HHsearch alignment for GI: 254780502 and conserved domain: PRK08271

>PRK08271 anaerobic ribonucleoside triphosphate reductase; Provisional.
Probab=97.41  E-value=0.015  Score=37.80  Aligned_cols=197  Identities=18%  Similarity=0.164  Sum_probs=123.9

Q ss_pred             CCCCCHHHHHHHHHCCC----CCCCHHHHHHHHHHHHHHH-------HHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf             32111255406862543----4479888558999999997-------653112100018888864433100021111889
Q gi|254780502|r  597 TAVCNLGSINLLAHFAN----NQFDYDKLASTIRTAVRVL-------DNVIDINCHTIEKAKKSNHTHRAIGLGLMGFQS  665 (954)
Q Consensus       597 ~~vCnL~SiNL~~~v~~----~~~D~~~l~~~v~~avr~L-------DnVId~n~yp~~~~~~~~~~~R~iGlGv~Glad  665 (954)
T Consensus       348 TGSigVVTINLpRla~~a~~e~ef-~~~L~~~l~la~~sLe~kRkil~~~~~~Gl~P~~~~~l~~l~~hFsTIGi~GmnE  426 (625)
T PRK08271        348 IGSINVITINMPRIALEGRDRKKF-FEILREEVKKIHKYLVAYRKIMEERIAAGMLPVYDAGFITLDKQFLTIGINGMWE  426 (625)
T ss_pred             CCCCCEEEECHHHHHHHHCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf             476224996347888882898999-9999999999999999999999999877995367867998862276630405999


Q ss_pred             HHHHCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCHHHCCCCCHHHHHCCHHHCCCCCCCCHHH
Q ss_conf             9997296323-37889999999999857799978987531177-887667812138762446630055225334540210
Q gi|254780502|r  666 ALHLLHIPYA-SPEAVEIADESMEFISFHAISASVELAQERGA-YSSFKGSLWDQGVFPIDSIGLLAEVRDELAMNRTSR  743 (954)
Q Consensus       666 ~L~~~gi~Y~-S~ea~~~~~~i~e~i~~~a~~aS~~LAkErG~-~~~f~gS~~~~G~~~~d~~~~~~~~~~~~~~~~~~~  743 (954)
T Consensus       427 a~~~~g~~~~~~~eg~~fa~~vL~~mr~~~~~~q----eetG~~yNl-EaT-------PAEg----------ts------  478 (625)
T PRK08271        427 AAEFQGLTVGYNEEGEAFVQEVLKVIYEANEEAS----KEYGFTFNT-EFV-------PAEN----------LA------  478 (625)
T ss_pred             HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH----HHHCCCCCE-EEC-------CCCC----------HH------
T ss_conf             9997599878998999999999999999999999----996986524-445-------5561----------45------


Q ss_pred             CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHEEEEECCCCCEEEECHHHHHHHHHCCCCCHHHHHH
Q ss_conf             27289999999841204430110774368778388988475601203453267613664658999899858986899999
Q gi|254780502|r  744 LPWDELKKRVKTIGMRNSNCMAIAPTATIANICGVSQSIDPSYQNLYVKSNMSGDFTVVNSFLVNELKQRDLWDEAMISD  823 (954)
Q Consensus       744 ~dW~~Lr~~i~~~G~RNs~l~aiAPT~t~S~i~g~s~gIEP~~a~~y~r~~~~G~~~~vn~~l~~~l~~~g~~~~~~~~~  823 (954)
T Consensus       479 --~RfAk~Dkk~f~~~----------------------~~py~tys-------------~--------------------  501 (625)
T PRK08271        479 --VTLAKKDRKDYFVE----------------------RDCYNSYS-------------N--------------------  501 (625)
T ss_pred             --HHHHHHHHHHCCCC----------------------CCCCCCCC-------------C--------------------
T ss_conf             --77899989977987----------------------67675676-------------6--------------------


Q ss_pred             HHHCCCCCCCCCCCCHHHHHHCCCHHCCCHHHHHHHHHHHCCHHCCCEEEEEECCC-C-CHHHHHHHHHHHHHCCCC
Q ss_conf             98519962776448867886505222068899999998520630052320475489-9-989999999999972986
Q gi|254780502|r  824 LKYHDGSIGNIERIPDDLKKIHATAFEIDPMWLIESASRRQKWIDQAQSLNLYLDE-P-SGKKLDFIYRQAWLMGLK  898 (954)
Q Consensus       824 i~~~~Gsv~~i~~ip~~~k~~f~ta~ei~~~~~i~~~a~~Q~~IDqsiS~tl~~~~-~-t~~~i~~~y~~Aw~~GlK  898 (954)
T Consensus       502 --------s~lp-----------~~~~~d~fe~l~~q~~lq~~yTGGtVlHi~LgE~~~~~ea~~~lvk~~~~~~lp  559 (625)
T PRK08271        502 --------QYVP-----------LDANTDALDRFKLHGKLDKKVSGGSILHLNLDESLKSEEGYLKLVNIAAKTGVN  559 (625)
T ss_pred             --------CCCC-----------CCCCCCHHHHHHHHCCCCCEECCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf             --------5378-----------889989999997524642224141899976688889999999999999847997