIA--GRINMSNLCS 389 (714)
T ss_pred HHCCCCCHHHHHHHHHHHHHHCCCCC----CEEEEHHHHHHHHHHHHHHHCCCEEEEHHHHHHCCCCC--CCCCCCCCCC
T ss_conf 55286300005799999998577744----30762999999999999984896388615343239977--8520134774
Q ss_pred CCCCCCCCCC------------CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHH
Q ss_conf 0013665443------------3211125540686254344798885589999999976531121-00018888864433
Q gi|254780502|r 587 EITLNSSSEE------------TAVCNLGSINLLAHFANNQFDYDKLASTIRTAVRVLDNVIDIN-CHTIEKAKKSNHTH 653 (954)
Q Consensus 587 Ei~l~~~~~e------------~~vCnL~SiNL~~~v~~~~~D~~~l~~~v~~avr~LDnVId~n-~yp~~~~~~~~~~~ 653 (954)
T Consensus 390 EI~q~~~p~~~~~~~~y~~~g~~~~CNLgSiNL~~~-----~d~~~l~~~v~~avr~LdnViD~~~~~pvp~~~~~n~~~ 464 (714)
T PRK08188 390 EILQVNSASEYNEDLSYAHIGKDISCNLGSLNIAHT-----MDSPDFGRTVETAIRALTAVSDMSHIRSVPSIEKGNAAS 464 (714)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHC-----CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
T ss_conf 522468831135554434467600344453102320-----788899999999999999988641368857999988744
Q ss_pred HHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCHHHCCCCCHHHHHCC---
Q ss_conf 10002111188999972963233788999999999985779997898753117-78876678121387624466300---
Q gi|254780502|r 654 RAIGLGLMGFQSALHLLHIPYASPEAVEIADESMEFISFHAISASVELAQERG-AYSSFKGSLWDQGVFPIDSIGLL--- 729 (954)
Q Consensus 654 R~iGlGv~Glad~L~~~gi~Y~S~ea~~~~~~i~e~i~~~a~~aS~~LAkErG-~~~~f~gS~~~~G~~~~d~~~~~--- 729 (954)
T Consensus 465 R~IGLGvmGlad~La~~gI~y~S~EA~~l~~~ife~I~y~A~~AS~eLAkErG~~f~~F~~S~y~~G~~-f~~y~~~~~~ 543 (714)
T PRK08188 465 HAIGLGQMNLHGYLAREGIFYGSEEALDFTNIYFYTVTYHALRASNLLARERGETFKGFEQSKYASGEY-FDKYTQQDWQ 543 (714)
T ss_pred CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC-HHCCCCCCCC
T ss_conf 774425216999999779987999999999999999999999999999998586888878880002662-2103531236
Q ss_pred ---HHHCC---CCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHEEEEECCC-CCEEEE
Q ss_conf ---55225---33454021027289999999841204430110774368778388988475601203453267-613664
Q gi|254780502|r 730 ---AEVRD---ELAMNRTSRLPWDELKKRVKTIGMRNSNCMAIAPTATIANICGVSQSIDPSYQNLYVKSNMS-GDFTVV 802 (954)
Q Consensus 730 ---~~~~~---~~~~~~~~~~dW~~Lr~~i~~~G~RNs~l~aiAPT~t~S~i~g~s~gIEP~~a~~y~r~~~~-G~~~~v 802 (954)
T Consensus 544 p~~~~v~~lf~~~gv~~p~~~dW~~Lr~~I~k~GlRNs~L~AiaPT~SiS~I~g~t~sIePi~s~i~~rk~g~~g~v~~~ 623 (714)
T PRK08188 544 PKTAKVRELFARAGITIPTQEDWAALRDDVMRHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKIEIRKEGKIGRVYYP 623 (714)
T ss_pred CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHEEEECCCCCHHHHCCCCCCCCCCHHHEEEEECCCCCEEEEC
T ss_conf 53046777640157788725559999999987161421002147842189874887542501210046414632048502
Q ss_pred CHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHCCCHHHHHHHHHHHCCHHCCCEEEEEEC-CCCC
Q ss_conf 658999899858986899999985199627764488678865052220688999999985206300523204754-8999
Q gi|254780502|r 803 NSFLVNELKQRDLWDEAMISDLKYHDGSIGNIERIPDDLKKIHATAFEIDPMWLIESASRRQKWIDQAQSLNLYL-DEPS 881 (954)
Q Consensus 803 n~~l~~~l~~~g~~~~~~~~~i~~~~Gsv~~i~~ip~~~k~~f~ta~ei~~~~~i~~~a~~Q~~IDqsiS~tl~~-~~~t 881 (954)
T Consensus 624 ~-------------------------------p~l~~d~~~~yktA~eI~q~~iI~~aA~rQk~IDQsqS~nL~~p~~~t 672 (714)
T PRK08188 624 A-------------------------------PFMTNDNLEYYQDAYEIGPEKIIDTYAAATQHVDQGLSLTLFFPDTAT 672 (714)
T ss_pred C-------------------------------CCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHCCCCEECCCCCC
T ss_conf 7-------------------------------766877887742698489999999999874777511178222389999
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCH
Q ss_conf 8999999999997298679796588411
Q gi|254780502|r 882 GKKLDFIYRQAWLMGLKTTYYLRSRSAT 909 (954)
Q Consensus 882 ~~~i~~~y~~Aw~~GlKt~yy~R~~s~~ 909 (954)
T Consensus 673 ~~dl~~~~~~AWk~GlKTlYY~Rtr~~~ 700 (714)
T PRK08188 673 TRDINKAQIYAWRKGIKTLYYIRLRQMA 700 (714)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCC
T ss_conf 9999999999998196603650035343