HHsearch alignment for GI: 254780502 and conserved domain: PRK08271
>PRK08271 anaerobic ribonucleoside triphosphate reductase; Provisional.
Probab=97.41 E-value=0.015 Score=37.80 Aligned_cols=197 Identities=18% Similarity=0.164 Sum_probs=123.9
Q ss_pred CCCCCHHHHHHHHHCCC----CCCCHHHHHHHHHHHHHHH-------HHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf 32111255406862543----4479888558999999997-------653112100018888864433100021111889
Q gi|254780502|r 597 TAVCNLGSINLLAHFAN----NQFDYDKLASTIRTAVRVL-------DNVIDINCHTIEKAKKSNHTHRAIGLGLMGFQS 665 (954)
Q Consensus 597 ~~vCnL~SiNL~~~v~~----~~~D~~~l~~~v~~avr~L-------DnVId~n~yp~~~~~~~~~~~R~iGlGv~Glad 665 (954)
T Consensus 348 TGSigVVTINLpRla~~a~~e~ef-~~~L~~~l~la~~sLe~kRkil~~~~~~Gl~P~~~~~l~~l~~hFsTIGi~GmnE 426 (625)
T PRK08271 348 IGSINVITINMPRIALEGRDRKKF-FEILREEVKKIHKYLVAYRKIMEERIAAGMLPVYDAGFITLDKQFLTIGINGMWE 426 (625)
T ss_pred CCCCCEEEECHHHHHHHHCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf 476224996347888882898999-9999999999999999999999999877995367867998862276630405999
Q ss_pred HHHHCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCHHHCCCCCHHHHHCCHHHCCCCCCCCHHH
Q ss_conf 9997296323-37889999999999857799978987531177-887667812138762446630055225334540210
Q gi|254780502|r 666 ALHLLHIPYA-SPEAVEIADESMEFISFHAISASVELAQERGA-YSSFKGSLWDQGVFPIDSIGLLAEVRDELAMNRTSR 743 (954)
Q Consensus 666 ~L~~~gi~Y~-S~ea~~~~~~i~e~i~~~a~~aS~~LAkErG~-~~~f~gS~~~~G~~~~d~~~~~~~~~~~~~~~~~~~ 743 (954)
T Consensus 427 a~~~~g~~~~~~~eg~~fa~~vL~~mr~~~~~~q----eetG~~yNl-EaT-------PAEg----------ts------ 478 (625)
T PRK08271 427 AAEFQGLTVGYNEEGEAFVQEVLKVIYEANEEAS----KEYGFTFNT-EFV-------PAEN----------LA------ 478 (625)
T ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH----HHHCCCCCE-EEC-------CCCC----------HH------
T ss_conf 9997599878998999999999999999999999----996986524-445-------5561----------45------
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHEEEEECCCCCEEEECHHHHHHHHHCCCCCHHHHHH
Q ss_conf 27289999999841204430110774368778388988475601203453267613664658999899858986899999
Q gi|254780502|r 744 LPWDELKKRVKTIGMRNSNCMAIAPTATIANICGVSQSIDPSYQNLYVKSNMSGDFTVVNSFLVNELKQRDLWDEAMISD 823 (954)
Q Consensus 744 ~dW~~Lr~~i~~~G~RNs~l~aiAPT~t~S~i~g~s~gIEP~~a~~y~r~~~~G~~~~vn~~l~~~l~~~g~~~~~~~~~ 823 (954)
T Consensus 479 --~RfAk~Dkk~f~~~----------------------~~py~tys-------------~-------------------- 501 (625)
T PRK08271 479 --VTLAKKDRKDYFVE----------------------RDCYNSYS-------------N-------------------- 501 (625)
T ss_pred --HHHHHHHHHHCCCC----------------------CCCCCCCC-------------C--------------------
T ss_conf --77899989977987----------------------67675676-------------6--------------------
Q ss_pred HHHCCCCCCCCCCCCHHHHHHCCCHHCCCHHHHHHHHHHHCCHHCCCEEEEEECCC-C-CHHHHHHHHHHHHHCCCC
Q ss_conf 98519962776448867886505222068899999998520630052320475489-9-989999999999972986
Q gi|254780502|r 824 LKYHDGSIGNIERIPDDLKKIHATAFEIDPMWLIESASRRQKWIDQAQSLNLYLDE-P-SGKKLDFIYRQAWLMGLK 898 (954)
Q Consensus 824 i~~~~Gsv~~i~~ip~~~k~~f~ta~ei~~~~~i~~~a~~Q~~IDqsiS~tl~~~~-~-t~~~i~~~y~~Aw~~GlK 898 (954)
T Consensus 502 --------s~lp-----------~~~~~d~fe~l~~q~~lq~~yTGGtVlHi~LgE~~~~~ea~~~lvk~~~~~~lp 559 (625)
T PRK08271 502 --------QYVP-----------LDANTDALDRFKLHGKLDKKVSGGSILHLNLDESLKSEEGYLKLVNIAAKTGVN 559 (625)
T ss_pred --------CCCC-----------CCCCCCHHHHHHHHCCCCCEECCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf --------5378-----------889989999997524642224141899976688889999999999999847997