HHsearch alignment for GI: 254780502 and conserved domain: PRK08270
>PRK08270 anaerobic ribonucleoside triphosphate reductase; Provisional.
Probab=96.24 E-value=0.051 Score=33.83 Aligned_cols=241 Identities=20% Similarity=0.259 Sum_probs=132.9
Q ss_pred HHHHHHHHHHHHCCCEEE-EECHHHCCCCCCCCCEEEECCCCCCCCCCC------------CCCCCCCCCHHHHHHHHHC
Q ss_conf 999999999882881278-331120222124667034046752001366------------5443321112554068625
Q gi|254780502|r 545 LWRKMLTMLFETGHPWIT-FKDPCNIRSPQQHVGVVHSSNLCTEITLNS------------SSEETAVCNLGSINLLAHF 611 (954)
Q Consensus 545 l~~~i~~~~~etG~P~i~-f~D~~N~~~p~~~~g~I~~sNlC~Ei~l~~------------~~~e~~vCnL~SiNL~~~v 611 (954)
T Consensus 343 ~~d~~~e~tak~~~Pyf~n~~~~--~~~~----~~v~s--MgCR~rld~~e~~~~~gg~fg~~~~tGnlgVvTiNLPRia 414 (681)
T PRK08270 343 NADLLFEMTAKYGLPYFQNFINS--DLKP----EDVRS--MCCRLQLDLRELLKRGGGLFGSAELTGSIGVVTINLPRLG 414 (681)
T ss_pred HHHHHHHHHHHHCCCCHHHHCCC--CCCC----CCCEE--CCCEEECCHHHHHCCCCCCCCCCCCCCCEEEEEEEHHHHH
T ss_conf 79999999987488643544035--5786----55100--4450015607651256753367766674125994057789
Q ss_pred --CC--CCCCHHHHHHHHHHHHHHHH-------HHCCCCCHHHHHHHH-HHHHHHHCCCCHHHHHHHHH-HCCCCCCCHH
Q ss_conf --43--44798885589999999976-------531121000188888-64433100021111889999-7296323378
Q gi|254780502|r 612 --AN--NQFDYDKLASTIRTAVRVLD-------NVIDINCHTIEKAKK-SNHTHRAIGLGLMGFQSALH-LLHIPYASPE 678 (954)
Q Consensus 612 --~~--~~~D~~~l~~~v~~avr~LD-------nVId~n~yp~~~~~~-~~~~~R~iGlGv~Glad~L~-~~gi~Y~S~e 678 (954)
T Consensus 415 ~~a~g~~~f-f~~Ld~~l~l~~~~L~~kr~~~~~~~~~gl~p~~~~~l~~~~~~~s-TIG~iGL~E~~~~~~G~~~~~~e 492 (681)
T PRK08270 415 YLSKGEEEF-FARLDELLELAKDSLEIKRKVIERLTDRGLYPYSKRYLGTLRNHFS-TIGVNGMNEMCRNFTGEDITTEE 492 (681)
T ss_pred HHCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC-EEEHHHHHHHHHHHHCCCCCCHH
T ss_conf 871999999-9999999999999999999999987345788615667777654772-15621399999997199999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCHHHCCCCCHHHHHCCHHHCCCCCCCCHHHCCHHHHHHHHHHHH
Q ss_conf 8999999999985779997898753117-788766781213876244663005522533454021027289999999841
Q gi|254780502|r 679 AVEIADESMEFISFHAISASVELAQERG-AYSSFKGSLWDQGVFPIDSIGLLAEVRDELAMNRTSRLPWDELKKRVKTIG 757 (954)
Q Consensus 679 a~~~~~~i~e~i~~~a~~aS~~LAkErG-~~~~f~gS~~~~G~~~~d~~~~~~~~~~~~~~~~~~~~dW~~Lr~~i~~~G 757 (954)
T Consensus 493 ~~~f~~~Il~~mr~~~~~~~~----e~g~~fsl~-~T-------PAEsl------------------s~Rfa~~D~k~fg 542 (681)
T PRK08270 493 GRAFALRVLDFMRERLVEFQE----ETGNLYNLE-AT-------PAEGT------------------TYRLAKEDKKRYP 542 (681)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HHCCCEEEE-EC-------CCCHH------------------HHHHHHHHHHHCC
T ss_conf 999999999999999999999----879940355-56-------30147------------------8999999899769
Q ss_pred HHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHEEEEECCCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf 20443011077436877838898847560120345326761366465899989985898689999998519962776448
Q gi|254780502|r 758 MRNSNCMAIAPTATIANICGVSQSIDPSYQNLYVKSNMSGDFTVVNSFLVNELKQRDLWDEAMISDLKYHDGSIGNIERI 837 (954)
Q Consensus 758 ~RNs~l~aiAPT~t~S~i~g~s~gIEP~~a~~y~r~~~~G~~~~vn~~l~~~l~~~g~~~~~~~~~i~~~~Gsv~~i~~i 837 (954)
T Consensus 543 ~-------I~-------~~g--~~d~~YYTNS~H~--------------------------------------------- 561 (681)
T PRK08270 543 D-------IL-------QAG--GGDEPYYTNSTQL--------------------------------------------- 561 (681)
T ss_pred C-------CC-------CCC--CCCCCEEECCCCC---------------------------------------------
T ss_conf 8-------64-------568--8888833187147---------------------------------------------
Q ss_pred CHHHHHHCCCHHCCCHHHHHHHHHHHCCHHCCCEEEEEECCC--CCHHHHHHHHHHHHH
Q ss_conf 867886505222068899999998520630052320475489--998999999999997
Q gi|254780502|r 838 PDDLKKIHATAFEIDPMWLIESASRRQKWIDQAQSLNLYLDE--PSGKKLDFIYRQAWL 894 (954)
Q Consensus 838 p~~~k~~f~ta~ei~~~~~i~~~a~~Q~~IDqsiS~tl~~~~--~t~~~i~~~y~~Aw~ 894 (954)
T Consensus 562 --------pV~~~~~~feki~~E~~~~~~~~GG~I~hv~lge~~~n~~a~~~lv~~~~~ 612 (681)
T PRK08270 562 --------PVGFTDDPFEALELQDELQTKYTGGTVLHLYMGEAISSAEACKKLVKKALE 612 (681)
T ss_pred --------CCCCCCCHHHHHHHHCCCCCEECCEEEEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf --------789999988998652223423357069998668878999999999999998